Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0000603

Physical Location & Seq

Genomic Coordinates Forward (+)

11114911 .. 11117110

Gene Structure 2200 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG130200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGGCTTTGGCGGAAGATGAATATACAAATGATGGCACTGTGGACATACATAAAAACCCTGCTAATAAGAGGAAGACTGGCAATTGGAAGGCATGCCGCTTTATTCTTGGAAATGAATGCTGTGAAAGATTGGCATACTATGGAATGAGTACCAATCTGGTGAACTATCTTCAGAAACAACTCAGCATGGGAAATGCCGCGGCATCAAAGAGTGTCACTAATTGGTCGGGAACTTGCTATGCCACACCACTATTAGGAGCCTTCCTAGCTGATGCATACTTGGGAAGATATTGGACGATTGCCATTTTCTCAATTATATATGCTCTTGGGATGGCATTCTTGTCTCTGACAGCATCTATCAATGGACTAAAGCCATCATGCGACAGCTCTGGTTGCCACGCAACTACATCACAAAAAGCAGTCTGCTTTGTAGCTCTGTACATGATTGCACTTGGTACTGGTGGAATCAAGCCGTGCGTTTCATCTTTCGGTGCTGATCAATTTGATGAAACGGACGATACTGAGAAGGAAAAGAAGAGCTCTTTCTTCAATTGGTTTTACATGTCAATCAATGTTGGTGCACTTATTGCTTCCTCGGTTTTGGTCTATATACAAATGAATGTGGGATGGAACTGGGGTTTTGGGATCCCAGCAGTTGCAATGGTCATAGCAGTTGTGTTCTTTTTCTTTGGTAGTCCATTGTACCGACTTCAGAAACCTGGAGGGAGTCCCCTCACAAGGATTATTCAGGTCATTGTTGCATCCTGCAGGAAATTCAATGTAAAAGTCCCGGATGACAAGTCTCTTCTTTATGAAACAAGTGACGCTGAGAGTAATATCCAAGGAAGCCGCAAGCTTGAGCACACAGACAAGTTAAGGTTCTTTGATAAGGCTGCTGTGGAGGACCTGAAGAGCTTGGAAAACCCATGGAAAGTCTGCACAGTTACTCAAGTAGAGGAGCTCAAGGCCATCATCCGGTTGCTTCCAATATGGGCATCTGGGATAGTCTTTGCTGCAGTTTACAGTCAAATGAGCACAATGTTTGTTTTGCAAGGCAACACAATGGATCAACATATGGGCCCCAAATTCAAGATTCCATCGGCATCTCTCTCCCTCTTTGACACAGTGAGTGTTCTCATCTGGGCTCCTATATATGACCTAGTCATTGTCCCATTTGCAAGAAAGTTCACTGGTCATCCACGAGGTTTCACCCAGCTACAAAGAATGGGCATTGGCCTCCTCATATCCGTGTTTTCCATGGTTGTTGCTGGGATCTTGGAGGTTGTTCGGCTCGGGATTGTGCATAAAAACAATTATTATGACCGCGAATACATCCCCATGTCAATCTTTTGGCAAGTTCCACAGTACTTCCTTATTGGGTGTGCAGAGGTTTTCACATTCATTGGACAGTTAGAATTTTTCTATGACCAGGCACCTGATGCTATGAGAAGCTTGTGCTCTGCACTCTCACTTACAACTATTTCATTGGGAAATTACCTCAGCACTCTGCTTGTTACCATCGTAACTAAAGTTACCACAAGGAATGGGAAGCTTGGTTGGATTCCAGATAACTTGAACAGGGGCCATCTTGACTATTTTTACTGGCTGTTGACCATTCTCAGCGTCATTAACTTCCTGGTGTATCTCCTCATTGCTAAGTGGTATACATACAAGAAAACAGTGGATCGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006807 GO:0006810 GO:0006857 GO:0008150 GO:0008152 GO:0009506 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0015833 GO:0016020 GO:0016043 GO:0016049 GO:0022414 GO:0022857 GO:0030054 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0035672 GO:0035673 GO:0040007 GO:0042886 GO:0042887 GO:0042937 GO:0042938 GO:0042939 GO:0044464 GO:0044706 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051179 GO:0051234 GO:0051704 GO:0055044 GO:0055085 GO:0060560 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PTR2

