ATP-dependent DNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G25120 |
| fragaria_vesca | FvH4_7g26710 FvH4_7g26710 FvH4_7g26710 FvH4_7g26710 |
| malus_domestica | MD07G1241600.v1.1 MD07G1241700.v1.1 MD07G1243100.v1.1 MD07G1243600.v1.1 MD07G1244100.v1.1 MD07G1244200.v1.1 MD07G1244300.v1.1 MD07G1244800.v1.1 MD07G1245200.v1.1 MD07G1245700.v1.1 MD07G1245800.v1.1 |
| prunus_persica | Prupe.2G270600_v2.0.a1 Prupe.2G270600_v2.0.a1 |
| pyrus_communis | pycom07g21810 pycom07g21980 |
| rosa_chinensis | RchiOBHm_Chr1g0373301 |
| rosa_laevigata | RLG00000001620 RLG00000006922 RLG00000035899 |
| rosa_multiflora | Rmu_ssc0000435.1_g000004 |
| rosa_roxburghii | Rroxscaffold_4G00284280 |
| rosa_rugosa | Rorug01G0376900 |
| rosa_samantha | Rh1AG385900 Rh1BG350100 Rh1CG363200 Rh1DG380900 Rh3CG316100 Rh5CG053300 Rh5DG386500 |
| rosa_wichuraiana | Rw1G034900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 2516, 3248 |
| Acc16I | TGCGCA | 1 cut(s) | 141 |
| Acc36I | ACCTGC | 2 cut(s) | 1696, 3112 |
| Acc65I | GGTACC | 1 cut(s) | 2116 |
| AccB1I | GGYRCC | 1 cut(s) | 2116 |
| AccBSI | CCGCTC | 1 cut(s) | 2341 |
| AccI | GTMKAC | 1 cut(s) | 1475 |
| AccII | CGCG | 3 cut(s) | 508, 609, 3250 |
| AccIII | TCCGGA | 1 cut(s) | 1712 |
| AclWI | GGATC | 3 cut(s) | 1563, 1576, 1855 |
| AcuI | CTGAAG | 4 cut(s) | 1257, 2192, 2787, 3056 |
| AcyI | GRCGYC | 4 cut(s) | 123, 2513, 2533, 3245 |
| AdeI | CACNNNGTG | 1 cut(s) | 1613 |
| AfaI | GTAC | 4 cut(s) | 572, 2118, 2213, 3281 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 665, 1600, 1705 |
| AjnI | CCWGG | 3 cut(s) | 658, 1254, 1831 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1719, 1751 |
| Alw21I | GWGCWC | 5 cut(s) | 193, 293, 1673, 2563, 3121 |
| Alw26I | GTCTC | 2 cut(s) | 594, 1634 |
| AlwI | GGATC | 3 cut(s) | 1563, 1576, 1855 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 260, 592, 659, 1964 |
| Aor13HI | TCCGGA | 1 cut(s) | 1712 |
| AoxI | GGCC | 2 cut(s) | 974, 2006 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 395, 427, 2739, 2771 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2355 |
| Asp718I | GGTACC | 1 cut(s) | 2116 |
| AspLEI | GCGC | 6 cut(s) | 142, 508, 783, 888, 3030, 3252 |
| AspS9I | GGNCC | 2 cut(s) | 656, 2007 |
| AsuHPI | GGTGA | 8 cut(s) | 533, 542, 1918, 1979, 2474, 2616, 2786, 3065 |
