ESKIMO 1-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G40150 AT2G40160 AT2G40160 AT2G40160 AT3G55990 |
| fragaria_vesca | FvH4_7g24620 |
| malus_domestica | MD01G1154500.v1.1 MD07G1223300.v1.1 |
| prunus_persica | Prupe.2G251900_v2.0.a1 |
| pyrus_communis | pycom01g17170 pycom07g20190 pycom07g20200 |
| rosa_chinensis | RchiOBHm_Chr1g0367551 RchiOBHm_Chr1g0370451 |
| rosa_laevigata | RLG00000004529 RLG00000004557 RLG00000008944 RLG00000027040 RLG00000036183 |
| rosa_multiflora | Rmu_sc0005656.1_g000014 |
| rosa_roxburghii | Rroxscaffold_4G00286550 |
| rosa_rugosa | Rorug01G0356900 |
| rosa_samantha | Rh1BG328300 Rh1CG341400 Rh2CG472100 Rh2CG472200 Rh2DG621700 Rh7DG249300 Rh7DG249400 Rh7DG445600 |
| rosa_wichuraiana | Rw1G010640 Rw1G032200 Rw6G015350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 858, 1124 |
| AccB1I | GGYRCC | 2 cut(s) | 883, 1494 |
| AccBSI | CCGCTC | 1 cut(s) | 1554 |
| AccI | GTMKAC | 1 cut(s) | 993 |
| AciI | CCGC | 5 cut(s) | 44, 503, 1306, 1393, 1552 |
| AclWI | GGATC | 4 cut(s) | 539, 908, 1066, 1154 |
| AcoI | YGGCCR | 2 cut(s) | 1100, 1467 |
| AcsI | RAATTY | 1 cut(s) | 904 |
| AcuI | CTGAAG | 1 cut(s) | 1168 |
| AcyI | GRCGYC | 3 cut(s) | 884, 990, 1445 |
| AfaI | GTAC | 6 cut(s) | 57, 125, 638, 1085, 1112, 1535 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 112, 403, 1105, 1518 |
| AflIII | ACRYGT | 1 cut(s) | 1538 |
| AgsI | TTSAA | 8 cut(s) | 227, 452, 497, 526, 937, 1009, 1273, 1326 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 139, 1102 |
| AjiI | CACGTC | 2 cut(s) | 136, 1131 |
| AluBI | AGCT | 5 cut(s) | 7, 184, 282, 813, 1215 |
| AluI | AGCT | 5 cut(s) | 7, 184, 282, 813, 1215 |
| Alw21I | GWGCWC | 2 cut(s) | 284, 1419 |
| Alw26I | GTCTC | 3 cut(s) | 97, 279, 1200 |
| Alw44I | GTGCAC | 1 cut(s) | 1415 |
| AlwI | GGATC | 4 cut(s) | 539, 908, 1066, 1154 |
| Ama87I | CYCGRG | 3 cut(s) | 163, 283, 1502 |
| AoxI | GGCC | 2 cut(s) | 1100, 1467 |
| ApaLI | GTGCAC | 1 cut(s) | 1415 |
| ApeKI | GCWGC | 4 cut(s) | 4, 655, 1188, 1453 |
| ApoI | RAATTY | 1 cut(s) | 904 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1526 |
| AspLEI | GCGC | 1 cut(s) | 886 |
| AspS9I | GGNCC | 3 cut(s) | 1096, 1170, 1303 |
| AsuC2I | CCSGG | 5 cut(s) | 221, 801, 1466, 1503, 1504 |
| AsuHPI | GGTGA | 3 cut(s) | 562, 829, 986 |
| AvaI | CYCGRG | 3 cut(s) | 163, 283, 1502 |
| AvaII | GGWCC | 3 cut(s) | 1096, 1170, 1303 |
| BaeGI | GKGCMC | 2 cut(s) | 1301, 1419 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1525, 1558 |
| BanI | GGYRCC | 2 cut(s) | 883, 1494 |
| BanII | GRGCYC | 1 cut(s) | 284 |
| BbsI | GAAGAC | 2 cut(s) | 94, 1171 |
| Bbv12I | GWGCWC | 2 cut(s) | 284, 1419 |