Protein Analysis

563

Amino Acids

62.97

Weight (kDa)

8.72

Isoelectric Point (pI)

26.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_1	PF07690	45 - 498	5.3e-15	Major Facilitator Superfamily
PTR2	PF00854	97 - 521	2.9e-126	POT family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000603)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54140 AT3G54140 AT5G01180 AT5G01180 AT5G01180
fragaria_vesca	FvH4_3g38120 FvH4_6g11961 FvH4_6g11970 FvH4_6g11970 FvH4_6g11970 FvH4_6g11970 FvH4_7g07580 FvH4_7g07580
malus_domestica	MD03G1076900.v1.1 MD04G1147500.v1.1 MD11G1081100.v1.1 MD11G1081200.v1.1 MD12G1160700.v1.1 MD12G1160900.v1.1
prunus_persica	Prupe.6G061500_v2.0.a1 Prupe.6G271100_v2.0.a1 Prupe.6G271200_v2.0.a1
pyrus_communis	pycom03g06080 pycom11g06920 pycom11g06940 pycom12g15250 pycom12g15270
rosa_chinensis	RchiOBHm_Chr1g0343091 RchiOBHm_Chr3g0463781 RchiOBHm_Chr3g0463791 RchiOBHm_Chr5g0068471 RchiOBHm_Chr5g0068501
rosa_laevigata	RLG00000024756 RLG00000024757 RLG00000029203 RLG00000035978 RLG00000035979
rosa_multiflora	Rmu_co8449979.1_g000001 Rmu_sc0000313.1_g000001 Rmu_sc0003221.1_g000016 Rmu_sc0003221.1_g000025 Rmu_sc0003221.1_g000026 Rmu_sc0004796.1_g000013 Rmu_sc0005087.1_g000011 Rmu_sc0008896.1_g000017 Rmu_sc0010201.1_g000001 Rmu_sc0017585.1_g000005
rosa_roxburghii	Rroxscaffold_1G00012300 Rroxscaffold_1G00012310 Rroxscaffold_1G00013040 Rroxscaffold_1G00013050 Rroxscaffold_4G00313320 Rroxscaffold_6G00416290 Rroxscaffold_6G00416300
rosa_rugosa	Rorug01G0144300.1 Rorug03G0067500 Rorug03G0067600 Rorug03G0067700 Rorug05G0390200 Rorug05G0390300 Rorug05G0390400.1 Rorug05G0390500 Rorug05G0390600 Rorug05G0390700
rosa_samantha	Rh1BG127900 Rh1CG150400 Rh1DG164100 Rh3AG124700 Rh3AG124800 Rh3CG131600 Rh3DG130100 Rh3DG130200 Rh5CG488500 Rh5DG480400 Rh5DG480600
rosa_wichuraiana	Rw1G013410 Rw3G010540 Rw3G010550 Rw5G041900 Rw5G041920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1432
AccI	GTMKAC	1 cut(s)	1664
AccII	CGCG	2 cut(s)	200, 1326
AciI	CCGC	6 cut(s)	11, 97, 198, 200, 850, 1324
AclWI	GGATC	4 cut(s)	640, 653, 1074, 1280
AcsI	RAATTY	3 cut(s)	773, 1085, 1415
AcuI	CTGAAG	3 cut(s)	155, 695, 929
AfaI	GTAC	5 cut(s)	151, 440, 457, 704, 1367
AfiI	CCNNNNNNNGG	3 cut(s)	254, 738, 975
AflIII	ACRYGT	1 cut(s)	561
AgsI	TTSAA	4 cut(s)	550, 778, 1090, 1576