| AvaII | GGWCC | 1 cut(s) | 656 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2459, 2492 |
| BamHI | GGATCC | 1 cut(s) | 1568 |
| BanI | GGYRCC | 1 cut(s) | 2116 |
| BanII | GRGCYC | 2 cut(s) | 193, 293 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2451, 2483 |
| BauI | CACGAG | 1 cut(s) | 2556 |
| BbsI | GAAGAC | 4 cut(s) | 1310, 1714, 2190, 2374 |
| Bbv12I | GWGCWC | 5 cut(s) | 193, 293, 1673, 2563, 3121 |
| BccI | CCATC | 6 cut(s) | 229, 1838, 2156, 2411, 2415, 3084 |
| BceAI | ACGGC | 2 cut(s) | 43, 110 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 842, 876 |
| BciT130I | CCWGG | 3 cut(s) | 660, 1256, 1833 |
| BciVI | GTATCC | 1 cut(s) | 1720 |
| BclI | TGATCA | 2 cut(s) | 1369, 3109 |
| BcoDI | GTCTC | 2 cut(s) | 594, 1634 |
| BfaI | CTAG | 2 cut(s) | 737, 2799 |
| BfmI | CTRYAG | 4 cut(s) | 651, 753, 1101, 2820 |
| BfuAI | ACCTGC | 2 cut(s) | 1696, 3112 |
| BfuI | GTATCC | 1 cut(s) | 1720 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 89 |
| BglII | AGATCT | 2 cut(s) | 1632, 2198 |
| BlpI | GCTNAGC | 1 cut(s) | 201 |
| BmcAI | AGTACT | 1 cut(s) | 572 |
| Bme1390I | CCNGG | 3 cut(s) | 660, 1256, 1833 |
| Bme18I | GGWCC | 1 cut(s) | 656 |
| BmgT120I | GGNCC | 2 cut(s) | 656, 2007 |
| BmiI | GGNNCC | 4 cut(s) | 1570, 2009, 2118, 3240 |
| BmrFI | CCNGG | 3 cut(s) | 660, 1256, 1833 |
| BmrI | ACTGGG | 1 cut(s) | 2736 |
| BmsI | GCATC | 9 cut(s) | 127, 734, 1033, 1508, 1594, 2601, 2710, 3049, 3117 |
| BmuI | ACTGGG | 1 cut(s) | 2736 |
| BpiI | GAAGAC | 4 cut(s) | 1310, 1714, 2190, 2374 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 24, 56 |
| BpmI | CTGGAG | 3 cut(s) | 345, 902, 2156 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 201 |
| BpuEI | CTTGAG | 3 cut(s) | 277, 1208, 2004 |
| Bsa29I | ATCGAT | 1 cut(s) | 1376 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1368, 1580 |
| BsaHI | GRCGYC | 4 cut(s) | 123, 2513, 2533, 3245 |
| BsaI | GGTCTC | 1 cut(s) | 1634 |
| BsaJI | CCNNGG | 5 cut(s) | 25, 87, 544, 1182, 3234 |
| BsaWI | WCCGGW | 3 cut(s) | 386, 1698, 1712 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 208, 238, 1761, 1791, 2345, 2375, 3223, 3253 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 665, 1600, 1705 |
| Bse118I | RCCGGY | 1 cut(s) | 600 |
| Bse1I | ACTGG | 5 cut(s) | 362, 885, 2223, 2731, 2863 |
| Bse3DI | GCAATG | 6 cut(s) | 627, 747, 783, 1129, 1183, 2556 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1368, 1580 |
