Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008896.1

Orthogroup ID

OG0000603

Physical Location & Seq

Genomic Coordinates Forward (+)

110088 .. 114136

Gene Structure 4049 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008896.1_g000017.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2327 bp

atggcagaagattatgtatacttacaaggtgggagagttggaggacccattgcagaagatgatttatacaccaaagatgggacagtggattacagagggaacccggctaccaaaaatgtcacaggaacctggaaggcatgccctttcattctagggaatgaattgtgtgaaagattggcattctatgggatgagtgcaaatctggtgctttatttcaagaatcatctacaccagagcagtgctgctgcagctaaaagtatctcaaattggactggaacatgctacctcacccctttgattggtgcatttctggctgatgcttatttgggaagatacaagaccattgcctctttcacaatcatctatgtcattgggatggctctcttgacaatgtcaacatcagtcccaggcctgaaacctacctgtgtttcgaaagatgactgctatgcaactgctggacaatctgcagcctgctttgtggcattgtacctaatagctttggcaactggtgggattaagccttgtgtctcagcttatggagcagatcagtttgacgaggatgatgagattgaaaagaagcacaagagttctttcttcaactggttctattttgtcatcaacatcggtgctttgattgctagttcattactggtatggatacaaaccaacaagggttgggaatggggtttcggcataccagcagttgccatggcaattgctgtagtgagtttcttttcgggtactaggatatacaggaaccagaacccaggaggtagcccgataacccgaatagttcaggtggtggtggcatctgtgagaaaatacaaggtggaagtacctgaagacaagtccgttttgtatgagaccgcagatgcagagtctgctatcaaaggaagccgcaagcttgaacacacaaatgagtttaggttttttgacaaagcagctgtggagctaccaacagacaacataaagggcttcacagacccgtggagactttgtacagttacccaagtagaggagctaaaatcaatcataaggttgcttcctgtttgggccactggtattatctttgctgcggtcttcagtcagatgagcaacttctttgtgttgcaaggcagccttatggatcttcatgttggctcctctagctttgagattccagcagcctccctctccgtatttgatacccttagtgttattgtttggatcccaatctttgatcgactcattgtcccatttactagaaaattcacaggtcacaagaatggcataacttcactccagaggatgggaattggtctcttcatttccatattctccatgatatgtgctgcaattctagaatatatcaggctccaaaaggttcgagagcacaactattatgaccttgaccatatgcccatgtctgttttttggcaagtgcctcagtatttcctaataggggctgcagaagtcttcacagtcattggacaggtcgactttttctacgatcaagcacctgatgccatgagaagcttgtcttctgctctcgcactctccactgttgcattaggaaactacttcaactctctgcttgtcaccattgtttccaacgtgacgacaaagaacaataagccgggatggataccagacaatttgaactacggtcacctcgattatttcttctattttctcgctgtgctgagtgttctgaacctcggagcttttatgttaatttccaagtgggaccccatttcatccctctcagttttccaccaagtttggcccaaacacaatccctatctatggaactcaatcatcagagcacttatccataatgggcttcactcaaaagcactcgaccattacaatgaaatgcatggaatgaatgttcagcctgataggtttacctttccttcagtgatcaatgcctgtgctgggttgtgtgatctggaaatgggtatggttgtgcatcaccgtattctggagaagggtttcggctcagacttgtatatatgtaatgcattgatagacatgtacgctagatttggtgaacttggtaatgcccgccatgtgttcgatgaaatgcttcaaagggatattgtgtcgtggaatagtctgatttcggggtacagttcaaatggacattgggaggaagctttggaaatgtttcgtagattaagaattgatgggttgttaccggattgtttttcgatatctagtgttctgcctgcatgtggaggcttggttgatgttaaagagggtcagttagttcatgctatggttgaaaagattggagtgcatgcagatgttttagtaagtaatgggcttctctcaatgtacttcaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006807 GO:0006810 GO:0006857 GO:0008150 GO:0008152 GO:0009506 GO:0015833 GO:0016020 GO:0022857 GO:0030054 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0042937 GO:0042938 GO:0042939 GO:0044464 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PTR2

Protein Analysis

775

Amino Acids

86.28

Weight (kDa)

6.03

Isoelectric Point (pI)