AjnI	CCWGG	3 cut(s)	718, 1428, 1635
Alw21I	GWGCWC	6 cut(s)	542, 583, 864, 963, 1037, 1460
Alw26I	GTCTC	2 cut(s)	348, 807
Alw44I	GTGCAC	1 cut(s)	579
AlwI	GGATC	4 cut(s)	640, 653, 1074, 1280
Ama87I	CYCGRG	1 cut(s)	1292
AoxI	GGCC	4 cut(s)	966, 1078, 1234, 1582
ApaI	GGGCCC	1 cut(s)	1082
ApaLI	GTGCAC	1 cut(s)	579
ApeKI	GCWGC	2 cut(s)	893, 1013
ApoI	RAATTY	3 cut(s)	773, 1085, 1415
AspS9I	GGNCC	4 cut(s)	904, 1078, 1079, 1582
AsuC2I	CCSGG	1 cut(s)	791
AsuHPI	GGTGA	2 cut(s)	172, 1201
AvaI	CYCGRG	1 cut(s)	1292
AvaII	GGWCC	1 cut(s)	904
BaeGI	GKGCMC	2 cut(s)	583, 1082
BamHI	GGATCC	1 cut(s)	645
BanI	GGYRCC	1 cut(s)	1432
BanII	GRGCYC	4 cut(s)	542, 963, 1082, 1147
BauI	CACGAG	1 cut(s)	1200
BbsI	GAAGAC	1 cut(s)	80
Bbv12I	GWGCWC	6 cut(s)	542, 583, 864, 963, 1037, 1460
BbvCI	CCTCAGC	1 cut(s)	1499
BbvI	GCAGC	2 cut(s)	880, 1000
BccI	CCATC	8 cut(s)	26, 325, 382, 621, 977, 1105, 1526, 1593
BceAI	ACGGC	1 cut(s)	457
BciT130I	CCWGG	3 cut(s)	720, 1430, 1637
BclI	TGATCA	1 cut(s)	496
BcnI	CCSGG	1 cut(s)	791
BcoDI	GTCTC	2 cut(s)	348, 807
BfaI	CTAG	2 cut(s)	266, 1160
BfmI	CTRYAG	2 cut(s)	766, 1014
BisI	GCNGC	6 cut(s)	97, 198, 201, 850, 894, 1014
BlsI	GCNGC	6 cut(s)	98, 199, 202, 851, 895, 1015
BmcAI	AGTACT	1 cut(s)	1367
Bme1390I	CCNGG	4 cut(s)	720, 791, 1430, 1637
Bme18I	GGWCC	1 cut(s)	904
BmeT110I	CYCGRG	1 cut(s)	1292
BmgT120I	GGNCC	4 cut(s)	904, 1078, 1079, 1582
BmiI	GGNNCC	7 cut(s)	259, 647, 1080, 1081, 1146, 1434, 1583
BmrFI	CCNGG	4 cut(s)	720, 791, 1430, 1637
BmrI	ACTGGG	1 cut(s)	643
BmsI	GCATC	7 cut(s)	212, 262, 362, 770, 1004, 1112, 1429
BmuI	ACTGGG	1 cut(s)	643
BpiI	GAAGAC	1 cut(s)	80
BpmI	CTGGAG	1 cut(s)	741
Bpu10I	CCTNAGC	1 cut(s)	1499
BpuEI	CTTGAG	3 cut(s)	878, 933, 947
BpuMI	CCSGG	1 cut(s)	791
BsaJI	CCNNGG	5 cut(s)	198, 594, 841, 926, 1257
BsaWI	WCCGGW	1 cut(s)	975
Bsc4I	CCNNNNNNNGG	3 cut(s)	254, 738, 975
Bse1I	ACTGG	5 cut(s)	82, 463, 638, 1195, 1607
Bse3DI	GCAATG	2 cut(s)	666, 1650
BseBI	CCWGG	3 cut(s)	720, 1430, 1637
BseDI	CCNNGG	5 cut(s)	198, 594, 841, 926, 1257
BseGI	GGATG	7 cut(s)	336, 632, 761, 799, 972, 1195, 1332
BseLI	CCNNNNNNNGG	3 cut(s)	254, 738, 975
BseMI	GCAATG	2 cut(s)	666, 1650
BseMII	CTCAG	5 cut(s)	196, 513, 819, 1513, 1633
BseNI	ACTGG	5 cut(s)	82, 463, 638, 1195, 1607
BseRI	GAGGAG	3 cut(s)	971, 1229, 1637
BseSI	GKGCMC	2 cut(s)	583, 1082