| BseAI | TCCGGA | 1 cut(s) | 1712 |
| BseBI | CCWGG | 3 cut(s) | 660, 1256, 1833 |
| BseCI | ATCGAT | 1 cut(s) | 1376 |
| BseDI | CCNNGG | 5 cut(s) | 25, 87, 544, 1182, 3234 |
| BseJI | GATNNNNATC | 2 cut(s) | 1368, 1580 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 665, 1600, 1705 |
| BseMI | GCAATG | 6 cut(s) | 627, 747, 783, 1129, 1183, 2556 |
| BseMII | CTCAG | 9 cut(s) | 188, 192, 264, 312, 1088, 1128, 2115, 2328, 2647 |
| BseNI | ACTGG | 5 cut(s) | 362, 885, 2223, 2731, 2863 |
| BseRI | GAGGAG | 4 cut(s) | 62, 183, 1017, 2537 |
| BseYI | CCCAGC | 2 cut(s) | 797, 2010 |
| BsgI | GTGCAG | 2 cut(s) | 2801, 3171 |
| Bsh1236I | CGCG | 3 cut(s) | 508, 609, 3250 |
| Bsh1285I | CGRYCG | 2 cut(s) | 103, 387 |
| BshFI | GGCC | 2 cut(s) | 976, 2008 |
| BshNI | GGYRCC | 1 cut(s) | 2116 |
| BshVI | ATCGAT | 1 cut(s) | 1376 |
| BsiEI | CGRYCG | 2 cut(s) | 103, 387 |
| BsiHKAI | GWGCWC | 5 cut(s) | 193, 293, 1673, 2563, 3121 |
| BsiSI | CCGG | 5 cut(s) | 387, 563, 601, 1699, 1713 |
| BslFI | GGGAC | 2 cut(s) | 2444, 2524 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 665, 1600, 1705 |
| BsmAI | GTCTC | 2 cut(s) | 594, 1634 |
| BsmFI | GGGAC | 2 cut(s) | 2444, 2524 |
| BsmI | GAATGC | 1 cut(s) | 1595 |
| BsnI | GGCC | 2 cut(s) | 976, 2008 |
| Bso31I | GGTCTC | 1 cut(s) | 1634 |
| Bsp1286I | GDGCHC | 5 cut(s) | 193, 293, 1673, 2563, 3121 |
| Bsp13I | TCCGGA | 1 cut(s) | 1712 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 201 |
| Bsp19I | CCATGG | 1 cut(s) | 544 |
| BspANI | GGCC | 2 cut(s) | 976, 2008 |
| BspCNI | CTCAG | 9 cut(s) | 187, 193, 263, 311, 1087, 1129, 2114, 2329, 2646 |
| BspDI | ATCGAT | 1 cut(s) | 1376 |
| BspEI | TCCGGA | 1 cut(s) | 1712 |
| BspFNI | CGCG | 3 cut(s) | 508, 609, 3250 |
| BspHI | TCATGA | 1 cut(s) | 2704 |
| BspLI | GGNNCC | 4 cut(s) | 1570, 2009, 2118, 3240 |
| BspMAI | CTGCAG | 2 cut(s) | 655, 1105 |
| BspMI | ACCTGC | 2 cut(s) | 1696, 3112 |
| BspPI | GGATC | 3 cut(s) | 1563, 1576, 1855 |
| BspQI | GCTCTTC | 2 cut(s) | 99, 922 |
| BspT107I | GGYRCC | 1 cut(s) | 2116 |
| BspTNI | GGTCTC | 1 cut(s) | 1634 |
| BsrBI | CCGCTC | 1 cut(s) | 2341 |
| BsrDI | GCAATG | 6 cut(s) | 627, 747, 783, 1129, 1183, 2556 |
| BsrFI | RCCGGY | 1 cut(s) | 600 |
| BsrI | ACTGG | 5 cut(s) | 362, 885, 2223, 2731, 2863 |
| BssAI | RCCGGY | 1 cut(s) | 600 |
