Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0003601

Physical Location & Seq

Genomic Coordinates Reverse (-)

23353147 .. 23359601

Gene Structure 6455 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g21810.11

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3123 bp

ATGTCCAAAGAAAACGTTCAGACGTATGGCGGAGGGCTCACGGCGGAACAAAGAAACCGCATCTCTCGGAATTTCAGAGCCGCCAAGGCCCTCATTGATCGCAAACGCCCCCGCAACGACGCCGTTTCACCTAATCATCACCTCCCTCATACCAAAATTTGTGGCGGAAATGGAATCCAAACGCCAGCTCAGCTCAATAGAGTTCAAAGAACTCCTCTTGCCGAGCTACCGATGAACACACCGCCTCCGATTTCCGCGAGCCGGTACAATTCAGCGCGTGGTGAATATGGCAGTGCTTCGTGTTCCGGGAGCTTAAGCATTAGCCGGATTGAATCAAGCGTGTCAAAATCGGATTCTTTCACAACTCCAATCGGACAACCGCATTTTCCGACTTCATTCAGTTCTTTCTCTGCACGTGGAATTCTTGGCGATGATGATTTCGATGAGAGTATTTTGCAGGAAATTGACGCTTTAATCGAGCAGAAACCGAGTGTGGACATTCAGCGTGATGATATTGGGAGTTGTGGTAGTGATGTTAGTGCCGCATCAGCGCCGCCTTTGAGTAGTGAAAACCAAACAGATTCTGTTAACCATGGATTGCCTAACATGCCGGATGAGTATTCGAAGTATTTGCTATCTCTCAATGAAAGGCAGCGCGAGGCAGCTTGCAGCGATATTTCAGTACCTTTGATGATTGTTGCCGGCCCTGGAAGTGGAAAGACTTCAACGATGGTTGGGCGCGTTCTAATGCTGCTCAATGAGGGCATTAGCGCGTCAAACATTCTAGCAATGACTTTCACTACAGCAGCAGCTTCCGAGATGAGAGATCGAATTGGAGCCGTGACTGGGAAACCAACGGCAAAACTACTTACAATCAGCACATTTCATTCATTTTCGTTGCAACTTTGCCGATCACATGCTGAGAAACTCGAACGCACACCAGAATTTTTGATATATGGACATGGGCAACAGAGAAGAGCAATCATTGAAGCTGTGCGGTTATCAGAAGACGAAAAGAGTAAAACGAACCTTAATGTTGCTATAGATGGGGAAGAATCTAACGGTGTAACGTCTCCACATCATTTTAAGGATGCATCAAAGAAATGGCTGAAGTTTGTGACACAGGCAAAAGCTTCTGGAAAGACTCCTGCTGAATGCCGAAGAATGGGTGATGTGACAGAAGGCGAAATTCTTAGGAATTACAATGATATCTTAAAATCGTGCAATGCTTTAGACTACCACGACTTAATTAGCTGCTCTGTGATGCTGCTAAGTGATTTTCCTGAAGTGTTGAAGGAGTGCCAGGAGTTATGGAAAGCTATTGTAATAGATGAGTTTCAAGACACAAGTGCTATGCAATATAGTCTTTTGCGGATTCTCTCATCTCATAACCATATAACCATTGTTGGTGATGATGATCAGTCCATTTTCAGTTTCAATGGGGCAGACATTTCTGGTTTTGAGTCCTTTCGTAAAGATTTTTCAAATTACAAAGAGATTAGGCTTAATAAAAACTATCGGTCCACACGCTATATTGTGGAAGCTGCATCTTCTGTTATAAAAAACAATAAGAAGCGATGCCAATTAAAGAATGTTGACACCGACAATTCTTCTGGGTCTAAGGTAATTATCAAGGAAAGTCACAATGAGGATGCACAATGCGCCTTTGTTGTAGACAAGATCCTGGAGACTGCATCTAAACGGTCAGAAGCAGGGTGCTCCTATGGAAGCATAGCAATCCTTTACCGGAGGCAGGTCAAGCTTACTTTCCCTAGTACTAATGTGAATGAGGTATCAGGAAAAGTCTTCCAGACAGCCTTGCGTGAAAGGAAAATACCATTTAATGTTCATGGAGTGGCCGTTTATAGGAAGAAGGTAGTTAGAGCCATTATTGCTATGATTAAAACGACTTTGCCTGGTTGTGATGATGGATCATATAGGCAAGTCTTCAAGGCTTTACTTCCTTTTGAGAAAGAGGAAAAGAAGAAGGTGATCGATTATATCGACAAAATTTTGACTCATAGAAAATGCAGCTTCATATCAGCTGCTTGTGACATCTTTAGTGCAAAACTTTCTGGTACCTTGAAGAGGACTCAGCTTACCCAGGGACGCAAGGTGCTGTTAACATTAGAGATGATTTCAAAACTTGTTCTCAGGGAACAATCGATTTCAGCTGTCATAACCTCAGTTGCGAATATGGTACCACAGAAGTACCTTCTTGAGCAACGTGCGGTCGTGGATGTAGATGGAGGAAAACTGCTGAATGAAGACAATGACATGAGATCTGTTCTTCAGTACCTACTGGACGACATATCTGATTTCTTATCAACTCATTTTGTTGCGGGAGAAGGGGAGAGAGAAGTCATAGCAGAAGAAAAAGGCTGTGTTAATTTACTCAAAGCTTTCATCGACTACATATCTGAGCGGGAGAGTGAAAATTTTCGCTCCCGAAGACATGACAACCAAAGTTCTGTCACTTTGACTACCATTCATCAGTCAAAAGGTTTAGAGTGGGATATAGTTTTCATAATTAAGGTAAATGAATCTGAGATTCCGTTGTTGCATGAATTCAATGGCATTGCAAAAGAGAATGGGACCTCCATTGAGGAGGAAAGGCGCCTCTTATATGTTGCAATGACTCGTGCTCGAAAAAAGCTTTTCATTCTTTATGTTACGATGGATTCCAGTTGGCAGATGCTTCAACCTTCGCGATTTCTGAAAGAAATTCCAAATCATCTACGAGAAGTCCAGGCTGACGTAAGTACAGAAGGCTTACAATCAAAGCATCATGATACTTCAAAAGAATCTATTCCATTGACAGATGATCCCAAACCAAACCTCCTACCTCCTGAAGTTGTTATGGTGCAAAATGATCTCCATCACAGTAAATTTGACGATGCTTCTGCAGAATTGATGGAATTTGGGGAGGAAAACCATGGAAATGGTTTCTTAAAAAGATTCAGTGTGGATGAGAGATCGATTATCTCGCATTTATTTAATGACTGGGCTAAGAAGCAAGCGTTTCAAGATCCTAAGAGATTACTTGACAAGGTCGGTTTTGTAATAGATGAACGCATACGAGCCAAGAACTACAAACACAAGGTCATAAATTTAGTCCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003678 GO:0003824 GO:0004386 GO:0006139 GO:0006259 GO:0006310 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0032392 GO:0032508 GO:0034641 GO:0036292 GO:0043138 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0046483 GO:0051276 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0140097 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UvrD-helicase UvrD_C