31.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000603)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54140 AT3G54140 AT5G01180 AT5G01180 AT5G01180
fragaria_vesca	FvH4_3g38120 FvH4_6g11961 FvH4_6g11970 FvH4_6g11970 FvH4_6g11970 FvH4_6g11970 FvH4_7g07580 FvH4_7g07580
malus_domestica	MD03G1076900.v1.1 MD04G1147500.v1.1 MD11G1081100.v1.1 MD11G1081200.v1.1 MD12G1160700.v1.1 MD12G1160900.v1.1
prunus_persica	Prupe.6G061500_v2.0.a1 Prupe.6G271100_v2.0.a1 Prupe.6G271200_v2.0.a1
pyrus_communis	pycom03g06080 pycom11g06920 pycom11g06940 pycom12g15250 pycom12g15270
rosa_chinensis	RchiOBHm_Chr1g0343091 RchiOBHm_Chr3g0463781 RchiOBHm_Chr3g0463791 RchiOBHm_Chr5g0068471 RchiOBHm_Chr5g0068501
rosa_laevigata	RLG00000024756 RLG00000024757 RLG00000029203 RLG00000035978 RLG00000035979
rosa_multiflora	Rmu_co8449979.1_g000001 Rmu_sc0000313.1_g000001 Rmu_sc0003221.1_g000016 Rmu_sc0003221.1_g000025 Rmu_sc0003221.1_g000026 Rmu_sc0004796.1_g000013 Rmu_sc0005087.1_g000011 Rmu_sc0008896.1_g000017 Rmu_sc0010201.1_g000001 Rmu_sc0017585.1_g000005
rosa_roxburghii	Rroxscaffold_1G00012300 Rroxscaffold_1G00012310 Rroxscaffold_1G00013040 Rroxscaffold_1G00013050 Rroxscaffold_4G00313320 Rroxscaffold_6G00416290 Rroxscaffold_6G00416300
rosa_rugosa	Rorug01G0144300.1 Rorug03G0067500 Rorug03G0067600 Rorug03G0067700 Rorug05G0390200 Rorug05G0390300 Rorug05G0390400.1 Rorug05G0390500 Rorug05G0390600 Rorug05G0390700
rosa_samantha	Rh1BG127900 Rh1CG150400 Rh1DG164100 Rh3AG124700 Rh3AG124800 Rh3CG131600 Rh3DG130100 Rh3DG130200 Rh5CG488500 Rh5DG480400 Rh5DG480600
rosa_wichuraiana	Rw1G013410 Rw3G010540 Rw3G010550 Rw5G041900 Rw5G041920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1288
AccI	GTMKAC	2 cut(s)	18, 1476
AciI	CCGC	4 cut(s)	867, 898, 1076, 2047
AclWI	GGATC	3 cut(s)	1134, 1201, 1214
AcsI	RAATTY	1 cut(s)	1247
AcuI	CTGAAG	3 cut(s)	861, 1066, 1881
AfaI	GTAC	7 cut(s)	488, 742, 837, 1000, 2018, 2111, 2321
AfiI	CCNNNNNNNGG	9 cut(s)	78, 299, 1015, 1288, 1441, 1785, 1917, 1963, 2216
AflIII	ACRYGT	1 cut(s)	2013
AhdI	GACNNNNNGTC	1 cut(s)	1229
AjnI	CCWGG	3 cut(s)	128, 406, 766
AloI	GAACNNNNNNTCC	2 cut(s)	1854, 1886
Alw21I	GWGCWC	2 cut(s)	1374, 1807
Alw26I	GTCTC	4 cut(s)	532, 857, 985, 1304