| BssECI | CCNNGG | 5 cut(s) | 25, 87, 544, 1182, 3234 |
| BssNI | GRCGYC | 4 cut(s) | 123, 2513, 2533, 3245 |
| BssSI | CACGAG | 1 cut(s) | 2556 |
| BssT1I | CCWWGG | 3 cut(s) | 87, 544, 1182 |
| Bst2BI | CACGAG | 1 cut(s) | 2556 |
| Bst2UI | CCWGG | 3 cut(s) | 660, 1256, 1833 |
| Bst6I | CTCTTC | 5 cut(s) | 99, 922, 999, 1520, 1997 |
| BstACI | GRCGYC | 4 cut(s) | 123, 2513, 2533, 3245 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1613 |
| BstC8I | GCNNGC | 5 cut(s) | 189, 560, 2145, 2934, 3032 |
| BstDSI | CCRYGG | 3 cut(s) | 25, 544, 3234 |
| BstFNI | CGCG | 3 cut(s) | 508, 609, 3250 |
| BstHHI | GCGC | 6 cut(s) | 142, 508, 783, 888, 3030, 3252 |
| BstMAI | GTCTC | 2 cut(s) | 594, 1634 |
| BstMCI | CGRYCG | 2 cut(s) | 103, 387 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 89, 139, 184, 197, 794, 803, 1613, 1808, 3136 |
| BstNI | CCWGG | 3 cut(s) | 660, 1256, 1833 |
| BstNSI | RCATGY | 2 cut(s) | 562, 872 |
| BstSCI | CCNGG | 3 cut(s) | 658, 1254, 1831 |
| BstSFI | CTRYAG | 4 cut(s) | 651, 753, 1101, 2820 |
| BstUI | CGCG | 3 cut(s) | 508, 609, 3250 |
| BstV2I | GAAGAC | 4 cut(s) | 1310, 1714, 2190, 2374 |
| BstX2I | RGATCY | 3 cut(s) | 1568, 1632, 2198 |
| BstYI | RGATCY | 3 cut(s) | 1568, 1632, 2198 |
| Bsu15I | ATCGAT | 1 cut(s) | 1376 |
| BsuI | GTATCC | 1 cut(s) | 1720 |
| BsuRI | GGCC | 2 cut(s) | 976, 2008 |
| BsuTUI | ATCGAT | 1 cut(s) | 1376 |
| BtgI | CCRYGG | 3 cut(s) | 25, 544, 3234 |
| BtgZI | GCGATG | 1 cut(s) | 1669 |
| BtsIMutI | CAGTG | 6 cut(s) | 479, 1006, 1984, 2109, 2194, 3287 |
| BveI | ACCTGC | 2 cut(s) | 1696, 3112 |
| Cac8I | GCNNGC | 5 cut(s) | 189, 560, 2145, 2934, 3032 |
| CaiI | CAGNNNCTG | 4 cut(s) | 260, 592, 659, 1964 |
| CciI | TCATGA | 1 cut(s) | 2704 |
| CfoI | GCGC | 6 cut(s) | 142, 508, 783, 888, 3030, 3252 |
| Cfr10I | RCCGGY | 1 cut(s) | 600 |
| Cfr13I | GGNCC | 2 cut(s) | 656, 2007 |
| ClaI | ATCGAT | 1 cut(s) | 1376 |
| CseI | GACGC | 5 cut(s) | 131, 449, 1035, 2034, 2541 |
| Csp6I | GTAC | 4 cut(s) | 571, 2117, 2212, 3280 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2233, 2268 |
| CviQI | GTAC | 4 cut(s) | 571, 2117, 2212, 3280 |
| DraIII | CACNNNGTG | 1 cut(s) | 1613 |
| Eam1104I | CTCTTC | 5 cut(s) | 99, 922, 999, 1520, 1997 |
| EarI | CTCTTC | 5 cut(s) | 99, 922, 999, 1520, 1997 |
| EciI | GGCGGA | 2 cut(s) | 45, 51 |
