Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0004037

Physical Location & Seq

Genomic Coordinates Reverse (-)

7537992 .. 7541615

Gene Structure 3624 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00286550.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1506 bp

ATGCAGATACCTCGCAGAAAAACACCCTTCTCTTCTTCACCTGAAGCTTTCGCAATTATGAAGAGCCGCAAGAACAATAATCTACCAATCTTCGTCGTCGTCTTCTCGATTTTTCTGTTTGGGATTTTCATGTACAATGAGGACGTCAAATCAATCGCAGAATTCCCATTCTCTTCTAGCCCAAAAGAGCAAGAACTCCGAGAAGCGCAAGAAACGAAACAGAGCACCCCTGTTTCGAAACAGAGCGACTCTGTTTCCGAAATCCCGAACAGGGTTTCTCTAAGCGCCACTTCAAGAACCCAATTGGAGGAAACCCAGTTGGAGAATCCGGTTTCTGAAGAGACCCAAGAACCTGTGGAGCTGAAAACGATCATGGAAGAGAAAGACGAAGACCTGGACAAGAAGATTGAGGTGAATGAAGAAGATGATATGGAAGAGATTGAATTGCCTCCTGAAGATTGTGACTTGTTTAATGGGGATTGGGTTTTCGATCCTGTGACTCATCCTTTGTATAAAGAAGACGAATGTGAGTTCTTGACAGCCCAAGTGACTTGTATGAGGAATGGAAGAAAGGACTCTCTGTATCAACATTGGAGATGGCAGCCCAGAGATTGTAATCTTCCAAAGTTCAATGCAAGATTGTTGCTAGAGAAACTAAGAAACAAGAGGCTCATGTTTGTGGGGGACTCGTTGAATAGAAACCAGTGGGAATCAATGATATGTTTTGCGCAGTCTGTAATTCCTCCTGGGAGAAAGACCTTGGTGAAGAATGGATCTCTCTCTGTTTTCAGAATTGAGGATTATAATGCTACGGTGGAGTTCTACTGGGCACCATTTCTGGTGGAGTCAAATTCAGATGATCCATTGATGCACAGCATACAAAACCGTATAATCATGCCCAAATCGATTAAGAAGCATGGTAAAAATTGGATAGGTGTGGACTACCTCATTTTCAACACATACATATGGTGGATGAACACTTTCAACATGAAAGTTCTACGAGGATCGTTCGATCAAGGAGCAACGGAGTATGATGAGATCGACCGGCCGTTGGCTTACCGGAAAGTTATGACAACATGGGCGAAATGGGTGGACAAAAATATTGACCCCAATCGTACCACTGTCTTCTTCACCAGCATGTCTCCTCTCCACATCAAGAGCTTGGATTGGGACAACCCAGATGGCATAAAATGTGCCAAAGAGACCACTCCAATCCTGAACAGAACGACACCGTTGGAAGTGGGCACAGACAGAAGGCTCTTTGTGATTTCAAGCGACATAGTGAAAGCAATGGAAGTGCCTGTTTACTTTCTCAACATTACTACTCTTTCCGAGTTTCGTAAAGATGCACATACCTCGGTCCATACCATCAGGCAAGGCAAGATGTTGACGCCGGAGCAGCAAGCTGACCCGGAGAATTACGCCGATTGCATCCACTGGTGCCTCCCCGGGCTGCCAGACACATGGAACGAGTTTCTTTACACGCGTATCATCTCGCGGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005975 GO:0005976 GO:0006355 GO:0006950 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009059 GO:0009266 GO:0009409 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010383 GO:0010410 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0016051 GO:0016407 GO:0016413 GO:0016740 GO:0016746 GO:0016747 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0045491 GO:0045492 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050826 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070589 GO:0070592 GO:0071554 GO:0071704 GO:0071840 GO:0080090 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990538 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PC-Esterase PMR5N

Protein Analysis

501

Amino Acids

58.43

Weight (kDa)

