Belongs to the chalcone isomerase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G55120 |
| fragaria_vesca | FvH4_7g20870 |
| malus_domestica | MD01G1117800.v1.1 MD01G1118000.v1.1 MD01G1118100.v1.1 MD01G1118300.v1.1 MD07G1186300.v1.1 MD07G1186400.v1.1 |
| prunus_persica | Prupe.2G225200_v2.0.a1 |
| pyrus_communis | pycom01g14550 pycom07g17740 pycom07g17750 pycom07g17760 pycom07g17770 |
| rosa_chinensis | RchiOBHm_Chr1g0365111 RchiOBHm_Chr7g0221421 RchiOBHm_Chr7g0221431 |
| rosa_laevigata | RLG00000027441 |
| rosa_multiflora | Rmu_co8490591.1_g000001 Rmu_sc0001688.1_g000009 Rmu_sc0024062.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00291420 Rroxscaffold_4G00291930 |
| rosa_rugosa | Rorug01G0319900 |
| rosa_samantha | Rh1AG328600 Rh1BG290200 Rh1CG306900 Rh1DG321800 Rh7AG342300 Rh7CG359900 |
| rosa_wichuraiana | Rw1G029160 Rw7G029060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 419 |
| AccII | CGCG | 1 cut(s) | 1298 |
| AciI | CCGC | 4 cut(s) | 99, 771, 1205, 1296 |
| AclWI | GGATC | 2 cut(s) | 460, 1159 |
| AcoI | YGGCCR | 4 cut(s) | 216, 286, 594, 1293 |
| AcsI | RAATTY | 4 cut(s) | 345, 950, 1044, 1105 |
| AcuI | CTGAAG | 6 cut(s) | 232, 513, 686, 904, 1212, 1365 |
| AcyI | GRCGYC | 1 cut(s) | 420 |
| AdeI | CACNNNGTG | 1 cut(s) | 1118 |
| AfaI | GTAC | 3 cut(s) | 164, 489, 836 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 201, 873, 983 |
| AgsI | TTSAA | 7 cut(s) | 377, 397, 619, 959, 1076, 1096, 1318 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 32, 704 |
| AjnI | CCWGG | 1 cut(s) | 30 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 74, 106, 746, 778 |
| AluBI | AGCT | 7 cut(s) | 468, 497, 677, 862, 1167, 1190, 1196 |
| AluI | AGCT | 7 cut(s) | 468, 497, 677, 862, 1167, 1190, 1196 |
| Alw26I | GTCTC | 1 cut(s) | 32 |
| AlwI | GGATC | 2 cut(s) | 460, 1159 |
| AoxI | GGCC | 5 cut(s) | 216, 286, 594, 985, 1293 |
| ApeKI | GCWGC | 4 cut(s) | 497, 578, 1196, 1277 |
| ApoI | RAATTY | 4 cut(s) | 345, 950, 1044, 1105 |
| AspLEI | GCGC | 3 cut(s) | 104, 422, 776 |
| AspS9I | GGNCC | 1 cut(s) | 938 |
| AsuC2I | CCSGG | 4 cut(s) | 72, 417, 744, 1116 |
| AsuHPI | GGTGA | 4 cut(s) | 121, 520, 793, 1219 |
| AvaII | GGWCC | 1 cut(s) | 938 |
| BalI | TGGCCA | 1 cut(s) | 288 |
| BanI | GGYRCC | 1 cut(s) | 419 |
| BanII | GRGCYC | 2 cut(s) | 77, 749 |
