Belongs to the chalcone isomerase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G55120 |
| fragaria_vesca | FvH4_7g20870 |
| malus_domestica | MD01G1117800.v1.1 MD01G1118000.v1.1 MD01G1118100.v1.1 MD01G1118300.v1.1 MD07G1186300.v1.1 MD07G1186400.v1.1 |
| prunus_persica | Prupe.2G225200_v2.0.a1 |
| pyrus_communis | pycom01g14550 pycom07g17740 pycom07g17750 pycom07g17760 pycom07g17770 |
| rosa_chinensis | RchiOBHm_Chr1g0365111 RchiOBHm_Chr7g0221421 RchiOBHm_Chr7g0221431 |
| rosa_laevigata | RLG00000027441 |
| rosa_multiflora | Rmu_co8490591.1_g000001 Rmu_sc0001688.1_g000009 Rmu_sc0024062.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00291420 Rroxscaffold_4G00291930 |
| rosa_rugosa | Rorug01G0319900 |
| rosa_samantha | Rh1AG328600 Rh1BG290200 Rh1CG306900 Rh1DG321800 Rh7AG342300 Rh7CG359900 |
| rosa_wichuraiana | Rw1G029160 Rw7G029060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 446, 1145 |
| AccII | CGCG | 3 cut(s) | 47, 1232, 1325 |
| AciI | CCGC | 7 cut(s) | 45, 99, 440, 533, 798, 1232, 1323 |
| AclWI | GGATC | 4 cut(s) | 487, 768, 781, 1186 |
| AcoI | YGGCCR | 3 cut(s) | 216, 621, 1320 |
| AcsI | RAATTY | 5 cut(s) | 278, 372, 433, 977, 1071 |
| AcuI | CTGAAG | 6 cut(s) | 232, 540, 713, 931, 1239, 1392 |
| AcyI | GRCGYC | 2 cut(s) | 447, 1146 |
| AfaI | GTAC | 3 cut(s) | 516, 863, 1215 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 201, 311, 900, 1010 |
| AgsI | TTSAA | 8 cut(s) | 287, 404, 424, 646, 986, 1103, 1123, 1345 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 74, 106, 773, 805 |
| AluBI | AGCT | 6 cut(s) | 190, 495, 524, 889, 1194, 1223 |
| AluI | AGCT | 6 cut(s) | 190, 495, 524, 889, 1194, 1223 |
| Alw26I | GTCTC | 1 cut(s) | 32 |
| AlwI | GGATC | 4 cut(s) | 487, 768, 781, 1186 |
| AoxI | GGCC | 5 cut(s) | 216, 313, 621, 1012, 1320 |
| ApeKI | GCWGC | 4 cut(s) | 524, 605, 1223, 1304 |
| ApoI | RAATTY | 5 cut(s) | 278, 372, 433, 977, 1071 |
| AspLEI | GCGC | 4 cut(s) | 104, 449, 878, 1148 |
| AspS9I | GGNCC | 4 cut(s) | 57, 266, 313, 965 |
| AsuC2I | CCSGG | 4 cut(s) | 72, 444, 771, 1143 |
| AsuHPI | GGTGA | 4 cut(s) | 121, 547, 820, 1246 |
| AvaII | GGWCC | 3 cut(s) | 57, 266, 965 |
| BamHI | GGATCC | 1 cut(s) | 773 |
| BanI | GGYRCC | 2 cut(s) | 446, 1145 |
| BanII | GRGCYC | 1 cut(s) | 77 |
| BbsI | GAAGAC | 2 cut(s) | 412, 1111 |
| BbvCI | CCTCAGC | 2 cut(s) | 186, 885 |