BseXI	GCAGC	2 cut(s)	880, 1000
BseYI	CCCAGC	3 cut(s)	649, 1212, 1268
BsgI	GTGCAG	3 cut(s)	922, 1404, 1446
Bsh1236I	CGCG	2 cut(s)	200, 1326
BshFI	GGCC	4 cut(s)	968, 1080, 1236, 1584
BshNI	GGYRCC	1 cut(s)	1432
BsiHKAI	GWGCWC	6 cut(s)	542, 583, 864, 963, 1037, 1460
BsiHKCI	CYCGRG	1 cut(s)	1292
BsiSI	CCGG	2 cut(s)	791, 976
BslFI	GGGAC	3 cut(s)	714, 773, 1154
BslI	CCNNNNNNNGG	3 cut(s)	254, 738, 975
BsmAI	GTCTC	2 cut(s)	348, 807
BsmFI	GGGAC	3 cut(s)	714, 773, 1154
BsmI	GAATGC	2 cut(s)	122, 335
BsnI	GGCC	4 cut(s)	968, 1080, 1236, 1584
BsoBI	CYCGRG	1 cut(s)	1292
Bsp120I	GGGCCC	1 cut(s)	1078
Bsp1286I	GDGCHC	8 cut(s)	542, 583, 864, 963, 1037, 1082, 1147, 1460
Bsp1407I	TGTACA	1 cut(s)	438
Bsp143I	GATC	5 cut(s)	496, 645, 1066, 1272, 1684
Bsp19I	CCATGG	2 cut(s)	926, 1257
BspACI	CCGC	6 cut(s)	11, 97, 198, 200, 850, 1324
BspANI	GGCC	4 cut(s)	968, 1080, 1236, 1584
BspCNI	CTCAG	5 cut(s)	195, 514, 820, 1512, 1632
BspFNI	CGCG	2 cut(s)	200, 1326
BspLI	GGNNCC	7 cut(s)	259, 647, 1080, 1081, 1146, 1434, 1583
BspMAI	CTGCAG	2 cut(s)	770, 1018
BspPI	GGATC	4 cut(s)	640, 653, 1074, 1280
BspQI	GCTCTTC	2 cut(s)	530, 905
BspT107I	GGYRCC	1 cut(s)	1432
BsrDI	GCAATG	2 cut(s)	666, 1650
BsrGI	TGTACA	1 cut(s)	438
BsrI	ACTGG	5 cut(s)	82, 463, 638, 1195, 1607
BssECI	CCNNGG	5 cut(s)	198, 594, 841, 926, 1257
BssMI	GATC	5 cut(s)	496, 645, 1066, 1272, 1684
BssNAI	GTATAC	1 cut(s)	1665
BssSI	CACGAG	1 cut(s)	1200
BssT1I	CCWWGG	3 cut(s)	841, 926, 1257
Bst1107I	GTATAC	1 cut(s)	1665
Bst2BI	CACGAG	1 cut(s)	1200
Bst2UI	CCWGG	3 cut(s)	720, 1430, 1637
Bst4CI	ACNGT	7 cut(s)	40, 943, 1025, 1126, 1365, 1410, 1681
Bst6I	CTCTTC	3 cut(s)	530, 810, 905
BstAPI	GCANNNNNTGC	2 cut(s)	587, 1439
BstAUI	TGTACA	1 cut(s)	438
BstC8I	GCNNGC	2 cut(s)	94, 854
BstDEI	CTNAG	6 cut(s)	182, 522, 828, 1499, 1619, 1656
BstDSI	CCRYGG	3 cut(s)	198, 926, 1257
BstF5I	GGATG	7 cut(s)	336, 632, 761, 799, 972, 1195, 1332
BstFNI	CGCG	2 cut(s)	200, 1326
BstKTI	GATC	5 cut(s)	499, 648, 1069, 1275, 1687
BstMAI	GTCTC	2 cut(s)	348, 807
BstMBI	GATC	5 cut(s)	496, 645, 1066, 1272, 1684
BstMWI	GCNNNNNNNGC	4 cut(s)	266, 393, 587, 1439
BstNI	CCWGG	3 cut(s)	720, 1430, 1637
BstNSI	RCATGY	2 cut(s)	96, 565
BstSCI	CCNGG	4 cut(s)	718, 789, 1428, 1635
BstSFI	CTRYAG	2 cut(s)	766, 1014
BstSLI	GKGCMC	2 cut(s)	583, 1082
BstUI	CGCG	2 cut(s)	200, 1326