| BbsI | GAAGAC | 2 cut(s) | 385, 1084 |
| BbvCI | CCTCAGC | 1 cut(s) | 858 |
| BbvI | GCAGC | 4 cut(s) | 484, 590, 1183, 1289 |
| BccI | CCATC | 2 cut(s) | 22, 895 |
| BceAI | ACGGC | 7 cut(s) | 164, 165, 179, 231, 836, 837, 851 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 26, 60, 698, 732 |
| BciT130I | CCWGG | 1 cut(s) | 32 |
| BcnI | CCSGG | 4 cut(s) | 72, 417, 744, 1116 |
| BcoDI | GTCTC | 1 cut(s) | 32 |
| BfaI | CTAG | 4 cut(s) | 474, 542, 1173, 1241 |
| BfmI | CTRYAG | 2 cut(s) | 576, 1275 |
| BfoI | RGCGCY | 1 cut(s) | 423 |
| BisI | GCNGC | 7 cut(s) | 100, 498, 579, 772, 1197, 1278, 1296 |
| BlsI | GCNGC | 7 cut(s) | 101, 499, 580, 773, 1198, 1279, 1297 |
| Bme1390I | CCNGG | 5 cut(s) | 32, 72, 417, 744, 1116 |
| Bme18I | GGWCC | 1 cut(s) | 938 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 32, 704 |
| BmgT120I | GGNCC | 1 cut(s) | 938 |
| BmiI | GGNNCC | 4 cut(s) | 6, 76, 421, 748 |
| BmrFI | CCNGG | 5 cut(s) | 32, 72, 417, 744, 1116 |
| BmsI | GCATC | 6 cut(s) | 346, 469, 491, 631, 1045, 1190 |
| BpiI | GAAGAC | 2 cut(s) | 385, 1084 |
| BpmI | CTGGAG | 3 cut(s) | 14, 140, 812 |
| Bpu10I | CCTNAGC | 1 cut(s) | 858 |
| BpuEI | CTTGAG | 2 cut(s) | 407, 1106 |
| BpuMI | CCSGG | 4 cut(s) | 72, 417, 744, 1116 |
| BsaHI | GRCGYC | 1 cut(s) | 420 |
| BsaJI | CCNNGG | 6 cut(s) | 94, 219, 531, 766, 891, 1230 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 427, 457, 1126, 1156 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 201, 873, 983 |
| BseBI | CCWGG | 1 cut(s) | 32 |
| BseDI | CCNNGG | 6 cut(s) | 94, 219, 531, 766, 891, 1230 |
| BseGI | GGATG | 2 cut(s) | 482, 1181 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 201, 873, 983 |
| BseMII | CTCAG | 1 cut(s) | 872 |
| BseRI | GAGGAG | 3 cut(s) | 236, 739, 908 |
| BseX3I | CGGCCG | 1 cut(s) | 216 |
| BseXI | GCAGC | 4 cut(s) | 484, 590, 1183, 1289 |
| Bsh1236I | CGCG | 1 cut(s) | 1298 |
| Bsh1285I | CGRYCG | 4 cut(s) | 156, 219, 552, 1251 |
| BshFI | GGCC | 5 cut(s) | 218, 288, 596, 987, 1295 |
| BshNI | GGYRCC | 1 cut(s) | 419 |
| BsiEI | CGRYCG | 4 cut(s) | 156, 219, 552, 1251 |
| BsiSI | CCGG | 8 cut(s) | 24, 71, 417, 651, 696, 743, 1116, 1350 |
| BslFI | GGGAC | 2 cut(s) | 266, 938 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 201, 873, 983 |
| BsmAI | GTCTC | 1 cut(s) | 32 |