AlwI	GGATC	3 cut(s)	1134, 1201, 1214
AlwNI	CAGNNNCTG	1 cut(s)	881
AoxI	GGCC	3 cut(s)	409, 1053, 1763
ApoI	RAATTY	1 cut(s)	1247
Asp700I	GAANNNNTTC	3 cut(s)	1973, 2067, 2148
AspS9I	GGNCC	4 cut(s)	44, 1053, 1726, 1764
AsuC2I	CCSGG	2 cut(s)	104, 1617
AsuHPI	GGTGA	5 cut(s)	280, 1570, 1640, 1946, 2042
AsuII	TTCGAA	1 cut(s)	431
AvaII	GGWCC	2 cut(s)	44, 1726
BamHI	GGATCC	1 cut(s)	1206
BbsI	GAAGAC	4 cut(s)	849, 1072, 1447, 1512
Bbv12I	GWGCWC	2 cut(s)	1374, 1807
BccI	CCATC	5 cut(s)	71, 370, 1282, 1614, 2162
BciT130I	CCWGG	3 cut(s)	130, 408, 768
BciVI	GTATCC	2 cut(s)	651, 1617
BclI	TGATCA	1 cut(s)	1902
BcnI	CCSGG	2 cut(s)	104, 1617
BcoDI	GTCTC	4 cut(s)	532, 857, 985, 1304
BfaI	CTAG	8 cut(s)	152, 639, 744, 1146, 1242, 1340, 2022, 2199
BfmI	CTRYAG	4 cut(s)	246, 465, 720, 1446
BfuI	GTATCC	2 cut(s)	651, 1617
Bme1390I	CCNGG	5 cut(s)	104, 130, 408, 768, 1617
Bme18I	GGWCC	2 cut(s)	44, 1726
BmeRI	GACNNNNNGTC	1 cut(s)	1229
BmgT120I	GGNCC	4 cut(s)	44, 1053, 1726, 1764
BmiI	GGNNCC	9 cut(s)	46, 101, 127, 758, 1141, 1208, 1355, 1727, 1728
BmrFI	CCNGG	5 cut(s)	104, 130, 408, 768, 1617
BmsI	GCATC	5 cut(s)	307, 818, 862, 1492, 1960
BpiI	GAAGAC	4 cut(s)	849, 1072, 1447, 1512
BpmI	CTGGAG	2 cut(s)	1265, 1985
Bpu14I	TTCGAA	1 cut(s)	431
BpuMI	CCSGG	2 cut(s)	104, 1617
BsaBI	GATNNNNATC	1 cut(s)	1211
BsaI	GGTCTC	2 cut(s)	857, 1304
BsaJI	CCNNGG	5 cut(s)	406, 708, 766, 986, 1696
BsaWI	WCCGGW	1 cut(s)	2179
BsaXI	ACNNNNNCTCC	4 cut(s)	982, 1012, 2211, 2241
Bsc4I	CCNNNNNNNGG	9 cut(s)	78, 299, 1015, 1288, 1441, 1785, 1917, 1963, 2216
Bse1I	ACTGG	5 cut(s)	277, 511, 605, 654, 1063
Bse3DI	GCAATG	2 cut(s)	48, 342
Bse8I	GATNNNNATC	1 cut(s)	1211
BseBI	CCWGG	3 cut(s)	130, 408, 768
BseDI	CCNNGG	5 cut(s)	406, 708, 766, 986, 1696
BseGI	GGATG	6 cut(s)	195, 381, 565, 1293, 1625, 1736
BseJI	GATNNNNATC	1 cut(s)	1211
BseLI	CCNNNNNNNGG	9 cut(s)	78, 299, 1015, 1288, 1441, 1785, 1917, 1963, 2216
BseMI	GCAATG	2 cut(s)	48, 342
BseMII	CTCAG	5 cut(s)	543, 1439, 1673, 1758, 1995
BseNI	ACTGG	5 cut(s)	277, 511, 605, 654, 1063
BseRI	GAGGAG	2 cut(s)	1031, 1132
BseYI	CCCAGC	1 cut(s)	1916
BshFI	GGCC	3 cut(s)	411, 1055, 1765
BsiHKAI	GWGCWC	2 cut(s)	1374, 1807
BsiSI	CCGG	3 cut(s)	104, 1616, 2180
BslFI	GGGAC	4 cut(s)	94, 389, 1217, 1739