BstV1I	GCAGC	2 cut(s)	880, 1000
BstV2I	GAAGAC	1 cut(s)	80
BstX2I	RGATCY	2 cut(s)	645, 1272
BstYI	RGATCY	2 cut(s)	645, 1272
BstZ17I	GTATAC	1 cut(s)	1665
BsuRI	GGCC	4 cut(s)	968, 1080, 1236, 1584
BtgI	CCRYGG	3 cut(s)	198, 926, 1257
BtsCI	GGATG	7 cut(s)	336, 632, 761, 799, 972, 1195, 1332
BtsIMutI	CAGTG	4 cut(s)	36, 1131, 1188, 1686
Cac8I	GCNNGC	2 cut(s)	94, 854
Cfr13I	GGNCC	4 cut(s)	904, 1078, 1079, 1582
Cfr42I	CCGCGG	1 cut(s)	201
CseI	GACGC	2 cut(s)	833, 1612
Csp6I	GTAC	5 cut(s)	150, 439, 456, 703, 1366
CviAII	CATG	8 cut(s)	93, 187, 378, 442, 562, 927, 1258, 1339
CviQI	GTAC	5 cut(s)	150, 439, 456, 703, 1366
DdeI	CTNAG	6 cut(s)	182, 522, 828, 1499, 1619, 1656
DpnI	GATC	5 cut(s)	498, 647, 1068, 1274, 1686
DpnII	GATC	5 cut(s)	496, 645, 1066, 1272, 1684
Eam1104I	CTCTTC	3 cut(s)	530, 810, 905
EarI	CTCTTC	3 cut(s)	530, 810, 905
EciI	GGCGGA	1 cut(s)	26
Ecl136II	GAGCTC	2 cut(s)	540, 961
Eco130I	CCWWGG	3 cut(s)	841, 926, 1257
Eco24I	GRGCYC	4 cut(s)	542, 963, 1082, 1147
Eco47I	GGWCC	1 cut(s)	904
Eco53kI	GAGCTC	2 cut(s)	540, 961
Eco57I	CTGAAG	3 cut(s)	155, 695, 929
Eco88I	CYCGRG	1 cut(s)	1292
EcoICRI	GAGCTC	2 cut(s)	540, 961
EcoO109I	RGGNCCY	2 cut(s)	904, 1079
EcoRII	CCWGG	3 cut(s)	718, 1428, 1635
EcoT14I	CCWWGG	3 cut(s)	841, 926, 1257
EcoT22I	ATGCAT	1 cut(s)	277
EcoT38I	GRGCYC	4 cut(s)	542, 963, 1082, 1147
ErhI	CCWWGG	3 cut(s)	841, 926, 1257
FaeI	CATG	8 cut(s)	96, 190, 381, 445, 565, 930, 1261, 1342
FaqI	GGGAC	3 cut(s)	714, 773, 1154
FatI	CATG	8 cut(s)	92, 186, 377, 441, 561, 926, 1257, 1338
FauNDI	CATATG	1 cut(s)	1074
FbaI	TGATCA	1 cut(s)	496
FblI	GTMKAC	1 cut(s)	1664
Fnu4HI	GCNGC	6 cut(s)	97, 198, 201, 850, 894, 1014
FokI	GGATG	7 cut(s)	343, 639, 748, 806, 959, 1182, 1319
FriOI	GRGCYC	4 cut(s)	542, 963, 1082, 1147
Fsp4HI	GCNGC	6 cut(s)	97, 198, 201, 850, 894, 1014
FspBI	CTAG	2 cut(s)	266, 1160
GluI	GCNGC	6 cut(s)	97, 198, 201, 850, 894, 1014
GsaI	CCCAGC	3 cut(s)	653, 1216, 1272
GsuI	CTGGAG	1 cut(s)	741
HaeIII	GGCC	4 cut(s)	968, 1080, 1236, 1584
HapII	CCGG	2 cut(s)	791, 976
HgaI	GACGC	2 cut(s)	833, 1612
Hin1II	CATG	8 cut(s)	96, 190, 381, 445, 565, 930, 1261, 1342
HincII	GTYRAC	1 cut(s)	1611
HindII	GTYRAC	1 cut(s)	1611
HindIII	AAGCTT	3 cut(s)	854, 1450, 1550
HinfI	GANTC	4 cut(s)	465, 727, 1093, 1561
HpaII	CCGG	2 cut(s)	791, 976
