Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0000603

Physical Location & Seq

Genomic Coordinates Reverse (-)

23563075 .. 23568217

Gene Structure 5143 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1147500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGTCGATTTTTTGGCAAGTTCCTCAGTATTTTATTATAGGGTGTGCTGAGGTTTTCACATTTATTGGGCAACTGGAGTTTTTCTATGAGCAGGCTCCTGATGCAATGAGGAGTTTGTGTTCTGCTCTTTCCCTTACAACTGCTGCTTTGGGGAACTATTTGAGTACAATGCTGGTGAACATTGTGACCGATGTGAGCTCTAAGGATGGGAAGCCAAGATGGATTCCAGACAACTTGAATTATGGACACCTTCACTACTTTTTCTGGCTTTTGGCTTTGTTAAGTGTGGTGAATTTAGGGTTTTATCTTTTGGTTGCTAGATGGTACACTTACAAGAGGGCAGTGGTACCTACTATGGCAGACAGTGATCTTTACACAAACGATGGGACCGTGGACATCCATAAAAAACCGGCTAACAAGAAGAAGACTGGAAATTGGAAGGCATGCCGCTTTATTCTCGGTAATGAATGCTGTGAAAGATTGGCATACTACGGAATGGGTACCAATCTAGTGAACTATCTCGAGAAACGTCTCGGCATGGGAACTGCCAAGGCAGCGACCAGCGTCTCTAATTGGTCAGGGACGTGCTACGCGACACCATTGATAGGAGCCTTCCTGGCTGATGCATACTTGGGAAGATATTGGACAATTGCCATCTTTTCAATCGTTTATGTTCTTGGTATGACTCTCTTGACCCTCACTGCATCTATCAATGGATTAAAACCACATTGCGATAGCTCTGGTTGCAACGCAACAGCATCCCAAAGAGCGGCCTGCTTTGTAGCGCTGTACTTGATTGCAATAGGTACTGGTGGAATCAAGCCATGCGTTTCATCCTTCGGCGCAGATCAATTTGATGAAACTGACGAAACTGAGAGGAAGAAGAAGAGCTCCTTCTTCAACTGGTTTTACATGTCAATCAATGTCGGTGCGCTTATTGCTTCCACGGTTTTGGTCTGGATGCAAATGAATGTAGGATGGAATTGGGGGTTCGGAGTCCCAGCAGTTGCAATGGCGATTGCGGTTGTGTTCTTTTTCTCGGGAAGCAAGTTATATCGTCTTCAGAAACCGGGCGGGAGTCCCCTCACAAGGATTGCTCAGGTGGTTGTTGCATCCATCAGGAAATGCAAAGTGAAAATTCCTGCTAACAAGTCTCTTCTCTATGAGACTGCAGATGAGGAGTGCAACATCCAAGGAAGTCGGAAGCTTGAGCACACCAACAAATTAGGGTTCTTTGACAAGGCAGCTGTGGAGTCAGAGACAGACCGTGCAAAGGAACTGCCAAGCCCATGGAGCCTCTGTACAGTGACACAAGTAGAGGAGCTAAAATCCGTCATCAGACTACTCCCAATCTGGGCGTCCGGTATCGTCTTCGCCACCGTCTACGGCCAAATGAGCACAATGTTTGTCCTCCAAGGCAACACCCTAGACCAACACATGGGCCCAAACTTCAAGATCCCATCAGCCTCCCTCTCCGTCTTTGACACGGCCAGCGTCCTCTTCTGGGCACCGATCTACGACAAGCTCCTCGTCCCCCTCGCCAGGCGCTTCACGGGCCACGAACGAGGGTTCACGACGCTGCAACGGATGGGAATCGGCCTAGCACTGTCCATTTTTTCCATGGTTGTTGCTGGGATTTTGGAGGTTGTTAGGCTTGGCACTGTAAGAAAAAATAATTACTACGACCTAGAGTACATTCCCATGTCAATTTTCTGGCAGGTCCCGCAGTATTTCATCATTGGGTGTGCTGAGGTTTTCACCTTCATTGGGCAGATGGAGTTTTTTTACGACCAAGCGCCGGATGCCATGAGAAGCTTGTGCTCTGCACTGTCACTTACCACTGTTGCACTGGGGAATTACCTCAGCACTCTGCTAGTTACTGTGGTAACTAAAGTTACCAAGAAGAATGGGAATCTTGGGTGGATTCCGGATAACCTTAACAGGGGACACCTGGACTATTTTTATTGGCTGTTGGCTGTTCTGAGCGTTATTAATTTCTTGGTGTACCTCTGGATTGCTAAGTGGTTTACGTACAAGAAGGCGACTGGGCGTGCTCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006807 