| BbvI | GCAGC | 4 cut(s) | 16, 667, 1200, 1465 |
| BccI | CCATC | 7 cut(s) | 86, 152, 428, 645, 1087, 1229, 1430 |
| BceAI | ACGGC | 1 cut(s) | 1087 |
| BcgI | CGANNNNNNTGC | 3 cut(s) | 27, 679, 713 |
| BcnI | CCSGG | 5 cut(s) | 221, 801, 1466, 1503, 1504 |
| BcoDI | GTCTC | 3 cut(s) | 97, 279, 1200 |
| BfmI | CTRYAG | 1 cut(s) | 185 |
| BfoI | RGCGCY | 1 cut(s) | 887 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1466 |
| BisI | GCNGC | 6 cut(s) | 5, 45, 503, 656, 1189, 1454 |
| BlsI | GCNGC | 6 cut(s) | 6, 46, 504, 657, 1190, 1455 |
| Bme1390I | CCNGG | 5 cut(s) | 221, 801, 1466, 1503, 1504 |
| Bme18I | GGWCC | 3 cut(s) | 1096, 1170, 1303 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 139, 1102 |
| BmeT110I | CYCGRG | 3 cut(s) | 163, 283, 1502 |
| BmgBI | CACGTC | 2 cut(s) | 136, 1131 |
| BmgT120I | GGNCC | 3 cut(s) | 1096, 1170, 1303 |
| BmiI | GGNNCC | 3 cut(s) | 829, 885, 1496 |
| BmrFI | CCNGG | 5 cut(s) | 221, 801, 1466, 1503, 1504 |
| BmrI | ACTGGG | 1 cut(s) | 331 |
| BmsI | GCATC | 2 cut(s) | 1390, 1494 |
| BmuI | ACTGGG | 1 cut(s) | 331 |
| BoxI | GACNNNNGTC | 2 cut(s) | 202, 1175 |
| BpiI | GAAGAC | 2 cut(s) | 94, 1171 |
| BpmI | CTGGAG | 2 cut(s) | 722, 1269 |
| Bpu10I | CCTNAGC | 1 cut(s) | 468 |
| BpuEI | CTTGAG | 1 cut(s) | 162 |
| BpuMI | CCSGG | 5 cut(s) | 221, 801, 1466, 1503, 1504 |
| BsaAI | YACGTR | 1 cut(s) | 1541 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1164 |
| BsaHI | GRCGYC | 3 cut(s) | 884, 990, 1445 |
| BsaJI | CCNNGG | 2 cut(s) | 1501, 1502 |
| BsaWI | WCCGGW | 2 cut(s) | 547, 1113 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 59, 89, 522, 552, 1267, 1297 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 112, 403, 1105, 1518 |
| Bse118I | RCCGGY | 2 cut(s) | 403, 1098 |
| Bse1I | ACTGG | 4 cut(s) | 337, 367, 757, 1286 |
| Bse3DI | GCAATG | 1 cut(s) | 54 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1164 |
| BseDI | CCNNGG | 2 cut(s) | 1501, 1502 |
| BseGI | GGATG | 4 cut(s) | 394, 556, 1032, 1485 |
| BseJI | GATNNNNATC | 1 cut(s) | 1164 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 112, 403, 1105, 1518 |
| BseMI | GCAATG | 1 cut(s) | 54 |
| BseMII | CTCAG | 5 cut(s) | 269, 318, 482, 797, 1425 |
| BseNI | ACTGG | 4 cut(s) | 337, 367, 757, 1286 |
| BseRI | GAGGAG | 2 cut(s) | 500, 503 |
| BseSI | GKGCMC | 2 cut(s) | 1301, 1419 |
| BseX3I | CGGCCG | 1 cut(s) | 1100 |
| BseXI | GCAGC | 4 cut(s) | 16, 667, 1200, 1465 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1103 |
| BshFI | GGCC | 2 cut(s) | 1102, 1469 |
| BshNI | GGYRCC | 2 cut(s) | 883, 1494 |
| BsiEI | CGRYCG | 1 cut(s) | 1103 |
| BsiHKAI | GWGCWC | 2 cut(s) | 284, 1419 |