| BsmBI | CGTCTC | 1 cut(s) | 32 |
| BsmFI | GGGAC | 2 cut(s) | 266, 938 |
| BsnI | GGCC | 5 cut(s) | 218, 288, 596, 987, 1295 |
| Bsp1286I | GDGCHC | 2 cut(s) | 77, 749 |
| Bsp143I | GATC | 7 cut(s) | 153, 400, 452, 549, 1099, 1151, 1248 |
| BspACI | CCGC | 4 cut(s) | 99, 771, 1205, 1296 |
| BspANI | GGCC | 5 cut(s) | 218, 288, 596, 987, 1295 |
| BspCNI | CTCAG | 1 cut(s) | 871 |
| BspFNI | CGCG | 1 cut(s) | 1298 |
| BspLI | GGNNCC | 4 cut(s) | 6, 76, 421, 748 |
| BspMAI | CTGCAG | 2 cut(s) | 580, 1279 |
| BspPI | GGATC | 2 cut(s) | 460, 1159 |
| BspT107I | GGYRCC | 1 cut(s) | 419 |
| BssECI | CCNNGG | 6 cut(s) | 94, 219, 531, 766, 891, 1230 |
| BssMI | GATC | 7 cut(s) | 153, 400, 452, 549, 1099, 1151, 1248 |
| BssNI | GRCGYC | 1 cut(s) | 420 |
| Bst2UI | CCWGG | 1 cut(s) | 32 |
| Bst4CI | ACNGT | 6 cut(s) | 57, 508, 566, 687, 729, 1265 |
| BstACI | GRCGYC | 1 cut(s) | 420 |
| BstC8I | GCNNGC | 7 cut(s) | 21, 192, 286, 290, 693, 864, 989 |
| BstDEI | CTNAG | 1 cut(s) | 858 |
| BstF5I | GGATG | 2 cut(s) | 482, 1181 |
| BstFNI | CGCG | 1 cut(s) | 1298 |
| BstH2I | RGCGCY | 1 cut(s) | 423 |
| BstHHI | GCGC | 3 cut(s) | 104, 422, 776 |
| BstKTI | GATC | 7 cut(s) | 156, 403, 455, 552, 1102, 1154, 1251 |
| BstMAI | GTCTC | 1 cut(s) | 32 |
| BstMBI | GATC | 7 cut(s) | 153, 400, 452, 549, 1099, 1151, 1248 |
| BstMCI | CGRYCG | 4 cut(s) | 156, 219, 552, 1251 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1187, 1196, 1202 |
| BstNI | CCWGG | 1 cut(s) | 32 |
| BstSCI | CCNGG | 5 cut(s) | 30, 70, 415, 742, 1114 |
| BstSFI | CTRYAG | 2 cut(s) | 576, 1275 |
| BstUI | CGCG | 1 cut(s) | 1298 |
| BstV1I | GCAGC | 4 cut(s) | 484, 590, 1183, 1289 |
| BstV2I | GAAGAC | 2 cut(s) | 385, 1084 |
| BstZI | CGGCCG | 1 cut(s) | 216 |
| BsuRI | GGCC | 5 cut(s) | 218, 288, 596, 987, 1295 |
| BtsCI | GGATG | 2 cut(s) | 482, 1181 |
| BtsIMutI | CAGTG | 3 cut(s) | 351, 977, 1050 |
| Cac8I | GCNNGC | 7 cut(s) | 21, 192, 286, 290, 693, 864, 989 |
| CfoI | GCGC | 3 cut(s) | 104, 422, 776 |
| Cfr13I | GGNCC | 1 cut(s) | 938 |
| Csp6I | GTAC | 3 cut(s) | 163, 488, 835 |
| CviAII | CATG | 1 cut(s) | 1371 |
| CviQI | GTAC | 3 cut(s) | 163, 488, 835 |
| DdeI | CTNAG | 1 cut(s) | 858 |
| DinI | GGCGCC | 1 cut(s) | 421 |
| DpnI | GATC | 7 cut(s) | 155, 402, 454, 551, 1101, 1153, 1250 |
| DpnII | GATC | 7 cut(s) | 153, 400, 452, 549, 1099, 1151, 1248 |