BslI	CCNNNNNNNGG	9 cut(s)	78, 299, 1015, 1288, 1441, 1785, 1917, 1963, 2216
BsmAI	GTCTC	4 cut(s)	532, 857, 985, 1304
BsmFI	GGGAC	4 cut(s)	94, 389, 1217, 1739
BsmI	GAATGC	1 cut(s)	179
BsnI	GGCC	3 cut(s)	411, 1055, 1765
Bso31I	GGTCTC	2 cut(s)	857, 1304
Bsp119I	TTCGAA	1 cut(s)	431
Bsp1286I	GDGCHC	2 cut(s)	1374, 1807
Bsp1407I	TGTACA	1 cut(s)	998
Bsp143I	GATC	7 cut(s)	544, 1126, 1206, 1219, 1489, 1902, 1927
Bsp19I	CCATGG	1 cut(s)	708
BspACI	CCGC	4 cut(s)	867, 898, 1076, 2047
BspANI	GGCC	3 cut(s)	411, 1055, 1765
BspCNI	CTCAG	5 cut(s)	542, 1438, 1674, 1757, 1994
BspLI	GGNNCC	9 cut(s)	46, 101, 127, 758, 1141, 1208, 1355, 1727, 1728
BspMAI	CTGCAG	3 cut(s)	250, 469, 1450
BspPI	GGATC	3 cut(s)	1134, 1201, 1214
BspT104I	TTCGAA	1 cut(s)	431
BspTNI	GGTCTC	2 cut(s)	857, 1304
BsrDI	GCAATG	2 cut(s)	48, 342
BsrGI	TGTACA	1 cut(s)	998
BsrI	ACTGG	5 cut(s)	277, 511, 605, 654, 1063
BssECI	CCNNGG	5 cut(s)	406, 708, 766, 986, 1696
BssMI	GATC	7 cut(s)	544, 1126, 1206, 1219, 1489, 1902, 1927
BssNAI	GTATAC	1 cut(s)	19
BssT1I	CCWWGG	1 cut(s)	708
Bst1107I	GTATAC	1 cut(s)	19
Bst2UI	CCWGG	3 cut(s)	130, 408, 768
Bst4CI	ACNGT	7 cut(s)	85, 1003, 1462, 1543, 1646, 1958, 2114
Bst6I	CTCTTC	1 cut(s)	1307
BstAPI	GCANNNNNTGC	2 cut(s)	881, 1502
BstAUI	TGTACA	1 cut(s)	998
BstBI	TTCGAA	1 cut(s)	431
BstC8I	GCNNGC	6 cut(s)	139, 472, 902, 2047, 2211, 2283
BstDEI	CTNAG	6 cut(s)	529, 1190, 1425, 1682, 1744, 1981
BstDSI	CCRYGG	2 cut(s)	708, 986
BstEII	GGTNACC	1 cut(s)	1646
BstF5I	GGATG	6 cut(s)	195, 381, 565, 1293, 1625, 1736
BstKTI	GATC	7 cut(s)	547, 1129, 1209, 1222, 1492, 1905, 1930
BstMAI	GTCTC	4 cut(s)	532, 857, 985, 1304
BstMBI	GATC	7 cut(s)	544, 1126, 1206, 1219, 1489, 1902, 1927
BstMWI	GCNNNNNNNGC	7 cut(s)	248, 311, 539, 635, 881, 1146, 1502
BstNI	CCWGG	3 cut(s)	130, 408, 768
BstNSI	RCATGY	5 cut(s)	141, 282, 2017, 2217, 2285
BstPI	GGTNACC	1 cut(s)	1646
BstSCI	CCNGG	5 cut(s)	102, 128, 406, 766, 1615
BstSFI	CTRYAG	4 cut(s)	246, 465, 720, 1446
BstV2I	GAAGAC	4 cut(s)	849, 1072, 1447, 1512
BstX2I	RGATCY	2 cut(s)	1126, 1206
BstYI	RGATCY	2 cut(s)	1126, 1206
BstZ17I	GTATAC	1 cut(s)	19
BsuI	GTATCC	2 cut(s)	651, 1617
BsuRI	GGCC	3 cut(s)	411, 1055, 1765
BtgI	CCRYGG	2 cut(s)	708, 986
BtsCI	GGATG	6 cut(s)	195, 381, 565, 1293, 1625, 1736
