Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0003601

Physical Location & Seq

Genomic Coordinates Reverse (-)

31433635 .. 31440028

Gene Structure 6394 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1244300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2316 bp

ATGGCAGTGCTTCGTGAAATTGACGCTTTAATCGAGCAGAAACCGAGTGTGGACATTCAGCGTGATGATATTGGGAGTTGTGGTAGTGACGTTAGTGCCGCATCAGCGCCACCTTTGAGTAGTGAAAACCAAAAAGATTCTGTTAACCATGGATTGCCTAACATGCCGGATGAGTATTTGAAGTATTTGCTTTCTCTCAACGAAAGGCAGCGCGAGGCAGCTTGCAGCGATATTTCAGTACCTTTGATGATTGTTGCCGGCCCTGGAAGTGGAAAGACTTCAACGATAGTTGGGCGCGTTCTAATGCTGCTCAATGAGGGCATTAGCACGTCGAACATTCTAGCAATGACTTTCACTACAGCAGCAGCTTCCGAGATGAGAGATCGAATTGGATCTGTGACTGGGAAAGCAACGGCAAAACTACTAACAATCAGTACATTTCATTCATTTTCATTGCAACTTTGCCGATCACATGCTGAGAAACTCGAGCGCAGACCAGAATTTTTGATATATGGACATGGGCAACAGAGAAGAGCAATCATTGAAGCTGTGCGGTTATCAGAAGATGAAAAGAGTAAAACGAATCTTAATGTTGCTATAGATGGGGAAGAGTCTAACGGCGTAACATCTCCACATCATTTTAAGGATGCATCAAGGAAATGGCTGCAAAGGCTTCTGGAAAGACTCCGGCTGAATGCCGAAGAATGGGGTGAAATTCTTAGGAATTACAATGATATCTTGAAATCGTGCAATGCTTTGGACTACCACGACTTAATTAGCTGCTCTGTGAAGCTGCTAAGTGATTTTCCTGAAGTGTTGAAGGAGTGCCAGGAGTCATGGAAAGCTACTGTAATAGACGAGTTTCAAGACACAAGTGCTATGCAATATAGTCTTTTGCGGATTCTCGCCTCTCATAACCACATAACCATTCCCTTATCTGTTTTAAATCAAATAACATATATCCTGCTGCAGTCCATTTTCAGTTTCAATGGGGCGGACATTTCTGGATTTGATTCTTTTCGTAAAGATTTTTCAAATTACAAAGAGATTAGGCTTAATAAAAACTTTCGGTCCACACGCTATATTGTGGAAGCTGCAACTTCTGTTATAAAAAACAATAAGAAGCAATGCCAACTAAAGAATGTTGACATGGACAATTCTTCTGGGTCTAAGGTAATTATCAAGGAAAGTCACAATGAGGATGCACAATGCGCCTTTGTTGTCGACAAGATCCTGGAGACTGCATCTAAACGGTCAGAAGCAGGGTGCTCCTATGGAAATATAGCAATCCTTTACCGGAGGCAGGTATCAGGAAAAGTCTTCCAGACAGCCTTGCGTGAAAGGAAAATACCATTTAATGTTCATGGAGTGGCAGTTTATAGGAAGAAAGTAGTAGTTAGAGCCATTGTTGCTATGATTAAAACAACTTTGCCTGGTTGTGATGATGGATCATATAGGCAAGTCTTCAAGGCTCTACTTGCTTTTGAGAAAGAGGAAAAGAAGAAGGTGATCGATTATATTGACAAAATTTCAACTCACAGAAAATGCAGCTTCATATCAGCTGCTTGTGACATCTTTAGTGCAAAAATTTCTGGTACCTTGAAGAGGACTCAGCTTACCCAAGGACGCAAGGTGCTGTTAACACTAGAGATGATTTCAAAACTTGTTCTCAGGGAACAATCGATTTCAGCTGTCATAACCTCAGTTGCGAATATGGTACCACAGGTTCTTCAGTACCTACTAGACGACGTATCTGATTTCTTATCAACTCATTTTGTTGCGGGAAAAGGGGAGAGAGAAGTCGTAGCAGAAGAAAAAGGCTGCGTTAATTTACTCAAAGCTTTCATCGACTACATATCTGAGCAGGAGAGTGAAAATTTTCACTCCCGAAGACATGACAACCAAAGTTCTGTCACTTTGACTACTATTCATCAGTCAAAAGGTTTAGAGTGGGATATAGTTTTCATAATTAAGGTAAATGAATCTGAGATCCCGTTGTTGCATGAATTCAATGGGGTTGCAAAAGAAAATGGGACCTCCATTGAGGAGGAGAGACGCCTATTATATGTTGCAATGACTCGTGCTCGAAAAAAGCTTTTCATTCTTTATGTTACGATGGATTCCAGTTGGCAGATGCTTCAACCTTCGCGATTTCTGAAAGAAATTCCAAATCATCTACGAGAAGTCCAGGTGTGTATTACTGTTCATTATCCTCAGTTGTTCTGCTGTTTAGTCAAAAATACAAATAATGAAGAATCTGAAGTGTTTCTAATCTTATTAAGTCTAGTGTGGATGAATGCAATTTTTGTTTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003678 GO:0003824 GO:0004386 GO:0006139 GO:0006259 GO:0006310 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0032392 GO:0032508 GO:0034641 GO:0036292 GO:0043138 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0046483 GO:0051276 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0140097 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UvrD-helicase UvrD_C