| Ecl136II | GAGCTC | 2 cut(s) | 191, 291 |
| Eco130I | CCWWGG | 3 cut(s) | 87, 544, 1182 |
| Eco24I | GRGCYC | 2 cut(s) | 193, 293 |
| Eco31I | GGTCTC | 1 cut(s) | 1634 |
| Eco32I | GATATC | 1 cut(s) | 1162 |
| Eco47I | GGWCC | 1 cut(s) | 656 |
| Eco53kI | GAGCTC | 2 cut(s) | 191, 291 |
| Eco57I | CTGAAG | 4 cut(s) | 1257, 2192, 2787, 3056 |
| EcoICRI | GAGCTC | 2 cut(s) | 191, 291 |
| EcoO109I | RGGNCCY | 2 cut(s) | 656, 2007 |
| EcoRI | GAATTC | 2 cut(s) | 390, 2483 |
| EcoRII | CCWGG | 3 cut(s) | 658, 1254, 1831 |
| EcoRV | GATATC | 1 cut(s) | 1162 |
| EcoT14I | CCWWGG | 3 cut(s) | 87, 544, 1182 |
| EcoT22I | ATGCAT | 1 cut(s) | 3064 |
| EcoT38I | GRGCYC | 2 cut(s) | 193, 293 |
| ErhI | CCWWGG | 3 cut(s) | 87, 544, 1182 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2286, 2318 |
| FaqI | GGGAC | 2 cut(s) | 2444, 2524 |
| FauI | CCCGC | 2 cut(s) | 2334, 3123 |
| FauNDI | CATATG | 1 cut(s) | 3123 |
| FbaI | TGATCA | 2 cut(s) | 1369, 3109 |
| FblI | GTMKAC | 1 cut(s) | 1475 |
| FriOI | GRGCYC | 2 cut(s) | 193, 293 |
| FspAI | RTGCGCAY | 1 cut(s) | 141 |
| FspBI | CTAG | 2 cut(s) | 737, 2799 |
| FspI | TGCGCA | 1 cut(s) | 141 |
| GlaI | GCGC | 6 cut(s) | 141, 507, 782, 887, 3029, 3251 |
| GsaI | CCCAGC | 2 cut(s) | 801, 2014 |
| GsuI | CTGGAG | 3 cut(s) | 345, 902, 2156 |
| HaeIII | GGCC | 2 cut(s) | 976, 2008 |
| HapII | CCGG | 5 cut(s) | 387, 563, 601, 1699, 1713 |
| HgaI | GACGC | 5 cut(s) | 131, 449, 1035, 2034, 2541 |
| HhaI | GCGC | 6 cut(s) | 142, 508, 783, 888, 3030, 3252 |
| Hin1I | GRCGYC | 4 cut(s) | 123, 2513, 2533, 3245 |
| Hin6I | GCGC | 6 cut(s) | 140, 506, 781, 886, 3028, 3250 |
| HinP1I | GCGC | 6 cut(s) | 140, 506, 781, 886, 3028, 3250 |
| HincII | GTYRAC | 4 cut(s) | 1549, 1627, 2040, 2829 |
| HindII | GTYRAC | 4 cut(s) | 1549, 1627, 2040, 2829 |
| HindIII | AAGCTT | 2 cut(s) | 1083, 2316 |
| HpaII | CCGG | 5 cut(s) | 387, 563, 601, 1699, 1713 |
| HphI | GGTGA | 8 cut(s) | 533, 542, 1918, 1979, 2474, 2616, 2786, 3065 |
| Hpy166II | GTNNAC | 8 cut(s) | 107, 1476, 1549, 1627, 2040, 2068, 2829, 2884 |
| Hpy8I | GTNNAC | 8 cut(s) | 107, 1476, 1549, 1627, 2040, 2068, 2829, 2884 |
| Hpy99I | CGWCG | 5 cut(s) | 125, 407, 2156, 3247, 3250 |
| HpyAV | CCTTC | 8 cut(s) | 1429, 1783, 1897, 2141, 2258, 2279, 2453, 2631 |
| HpyCH4IV | ACGT | 5 cut(s) | 2513, 2989, 3081, 3115, 3245 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 89, 139, 184, 197, 794, 803, 1613, 1808, 3136 |