Protein Analysis

1041

Amino Acids

116.44

Weight (kDa)

7.35

Isoelectric Point (pI)

38.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003601)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25120
fragaria_vesca	FvH4_7g26710 FvH4_7g26710 FvH4_7g26710 FvH4_7g26710
malus_domestica	MD07G1241600.v1.1 MD07G1241700.v1.1 MD07G1243100.v1.1 MD07G1243600.v1.1 MD07G1244100.v1.1 MD07G1244200.v1.1 MD07G1244300.v1.1 MD07G1244800.v1.1 MD07G1245200.v1.1 MD07G1245700.v1.1 MD07G1245800.v1.1
prunus_persica	Prupe.2G270600_v2.0.a1 Prupe.2G270600_v2.0.a1
pyrus_communis	pycom07g21810 pycom07g21980
rosa_chinensis	RchiOBHm_Chr1g0373301
rosa_laevigata	RLG00000001620 RLG00000006922 RLG00000035899
rosa_multiflora	Rmu_ssc0000435.1_g000004
rosa_roxburghii	Rroxscaffold_4G00284280
rosa_rugosa	Rorug01G0376900
rosa_samantha	Rh1AG385900 Rh1BG350100 Rh1CG363200 Rh1DG380900 Rh3CG316100 Rh5CG053300 Rh5DG386500
rosa_wichuraiana	Rw1G034900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1559
Acc36I	ACCTGC	1 cut(s)	1744
Acc65I	GGTACC	2 cut(s)	2078, 2200
AccB1I	GGYRCC	3 cut(s)	2078, 2200, 2616
AccBSI	CCGCTC	1 cut(s)	2425
AccI	GTMKAC	1 cut(s)	1674
AccII	CGCG	6 cut(s)	257, 277, 657, 741, 773, 2710
AclI	AACGTT	1 cut(s)	15
AclWI	GGATC	4 cut(s)	1675, 1939, 2819, 3023
AcoI	YGGCCR	1 cut(s)	1857
AcuI	CTGAAG	4 cut(s)	1130, 1305, 2276, 2871
AcvI	CACGTG	1 cut(s)	416
AcyI	GRCGYC	2 cut(s)	120, 2617
AfaI	GTAC	8 cut(s)	266, 684, 1777, 2080, 2202, 2213, 2297, 2764
AfiI	CCNNNNNNNGG	7 cut(s)	261, 713, 846, 1165, 1753, 1866, 2088
AflII	CTTAAG	1 cut(s)	313
AjnI	CCWGG	6 cut(s)	706, 1302, 1683, 1915, 2103, 2748
Alw21I	GWGCWC	2 cut(s)	1721, 2647
Alw26I	GTCTC	2 cut(s)	1077, 1682
AlwI	GGATC	4 cut(s)	1675, 1939, 2819, 3023
AlwNI	CAGNNNCTG	1 cut(s)	584
AoxI	GGCC	3 cut(s)	87, 703, 1857
ArsI	GACNNNNNNTTYG	2 cut(s)	3087, 3119
Asp700I	GAANNNNTTC	4 cut(s)	15, 721, 2439, 2808
Asp718I	GGTACC	2 cut(s)	2078, 2200
AspLEI	GCGC	7 cut(s)	277, 553, 657, 741, 773, 1664, 2619
AspS9I	GGNCC	4 cut(s)	88, 704, 1521, 2595
AsuC2I	CCSGG	1 cut(s)	307
AsuHPI	GGTGA	6 cut(s)	120, 131, 293, 1181, 1421, 2002
AsuII	TTCGAA	1 cut(s)	623
AvaII	GGWCC	2 cut(s)	1521, 2595
BaeI	ACNNNNGTAYC	2 cut(s)	2195, 2228
BanI	GGYRCC	3 cut(s)	2078, 2200, 2616
BanII	GRGCYC	1 cut(s)	39
BauI	CACGAG	1 cut(s)	2640
BbrPI	CACGTG	1 cut(s)	416
BbsI	GAAGAC	5 cut(s)	1014, 1798, 1939, 2274, 2458