Protein Analysis

772

Amino Acids

87.02

Weight (kDa)

8.02

Isoelectric Point (pI)

40.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UvrD-helicase	PF00580	66 - 344	8.3e-59	UvrD/REP helicase N-terminal domain
AAA_19	PF13245	71 - 309	5.7e-15	AAA domain
UvrD_C	PF13361	350 - 704	9e-42	UvrD-like helicase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003601)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25120
fragaria_vesca	FvH4_7g26710 FvH4_7g26710 FvH4_7g26710 FvH4_7g26710
malus_domestica	MD07G1241600.v1.1 MD07G1241700.v1.1 MD07G1243100.v1.1 MD07G1243600.v1.1 MD07G1244100.v1.1 MD07G1244200.v1.1 MD07G1244300.v1.1 MD07G1244800.v1.1 MD07G1245200.v1.1 MD07G1245700.v1.1 MD07G1245800.v1.1
prunus_persica	Prupe.2G270600_v2.0.a1 Prupe.2G270600_v2.0.a1
pyrus_communis	pycom07g21810 pycom07g21980
rosa_chinensis	RchiOBHm_Chr1g0373301
rosa_laevigata	RLG00000001620 RLG00000006922 RLG00000035899
rosa_multiflora	Rmu_ssc0000435.1_g000004
rosa_roxburghii	Rroxscaffold_4G00284280
rosa_rugosa	Rorug01G0376900
rosa_samantha	Rh1AG385900 Rh1BG350100 Rh1CG363200 Rh1DG380900 Rh3CG316100 Rh5CG053300 Rh5DG386500
rosa_wichuraiana	Rw1G034900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1109
Acc36I	ACCTGC	1 cut(s)	1294
Acc65I	GGTACC	2 cut(s)	1595, 1717
AccB1I	GGYRCC	2 cut(s)	1595, 1717
AccI	GTMKAC	1 cut(s)	1224
AccII	CGCG	3 cut(s)	213, 297, 2149
AciI	CCGC	5 cut(s)	99, 553, 898, 995, 1781
AclWI	GGATC	4 cut(s)	400, 1225, 1456, 1984
AcsI	RAATTY	7 cut(s)	500, 714, 1527, 1587, 1876, 2006, 2163
AcuI	CTGAAG	3 cut(s)	831, 1715, 2280
AcyI	GRCGYC	1 cut(s)	2056
AfaI	GTAC	5 cut(s)	240, 436, 1597, 1719, 1736
AfiI	CCNNNNNNNGG	4 cut(s)	269, 705, 1303, 1605
AjiI	CACGTC	1 cut(s)	330
AjnI	CCWGG	5 cut(s)	262, 828, 1233, 1432, 2187
Alw21I	GWGCWC	2 cut(s)	1271, 2086
Alw26I	GTCTC	2 cut(s)	1232, 2047
AlwI	GGATC	4 cut(s)	400, 1225, 1456, 1984
Ama87I	CYCGRG	1 cut(s)	485
AoxI	GGCC	1 cut(s)	259
ApoI	RAATTY	7 cut(s)	500, 714, 1527, 1587, 1876, 2006, 2163
Asp700I	GAANNNNTTC	3 cut(s)	277, 1878, 2265
Asp718I	GGTACC	2 cut(s)	1595, 1717
AspLEI	GCGC	5 cut(s)	109, 213, 297, 492, 1214
AspS9I	GGNCC	3 cut(s)	260, 1071, 2034
