ATP-dependent DNA helicase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G25120 |
| fragaria_vesca | FvH4_7g26710 FvH4_7g26710 FvH4_7g26710 FvH4_7g26710 |
| malus_domestica | MD07G1241600.v1.1 MD07G1241700.v1.1 MD07G1243100.v1.1 MD07G1243600.v1.1 MD07G1244100.v1.1 MD07G1244200.v1.1 MD07G1244300.v1.1 MD07G1244800.v1.1 MD07G1245200.v1.1 MD07G1245700.v1.1 MD07G1245800.v1.1 |
| prunus_persica | Prupe.2G270600_v2.0.a1 Prupe.2G270600_v2.0.a1 |
| pyrus_communis | pycom07g21810 pycom07g21980 |
| rosa_chinensis | RchiOBHm_Chr1g0373301 |
| rosa_laevigata | RLG00000001620 RLG00000006922 RLG00000035899 |
| rosa_multiflora | Rmu_ssc0000435.1_g000004 |
| rosa_roxburghii | Rroxscaffold_4G00284280 |
| rosa_rugosa | Rorug01G0376900 |
| rosa_samantha | Rh1AG385900 Rh1BG350100 Rh1CG363200 Rh1DG380900 Rh3CG316100 Rh5CG053300 Rh5DG386500 |
| rosa_wichuraiana | Rw1G034900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 481 |
| AatII | GACGTC | 1 cut(s) | 2498 |
| Acc36I | ACCTGC | 3 cut(s) | 481, 1678, 3094 |
| Acc65I | GGTACC | 1 cut(s) | 2098 |
| AccB1I | GGYRCC | 1 cut(s) | 2098 |
| AccBSI | CCGCTC | 1 cut(s) | 2323 |
| AccI | GTMKAC | 4 cut(s) | 955, 1435, 1457, 2974 |
| AccII | CGCG | 2 cut(s) | 591, 3218 |
| AclWI | GGATC | 2 cut(s) | 1558, 1837 |
| AcuI | CTGAAG | 5 cut(s) | 543, 1239, 2174, 2769, 3038 |
| AcyI | GRCGYC | 4 cut(s) | 120, 429, 2495, 2515 |
| AdeI | CACNNNGTG | 2 cut(s) | 469, 1595 |
| AfaI | GTAC | 4 cut(s) | 554, 2100, 2195, 3263 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 247, 647, 1582, 1687, 2750 |
| AjnI | CCWGG | 3 cut(s) | 640, 1236, 1813 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1701, 1733 |
| Alw21I | GWGCWC | 4 cut(s) | 281, 1655, 2545, 3103 |
| Alw26I | GTCTC | 1 cut(s) | 576 |
| AlwI | GGATC | 2 cut(s) | 1558, 1837 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 641, 1946 |
| AoxI | GGCC | 2 cut(s) | 638, 1988 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 2337, 2555, 2771, 2855 |
| Asp718I | GGTACC | 1 cut(s) | 2098 |
| AspLEI | GCGC | 7 cut(s) | 490, 591, 765, 850, 870, 1964, 3012 |
| AspS9I | GGNCC | 2 cut(s) | 46, 638 |
| AsuHPI | GGTGA | 5 cut(s) | 505, 1324, 1961, 2032, 2732 |
| AvaII | GGWCC | 1 cut(s) | 46 |
| BanI | GGYRCC | 1 cut(s) | 2098 |
| BanII | GRGCYC | 2 cut(s) | 281, 415 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 516, 548 |
| BauI | CACGAG | 1 cut(s) | 2538 |
| BbsI | GAAGAC | 4 cut(s) | 213, 1696, 2172, 2356 |
| Bbv12I | GWGCWC | 4 cut(s) | 281, 1655, 2545, 3103 |
| BbvCI | CCTCAGC | 2 cut(s) | 171, 1992 |
| BccI | CCATC | 7 cut(s) | 521, 1820, 2138, 2240, 2393, 2397, 3066 |