GO:0006810 GO:0006857 GO:0008150 GO:0008152 GO:0009506 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0015833 GO:0016020 GO:0016043 GO:0016049 GO:0022414 GO:0022857 GO:0030054 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0035672 GO:0035673 GO:0040007 GO:0042886 GO:0042887 GO:0042937 GO:0042938 GO:0042939 GO:0044464 GO:0044706 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051179 GO:0051234 GO:0051704 GO:0055044 GO:0055085 GO:0060560 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PTR2

Protein Analysis

687

Amino Acids

76.6

Weight (kDa)

8.97

Isoelectric Point (pI)

28.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PTR2	PF00854	1 - 74	1.8e-14	POT family
PTR2	PF00854	214 - 642	3.6e-124	POT family
MFS_1	PF07690	291 - 619	3.5e-10	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000603)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54140 AT3G54140 AT5G01180 AT5G01180 AT5G01180
fragaria_vesca	FvH4_3g38120 FvH4_6g11961 FvH4_6g11970 FvH4_6g11970 FvH4_6g11970 FvH4_6g11970 FvH4_7g07580 FvH4_7g07580
malus_domestica	MD03G1076900.v1.1 MD04G1147500.v1.1 MD11G1081100.v1.1 MD11G1081200.v1.1 MD12G1160700.v1.1 MD12G1160900.v1.1
prunus_persica	Prupe.6G061500_v2.0.a1 Prupe.6G271100_v2.0.a1 Prupe.6G271200_v2.0.a1
pyrus_communis	pycom03g06080 pycom11g06920 pycom11g06940 pycom12g15250 pycom12g15270
rosa_chinensis	RchiOBHm_Chr1g0343091 RchiOBHm_Chr3g0463781 RchiOBHm_Chr3g0463791 RchiOBHm_Chr5g0068471 RchiOBHm_Chr5g0068501
rosa_laevigata	RLG00000024756 RLG00000024757 RLG00000029203 RLG00000035978 RLG00000035979
rosa_multiflora	Rmu_co8449979.1_g000001 Rmu_sc0000313.1_g000001 Rmu_sc0003221.1_g000016 Rmu_sc0003221.1_g000025 Rmu_sc0003221.1_g000026 Rmu_sc0004796.1_g000013 Rmu_sc0005087.1_g000011 Rmu_sc0008896.1_g000017 Rmu_sc0010201.1_g000001 Rmu_sc0017585.1_g000005
rosa_roxburghii	Rroxscaffold_1G00012300 Rroxscaffold_1G00012310 Rroxscaffold_1G00013040 Rroxscaffold_1G00013050 Rroxscaffold_4G00313320 Rroxscaffold_6G00416290 Rroxscaffold_6G00416300
rosa_rugosa	Rorug01G0144300.1 Rorug03G0067500 Rorug03G0067600 Rorug03G0067700 Rorug05G0390200 Rorug05G0390300 Rorug05G0390400.1 Rorug05G0390500 Rorug05G0390600 Rorug05G0390700