| HpySE526I | ACGT | 5 cut(s) | 2513, 2989, 3081, 3115, 3245 |
| Hsp92I | GRCGYC | 4 cut(s) | 123, 2513, 2533, 3245 |
| HspAI | GCGC | 6 cut(s) | 140, 506, 781, 886, 3028, 3250 |
| Kpn2I | TCCGGA | 1 cut(s) | 1712 |
| KpnI | GGTACC | 1 cut(s) | 2120 |
| Ksp22I | TGATCA | 2 cut(s) | 1369, 3109 |
| LguI | GCTCTTC | 2 cut(s) | 99, 922 |
| LmnI | GCTCC | 9 cut(s) | 49, 196, 883, 1133, 1394, 2137, 2366, 3142, 3244 |
| LweI | GCATC | 9 cut(s) | 127, 734, 1033, 1508, 1594, 2601, 2710, 3049, 3117 |
| MaeI | CTAG | 2 cut(s) | 737, 2799 |
| MaeII | ACGT | 5 cut(s) | 2513, 2989, 3081, 3115, 3245 |
| MaeIII | GTNAC | 6 cut(s) | 116, 1069, 2189, 2389, 3053, 3285 |
| MbiI | CCGCTC | 1 cut(s) | 2341 |
| MfeI | CAATTG | 1 cut(s) | 2602 |
| MflI | RGATCY | 3 cut(s) | 1568, 1632, 2198 |
| MhlI | GDGCHC | 5 cut(s) | 193, 293, 1673, 2563, 3121 |
| MlyI | GAGTC | 7 cut(s) | 33, 166, 1016, 1090, 1449, 2548, 3006 |
| MmeI | TCCRAC | 4 cut(s) | 194, 753, 1339, 3266 |
| Mph1103I | ATGCAT | 1 cut(s) | 3064 |
| MroI | TCCGGA | 1 cut(s) | 1712 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2355 |
| MslI | CAYNNNNRTG | 1 cut(s) | 3018 |
| MspA1I | CMGCKG | 3 cut(s) | 809, 1961, 2090 |
| MspI | CCGG | 5 cut(s) | 387, 563, 601, 1699, 1713 |
| MspR9I | CCNGG | 3 cut(s) | 660, 1256, 1833 |
| MunI | CAATTG | 1 cut(s) | 2602 |
| Mva1269I | GAATGC | 1 cut(s) | 1595 |
| MvaI | CCWGG | 3 cut(s) | 660, 1256, 1833 |
| MvnI | CGCG | 3 cut(s) | 508, 609, 3250 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 89, 139, 184, 197, 794, 803, 1613, 1808, 3136 |
| NcoI | CCATGG | 1 cut(s) | 544 |
| NdeI | CATATG | 1 cut(s) | 3123 |
| NlaIV | GGNNCC | 4 cut(s) | 1570, 2009, 2118, 3240 |
| NmeAIII | GCCGAG | 1 cut(s) | 356 |
| NmuCI | GTSAC | 3 cut(s) | 2189, 3053, 3285 |
| NsbI | TGCGCA | 1 cut(s) | 141 |
| NsiI | ATGCAT | 1 cut(s) | 3064 |
| NspI | RCATGY | 2 cut(s) | 562, 872 |
| PaeI | GCATGC | 1 cut(s) | 562 |
| PagI | TCATGA | 1 cut(s) | 2704 |
| PciSI | GCTCTTC | 2 cut(s) | 99, 922 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 411, 447 |
| PctI | GAATGC | 1 cut(s) | 1595 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2355 |
| PleI | GAGTC | 7 cut(s) | 33, 166, 1015, 1090, 1449, 2548, 3005 |
| PpsI | GAGTC | 7 cut(s) | 33, 166, 1015, 1090, 1449, 2548, 3005 |