| BbvI | GCAGC | 4 cut(s) | 511, 617, 1210, 1316 |
| BccI | CCATC | 1 cut(s) | 662 |
| BceAI | ACGGC | 5 cut(s) | 164, 165, 179, 231, 608 |
| BcnI | CCSGG | 4 cut(s) | 72, 444, 771, 1143 |
| BcoDI | GTCTC | 1 cut(s) | 32 |
| BfaI | CTAG | 4 cut(s) | 501, 569, 1200, 1268 |
| BfmI | CTRYAG | 2 cut(s) | 603, 1302 |
| BfoI | RGCGCY | 3 cut(s) | 450, 879, 1149 |
| BisI | GCNGC | 6 cut(s) | 100, 525, 606, 1224, 1305, 1323 |
| BlsI | GCNGC | 6 cut(s) | 101, 526, 607, 1225, 1306, 1324 |
| Bme1390I | CCNGG | 4 cut(s) | 72, 444, 771, 1143 |
| Bme18I | GGWCC | 3 cut(s) | 57, 266, 965 |
| BmgT120I | GGNCC | 4 cut(s) | 57, 266, 313, 965 |
| BmiI | GGNNCC | 6 cut(s) | 6, 76, 448, 705, 775, 1147 |
| BmrFI | CCNGG | 4 cut(s) | 72, 444, 771, 1143 |
| BmsI | GCATC | 6 cut(s) | 373, 496, 518, 1072, 1195, 1217 |
| BpiI | GAAGAC | 2 cut(s) | 412, 1111 |
| BpmI | CTGGAG | 3 cut(s) | 14, 140, 839 |
| Bpu10I | CCTNAGC | 2 cut(s) | 186, 885 |
| BpuEI | CTTGAG | 2 cut(s) | 434, 1133 |
| BpuMI | CCSGG | 4 cut(s) | 72, 444, 771, 1143 |
| BsaHI | GRCGYC | 2 cut(s) | 447, 1146 |
| BsaJI | CCNNGG | 7 cut(s) | 53, 94, 219, 558, 793, 918, 1257 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1153, 1183 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 201, 311, 900, 1010 |
| Bse118I | RCCGGY | 1 cut(s) | 1014 |
| BseDI | CCNNGG | 7 cut(s) | 53, 94, 219, 558, 793, 918, 1257 |
| BseGI | GGATG | 2 cut(s) | 509, 1208 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 201, 311, 900, 1010 |
| BseMII | CTCAG | 4 cut(s) | 200, 318, 899, 1017 |
| BseRI | GAGGAG | 2 cut(s) | 67, 236 |
| BseX3I | CGGCCG | 1 cut(s) | 216 |
| BseXI | GCAGC | 4 cut(s) | 511, 617, 1210, 1316 |
| Bsh1236I | CGCG | 3 cut(s) | 47, 1232, 1325 |
| Bsh1285I | CGRYCG | 6 cut(s) | 45, 156, 219, 579, 855, 1278 |
| BshFI | GGCC | 5 cut(s) | 218, 315, 623, 1014, 1322 |
| BshNI | GGYRCC | 2 cut(s) | 446, 1145 |
| BsiEI | CGRYCG | 6 cut(s) | 45, 156, 219, 579, 855, 1278 |
| BsiSI | CCGG | 9 cut(s) | 24, 71, 444, 678, 723, 770, 1015, 1143, 1377 |
| BslFI | GGGAC | 2 cut(s) | 266, 965 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 201, 311, 900, 1010 |
| BsmAI | GTCTC | 1 cut(s) | 32 |
| BsmBI | CGTCTC | 1 cut(s) | 32 |
| BsmFI | GGGAC | 2 cut(s) | 266, 965 |
| BsnI | GGCC | 5 cut(s) | 218, 315, 623, 1014, 1322 |
| Bsp1286I | GDGCHC | 1 cut(s) | 77 |
| BspACI | CCGC | 7 cut(s) | 45, 99, 440, 533, 798, 1232, 1323 |
| BspANI | GGCC | 5 cut(s) | 218, 315, 623, 1014, 1322 |
| BspCNI | CTCAG | 4 cut(s) | 199, 319, 898, 1018 |
| BspFNI | CGCG | 3 cut(s) | 47, 1232, 1325 |
| BspLI | GGNNCC | 6 cut(s) | 6, 76, 448, 705, 775, 1147 |
| BspMAI | CTGCAG | 2 cut(s) | 607, 1306 |
| BspPI | GGATC | 4 cut(s) | 487, 768, 781, 1186 |
| BspT107I | GGYRCC | 2 cut(s) | 446, 1145 |
| BsrFI | RCCGGY | 1 cut(s) | 1014 |
| BssAI | RCCGGY | 1 cut(s) | 1014 |
| BssECI | CCNNGG | 7 cut(s) | 53, 94, 219, 558, 793, 918, 1257 |
| BssNI | GRCGYC | 2 cut(s) | 447, 1146 |
| BssT1I | CCWWGG | 1 cut(s) | 918 |
| Bst4CI | ACNGT | 4 cut(s) | 57, 714, 756, 1292 |
| BstACI | GRCGYC | 2 cut(s) | 447, 1146 |
| BstC8I | GCNNGC | 6 cut(s) | 21, 192, 317, 720, 891, 1016 |
| BstDEI | CTNAG | 4 cut(s) | 186, 327, 885, 1026 |
| BstDSI | CCRYGG | 1 cut(s) | 53 |
| BstF5I | GGATG | 2 cut(s) | 509, 1208 |
| BstFNI | CGCG | 3 cut(s) | 47, 1232, 1325 |
| BstH2I | RGCGCY | 3 cut(s) | 450, 879, 1149 |
| BstHHI | GCGC | 4 cut(s) | 104, 449, 878, 1148 |
| BstMAI | GTCTC | 1 cut(s) | 32 |
| BstMCI | CGRYCG | 6 cut(s) | 45, 156, 219, 579, 855, 1278 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 530, 1229 |
| BstSCI | CCNGG | 4 cut(s) | 70, 442, 769, 1141 |
| BstSFI | CTRYAG | 2 cut(s) | 603, 1302 |
| BstUI | CGCG | 3 cut(s) | 47, 1232, 1325 |
| BstV1I | GCAGC | 4 cut(s) | 511, 617, 1210, 1316 |
| BstV2I | GAAGAC | 2 cut(s) | 412, 1111 |
| BstX2I | RGATCY | 1 cut(s) | 773 |
| BstYI | RGATCY | 1 cut(s) | 773 |
| BstZI | CGGCCG | 1 cut(s) | 216 |
| BsuRI | GGCC | 5 cut(s) | 218, 315, 623, 1014, 1322 |
| BtgI | CCRYGG | 1 cut(s) | 53 |
| BtsCI | GGATG | 2 cut(s) | 509, 1208 |
| BtsIMutI | CAGTG | 5 cut(s) | 305, 378, 482, 1004, 1077 |
| Cac8I | GCNNGC | 6 cut(s) | 21, 192, 317, 720, 891, 1016 |
| CfoI | GCGC | 4 cut(s) | 104, 449, 878, 1148 |
| Cfr10I | RCCGGY | 1 cut(s) | 1014 |
| Cfr13I | GGNCC | 4 cut(s) | 57, 266, 313, 965 |
| CpoI | CGGWCCG | 1 cut(s) | 57 |
| Csp6I | GTAC | 3 cut(s) | 515, 862, 1214 |
| CspI | CGGWCCG | 1 cut(s) | 57 |
| CviAII | CATG | 3 cut(s) | 590, 880, 1398 |
| CviQI | GTAC | 3 cut(s) | 515, 862, 1214 |
| DdeI | CTNAG | 4 cut(s) | 186, 327, 885, 1026 |
| DinI | GGCGCC | 2 cut(s) | 448, 1147 |
| EaeI | YGGCCR | 3 cut(s) | 216, 621, 1320 |
| EagI | CGGCCG | 1 cut(s) | 216 |
| EclXI | CGGCCG | 1 cut(s) | 216 |