5.22

Isoelectric Point (pI)

52.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMR5N	PF14416	153 - 206	1.2e-22	PMR5 N terminal Domain
PC-Esterase	PF13839	207 - 495	3.8e-93	GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004037)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40150 AT2G40160 AT2G40160 AT2G40160 AT3G55990
fragaria_vesca	FvH4_7g24620
malus_domestica	MD01G1154500.v1.1 MD07G1223300.v1.1
prunus_persica	Prupe.2G251900_v2.0.a1
pyrus_communis	pycom01g17170 pycom07g20190 pycom07g20200
rosa_chinensis	RchiOBHm_Chr1g0367551 RchiOBHm_Chr1g0370451
rosa_laevigata	RLG00000004529 RLG00000004557 RLG00000008944 RLG00000027040 RLG00000036183
rosa_multiflora	Rmu_sc0005656.1_g000014
rosa_roxburghii	Rroxscaffold_4G00286550
rosa_rugosa	Rorug01G0356900
rosa_samantha	Rh1BG328300 Rh1CG341400 Rh2CG472100 Rh2CG472200 Rh2DG621700 Rh7DG249300 Rh7DG249400 Rh7DG445600
rosa_wichuraiana	Rw1G010640 Rw1G032200 Rw6G015350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	804
AatII	GACGTC	1 cut(s)	147
Acc16I	TGCGCA	1 cut(s)	729
AccB1I	GGYRCC	2 cut(s)	829, 1440
AccII	CGCG	2 cut(s)	1486, 1498
AciI	CCGC	2 cut(s)	67, 1498
AclWI	GGATC	4 cut(s)	485, 781, 854, 1012
AcoI	YGGCCR	1 cut(s)	1046
AcsI	RAATTY	2 cut(s)	161, 850
AcuI	CTGAAG	3 cut(s)	63, 357, 474
AcyI	GRCGYC	2 cut(s)	144, 1391
AfaI	GTAC	2 cut(s)	134, 1117
AfiI	CCNNNNNNNGG	3 cut(s)	271, 307, 1051
AflIII	ACRYGT	1 cut(s)	1484
AgsI	TTSAA	7 cut(s)	294, 443, 631, 694, 955, 985, 1272
AjnI	CCWGG	2 cut(s)	393, 745
AluBI	AGCT	4 cut(s)	47, 361, 1161, 1406
AluI	AGCT	4 cut(s)	47, 361, 1161, 1406
Alw21I	GWGCWC	1 cut(s)	227
Alw26I	GTCTC	3 cut(s)	335, 1146, 1196
AlwI	GGATC	4 cut(s)	485, 781, 854, 1012
Ama87I	CYCGRG	1 cut(s)	1448
AoxI	GGCC	1 cut(s)	1046
ApeKI	GCWGC	3 cut(s)	601, 1399, 1453
ApoI	RAATTY	2 cut(s)	161, 850
ArsI	GACNNNNNNTTYG	2 cut(s)	490, 522
Asp700I	GAANNNNTTC	1 cut(s)	980
AspLEI	GCGC	3 cut(s)	208, 287, 730
AspS9I	GGNCC	1 cut(s)	1360
AsuC2I	CCSGG	3 cut(s)	1412, 1449, 1450
AsuHPI	GGTGA	4 cut(s)	30, 424, 775, 1123
AsuII	TTCGAA	1 cut(s)	236
AvaI	CYCGRG	1 cut(s)	1448