AsuHPI	GGTGA	2 cut(s)	722, 1519
AvaI	CYCGRG	1 cut(s)	485
AvaII	GGWCC	2 cut(s)	1071, 2034
BanI	GGYRCC	2 cut(s)	1595, 1717
BauI	CACGAG	1 cut(s)	2079
BbsI	GAAGAC	3 cut(s)	1312, 1456, 1897
Bbv12I	GWGCWC	2 cut(s)	1271, 2086
BccI	CCATC	3 cut(s)	596, 1439, 2110
BceAI	ACGGC	2 cut(s)	429, 634
BciT130I	CCWGG	5 cut(s)	264, 830, 1235, 1434, 2189
BcoDI	GTCTC	2 cut(s)	1232, 2047
BfaI	CTAG	4 cut(s)	341, 1646, 1742, 2285
BfmI	CTRYAG	3 cut(s)	357, 597, 968
BfoI	RGCGCY	1 cut(s)	110
BfuAI	ACCTGC	1 cut(s)	1294
Bme1390I	CCNGG	5 cut(s)	264, 830, 1235, 1434, 2189
Bme18I	GGWCC	2 cut(s)	1071, 2034
BmeT110I	CYCGRG	1 cut(s)	485
BmgBI	CACGTC	1 cut(s)	330
BmgT120I	GGNCC	3 cut(s)	260, 1071, 2034
BmiI	GGNNCC	3 cut(s)	1597, 1719, 2035
BmrFI	CCNGG	5 cut(s)	264, 830, 1235, 1434, 2189
BmrI	ACTGGG	1 cut(s)	411
BmsI	GCATC	6 cut(s)	110, 637, 659, 1192, 1253, 2124
BmuI	ACTGGG	1 cut(s)	411
BpiI	GAAGAC	3 cut(s)	1312, 1456, 1897
BpmI	CTGGAG	1 cut(s)	1256
Bsa29I	ATCGAT	2 cut(s)	1512, 1682
BsaHI	GRCGYC	1 cut(s)	2056
BsaJI	CCNNGG	3 cut(s)	148, 262, 1621
BsaWI	WCCGGW	1 cut(s)	1296
BsaXI	ACNNNNNCTCC	4 cut(s)	67, 97, 1359, 1389
Bsc4I	CCNNNNNNNGG	4 cut(s)	269, 705, 1303, 1605
Bse118I	RCCGGY	1 cut(s)	257
Bse1I	ACTGG	2 cut(s)	406, 2124
Bse3DI	GCAATG	5 cut(s)	351, 452, 757, 1133, 2079
BseBI	CCWGG	5 cut(s)	264, 830, 1235, 1434, 2189
BseCI	ATCGAT	2 cut(s)	1512, 1682
BseDI	CCNNGG	3 cut(s)	148, 262, 1621
BseGI	GGATG	4 cut(s)	175, 652, 1207, 2298
BseLI	CCNNNNNNNGG	4 cut(s)	269, 705, 1303, 1605
BseMI	GCAATG	5 cut(s)	351, 452, 757, 1133, 2079
BseMII	CTCAG	7 cut(s)	468, 1625, 1684, 1716, 1851, 1977, 2228
BseNI	ACTGG	2 cut(s)	406, 2124
BseRI	GAGGAG	2 cut(s)	2060, 2063
Bsh1236I	CGCG	3 cut(s)	213, 297, 2149
BshFI	GGCC	1 cut(s)	261
BshNI	GGYRCC	2 cut(s)	1595, 1717
BshVI	ATCGAT	2 cut(s)	1512, 1682
BsiHKAI	GWGCWC	2 cut(s)	1271, 2086
BsiHKCI	CYCGRG	1 cut(s)	485
BsiSI	CCGG	4 cut(s)	167, 258, 688, 1297
BslFI	GGGAC	1 cut(s)	2047
BslI	CCNNNNNNNGG	4 cut(s)	269, 705, 1303, 1605
BsmAI	GTCTC	2 cut(s)	1232, 2047
BsmBI	CGTCTC	1 cut(s)	2047
BsmFI	GGGAC	1 cut(s)	2047
BsmI	GAATGC	2 cut(s)	700, 2302
BsnI	GGCC	1 cut(s)	261
BsoBI	CYCGRG	1 cut(s)	485