rosa_samantha	Rh1BG127900 Rh1CG150400 Rh1DG164100 Rh3AG124700 Rh3AG124800 Rh3CG131600 Rh3DG130100 Rh3DG130200 Rh5CG488500 Rh5DG480400 Rh5DG480600
rosa_wichuraiana	Rw1G013410 Rw3G010540 Rw3G010550 Rw5G041900 Rw5G041920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1708
Acc65I	GGTACC	2 cut(s)	346, 500
AccB1I	GGYRCC	3 cut(s)	346, 500, 1507
AccB7I	CCANNNNNTGG	1 cut(s)	1438
AccBSI	CCGCTC	1 cut(s)	770
AccI	GTMKAC	1 cut(s)	1383
AccII	CGCG	1 cut(s)	593
AccIII	TCCGGA	1 cut(s)	1927
AciI	CCGC	5 cut(s)	448, 770, 1022, 1074, 1724
AclWI	GGATC	1 cut(s)	1450
AcoI	YGGCCR	2 cut(s)	1387, 1488
AcsI	RAATTY	2 cut(s)	292, 1137
AcuI	CTGAAG	1 cut(s)	1046
AcyI	GRCGYC	1 cut(s)	1358
AfeI	AGCGCT	1 cut(s)	786
AflIII	ACRYGT	1 cut(s)	912
AgsI	TTSAA	4 cut(s)	238, 663, 901, 1453
AjiI	CACGTC	1 cut(s)	585
AjnI	CCWGG	3 cut(s)	615, 1541, 1950
AloI	GAACNNNNNNTCC	2 cut(s)	103, 135
AluBI	AGCT	8 cut(s)	198, 738, 891, 1207, 1247, 1324, 1525, 1815
AluI	AGCT	8 cut(s)	198, 738, 891, 1207, 1247, 1324, 1525, 1815
Alw21I	GWGCWC	6 cut(s)	200, 893, 1215, 1400, 1823, 2056
Alw26I	GTCTC	5 cut(s)	536, 571, 1158, 1160, 1253
AlwI	GGATC	1 cut(s)	1450
Ama87I	CYCGRG	2 cut(s)	521, 1039
Aor13HI	TCCGGA	1 cut(s)	1927
Aor51HI	AGCGCT	1 cut(s)	786
AoxI	GGCC	6 cut(s)	771, 1387, 1441, 1488, 1555, 1597
ApaI	GGGCCC	1 cut(s)	1445
ApeKI	GCWGC	4 cut(s)	143, 554, 1244, 1579
ApoI	RAATTY	2 cut(s)	292, 1137
AseI	ATTAAT	1 cut(s)	1992
Asp718I	GGTACC	2 cut(s)	346, 500
AspLEI	GCGC	5 cut(s)	787, 845, 934, 1548, 1798
AspS9I	GGNCC	5 cut(s)	387, 1441, 1442, 1555, 1720
AsuC2I	CCSGG	1 cut(s)	1071
AsuHPI	GGTGA	3 cut(s)	187, 301, 1750
AvaI	CYCGRG	2 cut(s)	521, 1039
AvaII	GGWCC	2 cut(s)	387, 1720
BaeGI	GKGCMC	2 cut(s)	1445, 1510
BanI	GGYRCC	3 cut(s)	346, 500, 1507
BanII	GRGCYC	3 cut(s)	200, 893, 1445
BbsI	GAAGAC	3 cut(s)	431, 1052, 1363
Bbv12I	GWGCWC	6 cut(s)	200, 893, 1215, 1400, 1823, 2056
BbvCI	CCTCAGC	3 cut(s)	48, 1749, 1862
BbvI	GCAGC	4 cut(s)	130, 566, 1256, 1566
BceAI	ACGGC	2 cut(s)	1402, 1503
BciT130I	CCWGG	3 cut(s)	617, 1543, 1952
BcnI	CCSGG	1 cut(s)	1071
BcoDI	GTCTC	5 cut(s)	536, 571, 1158, 1160, 1253
BfaI	CTAG	6 cut(s)	318, 509, 1427, 1601, 1688, 1874
BfmI	CTRYAG	1 cut(s)	1170
BfoI	RGCGCY	3 cut(s)	788, 1549, 1799
BfuAI	ACCTGC	1 cut(s)	1708
BglI	GCCNNNNNGGC	1 cut(s)	617
BisI	GCNGC	6 cut(s)	144, 448, 555, 771, 1245, 1580
BlsI	GCNGC	6 cut(s)	145, 449, 556, 772, 1246, 1581
Bme1390I	CCNGG	4 cut(s)	617, 1071, 1543, 1952