| BceAI | ACGGC | 3 cut(s) | 43, 107, 190 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 431, 465, 824, 858 |
| BciT130I | CCWGG | 3 cut(s) | 642, 1238, 1815 |
| BclI | TGATCA | 3 cut(s) | 495, 1351, 3091 |
| BcoDI | GTCTC | 1 cut(s) | 576 |
| BfaI | CTAG | 3 cut(s) | 719, 2027, 2781 |
| BfmI | CTRYAG | 6 cut(s) | 416, 633, 735, 1083, 2762, 2802 |
| BfuAI | ACCTGC | 3 cut(s) | 481, 1678, 3094 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 86 |
| BglII | AGATCT | 2 cut(s) | 2180, 2755 |
| BlpI | GCTNAGC | 1 cut(s) | 198 |
| BmcAI | AGTACT | 1 cut(s) | 554 |
| Bme1390I | CCNGG | 3 cut(s) | 642, 1238, 1815 |
| Bme18I | GGWCC | 1 cut(s) | 46 |
| BmgT120I | GGNCC | 2 cut(s) | 46, 638 |
| BmiI | GGNNCC | 2 cut(s) | 2100, 3222 |
| BmrFI | CCNGG | 3 cut(s) | 642, 1238, 1815 |
| BmsI | GCATC | 9 cut(s) | 716, 774, 1015, 1325, 1490, 2583, 2992, 3031, 3099 |
| BpiI | GAAGAC | 4 cut(s) | 213, 1696, 2172, 2356 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 539, 571 |
| BpmI | CTGGAG | 1 cut(s) | 2138 |
| Bpu10I | CCTNAGC | 2 cut(s) | 171, 1992 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 198 |
| BpuEI | CTTGAG | 3 cut(s) | 265, 884, 1986 |
| Bsa29I | ATCGAT | 1 cut(s) | 2136 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1350, 1562 |
| BsaHI | GRCGYC | 4 cut(s) | 120, 429, 2495, 2515 |
| BsaJI | CCNNGG | 3 cut(s) | 25, 84, 3216 |
| BsaWI | WCCGGW | 4 cut(s) | 57, 99, 349, 1680 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1743, 1773, 2327, 2357, 3205, 3235 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 247, 647, 1582, 1687, 2750 |
| Bse118I | RCCGGY | 1 cut(s) | 582 |
| Bse1I | ACTGG | 2 cut(s) | 2205, 2845 |
| Bse3DI | GCAATG | 6 cut(s) | 729, 1111, 1165, 1665, 2538, 3005 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1350, 1562 |
| BseBI | CCWGG | 3 cut(s) | 642, 1238, 1815 |
| BseCI | ATCGAT | 1 cut(s) | 2136 |
| BseDI | CCNNGG | 3 cut(s) | 25, 84, 3216 |
| BseGI | GGATG | 8 cut(s) | 707, 1030, 1823, 2209, 2385, 2656, 2926, 3007 |
| BseJI | GATNNNNATC | 2 cut(s) | 1350, 1562 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 247, 647, 1582, 1687, 2750 |
| BseMI | GCAATG | 6 cut(s) | 729, 1111, 1165, 1665, 2538, 3005 |
| BseNI | ACTGG | 2 cut(s) | 2205, 2845 |
| BseRI | GAGGAG | 4 cut(s) | 48, 563, 999, 2519 |
| BseYI | CCCAGC | 1 cut(s) | 779 |
| BsgI | GTGCAG | 2 cut(s) | 3153, 3196 |
| Bsh1236I | CGCG | 2 cut(s) | 591, 3218 |
| Bsh1285I | CGRYCG | 1 cut(s) | 100 |
| BshFI | GGCC | 2 cut(s) | 640, 1990 |
| BshNI | GGYRCC | 1 cut(s) | 2098 |
| BshVI | ATCGAT | 1 cut(s) | 2136 |
| BsiEI | CGRYCG | 1 cut(s) | 100 |
| BsiHKAI | GWGCWC | 4 cut(s) | 281, 1655, 2545, 3103 |
| BsiSI | CCGG | 6 cut(s) | 58, 100, 350, 545, 583, 1681 |