Bbv12I	GWGCWC	2 cut(s)	1721, 2647
BccI	CCATC	7 cut(s)	724, 1040, 1922, 2240, 2671, 2886, 2908
BceAI	ACGGC	5 cut(s)	57, 107, 824, 873, 1844
BcgI	CGANNNNNNTGC	4 cut(s)	613, 647, 2885, 2919
BciT130I	CCWGG	6 cut(s)	708, 1304, 1685, 1917, 2105, 2750
BclI	TGATCA	1 cut(s)	1417
BcnI	CCSGG	1 cut(s)	307
BcoDI	GTCTC	2 cut(s)	1077, 1682
BfaI	CTAG	2 cut(s)	785, 1773
BfmI	CTRYAG	3 cut(s)	801, 1041, 2904
BfoI	RGCGCY	2 cut(s)	554, 2620
BfrI	CTTAAG	1 cut(s)	313
BfuAI	ACCTGC	1 cut(s)	1744
BglI	GCCNNNNNGGC	1 cut(s)	86
BglII	AGATCT	1 cut(s)	2282
BlpI	GCTNAGC	1 cut(s)	189
BmcAI	AGTACT	1 cut(s)	1777
Bme1390I	CCNGG	7 cut(s)	307, 708, 1304, 1685, 1917, 2105, 2750
Bme18I	GGWCC	2 cut(s)	1521, 2595
BmgT120I	GGNCC	4 cut(s)	88, 704, 1521, 2595
BmiI	GGNNCC	5 cut(s)	838, 2080, 2202, 2596, 2618
BmrFI	CCNGG	7 cut(s)	307, 708, 1304, 1685, 1917, 2105, 2750
BmrI	ACTGGG	2 cut(s)	855, 3013
BmuI	ACTGGG	2 cut(s)	855, 3013
BpiI	GAAGAC	5 cut(s)	1014, 1798, 1939, 2274, 2458
BpmI	CTGGAG	1 cut(s)	1706
Bpu1102I	GCTNAGC	1 cut(s)	189
Bpu14I	TTCGAA	1 cut(s)	623
BpuEI	CTTGAG	1 cut(s)	2240
BpuMI	CCSGG	1 cut(s)	307
Bsa29I	ATCGAT	3 cut(s)	1995, 2165, 2978
BsaAI	YACGTR	1 cut(s)	416
BsaBI	GATNNNNATC	2 cut(s)	1416, 2877
BsaHI	GRCGYC	2 cut(s)	120, 2617
BsaJI	CCNNGG	6 cut(s)	84, 592, 706, 2103, 2104, 2935
BsaWI	WCCGGW	1 cut(s)	1746
BsaXI	ACNNNNNCTCC	8 cut(s)	229, 259, 511, 541, 1845, 1875, 2823, 2853
Bsc4I	CCNNNNNNNGG	7 cut(s)	261, 713, 846, 1165, 1753, 1866, 2088
Bse118I	RCCGGY	2 cut(s)	261, 701
Bse1I	ACTGG	4 cut(s)	850, 2307, 2685, 3008
Bse3DI	GCAATG	4 cut(s)	795, 1231, 2577, 2640
Bse8I	GATNNNNATC	2 cut(s)	1416, 2877
BseBI	CCWGG	6 cut(s)	708, 1304, 1685, 1917, 2105, 2750
BseCI	ATCGAT	3 cut(s)	1995, 2165, 2978
BseDI	CCNNGG	6 cut(s)	84, 592, 706, 2103, 2104, 2935
BseGI	GGATG	5 cut(s)	619, 1096, 1657, 2245, 2974
BseJI	GATNNNNATC	2 cut(s)	1416, 2877
BseLI	CCNNNNNNNGG	7 cut(s)	261, 713, 846, 1165, 1753, 1866, 2088
BseMI	GCAATG	4 cut(s)	795, 1231, 2577, 2640
BseMII	CTCAG	7 cut(s)	203, 912, 2108, 2167, 2199, 2412, 2538
BseNI	ACTGG	4 cut(s)	850, 2307, 2685, 3008
BseRI	GAGGAG	2 cut(s)	204, 2621
BsgI	GTGCAG	1 cut(s)	396
Bsh1236I	CGCG	6 cut(s)	257, 277, 657, 741, 773, 2710
Bsh1285I	CGRYCG	1 cut(s)	2235
BshFI	GGCC	3 cut(s)	89, 705, 1859
BshNI	GGYRCC	3 cut(s)	2078, 2200, 2616
BshVI	ATCGAT	3 cut(s)	1995, 2165, 2978
BsiEI	CGRYCG	1 cut(s)	2235
BsiHKAI	GWGCWC	2 cut(s)	1721, 2647