Bme18I	GGWCC	2 cut(s)	387, 1720
BmeT110I	CYCGRG	2 cut(s)	521, 1039
BmgBI	CACGTC	1 cut(s)	585
BmgT120I	GGNCC	5 cut(s)	387, 1441, 1442, 1555, 1720
BmiI	GGNNCC	9 cut(s)	96, 348, 388, 502, 610, 1295, 1443, 1509, 1722
BmrFI	CCNGG	4 cut(s)	617, 1071, 1543, 1952
BmrI	ACTGGG	2 cut(s)	1859, 2055
BmsI	GCATC	7 cut(s)	91, 613, 713, 767, 951, 1121, 1792
BmuI	ACTGGG	2 cut(s)	1859, 2055
BoxI	GACNNNNGTC	1 cut(s)	563
BpiI	GAAGAC	3 cut(s)	431, 1052, 1363
BpmI	CTGGAG	1 cut(s)	95
Bpu10I	CCTNAGC	4 cut(s)	48, 1098, 1749, 1862
BpuEI	CTTGAG	1 cut(s)	1229
BpuMI	CCSGG	1 cut(s)	1071
BsaAI	YACGTR	1 cut(s)	2031
BsaBI	GATNNNNATC	1 cut(s)	1592
BsaHI	GRCGYC	1 cut(s)	1358
BsaJI	CCNNGG	7 cut(s)	390, 549, 945, 1192, 1289, 1414, 1620
BsaWI	WCCGGW	2 cut(s)	1361, 1927
BsaXI	ACNNNNNCTCC	4 cut(s)	103, 133, 1285, 1315
Bse118I	RCCGGY	1 cut(s)	409
Bse1I	ACTGG	6 cut(s)	78, 433, 814, 908, 1854, 2050
Bse3DI	GCAATG	3 cut(s)	111, 727, 1017
Bse8I	GATNNNNATC	1 cut(s)	1592
BseAI	TCCGGA	1 cut(s)	1927
BseBI	CCWGG	3 cut(s)	617, 1543, 1952
BseDI	CCNNGG	7 cut(s)	390, 549, 945, 1192, 1289, 1414, 1620
BseJI	GATNNNNATC	1 cut(s)	1592
BseMI	GCAATG	3 cut(s)	111, 727, 1017
BseMII	CTCAG	7 cut(s)	38, 39, 864, 1112, 1740, 1876, 1973
BseNI	ACTGG	6 cut(s)	78, 433, 814, 908, 1854, 2050
BseRI	GAGGAG	4 cut(s)	124, 1193, 1334, 1517
BseSI	GKGCMC	2 cut(s)	1445, 1510
BseXI	GCAGC	4 cut(s)	130, 566, 1256, 1566
BseYI	CCCAGC	2 cut(s)	1000, 1631
BsgI	GTGCAG	1 cut(s)	1809
Bsh1236I	CGCG	1 cut(s)	593
BshFI	GGCC	6 cut(s)	773, 1389, 1443, 1490, 1557, 1599
BshNI	GGYRCC	3 cut(s)	346, 500, 1507
BsiHKAI	GWGCWC	6 cut(s)	200, 893, 1215, 1400, 1823, 2056
BsiHKCI	CYCGRG	2 cut(s)	521, 1039
BsiSI	CCGG	5 cut(s)	410, 1070, 1362, 1799, 1928
BslFI	GGGAC	7 cut(s)	400, 595, 983, 1065, 1517, 1706, 1959
BsmAI	GTCTC	5 cut(s)	536, 571, 1158, 1160, 1253
BsmBI	CGTCTC	2 cut(s)	536, 571
BsmFI	GGGAC	7 cut(s)	400, 595, 983, 1065, 1517, 1706, 1959
BsmI	GAATGC	1 cut(s)	473
BsnI	GGCC	6 cut(s)	773, 1389, 1443, 1490, 1557, 1599
BsoBI	CYCGRG	2 cut(s)	521, 1039
Bsp120I	GGGCCC	1 cut(s)	1441
Bsp1286I	GDGCHC	8 cut(s)	200, 893, 1215, 1400, 1445, 1510, 1823, 2056
Bsp13I	TCCGGA	1 cut(s)	1927
Bsp1407I	TGTACA	1 cut(s)	1301
Bsp143I	GATC	4 cut(s)	367, 847, 1455, 1512
Bsp19I	CCATGG	2 cut(s)	1289, 1620
BspACI	CCGC	5 cut(s)	448, 770, 1022, 1074, 1724
BspANI	GGCC	6 cut(s)	773, 1389, 1443, 1490, 1557, 1599