AvaII	GGWCC	1 cut(s)	1360
BaeGI	GKGCMC	2 cut(s)	832, 1247
BaeI	ACNNNNGTAYC	2 cut(s)	1471, 1504
BanI	GGYRCC	2 cut(s)	829, 1440
BbsI	GAAGAC	4 cut(s)	94, 396, 525, 1117
Bbv12I	GWGCWC	1 cut(s)	227
BbvI	GCAGC	3 cut(s)	613, 1411, 1440
BccI	CCATC	3 cut(s)	591, 1175, 1376
BceAI	ACGGC	1 cut(s)	1033
BcgI	CGANNNNNNTGC	3 cut(s)	27, 1338, 1372
BciT130I	CCWGG	2 cut(s)	395, 747
BcnI	CCSGG	3 cut(s)	1412, 1449, 1450
BcoDI	GTCTC	3 cut(s)	335, 1146, 1196
BfaI	CTAG	2 cut(s)	177, 647
BfoI	RGCGCY	1 cut(s)	288
BisI	GCNGC	4 cut(s)	67, 602, 1400, 1454
BlsI	GCNGC	4 cut(s)	68, 603, 1401, 1455
Bme1390I	CCNGG	5 cut(s)	395, 747, 1412, 1449, 1450
Bme18I	GGWCC	1 cut(s)	1360
BmeT110I	CYCGRG	1 cut(s)	1448
BmgT120I	GGNCC	1 cut(s)	1360
BmiI	GGNNCC	2 cut(s)	831, 1442
BmrFI	CCNGG	5 cut(s)	395, 747, 1412, 1449, 1450
BmrI	ACTGGG	2 cut(s)	310, 835
BmsI	GCATC	3 cut(s)	858, 1336, 1440
BmuI	ACTGGG	2 cut(s)	310, 835
BpiI	GAAGAC	4 cut(s)	94, 396, 525, 1117
Bpu14I	TTCGAA	1 cut(s)	236
BpuMI	CCSGG	3 cut(s)	1412, 1449, 1450
Bsa29I	ATCGAT	1 cut(s)	905
BsaBI	GATNNNNATC	1 cut(s)	615
BsaHI	GRCGYC	2 cut(s)	144, 1391
BsaI	GGTCTC	2 cut(s)	335, 1196
BsaJI	CCNNGG	5 cut(s)	746, 759, 1356, 1447, 1448
BsaWI	WCCGGW	2 cut(s)	328, 1059
Bsc4I	CCNNNNNNNGG	3 cut(s)	271, 307, 1051
Bse118I	RCCGGY	1 cut(s)	1044
Bse1I	ACTGG	4 cut(s)	316, 703, 830, 1442
Bse3DI	GCAATG	1 cut(s)	1296
Bse8I	GATNNNNATC	1 cut(s)	615
BseBI	CCWGG	2 cut(s)	395, 747
BseCI	ATCGAT	1 cut(s)	905
BseDI	CCNNGG	5 cut(s)	746, 759, 1356, 1447, 1448
BseGI	GGATG	3 cut(s)	502, 978, 1431
BseJI	GATNNNNATC	1 cut(s)	615
BseLI	CCNNNNNNNGG	3 cut(s)	271, 307, 1051
BseMI	GCAATG	1 cut(s)	1296
BseNI	ACTGG	4 cut(s)	316, 703, 830, 1442
BseRI	GAGGAG	1 cut(s)	1134
BseSI	GKGCMC	2 cut(s)	832, 1247
BseX3I	CGGCCG	1 cut(s)	1046
BseXI	GCAGC	3 cut(s)	613, 1411, 1440
Bsh1236I	CGCG	2 cut(s)	1486, 1498
Bsh1285I	CGRYCG	2 cut(s)	1045, 1049
BshFI	GGCC	1 cut(s)	1048
BshNI	GGYRCC	2 cut(s)	829, 1440
BshVI	ATCGAT	1 cut(s)	905
BsiEI	CGRYCG	2 cut(s)	1045, 1049
BsiHKAI	GWGCWC	1 cut(s)	227
BsiHKCI	CYCGRG	1 cut(s)	1448