BtsI	GCAGTG	1 cut(s)	244
BtsIMutI	CAGTG	5 cut(s)	90, 244, 1056, 1539, 1905
Cac8I	GCNNGC	6 cut(s)	139, 472, 902, 2047, 2211, 2283
CaiI	CAGNNNCTG	1 cut(s)	881
Cfr13I	GGNCC	4 cut(s)	44, 1053, 1726, 1764
Csp6I	GTAC	7 cut(s)	487, 741, 836, 999, 2017, 2110, 2320
CspCI	CAANNNNNGTGG	2 cut(s)	1742, 1777
CviQI	GTAC	7 cut(s)	487, 741, 836, 999, 2017, 2110, 2320
DdeI	CTNAG	6 cut(s)	529, 1190, 1425, 1682, 1744, 1981
DpnI	GATC	7 cut(s)	546, 1128, 1208, 1221, 1491, 1904, 1929
DpnII	GATC	7 cut(s)	544, 1126, 1206, 1219, 1489, 1902, 1927
DriI	GACNNNNNGTC	1 cut(s)	1229
Eam1104I	CTCTTC	1 cut(s)	1307
Eam1105I	GACNNNNNGTC	1 cut(s)	1229
EarI	CTCTTC	1 cut(s)	1307
Eco130I	CCWWGG	1 cut(s)	708
Eco147I	AGGCCT	1 cut(s)	411
Eco31I	GGTCTC	2 cut(s)	857, 1304
Eco32I	GATATC	1 cut(s)	2196
Eco47I	GGWCC	2 cut(s)	44, 1726
Eco57I	CTGAAG	3 cut(s)	861, 1066, 1881
Eco91I	GGTNACC	1 cut(s)	1646
EcoO109I	RGGNCCY	2 cut(s)	44, 1726
EcoO65I	GGTNACC	1 cut(s)	1646
EcoRII	CCWGG	3 cut(s)	128, 406, 766
EcoRV	GATATC	1 cut(s)	2196
EcoT14I	CCWWGG	1 cut(s)	708
EcoT22I	ATGCAT	2 cut(s)	1860, 2005
ErhI	CCWWGG	1 cut(s)	708
FalI	AAGNNNNNCTT	4 cut(s)	1104, 1136, 1504, 1536
FaqI	GGGAC	4 cut(s)	94, 389, 1217, 1739
FauI	CCCGC	1 cut(s)	2054
FauNDI	CATATG	1 cut(s)	1395
FbaI	TGATCA	1 cut(s)	1902
FblI	GTMKAC	2 cut(s)	18, 1476
FokI	GGATG	6 cut(s)	202, 388, 572, 1300, 1632, 1723
FspBI	CTAG	8 cut(s)	152, 639, 744, 1146, 1242, 1340, 2022, 2199
GsaI	CCCAGC	1 cut(s)	1920
GsuI	CTGGAG	2 cut(s)	1265, 1985
HaeIII	GGCC	3 cut(s)	411, 1055, 1765
HapII	CCGG	3 cut(s)	104, 1616, 2180
HincII	GTYRAC	2 cut(s)	396, 1477
HindII	GTYRAC	2 cut(s)	396, 1477
HindIII	AAGCTT	3 cut(s)	902, 1513, 2136
HinfI	GANTC	4 cut(s)	220, 878, 1156, 1224
HpaII	CCGG	3 cut(s)	104, 1616, 2180
HphI	GGTGA	5 cut(s)	280, 1570, 1640, 1946, 2042
Hpy166II	GTNNAC	5 cut(s)	19, 396, 1477, 1887, 2033
Hpy188I	TCNGA	6 cut(s)	1089, 1692, 1700, 1802, 1984, 2100
Hpy188III	TCNNGA	7 cut(s)	217, 385, 1282, 1340, 1367, 1931, 1964
Hpy8I	GTNNAC	5 cut(s)	19, 396, 1477, 1887, 2033
HpyAV	CCTTC	3 cut(s)	127, 1905, 1963
HpyCH4III	ACNGT	7 cut(s)	85, 1003, 1462, 1543, 1646, 1958, 2114
HpyCH4IV	ACGT	1 cut(s)	1593
HpyF10VI	GCNNNNNNNGC	7 cut(s)	248, 311, 539, 635, 881, 1146, 1502