| Eco130I | CCWWGG | 1 cut(s) | 918 |
| Eco24I | GRGCYC | 1 cut(s) | 77 |
| Eco47I | GGWCC | 3 cut(s) | 57, 266, 965 |
| Eco52I | CGGCCG | 1 cut(s) | 216 |
| Eco57I | CTGAAG | 6 cut(s) | 232, 540, 713, 931, 1239, 1392 |
| EcoT14I | CCWWGG | 1 cut(s) | 918 |
| EcoT22I | ATGCAT | 2 cut(s) | 511, 1210 |
| EcoT38I | GRGCYC | 1 cut(s) | 77 |
| EgeI | GGCGCC | 2 cut(s) | 448, 1147 |
| EheI | GGCGCC | 2 cut(s) | 448, 1147 |
| ErhI | CCWWGG | 1 cut(s) | 918 |
| Esp3I | CGTCTC | 1 cut(s) | 32 |
| FaeI | CATG | 3 cut(s) | 593, 883, 1401 |
| FaiI | YATR | 4 cut(s) | 324, 591, 881, 1399 |
| FaqI | GGGAC | 2 cut(s) | 266, 965 |
| FatI | CATG | 3 cut(s) | 589, 879, 1397 |
| FauI | CCCGC | 1 cut(s) | 447 |
| Fnu4HI | GCNGC | 6 cut(s) | 100, 525, 606, 1224, 1305, 1323 |
| FokI | GGATG | 2 cut(s) | 496, 1195 |
| FriOI | GRGCYC | 1 cut(s) | 77 |
| Fsp4HI | GCNGC | 6 cut(s) | 100, 525, 606, 1224, 1305, 1323 |
| FspBI | CTAG | 4 cut(s) | 501, 569, 1200, 1268 |
| GlaI | GCGC | 4 cut(s) | 103, 448, 877, 1147 |
| GluI | GCNGC | 6 cut(s) | 100, 525, 606, 1224, 1305, 1323 |
| GsuI | CTGGAG | 3 cut(s) | 14, 140, 839 |
| HaeII | RGCGCY | 3 cut(s) | 450, 879, 1149 |
| HaeIII | GGCC | 5 cut(s) | 218, 315, 623, 1014, 1322 |
| HapII | CCGG | 9 cut(s) | 24, 71, 444, 678, 723, 770, 1015, 1143, 1377 |
| HhaI | GCGC | 4 cut(s) | 104, 449, 878, 1148 |
| Hin1I | GRCGYC | 2 cut(s) | 447, 1146 |
| Hin1II | CATG | 3 cut(s) | 593, 883, 1401 |
| Hin6I | GCGC | 4 cut(s) | 102, 447, 876, 1146 |
| HinP1I | GCGC | 4 cut(s) | 102, 447, 876, 1146 |
| HincII | GTYRAC | 2 cut(s) | 228, 927 |
| HindII | GTYRAC | 2 cut(s) | 228, 927 |
| HinfI | GANTC | 9 cut(s) | 27, 124, 233, 572, 659, 823, 932, 1271, 1358 |
| HpaII | CCGG | 9 cut(s) | 24, 71, 444, 678, 723, 770, 1015, 1143, 1377 |
| HphI | GGTGA | 4 cut(s) | 121, 547, 820, 1246 |
| Hpy166II | GTNNAC | 5 cut(s) | 147, 228, 846, 862, 927 |
| Hpy188III | TCNNGA | 7 cut(s) | 31, 37, 139, 501, 569, 1200, 1268 |
| Hpy8I | GTNNAC | 5 cut(s) | 147, 228, 846, 862, 927 |
| Hpy99I | CGWCG | 1 cut(s) | 718 |
| HpyAV | CCTTC | 3 cut(s) | 199, 898, 1082 |
| HpyCH4III | ACNGT | 4 cut(s) | 57, 714, 756, 1292 |
| HpyCH4IV | ACGT | 1 cut(s) | 746 |
| HpyCH4V | TGCA | 9 cut(s) | 386, 509, 527, 605, 1085, 1208, 1226, 1304, 1353 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 530, 1229 |
| HpyF3I | CTNAG | 4 cut(s) | 186, 327, 885, 1026 |