| DraIII | CACNNNGTG | 1 cut(s) | 1118 |
| DriI | GACNNNNNGTC | 2 cut(s) | 32, 704 |
| EaeI | YGGCCR | 4 cut(s) | 216, 286, 594, 1293 |
| EagI | CGGCCG | 1 cut(s) | 216 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 32, 704 |
| EclXI | CGGCCG | 1 cut(s) | 216 |
| Eco24I | GRGCYC | 2 cut(s) | 77, 749 |
| Eco47I | GGWCC | 1 cut(s) | 938 |
| Eco52I | CGGCCG | 1 cut(s) | 216 |
| Eco57I | CTGAAG | 6 cut(s) | 232, 513, 686, 904, 1212, 1365 |
| EcoRII | CCWGG | 1 cut(s) | 30 |
| EcoT22I | ATGCAT | 2 cut(s) | 484, 1183 |
| EcoT38I | GRGCYC | 2 cut(s) | 77, 749 |
| EgeI | GGCGCC | 1 cut(s) | 421 |
| EheI | GGCGCC | 1 cut(s) | 421 |
| Esp3I | CGTCTC | 1 cut(s) | 32 |
| FaeI | CATG | 1 cut(s) | 1374 |
| FaiI | YATR | 1 cut(s) | 1372 |
| FaqI | GGGAC | 2 cut(s) | 266, 938 |
| FatI | CATG | 1 cut(s) | 1370 |
| Fnu4HI | GCNGC | 7 cut(s) | 100, 498, 579, 772, 1197, 1278, 1296 |
| FokI | GGATG | 2 cut(s) | 469, 1168 |
| FriOI | GRGCYC | 2 cut(s) | 77, 749 |
| Fsp4HI | GCNGC | 7 cut(s) | 100, 498, 579, 772, 1197, 1278, 1296 |
| FspBI | CTAG | 4 cut(s) | 474, 542, 1173, 1241 |
| GlaI | GCGC | 3 cut(s) | 103, 421, 775 |
| GluI | GCNGC | 7 cut(s) | 100, 498, 579, 772, 1197, 1278, 1296 |
| GsuI | CTGGAG | 3 cut(s) | 14, 140, 812 |
| HaeII | RGCGCY | 1 cut(s) | 423 |
| HaeIII | GGCC | 5 cut(s) | 218, 288, 596, 987, 1295 |
| HapII | CCGG | 8 cut(s) | 24, 71, 417, 651, 696, 743, 1116, 1350 |
| HhaI | GCGC | 3 cut(s) | 104, 422, 776 |
| Hin1I | GRCGYC | 1 cut(s) | 420 |
| Hin1II | CATG | 1 cut(s) | 1374 |
| Hin6I | GCGC | 3 cut(s) | 102, 420, 774 |
| HinP1I | GCGC | 3 cut(s) | 102, 420, 774 |
| HincII | GTYRAC | 1 cut(s) | 228 |
| HindII | GTYRAC | 1 cut(s) | 228 |
| HinfI | GANTC | 9 cut(s) | 27, 124, 233, 545, 632, 796, 905, 1244, 1331 |
| HpaII | CCGG | 8 cut(s) | 24, 71, 417, 651, 696, 743, 1116, 1350 |
| HphI | GGTGA | 4 cut(s) | 121, 520, 793, 1219 |
| Hpy166II | GTNNAC | 5 cut(s) | 147, 163, 228, 819, 835 |
| Hpy188III | TCNNGA | 7 cut(s) | 37, 139, 474, 542, 811, 1173, 1241 |
| Hpy8I | GTNNAC | 5 cut(s) | 147, 163, 228, 819, 835 |
| Hpy99I | CGWCG | 1 cut(s) | 691 |
| HpyAV | CCTTC | 4 cut(s) | 199, 356, 871, 1055 |
| HpyCH4III | ACNGT | 6 cut(s) | 57, 508, 566, 687, 729, 1265 |
| HpyCH4V | TGCA | 9 cut(s) | 359, 482, 500, 578, 1058, 1181, 1199, 1277, 1326 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1187, 1196, 1202 |