| BslFI | GGGAC | 2 cut(s) | 2426, 2506 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 247, 647, 1582, 1687, 2750 |
| BsmAI | GTCTC | 1 cut(s) | 576 |
| BsmFI | GGGAC | 2 cut(s) | 2426, 2506 |
| BsmI | GAATGC | 1 cut(s) | 1577 |
| BsnI | GGCC | 2 cut(s) | 640, 1990 |
| Bsp1286I | GDGCHC | 5 cut(s) | 281, 415, 1655, 2545, 3103 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 198 |
| BspANI | GGCC | 2 cut(s) | 640, 1990 |
| BspDI | ATCGAT | 1 cut(s) | 2136 |
| BspFNI | CGCG | 2 cut(s) | 591, 3218 |
| BspHI | TCATGA | 1 cut(s) | 2686 |
| BspLI | GGNNCC | 2 cut(s) | 2100, 3222 |
| BspMAI | CTGCAG | 4 cut(s) | 420, 637, 1087, 2766 |
| BspMI | ACCTGC | 3 cut(s) | 481, 1678, 3094 |
| BspPI | GGATC | 2 cut(s) | 1558, 1837 |
| BspQI | GCTCTTC | 1 cut(s) | 904 |
| BspT107I | GGYRCC | 1 cut(s) | 2098 |
| BsrBI | CCGCTC | 1 cut(s) | 2323 |
| BsrDI | GCAATG | 6 cut(s) | 729, 1111, 1165, 1665, 2538, 3005 |
| BsrFI | RCCGGY | 1 cut(s) | 582 |
| BsrI | ACTGG | 2 cut(s) | 2205, 2845 |
| BssAI | RCCGGY | 1 cut(s) | 582 |
| BssECI | CCNNGG | 3 cut(s) | 25, 84, 3216 |
| BssNI | GRCGYC | 4 cut(s) | 120, 429, 2495, 2515 |
| BssSI | CACGAG | 1 cut(s) | 2538 |
| BssT1I | CCWWGG | 1 cut(s) | 84 |
| Bst2BI | CACGAG | 1 cut(s) | 2538 |
| Bst2UI | CCWGG | 3 cut(s) | 642, 1238, 1815 |
| Bst4CI | ACNGT | 6 cut(s) | 17, 983, 1094, 1544, 2610, 2676 |
| Bst6I | CTCTTC | 4 cut(s) | 904, 981, 1502, 1979 |
| BstACI | GRCGYC | 4 cut(s) | 120, 429, 2495, 2515 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1595 |
| BstC8I | GCNNGC | 4 cut(s) | 542, 852, 2127, 3014 |
| BstDSI | CCRYGG | 2 cut(s) | 25, 3216 |
| BstF5I | GGATG | 8 cut(s) | 707, 1030, 1823, 2209, 2385, 2656, 2926, 3007 |
| BstFNI | CGCG | 2 cut(s) | 591, 3218 |
| BstHHI | GCGC | 7 cut(s) | 490, 591, 765, 850, 870, 1964, 3012 |
| BstMAI | GTCTC | 1 cut(s) | 576 |
| BstMCI | CGRYCG | 1 cut(s) | 100 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 86, 136, 181, 518, 776, 785, 1595, 1790, 3118 |
| BstNI | CCWGG | 3 cut(s) | 642, 1238, 1815 |
| BstNSI | RCATGY | 2 cut(s) | 544, 854 |
| BstSCI | CCNGG | 3 cut(s) | 640, 1236, 1813 |
| BstSFI | CTRYAG | 6 cut(s) | 416, 633, 735, 1083, 2762, 2802 |
| BstUI | CGCG | 2 cut(s) | 591, 3218 |
| BstV2I | GAAGAC | 4 cut(s) | 213, 1696, 2172, 2356 |
| BstX2I | RGATCY | 2 cut(s) | 2180, 2755 |
| BstYI | RGATCY | 2 cut(s) | 2180, 2755 |
| Bsu15I | ATCGAT | 1 cut(s) | 2136 |
| BsuRI | GGCC | 2 cut(s) | 640, 1990 |
| BsuTUI | ATCGAT | 1 cut(s) | 2136 |
| BtgI | CCRYGG | 2 cut(s) | 25, 3216 |
| BtgZI | GCGATG | 1 cut(s) | 751 |
| BtsCI | GGATG | 8 cut(s) | 707, 1030, 1823, 2209, 2385, 2656, 2926, 3007 |