Bsp1286I	GDGCHC	2 cut(s)	1271, 2086
Bsp143I	GATC	7 cut(s)	382, 392, 467, 1230, 1448, 1509, 1989
Bsp19I	CCATGG	1 cut(s)	148
Bsp68I	TCGCGA	1 cut(s)	2149
BspACI	CCGC	5 cut(s)	99, 553, 898, 995, 1781
BspANI	GGCC	1 cut(s)	261
BspCNI	CTCAG	7 cut(s)	469, 1624, 1683, 1715, 1852, 1978, 2227
BspDI	ATCGAT	2 cut(s)	1512, 1682
BspFNI	CGCG	3 cut(s)	213, 297, 2149
BspLI	GGNNCC	3 cut(s)	1597, 1719, 2035
BspMAI	CTGCAG	1 cut(s)	972
BspMI	ACCTGC	1 cut(s)	1294
BspPI	GGATC	4 cut(s)	400, 1225, 1456, 1984
BspQI	GCTCTTC	1 cut(s)	526
BspT107I	GGYRCC	2 cut(s)	1595, 1717
BsrDI	GCAATG	5 cut(s)	351, 452, 757, 1133, 2079
BsrFI	RCCGGY	1 cut(s)	257
BsrI	ACTGG	2 cut(s)	406, 2124
BssAI	RCCGGY	1 cut(s)	257
BssECI	CCNNGG	3 cut(s)	148, 262, 1621
BssMI	GATC	7 cut(s)	382, 392, 467, 1230, 1448, 1509, 1989
BssNI	GRCGYC	1 cut(s)	2056
BssSI	CACGAG	1 cut(s)	2079
BssT1I	CCWWGG	2 cut(s)	148, 1621
Bst2BI	CACGAG	1 cut(s)	2079
Bst2UI	CCWGG	5 cut(s)	264, 830, 1235, 1434, 2189
Bst4CI	ACNGT	3 cut(s)	850, 1254, 2203
Bst6I	CTCTTC	3 cut(s)	526, 603, 1598
BstACI	GRCGYC	1 cut(s)	2056
BstC8I	GCNNGC	2 cut(s)	223, 259
BstDSI	CCRYGG	1 cut(s)	148
BstENI	CCTNNNNNAGG	1 cut(s)	1603
BstF5I	GGATG	4 cut(s)	175, 652, 1207, 2298
BstFNI	CGCG	3 cut(s)	213, 297, 2149
BstH2I	RGCGCY	1 cut(s)	110
BstHHI	GCGC	5 cut(s)	109, 213, 297, 492, 1214
BstKTI	GATC	7 cut(s)	385, 395, 470, 1233, 1451, 1512, 1992
BstMAI	GTCTC	2 cut(s)	1232, 2047
BstMBI	GATC	7 cut(s)	382, 392, 467, 1230, 1448, 1509, 1989
BstMWI	GCNNNNNNNGC	6 cut(s)	104, 163, 670, 1211, 1409, 1478
BstNI	CCWGG	5 cut(s)	264, 830, 1235, 1434, 2189
BstNSI	RCATGY	2 cut(s)	166, 476
BstSCI	CCNGG	5 cut(s)	262, 828, 1233, 1432, 2187
BstSFI	CTRYAG	3 cut(s)	357, 597, 968
BstUI	CGCG	3 cut(s)	213, 297, 2149
BstV2I	GAAGAC	3 cut(s)	1312, 1456, 1897
BstX2I	RGATCY	3 cut(s)	392, 1230, 1989
BstYI	RGATCY	3 cut(s)	392, 1230, 1989
Bsu15I	ATCGAT	2 cut(s)	1512, 1682
BsuRI	GGCC	1 cut(s)	261
BsuTUI	ATCGAT	2 cut(s)	1512, 1682
BtgI	CCRYGG	1 cut(s)	148
BtrI	CACGTC	1 cut(s)	330
BtsCI	GGATG	4 cut(s)	175, 652, 1207, 2298
BtsI	GCAGTG	1 cut(s)	12
BtsIMutI	CAGTG	1 cut(s)	12
BtuMI	TCGCGA	1 cut(s)	2149
BveI	ACCTGC	1 cut(s)	1294
