Protein NRT1 PTR FAMILY
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ABC_trans_N | PF14510 | 115 - 163 | 1.8e-08 | ABC-transporter N-terminal |
| ABC_tran | PF00005 | 189 - 370 | 1.8e-15 | ABC transporter |
| ABC2_membrane_7 | PF19055 | 404 - 455 | 9.9e-06 | ABC-2 type transporter |
| ABC2_membrane | PF01061 | 525 - 737 | 6.3e-47 | ABC-2 type transporter |
| PDR_assoc | PF08370 | 748 - 807 | 1.7e-26 | Plant PDR ABC transporter associated |
| ABC_tran | PF00005 | 881 - 1033 | 1.1e-19 | ABC transporter |
| ABC2_membrane | PF01061 | 1178 - 1392 | 1.5e-52 | ABC-2 type transporter |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 528 |
| Acc16I | TGCGCA | 1 cut(s) | 285 |
| Acc36I | ACCTGC | 1 cut(s) | 872 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 899 |
| AccBSI | CCGCTC | 3 cut(s) | 196, 3277, 3734 |
| AccI | GTMKAC | 1 cut(s) | 92 |
| AccII | CGCG | 1 cut(s) | 119 |
| AccIII | TCCGGA | 1 cut(s) | 812 |
| AclI | AACGTT | 1 cut(s) | 3399 |
| AclWI | GGATC | 6 cut(s) | 303, 634, 684, 890, 1928, 1952 |
| AcoI | YGGCCR | 4 cut(s) | 709, 1474, 3843, 4015 |
| AcuI | CTGAAG | 2 cut(s) | 288, 2325 |
| AcvI | CACGTG | 1 cut(s) | 1289 |
| AfaI | GTAC | 8 cut(s) | 732, 1229, 1631, 2300, 3136, 3590, 3630, 4346 |
| AfeI | AGCGCT | 1 cut(s) | 2337 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 151, 195, 629, 899, 2267, 2451, 3098, 3482, 3733 |
| AflII | CTTAAG | 2 cut(s) | 1687, 4241 |
| AflIII | ACRYGT | 2 cut(s) | 126, 3663 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2137 |
| AjiI | CACGTC | 1 cut(s) | 127 |
| AjnI | CCWGG | 8 cut(s) | 898, 939, 1386, 1705, 2668, 2888, 2998, 3481 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1062, 1094 |
| AleI | CACNNNNGTG | 1 cut(s) | 929 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1826, 1858 |
| Alw21I | GWGCWC | 5 cut(s) | 62, 177, 472, 1575, 3473 |
| Alw26I | GTCTC | 7 cut(s) | 1156, 1217, 1705, 1760, 2170, 3285, 3845 |
| AlwI | GGATC | 6 cut(s) | 303, 634, 684, 890, 1928, 1952 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 899, 1439 |
| Ama87I | CYCGRG | 2 cut(s) | 1301, 2811 |
| Aor13HI | TCCGGA | 1 cut(s) | 812 |
| Aor51HI | AGCGCT | 1 cut(s) | 2337 |
| AseI | ATTAAT | 1 cut(s) | 2202 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 745, 3811, 4067 |
| AspA2I | CCTAGG | 2 cut(s) | 823, 2104 |
| AspLEI | GCGC | 3 cut(s) | 121, 286, 2338 |
| AsuC2I | CCSGG | 3 cut(s) | 624, 3315, 4014 |
| AsuII | TTCGAA | 2 cut(s) | 3207, 3915 |
| AvaI | CYCGRG | 2 cut(s) | 1301, 2811 |
| AvaII | GGWCC | 7 cut(s) | 617, 1082, 1384, 2231, 3263, 3493, 4306 |
| AvrII | CCTAGG | 2 cut(s) | 823, 2104 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 993, 1026 |
| BalI | TGGCCA | 2 cut(s) | 1476, 3845 |
| BanII | GRGCYC | 3 cut(s) | 62, 177, 1575 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 4337 |
| BbrPI | CACGTG | 1 cut(s) | 1289 |
| BbsI | GAAGAC | 2 cut(s) | 33, 2612 |
| Bbv12I | GWGCWC | 5 cut(s) | 62, 177, 472, 1575, 3473 |
| BceAI | ACGGC | 4 cut(s) | 24, 1496, 3352, 3611 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3401, 3435 |
| BciT130I | CCWGG | 8 cut(s) | 900, 941, 1388, 1707, 2670, 2890, 3000, 3483 |
| BciVI | GTATCC | 1 cut(s) | 2777 |
| BclI | TGATCA | 1 cut(s) | 954 |
| BcnI | CCSGG | 3 cut(s) | 624, 3315, 4014 |