| HpySE526I | ACGT | 1 cut(s) | 746 |
| Hsp92I | GRCGYC | 2 cut(s) | 447, 1146 |
| Hsp92II | CATG | 3 cut(s) | 593, 883, 1401 |
| HspAI | GCGC | 4 cut(s) | 102, 447, 876, 1146 |
| KasI | GGCGCC | 2 cut(s) | 446, 1145 |
| KroI | GCCGGC | 1 cut(s) | 1014 |
| KroNI | GCCGGC | 1 cut(s) | 1016 |
| LmnI | GCTCC | 3 cut(s) | 10, 80, 709 |
| Lsp1109I | GCAGC | 4 cut(s) | 511, 617, 1210, 1316 |
| LweI | GCATC | 6 cut(s) | 373, 496, 518, 1072, 1195, 1217 |
| MaeI | CTAG | 4 cut(s) | 501, 569, 1200, 1268 |
| MaeII | ACGT | 1 cut(s) | 746 |
| MaeIII | GTNAC | 4 cut(s) | 259, 289, 958, 988 |
| MboII | GAAGA | 5 cut(s) | 238, 401, 412, 937, 1111 |
| MflI | RGATCY | 1 cut(s) | 773 |
| MhlI | GDGCHC | 1 cut(s) | 77 |
| MluCI | AATT | 9 cut(s) | 278, 343, 372, 433, 638, 977, 1042, 1071, 1337 |
| Mly113I | GGCGCC | 2 cut(s) | 447, 1146 |
| MlyI | GAGTC | 5 cut(s) | 21, 242, 581, 941, 1280 |
| MmeI | TCCRAC | 6 cut(s) | 32, 105, 562, 804, 1048, 1261 |
| Mph1103I | ATGCAT | 2 cut(s) | 511, 1210 |
| MroNI | GCCGGC | 1 cut(s) | 1014 |
| MseI | TTAA | 2 cut(s) | 198, 897 |
| MslI | CAYNNNNRTG | 2 cut(s) | 287, 986 |
| MspI | CCGG | 9 cut(s) | 24, 71, 444, 678, 723, 770, 1015, 1143, 1377 |
| MspR9I | CCNGG | 4 cut(s) | 72, 444, 771, 1143 |
| MvnI | CGCG | 3 cut(s) | 47, 1232, 1325 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 530, 1229 |
| NaeI | GCCGGC | 1 cut(s) | 1016 |
| NarI | GGCGCC | 2 cut(s) | 447, 1146 |
| NciI | CCSGG | 4 cut(s) | 72, 444, 771, 1143 |
| NgoMIV | GCCGGC | 1 cut(s) | 1014 |
| NlaIII | CATG | 3 cut(s) | 593, 883, 1401 |
| NlaIV | GGNNCC | 6 cut(s) | 6, 76, 448, 705, 775, 1147 |
| NmeAIII | GCCGAG | 3 cut(s) | 75, 244, 774 |
| NmuCI | GTSAC | 2 cut(s) | 289, 988 |
| NsiI | ATGCAT | 2 cut(s) | 511, 1210 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 752 |
| PdiI | GCCGGC | 1 cut(s) | 1016 |
| PfeI | GAWTC | 4 cut(s) | 124, 659, 823, 1358 |
| PflFI | GACNNNGTC | 2 cut(s) | 232, 931 |
| PfoI | TCCNGGA | 1 cut(s) | 769 |
| PkrI | GCNGC | 6 cut(s) | 101, 526, 607, 1225, 1306, 1324 |
| Ple19I | CGATCG | 4 cut(s) | 156, 579, 855, 1278 |
| PleI | GAGTC | 5 cut(s) | 21, 241, 580, 940, 1279 |
| PluTI | GGCGCC | 2 cut(s) | 450, 1149 |
| PpsI | GAGTC | 5 cut(s) | 21, 241, 580, 940, 1279 |
| PspN4I | GGNNCC | 6 cut(s) | 6, 76, 448, 705, 775, 1147 |
| PspPI | GGNCC | 4 cut(s) | 57, 266, 313, 965 |
| PstI | CTGCAG | 2 cut(s) | 607, 1306 |