BsiSI	CCGG	6 cut(s)	262, 306, 325, 611, 702, 1747
BslFI	GGGAC	2 cut(s)	2121, 2608
BslI	CCNNNNNNNGG	7 cut(s)	261, 713, 846, 1165, 1753, 1866, 2088
BsmAI	GTCTC	2 cut(s)	1077, 1682
BsmBI	CGTCTC	1 cut(s)	1077
BsmFI	GGGAC	2 cut(s)	2121, 2608
BsmI	GAATGC	1 cut(s)	1160
BsnI	GGCC	3 cut(s)	89, 705, 1859
Bsp119I	TTCGAA	1 cut(s)	623
Bsp1286I	GDGCHC	3 cut(s)	39, 1721, 2647
Bsp1720I	GCTNAGC	1 cut(s)	189
Bsp19I	CCATGG	2 cut(s)	592, 2935
Bsp68I	TCGCGA	1 cut(s)	2710
BspANI	GGCC	3 cut(s)	89, 705, 1859
BspCNI	CTCAG	7 cut(s)	202, 913, 2107, 2166, 2198, 2413, 2539
BspDI	ATCGAT	3 cut(s)	1995, 2165, 2978
BspFNI	CGCG	6 cut(s)	257, 277, 657, 741, 773, 2710
BspHI	TCATGA	1 cut(s)	2788
BspLI	GGNNCC	5 cut(s)	838, 2080, 2202, 2596, 2618
BspMAI	CTGCAG	1 cut(s)	2908
BspMI	ACCTGC	1 cut(s)	1744
BspPI	GGATC	4 cut(s)	1675, 1939, 2819, 3023
BspQI	GCTCTTC	1 cut(s)	970
BspT104I	TTCGAA	1 cut(s)	623
BspT107I	GGYRCC	3 cut(s)	2078, 2200, 2616
BspTI	CTTAAG	1 cut(s)	313
BsrBI	CCGCTC	1 cut(s)	2425
BsrDI	GCAATG	4 cut(s)	795, 1231, 2577, 2640
BsrFI	RCCGGY	2 cut(s)	261, 701
BsrI	ACTGG	4 cut(s)	850, 2307, 2685, 3008
BssAI	RCCGGY	2 cut(s)	261, 701
BssECI	CCNNGG	6 cut(s)	84, 592, 706, 2103, 2104, 2935
BssNI	GRCGYC	2 cut(s)	120, 2617
BssSI	CACGAG	1 cut(s)	2640
BssT1I	CCWWGG	3 cut(s)	84, 592, 2935
Bst2BI	CACGAG	1 cut(s)	2640
Bst2UI	CCWGG	6 cut(s)	708, 1304, 1685, 1917, 2105, 2750
Bst4CI	ACNGT	3 cut(s)	1064, 1704, 2885
Bst6I	CTCTTC	2 cut(s)	970, 2081
BstACI	GRCGYC	2 cut(s)	120, 2617
BstAFI	CTTAAG	1 cut(s)	313
BstBAI	YACGTR	1 cut(s)	416
BstBI	TTCGAA	1 cut(s)	623
BstC8I	GCNNGC	5 cut(s)	186, 259, 667, 703, 3018
BstDSI	CCRYGG	2 cut(s)	592, 2935
BstENI	CCTNNNNNAGG	1 cut(s)	2086
BstF5I	GGATG	5 cut(s)	619, 1096, 1657, 2245, 2974
BstFNI	CGCG	6 cut(s)	257, 277, 657, 741, 773, 2710
BstH2I	RGCGCY	2 cut(s)	554, 2620
BstHHI	GCGC	7 cut(s)	277, 553, 657, 741, 773, 1664, 2619
BstMAI	GTCTC	2 cut(s)	1077, 1682
BstMCI	CGRYCG	1 cut(s)	2235
BstMWI	GCNNNNNNNGC	7 cut(s)	86, 190, 548, 607, 1661, 1759, 1892
BstNI	CCWGG	6 cut(s)	708, 1304, 1685, 1917, 2105, 2750
BstNSI	RCATGY	2 cut(s)	610, 920
BstSCI	CCNGG	7 cut(s)	305, 706, 1302, 1683, 1915, 2103, 2748
BstSFI	CTRYAG	3 cut(s)	801, 1041, 2904
BstUI	CGCG	6 cut(s)	257, 277, 657, 741, 773, 2710
BstV2I	GAAGAC	5 cut(s)	1014, 1798, 1939, 2274, 2458
BstX2I	RGATCY	3 cut(s)	1680, 2282, 3028
BstXI	CCANNNNNNTGG	1 cut(s)	2942