BsiSI	CCGG	6 cut(s)	329, 1045, 1060, 1394, 1412, 1449
BslFI	GGGAC	2 cut(s)	698, 1184
BslI	CCNNNNNNNGG	3 cut(s)	271, 307, 1051
BsmAI	GTCTC	3 cut(s)	335, 1146, 1196
BsmFI	GGGAC	2 cut(s)	698, 1184
BsnI	GGCC	1 cut(s)	1048
Bso31I	GGTCTC	2 cut(s)	335, 1196
BsoBI	CYCGRG	1 cut(s)	1448
Bsp119I	TTCGAA	1 cut(s)	236
Bsp1286I	GDGCHC	3 cut(s)	227, 832, 1247
Bsp1407I	TGTACA	1 cut(s)	132
Bsp143I	GATC	7 cut(s)	369, 490, 773, 859, 1004, 1012, 1038
BspACI	CCGC	2 cut(s)	67, 1498
BspANI	GGCC	1 cut(s)	1048
BspDI	ATCGAT	1 cut(s)	905
BspFNI	CGCG	2 cut(s)	1486, 1498
BspLI	GGNNCC	2 cut(s)	831, 1442
BspPI	GGATC	4 cut(s)	485, 781, 854, 1012
BspQI	GCTCTTC	1 cut(s)	56
BspT104I	TTCGAA	1 cut(s)	236
BspT107I	GGYRCC	2 cut(s)	829, 1440
BspTNI	GGTCTC	2 cut(s)	335, 1196
BsrDI	GCAATG	1 cut(s)	1296
BsrFI	RCCGGY	1 cut(s)	1044
BsrGI	TGTACA	1 cut(s)	132
BsrI	ACTGG	4 cut(s)	316, 703, 830, 1442
BssAI	RCCGGY	1 cut(s)	1044
BssECI	CCNNGG	5 cut(s)	746, 759, 1356, 1447, 1448
BssMI	GATC	7 cut(s)	369, 490, 773, 859, 1004, 1012, 1038
BssNI	GRCGYC	2 cut(s)	144, 1391
BssT1I	CCWWGG	1 cut(s)	759
Bst2UI	CCWGG	2 cut(s)	395, 747
Bst4CI	ACNGT	4 cut(s)	814, 887, 1123, 1233
Bst6I	CTCTTC	6 cut(s)	37, 56, 178, 333, 372, 429
BstACI	GRCGYC	2 cut(s)	144, 1391
BstAUI	TGTACA	1 cut(s)	132
BstBI	TTCGAA	1 cut(s)	236
BstC8I	GCNNGC	1 cut(s)	1404
BstDEI	CTNAG	2 cut(s)	281, 656
BstF5I	GGATG	3 cut(s)	502, 978, 1431
BstFNI	CGCG	2 cut(s)	1486, 1498
BstH2I	RGCGCY	1 cut(s)	288
BstHHI	GCGC	3 cut(s)	208, 287, 730
BstKTI	GATC	7 cut(s)	372, 493, 776, 862, 1007, 1015, 1041
BstMAI	GTCTC	3 cut(s)	335, 1146, 1196
BstMBI	GATC	7 cut(s)	369, 490, 773, 859, 1004, 1012, 1038
BstMCI	CGRYCG	2 cut(s)	1045, 1049
BstMWI	GCNNNNNNNGC	1 cut(s)	1399
BstNI	CCWGG	2 cut(s)	395, 747
BstNSI	RCATGY	1 cut(s)	1141
BstSCI	CCNGG	5 cut(s)	393, 745, 1410, 1447, 1448
BstSLI	GKGCMC	2 cut(s)	832, 1247
BstUI	CGCG	2 cut(s)	1486, 1498
BstV1I	GCAGC	3 cut(s)	613, 1411, 1440
BstV2I	GAAGAC	4 cut(s)	94, 396, 525, 1117
BstX2I	RGATCY	1 cut(s)	773
BstXI	CCANNNNNNTGG	1 cut(s)	1464
BstYI	RGATCY	1 cut(s)	773
BstZI	CGGCCG	1 cut(s)	1046