BspCNI	CTCAG	7 cut(s)	37, 40, 865, 1111, 1741, 1875, 1974
BspEI	TCCGGA	1 cut(s)	1927
BspFNI	CGCG	1 cut(s)	593
BspLI	GGNNCC	9 cut(s)	96, 348, 388, 502, 610, 1295, 1443, 1509, 1722
BspMAI	CTGCAG	1 cut(s)	1174
BspMI	ACCTGC	1 cut(s)	1708
BspPI	GGATC	1 cut(s)	1450
BspQI	GCTCTTC	1 cut(s)	881
BspT107I	GGYRCC	3 cut(s)	346, 500, 1507
BsrBI	CCGCTC	1 cut(s)	770
BsrDI	GCAATG	3 cut(s)	111, 727, 1017
BsrFI	RCCGGY	1 cut(s)	409
BsrGI	TGTACA	1 cut(s)	1301
BsrI	ACTGG	6 cut(s)	78, 433, 814, 908, 1854, 2050
BssAI	RCCGGY	1 cut(s)	409
BssECI	CCNNGG	7 cut(s)	390, 549, 945, 1192, 1289, 1414, 1620
BssMI	GATC	4 cut(s)	367, 847, 1455, 1512
BssNI	GRCGYC	1 cut(s)	1358
BssT1I	CCWWGG	5 cut(s)	549, 1192, 1289, 1414, 1620
Bst2UI	CCWGG	3 cut(s)	617, 1543, 1952
Bst6I	CTCTTC	3 cut(s)	881, 1161, 1505
BstACI	GRCGYC	1 cut(s)	1358
BstAUI	TGTACA	1 cut(s)	1301
BstBAI	YACGTR	1 cut(s)	2031
BstC8I	GCNNGC	5 cut(s)	93, 445, 775, 1492, 2052
BstDEI	CTNAG	9 cut(s)	24, 48, 201, 873, 1098, 1749, 1862, 1982, 2019
BstDSI	CCRYGG	4 cut(s)	390, 945, 1289, 1620
BstFNI	CGCG	1 cut(s)	593
BstH2I	RGCGCY	3 cut(s)	788, 1549, 1799
BstHHI	GCGC	5 cut(s)	787, 845, 934, 1548, 1798
BstKTI	GATC	4 cut(s)	370, 850, 1458, 1515
BstMAI	GTCTC	5 cut(s)	536, 571, 1158, 1160, 1253
BstMBI	GATC	4 cut(s)	367, 847, 1455, 1512
BstNI	CCWGG	3 cut(s)	617, 1543, 1952
BstNSI	RCATGY	2 cut(s)	447, 916
BstPAI	GACNNNNGTC	1 cut(s)	563
BstSCI	CCNGG	4 cut(s)	615, 1069, 1541, 1950
BstSFI	CTRYAG	1 cut(s)	1170
BstSLI	GKGCMC	2 cut(s)	1445, 1510
BstSNI	TACGTA	1 cut(s)	2031
BstUI	CGCG	1 cut(s)	593
BstV1I	GCAGC	4 cut(s)	130, 566, 1256, 1566
BstV2I	GAAGAC	3 cut(s)	431, 1052, 1363
BstX2I	RGATCY	1 cut(s)	1455
BstXI	CCANNNNNNTGG	2 cut(s)	952, 1290
BstYI	RGATCY	1 cut(s)	1455
BsuRI	GGCC	6 cut(s)	773, 1389, 1443, 1490, 1557, 1599
BtgI	CCRYGG	4 cut(s)	390, 945, 1289, 1620
BtrI	CACGTC	1 cut(s)	585
BtsI	GCAGTG	2 cut(s)	348, 699
BtsIMutI	CAGTG	9 cut(s)	348, 370, 699, 1311, 1604, 1659, 1826, 1839, 1847
BveI	ACCTGC	1 cut(s)	1708
Cac8I	GCNNGC	5 cut(s)	93, 445, 775, 1492, 2052
CfoI	GCGC	5 cut(s)	787, 845, 934, 1548, 1798
Cfr10I	RCCGGY	1 cut(s)	409
Cfr13I	GGNCC	5 cut(s)	387, 1441, 1442, 1555, 1720
CseI	GACGC	4 cut(s)	553, 1347, 1483, 1585
CviAII	CATG	9 cut(s)	444, 538, 825, 913, 1290, 1438, 1621, 1702, 1807
DdeI	CTNAG	9 cut(s)	24, 48, 201, 873, 1098, 1749, 1862, 1982, 2019