Cac8I	GCNNGC	2 cut(s)	223, 259
CfoI	GCGC	5 cut(s)	109, 213, 297, 492, 1214
Cfr10I	RCCGGY	1 cut(s)	257
Cfr13I	GGNCC	3 cut(s)	260, 1071, 2034
ClaI	ATCGAT	2 cut(s)	1512, 1682
CseI	GACGC	3 cut(s)	32, 1635, 2064
Csp6I	GTAC	5 cut(s)	239, 435, 1596, 1718, 1735
CviAII	CATG	9 cut(s)	149, 163, 473, 518, 837, 1150, 1364, 1895, 2003
CviQI	GTAC	5 cut(s)	239, 435, 1596, 1718, 1735
DpnI	GATC	7 cut(s)	384, 394, 469, 1232, 1450, 1511, 1991
DpnII	GATC	7 cut(s)	382, 392, 467, 1230, 1448, 1509, 1989
DraI	TTTAAA	1 cut(s)	945
Eam1104I	CTCTTC	3 cut(s)	526, 603, 1598
EarI	CTCTTC	3 cut(s)	526, 603, 1598
EciI	GGCGGA	1 cut(s)	1010
Eco130I	CCWWGG	2 cut(s)	148, 1621
Eco32I	GATATC	1 cut(s)	736
Eco47I	GGWCC	2 cut(s)	1071, 2034
Eco57I	CTGAAG	3 cut(s)	831, 1715, 2280
Eco88I	CYCGRG	1 cut(s)	485
EcoNI	CCTNNNNNAGG	1 cut(s)	1603
EcoO109I	RGGNCCY	1 cut(s)	2034
EcoRI	GAATTC	1 cut(s)	2006
EcoRII	CCWGG	5 cut(s)	262, 828, 1233, 1432, 2187
EcoRV	GATATC	1 cut(s)	736
EcoT14I	CCWWGG	2 cut(s)	148, 1621
EcoT22I	ATGCAT	1 cut(s)	652
ErhI	CCWWGG	2 cut(s)	148, 1621
Esp3I	CGTCTC	1 cut(s)	2047
FaeI	CATG	9 cut(s)	152, 166, 476, 521, 840, 1153, 1367, 1898, 2006
FaqI	GGGAC	1 cut(s)	2047
FatI	CATG	9 cut(s)	148, 162, 472, 517, 836, 1149, 1363, 1894, 2002
FauI	CCCGC	1 cut(s)	1774
FblI	GTMKAC	1 cut(s)	1224
FokI	GGATG	4 cut(s)	182, 659, 1214, 2305
FspBI	CTAG	4 cut(s)	341, 1646, 1742, 2285
GlaI	GCGC	5 cut(s)	108, 212, 296, 491, 1213
GsuI	CTGGAG	1 cut(s)	1256
HaeII	RGCGCY	1 cut(s)	110
HaeIII	GGCC	1 cut(s)	261
HapII	CCGG	4 cut(s)	167, 258, 688, 1297
HgaI	GACGC	3 cut(s)	32, 1635, 2064
HhaI	GCGC	5 cut(s)	109, 213, 297, 492, 1214
Hin1I	GRCGYC	1 cut(s)	2056
Hin1II	CATG	9 cut(s)	152, 166, 476, 521, 840, 1153, 1367, 1898, 2006
Hin6I	GCGC	5 cut(s)	107, 211, 295, 490, 1212
HinP1I	GCGC	5 cut(s)	107, 211, 295, 490, 1212
HincII	GTYRAC	4 cut(s)	145, 1147, 1225, 1641
HindII	GTYRAC	4 cut(s)	145, 1147, 1225, 1641
HindIII	AAGCTT	2 cut(s)	1839, 2093
HpaI	GTTAAC	2 cut(s)	145, 1641
HpaII	CCGG	4 cut(s)	167, 258, 688, 1297
HphI	GGTGA	2 cut(s)	722, 1519
Hpy166II	GTNNAC	6 cut(s)	52, 145, 1074, 1147, 1225, 1641
Hpy188I	TCNGA	8 cut(s)	373, 562, 1258, 1756, 1861, 1987, 2157, 2260