Bsu15I	ATCGAT	1 cut(s)	905
BsuRI	GGCC	1 cut(s)	1048
BsuTUI	ATCGAT	1 cut(s)	905
BtsCI	GGATG	3 cut(s)	502, 978, 1431
BtsIMutI	CAGTG	3 cut(s)	710, 1119, 1435
Cac8I	GCNNGC	1 cut(s)	1404
CfoI	GCGC	3 cut(s)	208, 287, 730
Cfr10I	RCCGGY	1 cut(s)	1044
Cfr13I	GGNCC	1 cut(s)	1360
Cfr9I	CCCGGG	1 cut(s)	1448
ClaI	ATCGAT	1 cut(s)	905
CseI	GACGC	1 cut(s)	1399
Csp6I	GTAC	2 cut(s)	133, 1116
CviAII	CATG	9 cut(s)	130, 373, 673, 895, 917, 988, 1077, 1138, 1464
CviQI	GTAC	2 cut(s)	133, 1116
DdeI	CTNAG	2 cut(s)	281, 656
DpnI	GATC	7 cut(s)	371, 492, 775, 861, 1006, 1014, 1040
DpnII	GATC	7 cut(s)	369, 490, 773, 859, 1004, 1012, 1038
EaeI	YGGCCR	1 cut(s)	1046
EagI	CGGCCG	1 cut(s)	1046
Eam1104I	CTCTTC	6 cut(s)	37, 56, 178, 333, 372, 429
EarI	CTCTTC	6 cut(s)	37, 56, 178, 333, 372, 429
EclXI	CGGCCG	1 cut(s)	1046
Eco130I	CCWWGG	1 cut(s)	759
Eco31I	GGTCTC	2 cut(s)	335, 1196
Eco47I	GGWCC	1 cut(s)	1360
Eco52I	CGGCCG	1 cut(s)	1046
Eco57I	CTGAAG	3 cut(s)	63, 357, 474
Eco88I	CYCGRG	1 cut(s)	1448
EcoRI	GAATTC	1 cut(s)	161
EcoRII	CCWGG	2 cut(s)	393, 745
EcoT14I	CCWWGG	1 cut(s)	759
ErhI	CCWWGG	1 cut(s)	759
FaeI	CATG	9 cut(s)	133, 376, 676, 898, 920, 991, 1080, 1141, 1467
FalI	AAGNNNNNCTT	2 cut(s)	274, 306
FaqI	GGGAC	2 cut(s)	698, 1184
FatI	CATG	9 cut(s)	129, 372, 672, 894, 916, 987, 1076, 1137, 1463
FauNDI	CATATG	1 cut(s)	965
Fnu4HI	GCNGC	4 cut(s)	67, 602, 1400, 1454
FokI	GGATG	3 cut(s)	489, 985, 1418
Fsp4HI	GCNGC	4 cut(s)	67, 602, 1400, 1454
FspBI	CTAG	2 cut(s)	177, 647
FspI	TGCGCA	1 cut(s)	729
GlaI	GCGC	3 cut(s)	207, 286, 729
GluI	GCNGC	4 cut(s)	67, 602, 1400, 1454
HaeII	RGCGCY	1 cut(s)	288
HaeIII	GGCC	1 cut(s)	1048
HapII	CCGG	6 cut(s)	329, 1045, 1060, 1394, 1412, 1449
HgaI	GACGC	1 cut(s)	1399
HhaI	GCGC	3 cut(s)	208, 287, 730
Hin1I	GRCGYC	2 cut(s)	144, 1391
Hin1II	CATG	9 cut(s)	133, 376, 676, 898, 920, 991, 1080, 1141, 1467
Hin6I	GCGC	3 cut(s)	206, 285, 728
HinP1I	GCGC	3 cut(s)	206, 285, 728
HincII	GTYRAC	1 cut(s)	1389
HindII	GTYRAC	1 cut(s)	1389
HindIII	AAGCTT	1 cut(s)	45
HinfI	GANTC	7 cut(s)	248, 325, 499, 575, 686, 710, 845