DpnI	GATC	4 cut(s)	369, 849, 1457, 1514
DpnII	GATC	4 cut(s)	367, 847, 1455, 1512
EaeI	YGGCCR	2 cut(s)	1387, 1488
Eam1104I	CTCTTC	3 cut(s)	881, 1161, 1505
EarI	CTCTTC	3 cut(s)	881, 1161, 1505
Ecl136II	GAGCTC	2 cut(s)	198, 891
Eco105I	TACGTA	1 cut(s)	2031
Eco130I	CCWWGG	5 cut(s)	549, 1192, 1289, 1414, 1620
Eco24I	GRGCYC	3 cut(s)	200, 893, 1445
Eco47I	GGWCC	2 cut(s)	387, 1720
Eco47III	AGCGCT	1 cut(s)	786
Eco53kI	GAGCTC	2 cut(s)	198, 891
Eco57I	CTGAAG	1 cut(s)	1046
Eco88I	CYCGRG	2 cut(s)	521, 1039
EcoICRI	GAGCTC	2 cut(s)	198, 891
EcoO109I	RGGNCCY	1 cut(s)	1720
EcoRII	CCWGG	3 cut(s)	615, 1541, 1950
EcoT14I	CCWWGG	5 cut(s)	549, 1192, 1289, 1414, 1620
EcoT22I	ATGCAT	1 cut(s)	628
EcoT38I	GRGCYC	3 cut(s)	200, 893, 1445
ErhI	CCWWGG	5 cut(s)	549, 1192, 1289, 1414, 1620
Esp3I	CGTCTC	2 cut(s)	536, 571
FaeI	CATG	9 cut(s)	447, 541, 828, 916, 1293, 1441, 1624, 1705, 1810
FalI	AAGNNNNNCTT	2 cut(s)	878, 910
FaqI	GGGAC	7 cut(s)	400, 595, 983, 1065, 1517, 1706, 1959
FatI	CATG	9 cut(s)	443, 537, 824, 912, 1289, 1437, 1620, 1701, 1806
FauI	CCCGC	2 cut(s)	1067, 1731
FblI	GTMKAC	1 cut(s)	1383
Fnu4HI	GCNGC	6 cut(s)	144, 448, 555, 771, 1245, 1580
FriOI	GRGCYC	3 cut(s)	200, 893, 1445
Fsp4HI	GCNGC	6 cut(s)	144, 448, 555, 771, 1245, 1580
FspBI	CTAG	6 cut(s)	318, 509, 1427, 1601, 1688, 1874
GlaI	GCGC	5 cut(s)	786, 844, 933, 1547, 1797
GluI	GCNGC	6 cut(s)	144, 448, 555, 771, 1245, 1580
GsaI	CCCAGC	2 cut(s)	1004, 1635
GsuI	CTGGAG	1 cut(s)	95
HaeII	RGCGCY	3 cut(s)	788, 1549, 1799
HaeIII	GGCC	6 cut(s)	773, 1389, 1443, 1490, 1557, 1599
HapII	CCGG	5 cut(s)	410, 1070, 1362, 1799, 1928
HgaI	GACGC	4 cut(s)	553, 1347, 1483, 1585
HhaI	GCGC	5 cut(s)	787, 845, 934, 1548, 1798
Hin1I	GRCGYC	1 cut(s)	1358
Hin1II	CATG	9 cut(s)	447, 541, 828, 916, 1293, 1441, 1624, 1705, 1810
Hin6I	GCGC	5 cut(s)	785, 843, 932, 1546, 1796
HinP1I	GCGC	5 cut(s)	785, 843, 932, 1546, 1796
HindIII	AAGCTT	2 cut(s)	1205, 1813
HinfI	GANTC	9 cut(s)	223, 685, 816, 996, 1078, 1253, 1593, 1912, 1924
HpaII	CCGG	5 cut(s)	410, 1070, 1362, 1799, 1928
HphI	GGTGA	3 cut(s)	187, 301, 1750
Hpy166II	GTNNAC	8 cut(s)	178, 327, 394, 514, 1384, 1572, 2005, 2028
Hpy188I	TCNGA	6 cut(s)	995, 1065, 1203, 1258, 1340, 1983
Hpy8I	GTNNAC	8 cut(s)	178, 327, 394, 514, 1384, 1572, 2005, 2028
Hpy99I	CGWCG	1 cut(s)	1579
HpyAV	CCTTC	7 cut(s)	260, 433, 622, 847, 904, 1771, 2032
HpyCH4IV	ACGT	3 cut(s)	529, 584, 2030