| BtsIMutI | CAGTG | 5 cut(s) | 505, 988, 1533, 2091, 2838 |
| BveI | ACCTGC | 3 cut(s) | 481, 1678, 3094 |
| Cac8I | GCNNGC | 4 cut(s) | 542, 852, 2127, 3014 |
| CaiI | CAGNNNCTG | 2 cut(s) | 641, 1946 |
| CciI | TCATGA | 1 cut(s) | 2686 |
| CfoI | GCGC | 7 cut(s) | 490, 591, 765, 850, 870, 1964, 3012 |
| Cfr10I | RCCGGY | 1 cut(s) | 582 |
| Cfr13I | GGNCC | 2 cut(s) | 46, 638 |
| Cfr42I | CCGCGG | 1 cut(s) | 3219 |
| ClaI | ATCGAT | 1 cut(s) | 2136 |
| CseI | GACGC | 4 cut(s) | 128, 437, 2016, 2523 |
| Csp6I | GTAC | 4 cut(s) | 553, 2099, 2194, 3262 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 648, 683 |
| CviQI | GTAC | 4 cut(s) | 553, 2099, 2194, 3262 |
| DraI | TTTAAA | 1 cut(s) | 567 |
| DraIII | CACNNNGTG | 2 cut(s) | 469, 1595 |
| Eam1104I | CTCTTC | 4 cut(s) | 904, 981, 1502, 1979 |
| EarI | CTCTTC | 4 cut(s) | 904, 981, 1502, 1979 |
| EciI | GGCGGA | 1 cut(s) | 45 |
| Ecl136II | GAGCTC | 1 cut(s) | 279 |
| Eco130I | CCWWGG | 1 cut(s) | 84 |
| Eco147I | AGGCCT | 1 cut(s) | 1990 |
| Eco24I | GRGCYC | 2 cut(s) | 281, 415 |
| Eco47I | GGWCC | 1 cut(s) | 46 |
| Eco53kI | GAGCTC | 1 cut(s) | 279 |
| Eco57I | CTGAAG | 5 cut(s) | 543, 1239, 2174, 2769, 3038 |
| EcoICRI | GAGCTC | 1 cut(s) | 279 |
| EcoO109I | RGGNCCY | 1 cut(s) | 638 |
| EcoRI | GAATTC | 1 cut(s) | 2465 |
| EcoRII | CCWGG | 3 cut(s) | 640, 1236, 1813 |
| EcoT14I | CCWWGG | 1 cut(s) | 84 |
| EcoT22I | ATGCAT | 2 cut(s) | 3007, 3046 |
| EcoT38I | GRGCYC | 2 cut(s) | 281, 415 |
| ErhI | CCWWGG | 1 cut(s) | 84 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2268, 2300, 3011, 3043 |
| FaqI | GGGAC | 2 cut(s) | 2426, 2506 |
| FauI | CCCGC | 4 cut(s) | 119, 2141, 2316, 3105 |
| FauNDI | CATATG | 1 cut(s) | 3105 |
| FbaI | TGATCA | 3 cut(s) | 495, 1351, 3091 |
| FblI | GTMKAC | 4 cut(s) | 955, 1435, 1457, 2974 |
| FokI | GGATG | 8 cut(s) | 694, 1037, 1830, 2216, 2372, 2663, 2913, 3014 |
| FriOI | GRGCYC | 2 cut(s) | 281, 415 |
| FspBI | CTAG | 3 cut(s) | 719, 2027, 2781 |
| GlaI | GCGC | 7 cut(s) | 489, 590, 764, 849, 869, 1963, 3011 |
| GsaI | CCCAGC | 1 cut(s) | 783 |
| GsuI | CTGGAG | 1 cut(s) | 2138 |
| HaeIII | GGCC | 2 cut(s) | 640, 1990 |
| HapII | CCGG | 6 cut(s) | 58, 100, 350, 545, 583, 1681 |
| HgaI | GACGC | 4 cut(s) | 128, 437, 2016, 2523 |
| HhaI | GCGC | 7 cut(s) | 490, 591, 765, 850, 870, 1964, 3012 |
| Hin1I | GRCGYC | 4 cut(s) | 120, 429, 2495, 2515 |
| Hin6I | GCGC | 7 cut(s) | 488, 589, 763, 848, 868, 1962, 3010 |
| HinP1I | GCGC | 7 cut(s) | 488, 589, 763, 848, 868, 1962, 3010 |
| HincII | GTYRAC | 4 cut(s) | 1531, 1609, 2437, 2811 |
| HindII | GTYRAC | 4 cut(s) | 1531, 1609, 2437, 2811 |
| HindIII | AAGCTT | 2 cut(s) | 1065, 2796 |