HpaII	CCGG	6 cut(s)	329, 1045, 1060, 1394, 1412, 1449
HphI	GGTGA	4 cut(s)	30, 424, 775, 1123
Hpy166II	GTNNAC	4 cut(s)	940, 1093, 1306, 1389
Hpy188I	TCNGA	6 cut(s)	200, 259, 337, 791, 856, 1333
Hpy188III	TCNNGA	8 cut(s)	106, 265, 294, 452, 535, 1156, 1216, 1503
Hpy8I	GTNNAC	4 cut(s)	940, 1093, 1306, 1389
Hpy99I	CGWCG	2 cut(s)	98, 101
HpyAV	CCTTC	2 cut(s)	37, 1248
HpyCH4III	ACNGT	4 cut(s)	814, 887, 1123, 1233
HpyCH4IV	ACGT	1 cut(s)	144
HpyCH4V	TGCA	5 cut(s)	4, 635, 871, 1349, 1431
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1399
HpyF3I	CTNAG	2 cut(s)	281, 656
HpySE526I	ACGT	1 cut(s)	144
Hsp92I	GRCGYC	2 cut(s)	144, 1391
Hsp92II	CATG	9 cut(s)	133, 376, 676, 898, 920, 991, 1080, 1141, 1467
HspAI	GCGC	3 cut(s)	206, 285, 728
Kzo9I	GATC	7 cut(s)	369, 490, 773, 859, 1004, 1012, 1038
LguI	GCTCTTC	1 cut(s)	56
LmnI	GCTCC	3 cut(s)	358, 1019, 1396
Lsp1109I	GCAGC	3 cut(s)	613, 1411, 1440
LweI	GCATC	3 cut(s)	858, 1336, 1440
MaeI	CTAG	2 cut(s)	177, 647
MaeII	ACGT	1 cut(s)	144
MaeIII	GTNAC	3 cut(s)	461, 496, 547
MalI	GATC	7 cut(s)	371, 492, 775, 861, 1006, 1014, 1040
MboI	GATC	7 cut(s)	369, 490, 773, 859, 1004, 1012, 1038
MfeI	CAATTG	1 cut(s)	302
MflI	RGATCY	1 cut(s)	773
MhlI	GDGCHC	3 cut(s)	227, 832, 1247
MluCI	AATT	9 cut(s)	54, 161, 302, 443, 738, 792, 850, 925, 1417
MluI	ACGCGT	1 cut(s)	1484
MlyI	GAGTC	5 cut(s)	242, 493, 569, 680, 854
MmeI	TCCRAC	2 cut(s)	300, 1215
MroXI	GAANNNNTTC	1 cut(s)	980
MseI	TTAA	2 cut(s)	471, 909
MslI	CAYNNNNRTG	3 cut(s)	677, 964, 1136
MspI	CCGG	6 cut(s)	329, 1045, 1060, 1394, 1412, 1449
MspR9I	CCNGG	5 cut(s)	395, 747, 1412, 1449, 1450
MunI	CAATTG	1 cut(s)	302
MvaI	CCWGG	2 cut(s)	395, 747
MvnI	CGCG	2 cut(s)	1486, 1498
MwoI	GCNNNNNNNGC	1 cut(s)	1399
NciI	CCSGG	3 cut(s)	1412, 1449, 1450
NdeI	CATATG	1 cut(s)	965
NdeII	GATC	7 cut(s)	369, 490, 773, 859, 1004, 1012, 1038
NlaIII	CATG	9 cut(s)	133, 376, 676, 898, 920, 991, 1080, 1141, 1467
NlaIV	GGNNCC	2 cut(s)	831, 1442
NmuCI	GTSAC	3 cut(s)	461, 496, 547
NsbI	TGCGCA	1 cut(s)	729
NspI	RCATGY	1 cut(s)	1141
NspV	TTCGAA	1 cut(s)	236