HpyF3I	CTNAG	9 cut(s)	24, 48, 201, 873, 1098, 1749, 1862, 1982, 2019
HpySE526I	ACGT	3 cut(s)	529, 584, 2030
Hsp92I	GRCGYC	1 cut(s)	1358
Hsp92II	CATG	9 cut(s)	447, 541, 828, 916, 1293, 1441, 1624, 1705, 1810
HspAI	GCGC	5 cut(s)	785, 843, 932, 1546, 1796
Kpn2I	TCCGGA	1 cut(s)	1927
KpnI	GGTACC	2 cut(s)	350, 504
Kzo9I	GATC	4 cut(s)	367, 847, 1455, 1512
LguI	GCTCTTC	1 cut(s)	881
LmnI	GCTCC	6 cut(s)	100, 608, 896, 1293, 1321, 1530
Lsp1109I	GCAGC	4 cut(s)	130, 566, 1256, 1566
LweI	GCATC	7 cut(s)	91, 613, 713, 767, 951, 1121, 1792
MaeI	CTAG	6 cut(s)	318, 509, 1427, 1601, 1688, 1874
MaeII	ACGT	3 cut(s)	529, 584, 2030
MaeIII	GTNAC	6 cut(s)	184, 1306, 1830, 1876, 1885, 1894
MalI	GATC	4 cut(s)	369, 849, 1457, 1514
MbiI	CCGCTC	1 cut(s)	770
MboI	GATC	4 cut(s)	367, 847, 1455, 1512
MfeI	CAATTG	1 cut(s)	648
MflI	RGATCY	1 cut(s)	1455
MhlI	GDGCHC	8 cut(s)	200, 893, 1215, 1400, 1445, 1510, 1823, 2056
MlyI	GAGTC	4 cut(s)	679, 1005, 1087, 1262
MmeI	TCCRAC	1 cut(s)	1181
Mph1103I	ATGCAT	1 cut(s)	628
MroI	TCCGGA	1 cut(s)	1927
MseI	TTAA	4 cut(s)	281, 719, 1938, 1992
MslI	CAYNNNNRTG	1 cut(s)	1700
MspA1I	CMGCKG	1 cut(s)	1247
MspI	CCGG	5 cut(s)	410, 1070, 1362, 1799, 1928
MspR9I	CCNGG	4 cut(s)	617, 1071, 1543, 1952
MunI	CAATTG	1 cut(s)	648
Mva1269I	GAATGC	1 cut(s)	473
MvaI	CCWGG	3 cut(s)	617, 1543, 1952
MvnI	CGCG	1 cut(s)	593
NciI	CCSGG	1 cut(s)	1071
NcoI	CCATGG	2 cut(s)	1289, 1620
NdeII	GATC	4 cut(s)	367, 847, 1455, 1512
NlaIII	CATG	9 cut(s)	447, 541, 828, 916, 1293, 1441, 1624, 1705, 1810
NlaIV	GGNNCC	9 cut(s)	96, 348, 388, 502, 610, 1295, 1443, 1509, 1722
NmeAIII	GCCGAG	1 cut(s)	513
NmuCI	GTSAC	3 cut(s)	184, 1306, 1830
NsiI	ATGCAT	1 cut(s)	628
NspI	RCATGY	2 cut(s)	447, 916
PaeI	GCATGC	1 cut(s)	447
PaeR7I	CTCGAG	1 cut(s)	521
PciI	ACATGT	1 cut(s)	912
PciSI	GCTCTTC	1 cut(s)	881
PcsI	WCGNNNNNNNCGW	2 cut(s)	387, 590
PctI	GAATGC	1 cut(s)	473
PfeI	GAWTC	5 cut(s)	223, 816, 1593, 1912, 1924
PflMI	CCANNNNNTGG	1 cut(s)	1438
PkrI	GCNGC	6 cut(s)	145, 449, 556, 772, 1246, 1581
PleI	GAGTC	4 cut(s)	679, 1004, 1086, 1261
PpsI	GAGTC	4 cut(s)	679, 1004, 1086, 1261
Ppu21I	YACGTR	1 cut(s)	2031
PpuMI	RGGWCCY	1 cut(s)	1720
PscI	ACATGT	1 cut(s)	912
PshAI	GACNNNNGTC	1 cut(s)	563
PshBI	ATTAAT	1 cut(s)	1992
Psp124BI	GAGCTC	2 cut(s)	200, 893
Psp5II	RGGWCCY	1 cut(s)	1720
Psp6I	CCWGG	3 cut(s)	615, 1541, 1950