BstYI	RGATCY	3 cut(s)	1680, 2282, 3028
Bsu15I	ATCGAT	3 cut(s)	1995, 2165, 2978
BsuRI	GGCC	3 cut(s)	89, 705, 1859
BsuTUI	ATCGAT	3 cut(s)	1995, 2165, 2978
BtgI	CCRYGG	2 cut(s)	592, 2935
BtgZI	GCGATG	2 cut(s)	444, 1591
BtsCI	GGATG	5 cut(s)	619, 1096, 1657, 2245, 2974
BtsI	GCAGTG	1 cut(s)	298
BtsIMutI	CAGTG	2 cut(s)	298, 2968
BtuMI	TCGCGA	1 cut(s)	2710
BveI	ACCTGC	1 cut(s)	1744
Cac8I	GCNNGC	5 cut(s)	186, 259, 667, 703, 3018
CaiI	CAGNNNCTG	1 cut(s)	584
CciI	TCATGA	1 cut(s)	2788
CfoI	GCGC	7 cut(s)	277, 553, 657, 741, 773, 1664, 2619
Cfr10I	RCCGGY	2 cut(s)	261, 701
Cfr13I	GGNCC	4 cut(s)	88, 704, 1521, 2595
ClaI	ATCGAT	3 cut(s)	1995, 2165, 2978
CseI	GACGC	4 cut(s)	128, 476, 762, 2118
Csp6I	GTAC	8 cut(s)	265, 683, 1776, 2079, 2201, 2212, 2296, 2763
CspCI	CAANNNNNGTGG	2 cut(s)	142, 177
CviQI	GTAC	8 cut(s)	265, 683, 1776, 2079, 2201, 2212, 2296, 2763
DinI	GGCGCC	1 cut(s)	2618
EaeI	YGGCCR	1 cut(s)	1857
Eam1104I	CTCTTC	2 cut(s)	970, 2081
EarI	CTCTTC	2 cut(s)	970, 2081
EciI	GGCGGA	3 cut(s)	45, 59, 180
Eco130I	CCWWGG	3 cut(s)	84, 592, 2935
Eco24I	GRGCYC	1 cut(s)	39
Eco32I	GATATC	1 cut(s)	1210
Eco47I	GGWCC	2 cut(s)	1521, 2595
Eco57I	CTGAAG	4 cut(s)	1130, 1305, 2276, 2871
Eco72I	CACGTG	1 cut(s)	416
EcoNI	CCTNNNNNAGG	1 cut(s)	2086
EcoO109I	RGGNCCY	2 cut(s)	88, 2595
EcoRI	GAATTC	2 cut(s)	420, 2567
EcoRII	CCWGG	6 cut(s)	706, 1302, 1683, 1915, 2103, 2748
EcoRV	GATATC	1 cut(s)	1210
EcoT14I	CCWWGG	3 cut(s)	84, 592, 2935
EcoT22I	ATGCAT	1 cut(s)	1096
EcoT38I	GRGCYC	1 cut(s)	39
EgeI	GGCGCC	1 cut(s)	2618
EheI	GGCGCC	1 cut(s)	2618
ErhI	CCWWGG	3 cut(s)	84, 592, 2935
Esp3I	CGTCTC	1 cut(s)	1077
FaqI	GGGAC	2 cut(s)	2121, 2608
FauI	CCCGC	3 cut(s)	119, 2335, 2418
FbaI	TGATCA	1 cut(s)	1417
FblI	GTMKAC	1 cut(s)	1674
FokI	GGATG	5 cut(s)	626, 1103, 1664, 2252, 2981
FriOI	GRGCYC	1 cut(s)	39
FspBI	CTAG	2 cut(s)	785, 1773
GlaI	GCGC	7 cut(s)	276, 552, 656, 740, 772, 1663, 2618
GsuI	CTGGAG	1 cut(s)	1706
HaeII	RGCGCY	2 cut(s)	554, 2620
HaeIII	GGCC	3 cut(s)	89, 705, 1859
HapII	CCGG	6 cut(s)	262, 306, 325, 611, 702, 1747
HgaI	GACGC	4 cut(s)	128, 476, 762, 2118
HhaI	GCGC	7 cut(s)	277, 553, 657, 741, 773, 1664, 2619
Hin1I	GRCGYC	2 cut(s)	120, 2617
Hin6I	GCGC	7 cut(s)	275, 551, 655, 739, 771, 1662, 2617
HinP1I	GCGC	7 cut(s)	275, 551, 655, 739, 771, 1662, 2617
HincII	GTYRAC	3 cut(s)	589, 1597, 2124
HindII	GTYRAC	3 cut(s)	589, 1597, 2124