| BsiHKCI | CYCGRG | 3 cut(s) | 163, 283, 1502 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 112, 403, 1105, 1518 |
| BsmAI | GTCTC | 3 cut(s) | 97, 279, 1200 |
| BsnI | GGCC | 2 cut(s) | 1102, 1469 |
| BsoBI | CYCGRG | 3 cut(s) | 163, 283, 1502 |
| Bsp1286I | GDGCHC | 3 cut(s) | 284, 1301, 1419 |
| Bsp1407I | TGTACA | 2 cut(s) | 123, 1533 |
| Bsp143I | GATC | 7 cut(s) | 409, 439, 544, 913, 1058, 1066, 1159 |
| BspACI | CCGC | 5 cut(s) | 44, 503, 1306, 1393, 1552 |
| BspANI | GGCC | 2 cut(s) | 1102, 1469 |
| BspCNI | CTCAG | 5 cut(s) | 270, 319, 481, 796, 1424 |
| BspHI | TCATGA | 1 cut(s) | 253 |
| BspLI | GGNNCC | 3 cut(s) | 829, 885, 1496 |
| BspPI | GGATC | 4 cut(s) | 539, 908, 1066, 1154 |
| BspQI | GCTCTTC | 1 cut(s) | 803 |
| BspT107I | GGYRCC | 2 cut(s) | 883, 1494 |
| BsrBI | CCGCTC | 1 cut(s) | 1554 |
| BsrDI | GCAATG | 1 cut(s) | 54 |
| BsrFI | RCCGGY | 2 cut(s) | 403, 1098 |
| BsrGI | TGTACA | 2 cut(s) | 123, 1533 |
| BsrI | ACTGG | 4 cut(s) | 337, 367, 757, 1286 |
| BssAI | RCCGGY | 2 cut(s) | 403, 1098 |
| BssECI | CCNNGG | 2 cut(s) | 1501, 1502 |
| BssMI | GATC | 7 cut(s) | 409, 439, 544, 913, 1058, 1066, 1159 |
| BssNI | GRCGYC | 3 cut(s) | 884, 990, 1445 |
| Bst4CI | ACNGT | 3 cut(s) | 201, 868, 1177 |
| Bst6I | CTCTTC | 5 cut(s) | 100, 113, 471, 477, 803 |
| BstACI | GRCGYC | 3 cut(s) | 884, 990, 1445 |
| BstAUI | TGTACA | 2 cut(s) | 123, 1533 |
| BstBAI | YACGTR | 1 cut(s) | 1541 |
| BstC8I | GCNNGC | 2 cut(s) | 1310, 1458 |
| BstDEI | CTNAG | 6 cut(s) | 278, 327, 468, 783, 1137, 1411 |
| BstF5I | GGATG | 4 cut(s) | 394, 556, 1032, 1485 |
| BstH2I | RGCGCY | 1 cut(s) | 887 |
| BstHHI | GCGC | 1 cut(s) | 886 |
| BstKTI | GATC | 7 cut(s) | 412, 442, 547, 916, 1061, 1069, 1162 |
| BstMAI | GTCTC | 3 cut(s) | 97, 279, 1200 |
| BstMBI | GATC | 7 cut(s) | 409, 439, 544, 913, 1058, 1066, 1159 |
| BstMCI | CGRYCG | 1 cut(s) | 1103 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 810, 1305, 1453, 1466, 1475 |
| BstNSI | RCATGY | 3 cut(s) | 925, 1195, 1295 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 202, 1175 |
| BstSCI | CCNGG | 5 cut(s) | 219, 799, 1464, 1501, 1502 |
| BstSFI | CTRYAG | 1 cut(s) | 185 |
| BstSLI | GKGCMC | 2 cut(s) | 1301, 1419 |
| BstV1I | GCAGC | 4 cut(s) | 16, 667, 1200, 1465 |
| BstV2I | GAAGAC | 2 cut(s) | 94, 1171 |
| BstZI | CGGCCG | 1 cut(s) | 1100 |
| BsuRI | GGCC | 2 cut(s) | 1102, 1469 |
| BtgZI | GCGATG | 1 cut(s) | 130 |
| BtrI | CACGTC | 2 cut(s) | 136, 1131 |
| BtsCI | GGATG | 4 cut(s) | 394, 556, 1032, 1485 |
| BtsIMutI | CAGTG | 4 cut(s) | 743, 764, 1293, 1419 |
| Cac8I | GCNNGC | 2 cut(s) | 1310, 1458 |
| CciI | TCATGA | 1 cut(s) | 253 |
| CfoI | GCGC | 1 cut(s) | 886 |