HpyF3I	CTNAG	6 cut(s)	529, 1190, 1425, 1682, 1744, 1981
HpySE526I	ACGT	1 cut(s)	1593
KflI	GGGWCCC	1 cut(s)	1726
Ksp22I	TGATCA	1 cut(s)	1902
Kzo9I	GATC	7 cut(s)	544, 1126, 1206, 1219, 1489, 1902, 1927
LmnI	GCTCC	6 cut(s)	539, 949, 1018, 1145, 1359, 1700
LweI	GCATC	5 cut(s)	307, 818, 862, 1492, 1960
MaeI	CTAG	8 cut(s)	152, 639, 744, 1146, 1242, 1340, 2022, 2199
MaeII	ACGT	1 cut(s)	1593
MaeIII	GTNAC	7 cut(s)	118, 1003, 1256, 1576, 1594, 1646, 2175
MalI	GATC	7 cut(s)	546, 1128, 1208, 1221, 1491, 1904, 1929
MboI	GATC	7 cut(s)	544, 1126, 1206, 1219, 1489, 1902, 1927
MfeI	CAATTG	1 cut(s)	714
MflI	RGATCY	2 cut(s)	1126, 1206
MhlI	GDGCHC	2 cut(s)	1374, 1807
MluCI	AATT	9 cut(s)	161, 265, 714, 1247, 1293, 1335, 1633, 1713, 2163
MlyI	GAGTC	2 cut(s)	887, 1218
MmeI	TCCRAC	2 cut(s)	19, 1614
Mph1103I	ATGCAT	2 cut(s)	1860, 2005
MroXI	GAANNNNTTC	3 cut(s)	1973, 2067, 2148
MseI	TTAA	4 cut(s)	516, 1712, 2159, 2235
MslI	CAYNNNNRTG	5 cut(s)	374, 915, 1263, 1848, 2286
MspA1I	CMGCKG	1 cut(s)	944
MspI	CCGG	3 cut(s)	104, 1616, 2180
MspR9I	CCNGG	5 cut(s)	104, 130, 408, 768, 1617
MunI	CAATTG	1 cut(s)	714
Mva1269I	GAATGC	1 cut(s)	179
MvaI	CCWGG	3 cut(s)	130, 408, 768
MwoI	GCNNNNNNNGC	7 cut(s)	248, 311, 539, 635, 881, 1146, 1502
NciI	CCSGG	2 cut(s)	104, 1617
NcoI	CCATGG	1 cut(s)	708
NdeI	CATATG	1 cut(s)	1395
NdeII	GATC	7 cut(s)	544, 1126, 1206, 1219, 1489, 1902, 1927
NlaIV	GGNNCC	9 cut(s)	46, 101, 127, 758, 1141, 1208, 1355, 1727, 1728
NmuCI	GTSAC	5 cut(s)	118, 1256, 1576, 1594, 1646
NsiI	ATGCAT	2 cut(s)	1860, 2005
NspI	RCATGY	5 cut(s)	141, 282, 2017, 2217, 2285
NspV	TTCGAA	1 cut(s)	431
PaeI	GCATGC	2 cut(s)	141, 2285
PceI	AGGCCT	1 cut(s)	411
PciI	ACATGT	1 cut(s)	2013
PcsI	WCGNNNNNNNCGW	1 cut(s)	1650
PctI	GAATGC	1 cut(s)	179
PdmI	GAANNNNTTC	3 cut(s)	1973, 2067, 2148
PfeI	GAWTC	2 cut(s)	220, 1156
PflFI	GACNNNGTC	1 cut(s)	391
PflMI	CCANNNNNTGG	1 cut(s)	1288
PleI	GAGTC	2 cut(s)	886, 1218
PpsI	GAGTC	2 cut(s)	886, 1218
PpuMI	RGGWCCY	2 cut(s)	44, 1726
PscI	ACATGT	1 cut(s)	2013
Psp5II	RGGWCCY	2 cut(s)	44, 1726
Psp6I	CCWGG	3 cut(s)	128, 406, 766
PspEI	GGTNACC	1 cut(s)	1646
PspFI	CCCAGC	1 cut(s)	1916
PspGI	CCWGG	3 cut(s)	128, 406, 766
PspN4I	GGNNCC	9 cut(s)	46, 101, 127, 758, 1141, 1208, 1355, 1727, 1728
PspPI	GGNCC	4 cut(s)	44, 1053, 1726, 1764