PciSI	GCTCTTC	1 cut(s)	56
PdmI	GAANNNNTTC	1 cut(s)	980
PfeI	GAWTC	2 cut(s)	325, 710
PkrI	GCNGC	4 cut(s)	68, 603, 1401, 1455
PleI	GAGTC	5 cut(s)	242, 493, 569, 680, 853
PpsI	GAGTC	5 cut(s)	242, 493, 569, 680, 853
PsiI	TTATAA	1 cut(s)	804
Psp6I	CCWGG	2 cut(s)	393, 745
PspGI	CCWGG	2 cut(s)	393, 745
PspN4I	GGNNCC	2 cut(s)	831, 1442
PspPI	GGNCC	1 cut(s)	1360
PsuI	RGATCY	1 cut(s)	773
RsaI	GTAC	2 cut(s)	134, 1117
RsaNI	GTAC	2 cut(s)	133, 1116
RseI	CAYNNNNRTG	3 cut(s)	677, 964, 1136
SapI	GCTCTTC	1 cut(s)	56
SaqAI	TTAA	2 cut(s)	471, 909
SatI	GCNGC	4 cut(s)	67, 602, 1400, 1454
Sau3AI	GATC	7 cut(s)	369, 490, 773, 859, 1004, 1012, 1038
Sau96I	GGNCC	1 cut(s)	1360
SchI	GAGTC	5 cut(s)	242, 493, 569, 680, 854
ScrFI	CCNGG	5 cut(s)	395, 747, 1412, 1449, 1450
SduI	GDGCHC	3 cut(s)	227, 832, 1247
SfaNI	GCATC	3 cut(s)	858, 1336, 1440
SfuI	TTCGAA	1 cut(s)	236
SinI	GGWCC	1 cut(s)	1360
SmaI	CCCGGG	1 cut(s)	1450
SmiMI	CAYNNNNRTG	3 cut(s)	677, 964, 1136
Sse9I	AATT	9 cut(s)	54, 161, 302, 443, 738, 792, 850, 925, 1417
SsiI	CCGC	2 cut(s)	67, 1498
SspI	AATATT	1 cut(s)	1102
SspMI	CTAG	2 cut(s)	177, 647
StyD4I	CCNGG	5 cut(s)	393, 745, 1410, 1447, 1448
StyI	CCWWGG	1 cut(s)	759
TaaI	ACNGT	4 cut(s)	814, 887, 1123, 1233
TaiI	ACGT	1 cut(s)	147
TaqI	TCGA	6 cut(s)	107, 236, 489, 905, 1011, 1041
TaqII	GACCGA	1 cut(s)	1348
TasI	AATT	9 cut(s)	54, 161, 302, 443, 738, 792, 850, 925, 1417
TatI	WGTACW	1 cut(s)	132
TauI	GCSGC	1 cut(s)	69
TfiI	GAWTC	2 cut(s)	325, 710
Tru1I	TTAA	2 cut(s)	471, 909
Tru9I	TTAA	2 cut(s)	471, 909
TscAI	CASTG	3 cut(s)	710, 1126, 1442
TseFI	GTSAC	3 cut(s)	461, 496, 547
TseI	GCWGC	3 cut(s)	601, 1399, 1453
Tsp45I	GTSAC	3 cut(s)	461, 496, 547
TspDTI	ATGAA	5 cut(s)	74, 118, 432, 989, 1004
TspGWI	ACGGA	1 cut(s)	1040
TspMI	CCCGGG	1 cut(s)	1448
TspRI	CASTG	3 cut(s)	710, 1126, 1442
VpaK11BI	GGWCC	1 cut(s)	1360
XapI	RAATTY	2 cut(s)	161, 850
XceI	RCATGY	1 cut(s)	1141
XmaI	CCCGGG	1 cut(s)	1448
XmnI	GAANNNNTTC	1 cut(s)	980
XspI	CTAG	2 cut(s)	177, 647
ZraI	GACGTC	1 cut(s)	145

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.