Hpy8I	GTNNAC	6 cut(s)	52, 145, 1074, 1147, 1225, 1641
Hpy99I	CGWCG	2 cut(s)	334, 1751
HpyAV	CCTTC	3 cut(s)	814, 1498, 2154
HpyCH4III	ACNGT	3 cut(s)	850, 1254, 2203
HpyCH4IV	ACGT	3 cut(s)	90, 329, 1749
HpyF10VI	GCNNNNNNNGC	6 cut(s)	104, 163, 670, 1211, 1409, 1478
HpySE526I	ACGT	3 cut(s)	90, 329, 1749
Hsp92I	GRCGYC	1 cut(s)	2056
Hsp92II	CATG	9 cut(s)	152, 166, 476, 521, 840, 1153, 1367, 1898, 2006
HspAI	GCGC	5 cut(s)	107, 211, 295, 490, 1212
KpnI	GGTACC	2 cut(s)	1599, 1721
KroI	GCCGGC	1 cut(s)	257
KroNI	GCCGGC	1 cut(s)	259
KspAI	GTTAAC	2 cut(s)	145, 1641
Kzo9I	GATC	7 cut(s)	382, 392, 467, 1230, 1448, 1509, 1989
LguI	GCTCTTC	1 cut(s)	526
LmnI	GCTCC	1 cut(s)	1274
LweI	GCATC	6 cut(s)	110, 637, 659, 1192, 1253, 2124
MaeI	CTAG	4 cut(s)	341, 1646, 1742, 2285
MaeII	ACGT	3 cut(s)	90, 329, 1749
MaeIII	GTNAC	7 cut(s)	86, 397, 622, 1190, 1568, 1912, 2110
MalI	GATC	7 cut(s)	384, 394, 469, 1232, 1450, 1511, 1991
MboI	GATC	7 cut(s)	382, 392, 467, 1230, 1448, 1509, 1989
MflI	RGATCY	3 cut(s)	392, 1230, 1989
MhlI	GDGCHC	2 cut(s)	1271, 2086
MlyI	GAGTC	5 cut(s)	620, 678, 842, 1603, 2071
Mph1103I	ATGCAT	1 cut(s)	652
MroNI	GCCGGC	1 cut(s)	257
MroXI	GAANNNNTTC	3 cut(s)	277, 1878, 2265
MspA1I	CMGCKG	2 cut(s)	1562, 1691
MspI	CCGG	4 cut(s)	167, 258, 688, 1297
MspR9I	CCNGG	5 cut(s)	264, 830, 1235, 1434, 2189
Mva1269I	GAATGC	2 cut(s)	700, 2302
MvaI	CCWGG	5 cut(s)	264, 830, 1235, 1434, 2189
MvnI	CGCG	3 cut(s)	213, 297, 2149
MwoI	GCNNNNNNNGC	6 cut(s)	104, 163, 670, 1211, 1409, 1478
NaeI	GCCGGC	1 cut(s)	259
NcoI	CCATGG	1 cut(s)	148
NdeII	GATC	7 cut(s)	382, 392, 467, 1230, 1448, 1509, 1989
NgoMIV	GCCGGC	1 cut(s)	257
NlaIII	CATG	9 cut(s)	152, 166, 476, 521, 840, 1153, 1367, 1898, 2006
NlaIV	GGNNCC	3 cut(s)	1597, 1719, 2035
NmuCI	GTSAC	5 cut(s)	86, 397, 1190, 1568, 1912
NruI	TCGCGA	1 cut(s)	2149
NsiI	ATGCAT	1 cut(s)	652
NspI	RCATGY	2 cut(s)	166, 476
PaeR7I	CTCGAG	1 cut(s)	485
PciSI	GCTCTTC	1 cut(s)	526
PcsI	WCGNNNNNNNCGW	1 cut(s)	30
PctI	GAATGC	2 cut(s)	700, 2302
PdiI	GCCGGC	1 cut(s)	259
PdmI	GAANNNNTTC	3 cut(s)	277, 1878, 2265
PfeI	GAWTC	7 cut(s)	137, 583, 901, 1013, 1982, 2120, 2255
PfoI	TCCNGGA	1 cut(s)	1233