| Cfr10I | RCCGGY | 2 cut(s) | 403, 1098 |
| Cfr13I | GGNCC | 3 cut(s) | 1096, 1170, 1303 |
| Cfr9I | CCCGGG | 1 cut(s) | 1502 |
| CpoI | CGGWCCG | 1 cut(s) | 1303 |
| CseI | GACGC | 2 cut(s) | 979, 1453 |
| Csp6I | GTAC | 6 cut(s) | 56, 124, 637, 1084, 1111, 1534 |
| CspI | CGGWCCG | 1 cut(s) | 1303 |
| CviAII | CATG | 9 cut(s) | 121, 254, 610, 769, 922, 971, 1192, 1292, 1518 |
| CviQI | GTAC | 6 cut(s) | 56, 124, 637, 1084, 1111, 1534 |
| DdeI | CTNAG | 6 cut(s) | 278, 327, 468, 783, 1137, 1411 |
| DinI | GGCGCC | 1 cut(s) | 885 |
| DpnI | GATC | 7 cut(s) | 411, 441, 546, 915, 1060, 1068, 1161 |
| DpnII | GATC | 7 cut(s) | 409, 439, 544, 913, 1058, 1066, 1159 |
| DriI | GACNNNNNGTC | 2 cut(s) | 139, 1102 |
| EaeI | YGGCCR | 2 cut(s) | 1100, 1467 |
| EagI | CGGCCG | 1 cut(s) | 1100 |
| Eam1104I | CTCTTC | 5 cut(s) | 100, 113, 471, 477, 803 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 139, 1102 |
| EarI | CTCTTC | 5 cut(s) | 100, 113, 471, 477, 803 |
| Ecl136II | GAGCTC | 1 cut(s) | 282 |
| EclXI | CGGCCG | 1 cut(s) | 1100 |
| Eco24I | GRGCYC | 1 cut(s) | 284 |
| Eco47I | GGWCC | 3 cut(s) | 1096, 1170, 1303 |
| Eco52I | CGGCCG | 1 cut(s) | 1100 |
| Eco53kI | GAGCTC | 1 cut(s) | 282 |
| Eco57I | CTGAAG | 1 cut(s) | 1168 |
| Eco88I | CYCGRG | 3 cut(s) | 163, 283, 1502 |
| EcoICRI | GAGCTC | 1 cut(s) | 282 |
| EcoT38I | GRGCYC | 1 cut(s) | 284 |
| EgeI | GGCGCC | 1 cut(s) | 885 |
| EheI | GGCGCC | 1 cut(s) | 885 |
| FaeI | CATG | 9 cut(s) | 124, 257, 613, 772, 925, 974, 1195, 1295, 1521 |
| FatI | CATG | 9 cut(s) | 120, 253, 609, 768, 921, 970, 1191, 1291, 1517 |
| FblI | GTMKAC | 1 cut(s) | 993 |
| Fnu4HI | GCNGC | 6 cut(s) | 5, 45, 503, 656, 1189, 1454 |
| FokI | GGATG | 4 cut(s) | 401, 543, 1039, 1472 |
| FriOI | GRGCYC | 1 cut(s) | 284 |
| Fsp4HI | GCNGC | 6 cut(s) | 5, 45, 503, 656, 1189, 1454 |
| GlaI | GCGC | 1 cut(s) | 885 |
| GluI | GCNGC | 6 cut(s) | 5, 45, 503, 656, 1189, 1454 |
| GsuI | CTGGAG | 2 cut(s) | 722, 1269 |
| HaeII | RGCGCY | 1 cut(s) | 887 |
| HaeIII | GGCC | 2 cut(s) | 1102, 1469 |
| HgaI | GACGC | 2 cut(s) | 979, 1453 |
| HhaI | GCGC | 1 cut(s) | 886 |
| Hin1I | GRCGYC | 3 cut(s) | 884, 990, 1445 |
| Hin1II | CATG | 9 cut(s) | 124, 257, 613, 772, 925, 974, 1195, 1295, 1521 |
| Hin6I | GCGC | 1 cut(s) | 884 |
| HinP1I | GCGC | 1 cut(s) | 884 |
| HincII | GTYRAC | 2 cut(s) | 994, 1443 |
| HindII | GTYRAC | 2 cut(s) | 994, 1443 |
| HphI | GGTGA | 3 cut(s) | 562, 829, 986 |
| Hpy166II | GTNNAC | 6 cut(s) | 994, 1147, 1360, 1417, 1443, 1536 |
| Hpy188III | TCNNGA | 8 cut(s) | 163, 179, 227, 254, 285, 470, 1210, 1557 |
| Hpy8I | GTNNAC | 6 cut(s) | 994, 1147, 1360, 1417, 1443, 1536 |