HindIII	AAGCTT	4 cut(s)	1131, 1760, 2400, 2654
HpaI	GTTAAC	2 cut(s)	589, 2124
HpaII	CCGG	6 cut(s)	262, 306, 325, 611, 702, 1747
HphI	GGTGA	6 cut(s)	120, 131, 293, 1181, 1421, 2002
Hpy166II	GTNNAC	6 cut(s)	496, 589, 1524, 1597, 1675, 2124
Hpy8I	GTNNAC	6 cut(s)	496, 589, 1524, 1597, 1675, 2124
Hpy99I	CGWCG	1 cut(s)	122
HpyAV	CCTTC	8 cut(s)	1175, 1288, 1867, 1981, 2225, 2342, 2715, 2762
HpyCH4III	ACNGT	3 cut(s)	1064, 1704, 2885
HpyCH4IV	ACGT	6 cut(s)	15, 23, 415, 1070, 2227, 2757
HpyF10VI	GCNNNNNNNGC	7 cut(s)	86, 190, 548, 607, 1661, 1759, 1892
HpySE526I	ACGT	6 cut(s)	15, 23, 415, 1070, 2227, 2757
Hsp92I	GRCGYC	2 cut(s)	120, 2617
HspAI	GCGC	7 cut(s)	275, 551, 655, 739, 771, 1662, 2617
KasI	GGCGCC	1 cut(s)	2616
KpnI	GGTACC	2 cut(s)	2082, 2204
KroI	GCCGGC	1 cut(s)	701
KroNI	GCCGGC	1 cut(s)	703
Ksp22I	TGATCA	1 cut(s)	1417
KspAI	GTTAAC	2 cut(s)	589, 2124
LguI	GCTCTTC	1 cut(s)	970
LmnI	GCTCC	4 cut(s)	309, 836, 1724, 2450
MaeI	CTAG	2 cut(s)	785, 1773
MaeII	ACGT	6 cut(s)	15, 23, 415, 1070, 2227, 2757
MaeIII	GTNAC	8 cut(s)	841, 1066, 1117, 1174, 1640, 2051, 2473, 2671
MbiI	CCGCTC	1 cut(s)	2425
MflI	RGATCY	3 cut(s)	1680, 2282, 3028
MhlI	GDGCHC	3 cut(s)	39, 1721, 2647
Mly113I	GGCGCC	1 cut(s)	2617
MlyI	GAGTC	5 cut(s)	1138, 1472, 2011, 2086, 2632
MmeI	TCCRAC	1 cut(s)	413
Mph1103I	ATGCAT	1 cut(s)	1096
MroNI	GCCGGC	1 cut(s)	701
MroXI	GAANNNNTTC	4 cut(s)	15, 721, 2439, 2808
MslI	CAYNNNNRTG	1 cut(s)	2940
MspA1I	CMGCKG	2 cut(s)	2045, 2174
MspCI	CTTAAG	1 cut(s)	313
MspI	CCGG	6 cut(s)	262, 306, 325, 611, 702, 1747
MspR9I	CCNGG	7 cut(s)	307, 708, 1304, 1685, 1917, 2105, 2750
Mva1269I	GAATGC	1 cut(s)	1160
MvaI	CCWGG	6 cut(s)	708, 1304, 1685, 1917, 2105, 2750
MvnI	CGCG	6 cut(s)	257, 277, 657, 741, 773, 2710
MwoI	GCNNNNNNNGC	7 cut(s)	86, 190, 548, 607, 1661, 1759, 1892
NaeI	GCCGGC	1 cut(s)	703
NarI	GGCGCC	1 cut(s)	2617
NciI	CCSGG	1 cut(s)	307
NcoI	CCATGG	2 cut(s)	592, 2935
NgoMIV	GCCGGC	1 cut(s)	701
NlaIV	GGNNCC	5 cut(s)	838, 2080, 2202, 2596, 2618
NmeAIII	GCCGAG	1 cut(s)	247
NmuCI	GTSAC	6 cut(s)	841, 1117, 1174, 1640, 2051, 2473
NruI	TCGCGA	1 cut(s)	2710
NsiI	ATGCAT	1 cut(s)	1096
NspI	RCATGY	2 cut(s)	610, 920
NspV	TTCGAA	1 cut(s)	623
PagI	TCATGA	1 cut(s)	2788
PasI	CCCWGGG	1 cut(s)	2104
PciSI	GCTCTTC	1 cut(s)	970
PcsI	WCGNNNNNNNCGW	2 cut(s)	474, 2001
PctI	GAATGC	1 cut(s)	1160
PdiI	GCCGGC	1 cut(s)	703
PdmI	GAANNNNTTC	4 cut(s)	15, 721, 2439, 2808