PspPPI	RGGWCCY	2 cut(s)	44, 1726
PstI	CTGCAG	3 cut(s)	250, 469, 1450
PstNI	CAGNNNCTG	1 cut(s)	881
PsuI	RGATCY	2 cut(s)	1126, 1206
PsyI	GACNNNGTC	1 cut(s)	391
PvuII	CAGCTG	1 cut(s)	944
RsaI	GTAC	7 cut(s)	488, 742, 837, 1000, 2018, 2111, 2321
RsaNI	GTAC	7 cut(s)	487, 741, 836, 999, 2017, 2110, 2320
RseI	CAYNNNNRTG	5 cut(s)	374, 915, 1263, 1848, 2286
SalI	GTCGAC	1 cut(s)	1475
SaqAI	TTAA	4 cut(s)	516, 1712, 2159, 2235
Sau3AI	GATC	7 cut(s)	544, 1126, 1206, 1219, 1489, 1902, 1927
Sau96I	GGNCC	4 cut(s)	44, 1053, 1726, 1764
SchI	GAGTC	2 cut(s)	887, 1218
ScrFI	CCNGG	5 cut(s)	104, 130, 408, 768, 1617
SduI	GDGCHC	2 cut(s)	1374, 1807
SfaNI	GCATC	5 cut(s)	307, 818, 862, 1492, 1960
SfcI	CTRYAG	4 cut(s)	246, 465, 720, 1446
SfuI	TTCGAA	1 cut(s)	431
SinI	GGWCC	2 cut(s)	44, 1726
SmiMI	CAYNNNNRTG	5 cut(s)	374, 915, 1263, 1848, 2286
SphI	GCATGC	2 cut(s)	141, 2285
Sse9I	AATT	9 cut(s)	161, 265, 714, 1247, 1293, 1335, 1633, 1713, 2163
SseBI	AGGCCT	1 cut(s)	411
SsiI	CCGC	4 cut(s)	867, 898, 1076, 2047
SspMI	CTAG	8 cut(s)	152, 639, 744, 1146, 1242, 1340, 2022, 2199
StuI	AGGCCT	1 cut(s)	411
StyD4I	CCNGG	5 cut(s)	102, 128, 406, 766, 1615
StyI	CCWWGG	1 cut(s)	708
TaaI	ACNGT	7 cut(s)	85, 1003, 1462, 1543, 1646, 1958, 2114
TaiI	ACGT	1 cut(s)	1596
TaqI	TCGA	8 cut(s)	431, 1222, 1366, 1476, 1653, 1839, 2058, 2192
TasI	AATT	9 cut(s)	161, 265, 714, 1247, 1293, 1335, 1633, 1713, 2163
TatI	WGTACW	2 cut(s)	998, 2319
TauI	GCSGC	1 cut(s)	900
TfiI	GAWTC	2 cut(s)	220, 1156
Tru1I	TTAA	4 cut(s)	516, 1712, 2159, 2235
Tru9I	TTAA	4 cut(s)	516, 1712, 2159, 2235
TscAI	CASTG	5 cut(s)	90, 244, 1063, 1546, 1905
TseFI	GTSAC	5 cut(s)	118, 1256, 1576, 1594, 1646
Tsp45I	GTSAC	5 cut(s)	118, 1256, 1576, 1594, 1646
TspGWI	ACGGA	2 cut(s)	841, 1165
TspRI	CASTG	5 cut(s)	90, 244, 1063, 1546, 1905
Tth111I	GACNNNGTC	1 cut(s)	391
Van91I	CCANNNNNTGG	1 cut(s)	1288
VpaK11BI	GGWCC	2 cut(s)	44, 1726
XapI	RAATTY	1 cut(s)	1247
XbaI	TCTAGA	1 cut(s)	1339
XceI	RCATGY	5 cut(s)	141, 282, 2017, 2217, 2285
XmiI	GTMKAC	2 cut(s)	18, 1476
XmnI	GAANNNNTTC	3 cut(s)	1973, 2067, 2148
XspI	CTAG	8 cut(s)	152, 639, 744, 1146, 1242, 1340, 2022, 2199
Zsp2I	ATGCAT	2 cut(s)	1860, 2005

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.