PleI	GAGTC	5 cut(s)	619, 678, 841, 1603, 2071
PpsI	GAGTC	5 cut(s)	619, 678, 841, 1603, 2071
PpuMI	RGGWCCY	1 cut(s)	2034
PsiI	TTATAA	1 cut(s)	1109
Psp5II	RGGWCCY	1 cut(s)	2034
Psp6I	CCWGG	5 cut(s)	262, 828, 1233, 1432, 2187
PspGI	CCWGG	5 cut(s)	262, 828, 1233, 1432, 2187
PspN4I	GGNNCC	3 cut(s)	1597, 1719, 2035
PspPI	GGNCC	3 cut(s)	260, 1071, 2034
PspPPI	RGGWCCY	1 cut(s)	2034
PspXI	VCTCGAGB	1 cut(s)	485
PsrI	GAACNNNNNNTAC	2 cut(s)	1710, 1742
PstI	CTGCAG	1 cut(s)	972
PsuI	RGATCY	3 cut(s)	392, 1230, 1989
PvuII	CAGCTG	2 cut(s)	1562, 1691
RruI	TCGCGA	1 cut(s)	2149
RsaI	GTAC	5 cut(s)	240, 436, 1597, 1719, 1736
RsaNI	GTAC	5 cut(s)	239, 435, 1596, 1718, 1735
SalI	GTCGAC	1 cut(s)	1223
SapI	GCTCTTC	1 cut(s)	526
Sau3AI	GATC	7 cut(s)	382, 392, 467, 1230, 1448, 1509, 1989
Sau96I	GGNCC	3 cut(s)	260, 1071, 2034
SchI	GAGTC	5 cut(s)	620, 678, 842, 1603, 2071
ScrFI	CCNGG	5 cut(s)	264, 830, 1235, 1434, 2189
SduI	GDGCHC	2 cut(s)	1271, 2086
SfaNI	GCATC	6 cut(s)	110, 637, 659, 1192, 1253, 2124
SfcI	CTRYAG	3 cut(s)	357, 597, 968
Sfr274I	CTCGAG	1 cut(s)	485
SinI	GGWCC	2 cut(s)	1071, 2034
SlaI	CTCGAG	1 cut(s)	485
SmlI	CTYRAG	1 cut(s)	485
SmoI	CTYRAG	1 cut(s)	485
SsiI	CCGC	5 cut(s)	99, 553, 898, 995, 1781
SspMI	CTAG	4 cut(s)	341, 1646, 1742, 2285
StyD4I	CCNGG	5 cut(s)	262, 828, 1233, 1432, 2187
StyI	CCWWGG	2 cut(s)	148, 1621
TaaI	ACNGT	3 cut(s)	850, 1254, 2203
TaiI	ACGT	3 cut(s)	93, 332, 1752
TaqI	TCGA	9 cut(s)	33, 332, 385, 486, 1224, 1512, 1682, 1848, 2086
TaqII	GACCGA	1 cut(s)	1059
TatI	WGTACW	1 cut(s)	434
TauI	GCSGC	1 cut(s)	101
TfiI	GAWTC	7 cut(s)	137, 583, 901, 1013, 1982, 2120, 2255
TscAI	CASTG	1 cut(s)	12
TseFI	GTSAC	5 cut(s)	86, 397, 1190, 1568, 1912
Tsp45I	GTSAC	5 cut(s)	86, 397, 1190, 1568, 1912
TspRI	CASTG	1 cut(s)	12
VpaK11BI	GGWCC	2 cut(s)	1071, 2034
XagI	CCTNNNNNAGG	1 cut(s)	1603
XapI	RAATTY	7 cut(s)	500, 714, 1527, 1587, 1876, 2006, 2163
XceI	RCATGY	2 cut(s)	166, 476
XhoI	CTCGAG	1 cut(s)	485
XmiI	GTMKAC	1 cut(s)	1224
XmnI	GAANNNNTTC	3 cut(s)	277, 1878, 2265
XspI	CTAG	4 cut(s)	341, 1646, 1742, 2285
Zsp2I	ATGCAT	1 cut(s)	652

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.