| HpaII | CCGG | 6 cut(s) | 58, 100, 350, 545, 583, 1681 |
| HphI | GGTGA | 5 cut(s) | 505, 1324, 1961, 2032, 2732 |
| Hpy99I | CGWCG | 2 cut(s) | 122, 392 |
| HpyAV | CCTTC | 7 cut(s) | 155, 1411, 1765, 2123, 2261, 2613, 2744 |
| HpyCH4III | ACNGT | 6 cut(s) | 17, 983, 1094, 1544, 2610, 2676 |
| HpyCH4IV | ACGT | 3 cut(s) | 2495, 2971, 3097 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 86, 136, 181, 518, 776, 785, 1595, 1790, 3118 |
| HpySE526I | ACGT | 3 cut(s) | 2495, 2971, 3097 |
| Hsp92I | GRCGYC | 4 cut(s) | 120, 429, 2495, 2515 |
| HspAI | GCGC | 7 cut(s) | 488, 589, 763, 848, 868, 1962, 3010 |
| KpnI | GGTACC | 1 cut(s) | 2102 |
| Ksp22I | TGATCA | 3 cut(s) | 495, 1351, 3091 |
| KspI | CCGCGG | 1 cut(s) | 3219 |
| LguI | GCTCTTC | 1 cut(s) | 904 |
| LmnI | GCTCC | 7 cut(s) | 509, 1196, 1376, 2119, 2348, 3124, 3226 |
| LweI | GCATC | 9 cut(s) | 716, 774, 1015, 1325, 1490, 2583, 2992, 3031, 3099 |
| MaeI | CTAG | 3 cut(s) | 719, 2027, 2781 |
| MaeII | ACGT | 3 cut(s) | 2495, 2971, 3097 |
| MaeIII | GTNAC | 8 cut(s) | 37, 292, 1051, 1624, 2020, 2077, 2371, 3267 |
| MbiI | CCGCTC | 1 cut(s) | 2323 |
| MfeI | CAATTG | 1 cut(s) | 2584 |
| MflI | RGATCY | 2 cut(s) | 2180, 2755 |
| MhlI | GDGCHC | 5 cut(s) | 281, 415, 1655, 2545, 3103 |
| MlyI | GAGTC | 5 cut(s) | 998, 1072, 1431, 1851, 2530 |
| MmeI | TCCRAC | 2 cut(s) | 735, 1321 |
| Mph1103I | ATGCAT | 2 cut(s) | 3007, 3046 |
| MroXI | GAANNNNTTC | 4 cut(s) | 2337, 2555, 2771, 2855 |
| MslI | CAYNNNNRTG | 1 cut(s) | 3000 |
| MspA1I | CMGCKG | 5 cut(s) | 743, 791, 1943, 2072, 3218 |
| MspI | CCGG | 6 cut(s) | 58, 100, 350, 545, 583, 1681 |
| MspR9I | CCNGG | 3 cut(s) | 642, 1238, 1815 |
| MunI | CAATTG | 1 cut(s) | 2584 |
| Mva1269I | GAATGC | 1 cut(s) | 1577 |
| MvaI | CCWGG | 3 cut(s) | 642, 1238, 1815 |
| MvnI | CGCG | 2 cut(s) | 591, 3218 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 86, 136, 181, 518, 776, 785, 1595, 1790, 3118 |
| NdeI | CATATG | 1 cut(s) | 3105 |
| NlaIV | GGNNCC | 2 cut(s) | 2100, 3222 |
| NmeAIII | GCCGAG | 3 cut(s) | 227, 344, 1865 |
| NmuCI | GTSAC | 4 cut(s) | 1624, 2020, 2077, 3267 |
| NsiI | ATGCAT | 2 cut(s) | 3007, 3046 |
| NspI | RCATGY | 2 cut(s) | 544, 854 |
| PaeI | GCATGC | 2 cut(s) | 544, 854 |
| PagI | TCATGA | 1 cut(s) | 2686 |
| PaqCI | CACCTGC | 1 cut(s) | 481 |
| PceI | AGGCCT | 1 cut(s) | 1990 |
| PciSI | GCTCTTC | 1 cut(s) | 904 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 393, 435 |
| PctI | GAATGC | 1 cut(s) | 1577 |
| PdmI | GAANNNNTTC | 4 cut(s) | 2337, 2555, 2771, 2855 |
| PfeI | GAWTC | 9 cut(s) | 134, 308, 356, 1123, 1241, 1309, 2449, 2579, 2856 |
| PleI | GAGTC | 5 cut(s) | 997, 1072, 1431, 1850, 2530 |