| PsuI | RGATCY | 1 cut(s) | 773 |
| PsyI | GACNNNGTC | 2 cut(s) | 232, 931 |
| PvuI | CGATCG | 4 cut(s) | 156, 579, 855, 1278 |
| RsaI | GTAC | 3 cut(s) | 516, 863, 1215 |
| RsaNI | GTAC | 3 cut(s) | 515, 862, 1214 |
| RseI | CAYNNNNRTG | 2 cut(s) | 287, 986 |
| Rsr2I | CGGWCCG | 1 cut(s) | 57 |
| RsrII | CGGWCCG | 1 cut(s) | 57 |
| SaqAI | TTAA | 2 cut(s) | 198, 897 |
| SatI | GCNGC | 6 cut(s) | 100, 525, 606, 1224, 1305, 1323 |
| Sau96I | GGNCC | 4 cut(s) | 57, 266, 313, 965 |
| SchI | GAGTC | 5 cut(s) | 21, 242, 581, 941, 1280 |
| ScrFI | CCNGG | 4 cut(s) | 72, 444, 771, 1143 |
| SduI | GDGCHC | 1 cut(s) | 77 |
| SfaNI | GCATC | 6 cut(s) | 373, 496, 518, 1072, 1195, 1217 |
| SfcI | CTRYAG | 2 cut(s) | 603, 1302 |
| SfoI | GGCGCC | 2 cut(s) | 448, 1147 |
| SinI | GGWCC | 3 cut(s) | 57, 266, 965 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 287, 986 |
| SmlI | CTYRAG | 2 cut(s) | 413, 1112 |
| SmoI | CTYRAG | 2 cut(s) | 413, 1112 |
| Sse9I | AATT | 9 cut(s) | 278, 343, 372, 433, 638, 977, 1042, 1071, 1337 |
| SsiI | CCGC | 7 cut(s) | 45, 99, 440, 533, 798, 1232, 1323 |
| SspDI | GGCGCC | 2 cut(s) | 446, 1145 |
| SspMI | CTAG | 4 cut(s) | 501, 569, 1200, 1268 |
| StyD4I | CCNGG | 4 cut(s) | 70, 442, 769, 1141 |
| StyI | CCWWGG | 1 cut(s) | 918 |
| TaaI | ACNGT | 4 cut(s) | 57, 714, 756, 1292 |
| TaiI | ACGT | 1 cut(s) | 749 |
| TaqI | TCGA | 4 cut(s) | 36, 575, 735, 1274 |
| TasI | AATT | 9 cut(s) | 278, 343, 372, 433, 638, 977, 1042, 1071, 1337 |
| TatI | WGTACW | 1 cut(s) | 861 |
| TauI | GCSGC | 2 cut(s) | 102, 1325 |
| TfiI | GAWTC | 4 cut(s) | 124, 659, 823, 1358 |
| Tru1I | TTAA | 2 cut(s) | 198, 897 |
| Tru9I | TTAA | 2 cut(s) | 198, 897 |
| TscAI | CASTG | 5 cut(s) | 312, 385, 489, 1011, 1084 |
| TseFI | GTSAC | 2 cut(s) | 289, 988 |
| TseI | GCWGC | 4 cut(s) | 524, 605, 1223, 1304 |
| Tsp45I | GTSAC | 2 cut(s) | 289, 988 |
| TspDTI | ATGAA | 4 cut(s) | 271, 672, 970, 1398 |
| TspGWI | ACGGA | 7 cut(s) | 49, 226, 245, 502, 748, 944, 1201 |
| TspRI | CASTG | 5 cut(s) | 312, 385, 489, 1011, 1084 |
| Tth111I | GACNNNGTC | 2 cut(s) | 232, 931 |
| VpaK11BI | GGWCC | 3 cut(s) | 57, 266, 965 |
| XapI | RAATTY | 5 cut(s) | 278, 372, 433, 977, 1071 |
| XbaI | TCTAGA | 4 cut(s) | 500, 568, 1199, 1267 |
| XspI | CTAG | 4 cut(s) | 501, 569, 1200, 1268 |
| Zsp2I | ATGCAT | 2 cut(s) | 511, 1210 |