| HpyF3I | CTNAG | 1 cut(s) | 858 |
| Hsp92I | GRCGYC | 1 cut(s) | 420 |
| Hsp92II | CATG | 1 cut(s) | 1374 |
| HspAI | GCGC | 3 cut(s) | 102, 420, 774 |
| KasI | GGCGCC | 1 cut(s) | 419 |
| Kzo9I | GATC | 7 cut(s) | 153, 400, 452, 549, 1099, 1151, 1248 |
| LmnI | GCTCC | 4 cut(s) | 10, 80, 682, 752 |
| Lsp1109I | GCAGC | 4 cut(s) | 484, 590, 1183, 1289 |
| LweI | GCATC | 6 cut(s) | 346, 469, 491, 631, 1045, 1190 |
| MaeI | CTAG | 4 cut(s) | 474, 542, 1173, 1241 |
| MaeIII | GTNAC | 4 cut(s) | 259, 266, 931, 961 |
| MalI | GATC | 7 cut(s) | 155, 402, 454, 551, 1101, 1153, 1250 |
| MboI | GATC | 7 cut(s) | 153, 400, 452, 549, 1099, 1151, 1248 |
| MboII | GAAGA | 5 cut(s) | 238, 271, 385, 910, 1084 |
| MhlI | GDGCHC | 2 cut(s) | 77, 749 |
| MlsI | TGGCCA | 1 cut(s) | 288 |
| MluCI | AATT | 8 cut(s) | 316, 345, 611, 950, 1015, 1044, 1105, 1310 |
| MluNI | TGGCCA | 1 cut(s) | 288 |
| Mly113I | GGCGCC | 1 cut(s) | 420 |
| MlyI | GAGTC | 5 cut(s) | 21, 242, 554, 914, 1253 |
| MmeI | TCCRAC | 5 cut(s) | 32, 535, 777, 1021, 1234 |
| Mox20I | TGGCCA | 1 cut(s) | 288 |
| Mph1103I | ATGCAT | 2 cut(s) | 484, 1183 |
| MscI | TGGCCA | 1 cut(s) | 288 |
| MseI | TTAA | 2 cut(s) | 198, 870 |
| MslI | CAYNNNNRTG | 1 cut(s) | 959 |
| Msp20I | TGGCCA | 1 cut(s) | 288 |
| MspI | CCGG | 8 cut(s) | 24, 71, 417, 651, 696, 743, 1116, 1350 |
| MspR9I | CCNGG | 5 cut(s) | 32, 72, 417, 744, 1116 |
| MvaI | CCWGG | 1 cut(s) | 32 |
| MvnI | CGCG | 1 cut(s) | 1298 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1187, 1196, 1202 |
| NarI | GGCGCC | 1 cut(s) | 420 |
| NciI | CCSGG | 4 cut(s) | 72, 417, 744, 1116 |
| NdeII | GATC | 7 cut(s) | 153, 400, 452, 549, 1099, 1151, 1248 |
| NlaIII | CATG | 1 cut(s) | 1374 |
| NlaIV | GGNNCC | 4 cut(s) | 6, 76, 421, 748 |
| NmeAIII | GCCGAG | 4 cut(s) | 75, 244, 747, 916 |
| NmuCI | GTSAC | 1 cut(s) | 961 |
| NsiI | ATGCAT | 2 cut(s) | 484, 1183 |
| PfeI | GAWTC | 4 cut(s) | 124, 632, 796, 1331 |
| PflFI | GACNNNGTC | 1 cut(s) | 232 |
| PkrI | GCNGC | 7 cut(s) | 101, 499, 580, 773, 1198, 1279, 1297 |
| Ple19I | CGATCG | 3 cut(s) | 156, 552, 1251 |
| PleI | GAGTC | 5 cut(s) | 21, 241, 553, 913, 1252 |
| PluTI | GGCGCC | 1 cut(s) | 423 |
| PpsI | GAGTC | 5 cut(s) | 21, 241, 553, 913, 1252 |