| PpsI | GAGTC | 5 cut(s) | 997, 1072, 1431, 1850, 2530 |
| Psp124BI | GAGCTC | 1 cut(s) | 281 |
| Psp6I | CCWGG | 3 cut(s) | 640, 1236, 1813 |
| PspFI | CCCAGC | 1 cut(s) | 779 |
| PspGI | CCWGG | 3 cut(s) | 640, 1236, 1813 |
| PspN4I | GGNNCC | 2 cut(s) | 2100, 3222 |
| PspPI | GGNCC | 2 cut(s) | 46, 638 |
| PstI | CTGCAG | 4 cut(s) | 420, 637, 1087, 2766 |
| PstNI | CAGNNNCTG | 2 cut(s) | 641, 1946 |
| PsuI | RGATCY | 2 cut(s) | 2180, 2755 |
| PvuII | CAGCTG | 4 cut(s) | 743, 791, 1943, 2072 |
| RsaI | GTAC | 4 cut(s) | 554, 2100, 2195, 3263 |
| RsaNI | GTAC | 4 cut(s) | 553, 2099, 2194, 3262 |
| RseI | CAYNNNNRTG | 1 cut(s) | 3000 |
| SacI | GAGCTC | 1 cut(s) | 281 |
| SacII | CCGCGG | 1 cut(s) | 3219 |
| SapI | GCTCTTC | 1 cut(s) | 904 |
| Sau96I | GGNCC | 2 cut(s) | 46, 638 |
| ScaI | AGTACT | 1 cut(s) | 554 |
| SchI | GAGTC | 5 cut(s) | 998, 1072, 1431, 1851, 2530 |
| ScrFI | CCNGG | 3 cut(s) | 642, 1238, 1815 |
| SduI | GDGCHC | 5 cut(s) | 281, 415, 1655, 2545, 3103 |
| SfaNI | GCATC | 9 cut(s) | 716, 774, 1015, 1325, 1490, 2583, 2992, 3031, 3099 |
| SfcI | CTRYAG | 6 cut(s) | 416, 633, 735, 1083, 2762, 2802 |
| Sfr303I | CCGCGG | 1 cut(s) | 3219 |
| SgrBI | CCGCGG | 1 cut(s) | 3219 |
| SinI | GGWCC | 1 cut(s) | 46 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 3000 |
| SmlI | CTYRAG | 3 cut(s) | 280, 863, 2001 |
| SmoI | CTYRAG | 3 cut(s) | 280, 863, 2001 |
| SphI | GCATGC | 2 cut(s) | 544, 854 |
| SseBI | AGGCCT | 1 cut(s) | 1990 |
| SspMI | CTAG | 3 cut(s) | 719, 2027, 2781 |
| SstI | GAGCTC | 1 cut(s) | 281 |
| StuI | AGGCCT | 1 cut(s) | 1990 |
| StyD4I | CCNGG | 3 cut(s) | 640, 1236, 1813 |
| StyI | CCWWGG | 1 cut(s) | 84 |
| TaaI | ACNGT | 6 cut(s) | 17, 983, 1094, 1544, 2610, 2676 |
| TaiI | ACGT | 3 cut(s) | 2498, 2974, 3100 |
| TaqII | GACCGA | 2 cut(s) | 973, 1443 |
| TatI | WGTACW | 2 cut(s) | 552, 3261 |
| TauI | GCSGC | 9 cut(s) | 83, 243, 371, 485, 488, 599, 1031, 2243, 3221 |
| TfiI | GAWTC | 9 cut(s) | 134, 308, 356, 1123, 1241, 1309, 2449, 2579, 2856 |
| TscAI | CASTG | 5 cut(s) | 505, 988, 1540, 2091, 2845 |
| TseFI | GTSAC | 4 cut(s) | 1624, 2020, 2077, 3267 |
| Tsp45I | GTSAC | 4 cut(s) | 1624, 2020, 2077, 3267 |
| TspGWI | ACGGA | 7 cut(s) | 56, 180, 207, 220, 1183, 1394, 2591 |
| TspRI | CASTG | 5 cut(s) | 505, 988, 1540, 2091, 2845 |
| VpaK11BI | GGWCC | 1 cut(s) | 46 |
| XceI | RCATGY | 2 cut(s) | 544, 854 |
| XmiI | GTMKAC | 4 cut(s) | 955, 1435, 1457, 2974 |
| XmnI | GAANNNNTTC | 4 cut(s) | 2337, 2555, 2771, 2855 |
| XspI | CTAG | 3 cut(s) | 719, 2027, 2781 |
| ZraI | GACGTC | 1 cut(s) | 2496 |
| ZrmI | AGTACT | 1 cut(s) | 554 |
| Zsp2I | ATGCAT | 2 cut(s) | 3007, 3046 |