PflFI	GACNNNGTC	1 cut(s)	3050
PfoI	TCCNGGA	2 cut(s)	305, 1683
PleI	GAGTC	5 cut(s)	1138, 1471, 2011, 2086, 2632
PluTI	GGCGCC	1 cut(s)	2620
PmaCI	CACGTG	1 cut(s)	416
PmlI	CACGTG	1 cut(s)	416
PpsI	GAGTC	5 cut(s)	1138, 1471, 2011, 2086, 2632
Ppu21I	YACGTR	1 cut(s)	416
PpuMI	RGGWCCY	1 cut(s)	2595
PsiI	TTATAA	1 cut(s)	1559
Psp1406I	AACGTT	1 cut(s)	15
Psp5II	RGGWCCY	1 cut(s)	2595
Psp6I	CCWGG	6 cut(s)	706, 1302, 1683, 1915, 2103, 2748
PspCI	CACGTG	1 cut(s)	416
PspGI	CCWGG	6 cut(s)	706, 1302, 1683, 1915, 2103, 2748
PspN4I	GGNNCC	5 cut(s)	838, 2080, 2202, 2596, 2618
PspPI	GGNCC	4 cut(s)	88, 704, 1521, 2595
PspPPI	RGGWCCY	1 cut(s)	2595
PstI	CTGCAG	1 cut(s)	2908
PstNI	CAGNNNCTG	1 cut(s)	584
PsuI	RGATCY	3 cut(s)	1680, 2282, 3028
PsyI	GACNNNGTC	1 cut(s)	3050
PvuII	CAGCTG	2 cut(s)	2045, 2174
RruI	TCGCGA	1 cut(s)	2710
RsaI	GTAC	8 cut(s)	266, 684, 1777, 2080, 2202, 2213, 2297, 2764
RsaNI	GTAC	8 cut(s)	265, 683, 1776, 2079, 2201, 2212, 2296, 2763
RseI	CAYNNNNRTG	1 cut(s)	2940
SapI	GCTCTTC	1 cut(s)	970
Sau96I	GGNCC	4 cut(s)	88, 704, 1521, 2595
ScaI	AGTACT	1 cut(s)	1777
SchI	GAGTC	5 cut(s)	1138, 1472, 2011, 2086, 2632
ScrFI	CCNGG	7 cut(s)	307, 708, 1304, 1685, 1917, 2105, 2750
SduI	GDGCHC	3 cut(s)	39, 1721, 2647
SfcI	CTRYAG	3 cut(s)	801, 1041, 2904
SfoI	GGCGCC	1 cut(s)	2618
SfuI	TTCGAA	1 cut(s)	623
SinI	GGWCC	2 cut(s)	1521, 2595
SmiMI	CAYNNNNRTG	1 cut(s)	2940
SmlI	CTYRAG	2 cut(s)	313, 2219
SmoI	CTYRAG	2 cut(s)	313, 2219
SspDI	GGCGCC	1 cut(s)	2616
SspMI	CTAG	2 cut(s)	785, 1773
StyD4I	CCNGG	7 cut(s)	305, 706, 1302, 1683, 1915, 2103, 2748
StyI	CCWWGG	3 cut(s)	84, 592, 2935
TaaI	ACNGT	3 cut(s)	1064, 1704, 2885
TaiI	ACGT	6 cut(s)	18, 26, 418, 1073, 2230, 2760
TaqII	GACCGA	1 cut(s)	1509
TatI	WGTACW	2 cut(s)	1775, 2762
TauI	GCSGC	3 cut(s)	83, 545, 556
TscAI	CASTG	2 cut(s)	298, 2968
TseFI	GTSAC	6 cut(s)	841, 1117, 1174, 1640, 2051, 2473
Tsp45I	GTSAC	6 cut(s)	841, 1117, 1174, 1640, 2051, 2473
TspGWI	ACGGA	1 cut(s)	2544
TspRI	CASTG	2 cut(s)	298, 2968
Tth111I	GACNNNGTC	1 cut(s)	3050
Vha464I	CTTAAG	1 cut(s)	313
VpaK11BI	GGWCC	2 cut(s)	1521, 2595
XagI	CCTNNNNNAGG	1 cut(s)	2086
XceI	RCATGY	2 cut(s)	610, 920
XmiI	GTMKAC	1 cut(s)	1674
XmnI	GAANNNNTTC	4 cut(s)	15, 721, 2439, 2808
XspI	CTAG	2 cut(s)	785, 1773
ZrmI	AGTACT	1 cut(s)	1777
Zsp2I	ATGCAT	1 cut(s)	1096

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.