| Psp6I | CCWGG | 1 cut(s) | 30 |
| PspGI | CCWGG | 1 cut(s) | 30 |
| PspN4I | GGNNCC | 4 cut(s) | 6, 76, 421, 748 |
| PspPI | GGNCC | 1 cut(s) | 938 |
| PstI | CTGCAG | 2 cut(s) | 580, 1279 |
| PsyI | GACNNNGTC | 1 cut(s) | 232 |
| PvuI | CGATCG | 3 cut(s) | 156, 552, 1251 |
| RsaI | GTAC | 3 cut(s) | 164, 489, 836 |
| RsaNI | GTAC | 3 cut(s) | 163, 488, 835 |
| RseI | CAYNNNNRTG | 1 cut(s) | 959 |
| SaqAI | TTAA | 2 cut(s) | 198, 870 |
| SatI | GCNGC | 7 cut(s) | 100, 498, 579, 772, 1197, 1278, 1296 |
| Sau3AI | GATC | 7 cut(s) | 153, 400, 452, 549, 1099, 1151, 1248 |
| Sau96I | GGNCC | 1 cut(s) | 938 |
| SchI | GAGTC | 5 cut(s) | 21, 242, 554, 914, 1253 |
| ScrFI | CCNGG | 5 cut(s) | 32, 72, 417, 744, 1116 |
| SduI | GDGCHC | 2 cut(s) | 77, 749 |
| SfaNI | GCATC | 6 cut(s) | 346, 469, 491, 631, 1045, 1190 |
| SfcI | CTRYAG | 2 cut(s) | 576, 1275 |
| SfoI | GGCGCC | 1 cut(s) | 421 |
| SinI | GGWCC | 1 cut(s) | 938 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 959 |
| SmlI | CTYRAG | 2 cut(s) | 386, 1085 |
| SmoI | CTYRAG | 2 cut(s) | 386, 1085 |
| Sse9I | AATT | 8 cut(s) | 316, 345, 611, 950, 1015, 1044, 1105, 1310 |
| SsiI | CCGC | 4 cut(s) | 99, 771, 1205, 1296 |
| SspDI | GGCGCC | 1 cut(s) | 419 |
| SspMI | CTAG | 4 cut(s) | 474, 542, 1173, 1241 |
| StyD4I | CCNGG | 5 cut(s) | 30, 70, 415, 742, 1114 |
| TaaI | ACNGT | 6 cut(s) | 57, 508, 566, 687, 729, 1265 |
| TaqI | TCGA | 4 cut(s) | 36, 548, 708, 1247 |
| TasI | AATT | 8 cut(s) | 316, 345, 611, 950, 1015, 1044, 1105, 1310 |
| TatI | WGTACW | 2 cut(s) | 162, 834 |
| TauI | GCSGC | 3 cut(s) | 102, 774, 1298 |
| TfiI | GAWTC | 4 cut(s) | 124, 632, 796, 1331 |
| Tru1I | TTAA | 2 cut(s) | 198, 870 |
| Tru9I | TTAA | 2 cut(s) | 198, 870 |
| TscAI | CASTG | 3 cut(s) | 358, 984, 1057 |
| TseFI | GTSAC | 1 cut(s) | 961 |
| TseI | GCWGC | 4 cut(s) | 497, 578, 1196, 1277 |
| Tsp45I | GTSAC | 1 cut(s) | 961 |
| TspDTI | ATGAA | 3 cut(s) | 645, 943, 1371 |
| TspGWI | ACGGA | 9 cut(s) | 49, 226, 245, 287, 475, 721, 898, 930, 1174 |
| TspRI | CASTG | 3 cut(s) | 358, 984, 1057 |
| Tth111I | GACNNNGTC | 1 cut(s) | 232 |
| VpaK11BI | GGWCC | 1 cut(s) | 938 |
| XapI | RAATTY | 4 cut(s) | 345, 950, 1044, 1105 |
| XbaI | TCTAGA | 4 cut(s) | 473, 541, 1172, 1240 |
| XspI | CTAG | 4 cut(s) | 474, 542, 1173, 1241 |
| Zsp2I | ATGCAT | 2 cut(s) | 484, 1183 |