| Hpy99I | CGWCG | 7 cut(s) | 89, 208, 428, 440, 995, 1081, 1108 |
| HpyAV | CCTTC | 4 cut(s) | 46, 615, 619, 979 |
| HpyCH4III | ACNGT | 3 cut(s) | 201, 868, 1177 |
| HpyCH4IV | ACGT | 3 cut(s) | 135, 1130, 1540 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 810, 1305, 1453, 1466, 1475 |
| HpyF3I | CTNAG | 6 cut(s) | 278, 327, 468, 783, 1137, 1411 |
| HpySE526I | ACGT | 3 cut(s) | 135, 1130, 1540 |
| Hsp92I | GRCGYC | 3 cut(s) | 884, 990, 1445 |
| Hsp92II | CATG | 9 cut(s) | 124, 257, 613, 772, 925, 974, 1195, 1295, 1521 |
| HspAI | GCGC | 1 cut(s) | 884 |
| KasI | GGCGCC | 1 cut(s) | 883 |
| Kzo9I | GATC | 7 cut(s) | 409, 439, 544, 913, 1058, 1066, 1159 |
| LguI | GCTCTTC | 1 cut(s) | 803 |
| LmnI | GCTCC | 3 cut(s) | 595, 833, 1450 |
| Lsp1109I | GCAGC | 4 cut(s) | 16, 667, 1200, 1465 |
| LweI | GCATC | 2 cut(s) | 1390, 1494 |
| MaeII | ACGT | 3 cut(s) | 135, 1130, 1540 |
| MaeIII | GTNAC | 2 cut(s) | 550, 601 |
| MalI | GATC | 7 cut(s) | 411, 441, 546, 915, 1060, 1068, 1161 |
| MbiI | CCGCTC | 1 cut(s) | 1554 |
| MboI | GATC | 7 cut(s) | 409, 439, 544, 913, 1058, 1066, 1159 |
| MfeI | CAATTG | 1 cut(s) | 293 |
| MhlI | GDGCHC | 3 cut(s) | 284, 1301, 1419 |
| MluCI | AATT | 9 cut(s) | 293, 352, 452, 707, 904, 960, 979, 1002, 1266 |
| Mly113I | GGCGCC | 1 cut(s) | 884 |
| MlyI | GAGTC | 2 cut(s) | 239, 547 |
| MmeI | TCCRAC | 3 cut(s) | 321, 351, 715 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1526 |
| MseI | TTAA | 2 cut(s) | 684, 963 |
| MspR9I | CCNGG | 5 cut(s) | 221, 801, 1466, 1503, 1504 |
| MunI | CAATTG | 1 cut(s) | 293 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 810, 1305, 1453, 1466, 1475 |
| NarI | GGCGCC | 1 cut(s) | 884 |
| NciI | CCSGG | 5 cut(s) | 221, 801, 1466, 1503, 1504 |
| NdeII | GATC | 7 cut(s) | 409, 439, 544, 913, 1058, 1066, 1159 |
| NlaIII | CATG | 9 cut(s) | 124, 257, 613, 772, 925, 974, 1195, 1295, 1521 |
| NlaIV | GGNNCC | 3 cut(s) | 829, 885, 1496 |
| NmeAIII | GCCGAG | 1 cut(s) | 175 |
| NmuCI | GTSAC | 2 cut(s) | 550, 601 |
| NspI | RCATGY | 3 cut(s) | 925, 1195, 1295 |
| PaeR7I | CTCGAG | 2 cut(s) | 163, 283 |
| PagI | TCATGA | 1 cut(s) | 253 |
| PciSI | GCTCTTC | 1 cut(s) | 803 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 432 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1526 |
| PfeI | GAWTC | 9 cut(s) | 38, 316, 346, 629, 740, 748, 764, 899, 937 |
| PkrI | GCNGC | 6 cut(s) | 6, 46, 504, 657, 1190, 1455 |
| PleI | GAGTC | 2 cut(s) | 239, 547 |
| PluTI | GGCGCC | 1 cut(s) | 887 |
| PpsI | GAGTC | 2 cut(s) | 239, 547 |
| Ppu21I | YACGTR | 1 cut(s) | 1541 |
| PshAI | GACNNNNGTC | 2 cut(s) | 202, 1175 |
| PsiI | TTATAA | 2 cut(s) | 858, 1124 |