| PpuMI | RGGWCCY | 1 cut(s) | 656 |
| Psp124BI | GAGCTC | 2 cut(s) | 193, 293 |
| Psp5II | RGGWCCY | 1 cut(s) | 656 |
| Psp6I | CCWGG | 3 cut(s) | 658, 1254, 1831 |
| PspFI | CCCAGC | 2 cut(s) | 797, 2010 |
| PspGI | CCWGG | 3 cut(s) | 658, 1254, 1831 |
| PspN4I | GGNNCC | 4 cut(s) | 1570, 2009, 2118, 3240 |
| PspPI | GGNCC | 2 cut(s) | 656, 2007 |
| PspPPI | RGGWCCY | 1 cut(s) | 656 |
| PstI | CTGCAG | 2 cut(s) | 655, 1105 |
| PstNI | CAGNNNCTG | 4 cut(s) | 260, 592, 659, 1964 |
| PsuI | RGATCY | 3 cut(s) | 1568, 1632, 2198 |
| PvuII | CAGCTG | 2 cut(s) | 1961, 2090 |
| RsaI | GTAC | 4 cut(s) | 572, 2118, 2213, 3281 |
| RsaNI | GTAC | 4 cut(s) | 571, 2117, 2212, 3280 |
| RseI | CAYNNNNRTG | 1 cut(s) | 3018 |
| SacI | GAGCTC | 2 cut(s) | 193, 293 |
| SapI | GCTCTTC | 2 cut(s) | 99, 922 |
| Sau96I | GGNCC | 2 cut(s) | 656, 2007 |
| ScaI | AGTACT | 1 cut(s) | 572 |
| SchI | GAGTC | 7 cut(s) | 33, 166, 1016, 1090, 1449, 2548, 3006 |
| ScrFI | CCNGG | 3 cut(s) | 660, 1256, 1833 |
| SduI | GDGCHC | 5 cut(s) | 193, 293, 1673, 2563, 3121 |
| SfaNI | GCATC | 9 cut(s) | 127, 734, 1033, 1508, 1594, 2601, 2710, 3049, 3117 |
| SfcI | CTRYAG | 4 cut(s) | 651, 753, 1101, 2820 |
| SinI | GGWCC | 1 cut(s) | 656 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 3018 |
| SmlI | CTYRAG | 3 cut(s) | 292, 1223, 2019 |
| SmoI | CTYRAG | 3 cut(s) | 292, 1223, 2019 |
| SphI | GCATGC | 1 cut(s) | 562 |
| SspMI | CTAG | 2 cut(s) | 737, 2799 |
| SstI | GAGCTC | 2 cut(s) | 193, 293 |
| StyD4I | CCNGG | 3 cut(s) | 658, 1254, 1831 |
| StyI | CCWWGG | 3 cut(s) | 87, 544, 1182 |
| TaiI | ACGT | 5 cut(s) | 2516, 2992, 3084, 3118, 3248 |
| TaqII | GACCGA | 1 cut(s) | 1461 |
| TatI | WGTACW | 2 cut(s) | 570, 3279 |
| TauI | GCSGC | 5 cut(s) | 86, 383, 617, 812, 2261 |
| TscAI | CASTG | 6 cut(s) | 479, 1006, 1984, 2109, 2194, 3294 |
| TseFI | GTSAC | 3 cut(s) | 2189, 3053, 3285 |
| Tsp45I | GTSAC | 3 cut(s) | 2189, 3053, 3285 |
| TspGWI | ACGGA | 3 cut(s) | 59, 1412, 2609 |
| TspRI | CASTG | 6 cut(s) | 479, 1006, 1984, 2109, 2194, 3294 |
| VpaK11BI | GGWCC | 1 cut(s) | 656 |
| XceI | RCATGY | 2 cut(s) | 562, 872 |
| XmiI | GTMKAC | 1 cut(s) | 1475 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2355 |
| XspI | CTAG | 2 cut(s) | 737, 2799 |
| ZraI | GACGTC | 2 cut(s) | 2514, 3246 |
| ZrmI | AGTACT | 1 cut(s) | 572 |
| Zsp2I | ATGCAT | 1 cut(s) | 3064 |