HphI	GGTGA	2 cut(s)	172, 1201
Hpy166II	GTNNAC	7 cut(s)	43, 163, 581, 1021, 1188, 1611, 1665
Hpy188I	TCNGA	3 cut(s)	174, 348, 714
Hpy188III	TCNNGA	5 cut(s)	228, 1090, 1294, 1565, 1589
Hpy8I	GTNNAC	7 cut(s)	43, 163, 581, 1021, 1188, 1611, 1665
HpyAV	CCTTC	3 cut(s)	82, 271, 520
HpyCH4III	ACNGT	7 cut(s)	40, 943, 1025, 1126, 1365, 1410, 1681
HpyF10VI	GCNNNNNNNGC	4 cut(s)	266, 393, 587, 1439
HpyF3I	CTNAG	6 cut(s)	182, 522, 828, 1499, 1619, 1656
Hsp92II	CATG	8 cut(s)	96, 190, 381, 445, 565, 930, 1261, 1342
Ksp22I	TGATCA	1 cut(s)	496
KspI	CCGCGG	1 cut(s)	201
Kzo9I	GATC	5 cut(s)	496, 645, 1066, 1272, 1684
LguI	GCTCTTC	2 cut(s)	530, 905
LmnI	GCTCC	3 cut(s)	257, 958, 1150
Lsp1109I	GCAGC	2 cut(s)	880, 1000
LweI	GCATC	7 cut(s)	212, 262, 362, 770, 1004, 1112, 1429
MaeI	CTAG	2 cut(s)	266, 1160
MaeIII	GTNAC	6 cut(s)	214, 821, 943, 1513, 1522, 1531
MalI	GATC	5 cut(s)	498, 647, 1068, 1274, 1686
MboI	GATC	5 cut(s)	496, 645, 1066, 1272, 1684
MboII	GAAGA	8 cut(s)	26, 85, 161, 297, 538, 547, 797, 922
MfeI	CAATTG	2 cut(s)	82, 550
MflI	RGATCY	2 cut(s)	645, 1272
MhlI	GDGCHC	8 cut(s)	542, 583, 864, 963, 1037, 1082, 1147, 1460
MlyI	GAGTC	1 cut(s)	736
MmeI	TCCRAC	1 cut(s)	1538
Mph1103I	ATGCAT	1 cut(s)	277
MseI	TTAA	2 cut(s)	875, 1629
MslI	CAYNNNNRTG	2 cut(s)	1247, 1337
MspA1I	CMGCKG	1 cut(s)	200
MspI	CCGG	2 cut(s)	791, 976
MspR9I	CCNGG	4 cut(s)	720, 791, 1430, 1637
MunI	CAATTG	2 cut(s)	82, 550
Mva1269I	GAATGC	2 cut(s)	122, 335
MvaI	CCWGG	3 cut(s)	720, 1430, 1637
MvnI	CGCG	2 cut(s)	200, 1326
MwoI	GCNNNNNNNGC	4 cut(s)	266, 393, 587, 1439
NciI	CCSGG	1 cut(s)	791
NcoI	CCATGG	2 cut(s)	926, 1257
NdeI	CATATG	1 cut(s)	1074
NdeII	GATC	5 cut(s)	496, 645, 1066, 1272, 1684
NlaIII	CATG	8 cut(s)	96, 190, 381, 445, 565, 930, 1261, 1342
NlaIV	GGNNCC	7 cut(s)	259, 647, 1080, 1081, 1146, 1434, 1583
NmuCI	GTSAC	2 cut(s)	214, 821
NsiI	ATGCAT	1 cut(s)	277
NspI	RCATGY	2 cut(s)	96, 565
PaeI	GCATGC	1 cut(s)	96
PciI	ACATGT	1 cut(s)	561
PciSI	GCTCTTC	2 cut(s)	530, 905
PctI	GAATGC	2 cut(s)	122, 335
PfeI	GAWTC	3 cut(s)	465, 1093, 1561
PflFI	GACNNNGTC	1 cut(s)	1160
PfoI	TCCNGGA	1 cut(s)	789
PkrI	GCNGC	6 cut(s)	98, 199, 202, 851, 895, 1015
PleI	GAGTC	1 cut(s)	735
PpsI	GAGTC	1 cut(s)	735
PpuMI	RGGWCCY	1 cut(s)	904
PscI	ACATGT	1 cut(s)	561
Psp124BI	GAGCTC	2 cut(s)	542, 963
Psp5II	RGGWCCY	1 cut(s)	904