PspFI	CCCAGC	2 cut(s)	1000, 1631
PspGI	CCWGG	3 cut(s)	615, 1541, 1950
PspN4I	GGNNCC	9 cut(s)	96, 348, 388, 502, 610, 1295, 1443, 1509, 1722
PspOMI	GGGCCC	1 cut(s)	1441
PspPI	GGNCC	5 cut(s)	387, 1441, 1442, 1555, 1720
PspPPI	RGGWCCY	1 cut(s)	1720
PstI	CTGCAG	1 cut(s)	1174
PsuI	RGATCY	1 cut(s)	1455
PvuII	CAGCTG	1 cut(s)	1247
RseI	CAYNNNNRTG	1 cut(s)	1700
SacI	GAGCTC	2 cut(s)	200, 893
SapI	GCTCTTC	1 cut(s)	881
SaqAI	TTAA	4 cut(s)	281, 719, 1938, 1992
SatI	GCNGC	6 cut(s)	144, 448, 555, 771, 1245, 1580
Sau3AI	GATC	4 cut(s)	367, 847, 1455, 1512
Sau96I	GGNCC	5 cut(s)	387, 1441, 1442, 1555, 1720
SchI	GAGTC	4 cut(s)	679, 1005, 1087, 1262
ScrFI	CCNGG	4 cut(s)	617, 1071, 1543, 1952
SduI	GDGCHC	8 cut(s)	200, 893, 1215, 1400, 1445, 1510, 1823, 2056
SfaNI	GCATC	7 cut(s)	91, 613, 713, 767, 951, 1121, 1792
SfcI	CTRYAG	1 cut(s)	1170
Sfr274I	CTCGAG	1 cut(s)	521
SinI	GGWCC	2 cut(s)	387, 1720
SlaI	CTCGAG	1 cut(s)	521
SmiMI	CAYNNNNRTG	1 cut(s)	1700
SmlI	CTYRAG	2 cut(s)	521, 1208
SmoI	CTYRAG	2 cut(s)	521, 1208
SnaBI	TACGTA	1 cut(s)	2031
SphI	GCATGC	1 cut(s)	447
SsiI	CCGC	5 cut(s)	448, 770, 1022, 1074, 1724
SspMI	CTAG	6 cut(s)	318, 509, 1427, 1601, 1688, 1874
SstI	GAGCTC	2 cut(s)	200, 893
StyD4I	CCNGG	4 cut(s)	615, 1069, 1541, 1950
StyI	CCWWGG	5 cut(s)	549, 1192, 1289, 1414, 1620
TaiI	ACGT	3 cut(s)	532, 587, 2033
TaqI	TCGA	2 cut(s)	5, 522
TaqII	GACCGA	1 cut(s)	203
TatI	WGTACW	4 cut(s)	164, 789, 1301, 1692
TauI	GCSGC	2 cut(s)	450, 773
TfiI	GAWTC	5 cut(s)	223, 816, 1593, 1912, 1924
Tru1I	TTAA	4 cut(s)	281, 719, 1938, 1992
Tru9I	TTAA	4 cut(s)	281, 719, 1938, 1992
TscAI	CASTG	9 cut(s)	348, 370, 706, 1311, 1611, 1666, 1833, 1846, 1854
TseFI	GTSAC	3 cut(s)	184, 1306, 1830
TseI	GCWGC	4 cut(s)	143, 554, 1244, 1579
Tsp45I	GTSAC	3 cut(s)	184, 1306, 1830
TspDTI	ATGAA	6 cut(s)	480, 822, 873, 983, 1723, 1753
TspGWI	ACGGA	4 cut(s)	507, 1321, 1465, 1600
TspRI	CASTG	9 cut(s)	348, 370, 706, 1311, 1611, 1666, 1833, 1846, 1854
Van91I	CCANNNNNTGG	1 cut(s)	1438
VpaK11BI	GGWCC	2 cut(s)	387, 1720
VspI	ATTAAT	1 cut(s)	1992
XapI	RAATTY	2 cut(s)	292, 1137
XceI	RCATGY	2 cut(s)	447, 916
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1618, 1846
XhoI	CTCGAG	1 cut(s)	521
XmiI	GTMKAC	1 cut(s)	1383
XspI	CTAG	6 cut(s)	318, 509, 1427, 1601, 1688, 1874
Zsp2I	ATGCAT	1 cut(s)	628

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.