| Psp124BI | GAGCTC | 1 cut(s) | 284 |
| PspN4I | GGNNCC | 3 cut(s) | 829, 885, 1496 |
| PspPI | GGNCC | 3 cut(s) | 1096, 1170, 1303 |
| RsaI | GTAC | 6 cut(s) | 57, 125, 638, 1085, 1112, 1535 |
| RsaNI | GTAC | 6 cut(s) | 56, 124, 637, 1084, 1111, 1534 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1303 |
| RsrII | CGGWCCG | 1 cut(s) | 1303 |
| SacI | GAGCTC | 1 cut(s) | 284 |
| SalI | GTCGAC | 1 cut(s) | 992 |
| SapI | GCTCTTC | 1 cut(s) | 803 |
| SaqAI | TTAA | 2 cut(s) | 684, 963 |
| SatI | GCNGC | 6 cut(s) | 5, 45, 503, 656, 1189, 1454 |
| Sau3AI | GATC | 7 cut(s) | 409, 439, 544, 913, 1058, 1066, 1159 |
| Sau96I | GGNCC | 3 cut(s) | 1096, 1170, 1303 |
| SchI | GAGTC | 2 cut(s) | 239, 547 |
| ScrFI | CCNGG | 5 cut(s) | 221, 801, 1466, 1503, 1504 |
| SduI | GDGCHC | 3 cut(s) | 284, 1301, 1419 |
| SfaNI | GCATC | 2 cut(s) | 1390, 1494 |
| SfcI | CTRYAG | 1 cut(s) | 185 |
| SfoI | GGCGCC | 1 cut(s) | 885 |
| Sfr274I | CTCGAG | 2 cut(s) | 163, 283 |
| SinI | GGWCC | 3 cut(s) | 1096, 1170, 1303 |
| SlaI | CTCGAG | 2 cut(s) | 163, 283 |
| SmaI | CCCGGG | 1 cut(s) | 1504 |
| SmlI | CTYRAG | 3 cut(s) | 163, 177, 283 |
| SmoI | CTYRAG | 3 cut(s) | 163, 177, 283 |
| Sse9I | AATT | 9 cut(s) | 293, 352, 452, 707, 904, 960, 979, 1002, 1266 |
| SsiI | CCGC | 5 cut(s) | 44, 503, 1306, 1393, 1552 |
| SspDI | GGCGCC | 1 cut(s) | 883 |
| SstI | GAGCTC | 1 cut(s) | 284 |
| StyD4I | CCNGG | 5 cut(s) | 219, 799, 1464, 1501, 1502 |
| TaaI | ACNGT | 3 cut(s) | 201, 868, 1177 |
| TaiI | ACGT | 3 cut(s) | 138, 1133, 1543 |
| TaqI | TCGA | 9 cut(s) | 164, 206, 284, 426, 543, 751, 940, 993, 1065 |
| TaqII | GACCGA | 2 cut(s) | 88, 257 |
| TasI | AATT | 9 cut(s) | 293, 352, 452, 707, 904, 960, 979, 1002, 1266 |
| TatI | WGTACW | 2 cut(s) | 123, 1533 |
| TauI | GCSGC | 2 cut(s) | 47, 505 |
| TfiI | GAWTC | 9 cut(s) | 38, 316, 346, 629, 740, 748, 764, 899, 937 |
| Tru1I | TTAA | 2 cut(s) | 684, 963 |
| Tru9I | TTAA | 2 cut(s) | 684, 963 |
| TscAI | CASTG | 4 cut(s) | 750, 764, 1293, 1419 |
| TseFI | GTSAC | 2 cut(s) | 550, 601 |
| TseI | GCWGC | 4 cut(s) | 4, 655, 1188, 1453 |
| Tsp45I | GTSAC | 2 cut(s) | 550, 601 |
| TspDTI | ATGAA | 8 cut(s) | 65, 109, 242, 270, 405, 1043, 1058, 1361 |
| TspGWI | ACGGA | 4 cut(s) | 543, 608, 1094, 1316 |
| TspMI | CCCGGG | 1 cut(s) | 1502 |
| TspRI | CASTG | 4 cut(s) | 750, 764, 1293, 1419 |
| VneI | GTGCAC | 1 cut(s) | 1415 |
| VpaK11BI | GGWCC | 3 cut(s) | 1096, 1170, 1303 |
| XapI | RAATTY | 1 cut(s) | 904 |
| XceI | RCATGY | 3 cut(s) | 925, 1195, 1295 |
| XhoI | CTCGAG | 2 cut(s) | 163, 283 |
| XmaI | CCCGGG | 1 cut(s) | 1502 |
| XmiI | GTMKAC | 1 cut(s) | 993 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1526 |