Psp6I	CCWGG	3 cut(s)	718, 1428, 1635
PspFI	CCCAGC	3 cut(s)	649, 1212, 1268
PspGI	CCWGG	3 cut(s)	718, 1428, 1635
PspN4I	GGNNCC	7 cut(s)	259, 647, 1080, 1081, 1146, 1434, 1583
PspOMI	GGGCCC	1 cut(s)	1078
PspPI	GGNCC	4 cut(s)	904, 1078, 1079, 1582
PspPPI	RGGWCCY	1 cut(s)	904
PstI	CTGCAG	2 cut(s)	770, 1018
PsuI	RGATCY	2 cut(s)	645, 1272
PsyI	GACNNNGTC	1 cut(s)	1160
RsaI	GTAC	5 cut(s)	151, 440, 457, 704, 1367
RsaNI	GTAC	5 cut(s)	150, 439, 456, 703, 1366
RseI	CAYNNNNRTG	2 cut(s)	1247, 1337
SacI	GAGCTC	2 cut(s)	542, 963
SacII	CCGCGG	1 cut(s)	201
SapI	GCTCTTC	2 cut(s)	530, 905
SaqAI	TTAA	2 cut(s)	875, 1629
SatI	GCNGC	6 cut(s)	97, 198, 201, 850, 894, 1014
Sau3AI	GATC	5 cut(s)	496, 645, 1066, 1272, 1684
Sau96I	GGNCC	4 cut(s)	904, 1078, 1079, 1582
SbfI	CCTGCAGG	1 cut(s)	770
ScaI	AGTACT	1 cut(s)	1367
SchI	GAGTC	1 cut(s)	736
ScrFI	CCNGG	4 cut(s)	720, 791, 1430, 1637
SdaI	CCTGCAGG	1 cut(s)	770
SduI	GDGCHC	8 cut(s)	542, 583, 864, 963, 1037, 1082, 1147, 1460
SfaNI	GCATC	7 cut(s)	212, 262, 362, 770, 1004, 1112, 1429
SfcI	CTRYAG	2 cut(s)	766, 1014
Sfr303I	CCGCGG	1 cut(s)	201
SgrBI	CCGCGG	1 cut(s)	201
SinI	GGWCC	1 cut(s)	904
SmiMI	CAYNNNNRTG	2 cut(s)	1247, 1337
SmlI	CTYRAG	3 cut(s)	857, 948, 962
SmoI	CTYRAG	3 cut(s)	857, 948, 962
SphI	GCATGC	1 cut(s)	96
Sse8387I	CCTGCAGG	1 cut(s)	770
SsiI	CCGC	6 cut(s)	11, 97, 198, 200, 850, 1324
SspMI	CTAG	2 cut(s)	266, 1160
SstI	GAGCTC	2 cut(s)	542, 963
StyD4I	CCNGG	4 cut(s)	718, 789, 1428, 1635
StyI	CCWWGG	3 cut(s)	841, 926, 1257
TaaI	ACNGT	7 cut(s)	40, 943, 1025, 1126, 1365, 1410, 1681
TatI	WGTACW	2 cut(s)	438, 1365
TauI	GCSGC	4 cut(s)	99, 200, 203, 852
TfiI	GAWTC	3 cut(s)	465, 1093, 1561
Tru1I	TTAA	2 cut(s)	875, 1629
Tru9I	TTAA	2 cut(s)	875, 1629
TscAI	CASTG	4 cut(s)	43, 1131, 1195, 1686
TseFI	GTSAC	2 cut(s)	214, 821
TseI	GCWGC	2 cut(s)	893, 1013
Tsp45I	GTSAC	2 cut(s)	214, 821
TspDTI	ATGAA	8 cut(s)	33, 129, 471, 522, 632, 828, 1390, 1473
TspGWI	ACGGA	2 cut(s)	527, 1237
TspRI	CASTG	4 cut(s)	43, 1131, 1195, 1686
Tth111I	GACNNNGTC	1 cut(s)	1160
VneI	GTGCAC	1 cut(s)	579
VpaK11BI	GGWCC	1 cut(s)	904
XapI	RAATTY	3 cut(s)	773, 1085, 1415
XceI	RCATGY	2 cut(s)	96, 565
XmiI	GTMKAC	1 cut(s)	1664
XspI	CTAG	2 cut(s)	266, 1160
ZrmI	AGTACT	1 cut(s)	1367
Zsp2I	ATGCAT	1 cut(s)	277

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.