| BcoDI | GTCTC | 7 cut(s) | 1156, 1217, 1705, 1760, 2170, 3285, 3845 |
| BfaI | CTAG | 9 cut(s) | 668, 824, 851, 864, 1962, 2105, 3111, 3192, 4089 |
| BfmI | CTRYAG | 2 cut(s) | 3048, 3378 |
| BfoI | RGCGCY | 1 cut(s) | 2339 |
| BfrI | CTTAAG | 2 cut(s) | 1687, 4241 |
| BfuAI | ACCTGC | 1 cut(s) | 872 |
| BfuI | GTATCC | 1 cut(s) | 2777 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1661 |
| BglII | AGATCT | 2 cut(s) | 3451, 4231 |
| BlnI | CCTAGG | 2 cut(s) | 823, 2104 |
| Bme18I | GGWCC | 7 cut(s) | 617, 1082, 1384, 2231, 3263, 3493, 4306 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2137 |
| BmeT110I | CYCGRG | 2 cut(s) | 1301, 2811 |
| BmgBI | CACGTC | 1 cut(s) | 127 |
| BmiI | GGNNCC | 3 cut(s) | 1604, 3487, 4307 |
| BmrI | ACTGGG | 2 cut(s) | 699, 4135 |
| BmsI | GCATC | 8 cut(s) | 295, 405, 439, 868, 898, 1825, 3097, 4175 |
| BmuI | ACTGGG | 2 cut(s) | 699, 4135 |
| BoxI | GACNNNNGTC | 1 cut(s) | 98 |
| BpiI | GAAGAC | 2 cut(s) | 33, 2612 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3356, 3388 |
| BpmI | CTGGAG | 3 cut(s) | 1086, 3595, 4119 |
| Bpu10I | CCTNAGC | 2 cut(s) | 371, 3837 |
| Bpu14I | TTCGAA | 2 cut(s) | 3207, 3915 |
| BpuEI | CTTGAG | 5 cut(s) | 161, 314, 956, 1360, 2995 |
| BpuMI | CCSGG | 3 cut(s) | 624, 3315, 4014 |
| Bsa29I | ATCGAT | 1 cut(s) | 399 |
| BsaAI | YACGTR | 1 cut(s) | 1289 |
| BsaBI | GATNNNNATC | 3 cut(s) | 675, 1655, 1919 |
| BsaI | GGTCTC | 1 cut(s) | 3285 |
| BsaWI | WCCGGW | 4 cut(s) | 812, 1037, 4073, 4182 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 164, 194, 1702, 1732, 3234, 3264, 4083, 4113 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 151, 195, 629, 899, 2267, 2451, 3098, 3482, 3733 |
| Bse118I | RCCGGY | 1 cut(s) | 151 |
| Bse3DI | GCAATG | 8 cut(s) | 21, 256, 641, 1749, 1800, 2031, 2373, 3042 |
| Bse8I | GATNNNNATC | 3 cut(s) | 675, 1655, 1919 |
| BseAI | TCCGGA | 1 cut(s) | 812 |
| BseBI | CCWGG | 8 cut(s) | 900, 941, 1388, 1707, 2670, 2890, 3000, 3483 |
| BseCI | ATCGAT | 1 cut(s) | 399 |
| BseJI | GATNNNNATC | 3 cut(s) | 675, 1655, 1919 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 151, 195, 629, 899, 2267, 2451, 3098, 3482, 3733 |
| BseMI | GCAATG | 8 cut(s) | 21, 256, 641, 1749, 1800, 2031, 2373, 3042 |
| BseMII | CTCAG | 7 cut(s) | 385, 749, 1212, 2270, 2793, 3420, 3851 |
| BseYI | CCCAGC | 1 cut(s) | 517 |
| BsgI | GTGCAG | 2 cut(s) | 1200, 3160 |
| Bsh1236I | CGCG | 1 cut(s) | 119 |
| Bsh1285I | CGRYCG | 1 cut(s) | 92 |
| BshVI | ATCGAT | 1 cut(s) | 399 |
| BsiEI | CGRYCG | 1 cut(s) | 92 |
| BsiHKAI | GWGCWC | 5 cut(s) | 62, 177, 472, 1575, 3473 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1301, 2811 |
| BsiWI | CGTACG | 1 cut(s) | 1227 |
| BslFI | GGGAC | 1 cut(s) | 534 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 151, 195, 629, 899, 2267, 2451, 3098, 3482, 3733 |
| BsmAI | GTCTC | 7 cut(s) | 1156, 1217, 1705, 1760, 2170, 3285, 3845 |
| BsmBI | CGTCTC | 2 cut(s) | 1217, 3845 |
| BsmFI | GGGAC | 1 cut(s) | 534 |
| BsmI | GAATGC | 3 cut(s) | 1454, 2660, 3745 |
| Bso31I | GGTCTC | 1 cut(s) | 3285 |
| BsoBI | CYCGRG | 2 cut(s) | 1301, 2811 |
| Bsp119I | TTCGAA | 2 cut(s) | 3207, 3915 |
| Bsp1286I | GDGCHC | 5 cut(s) | 62, 177, 472, 1575, 3473 |
| Bsp13I | TCCGGA | 1 cut(s) | 812 |
| Bsp1407I | TGTACA | 2 cut(s) | 1629, 2298 |
| BspCNI | CTCAG | 7 cut(s) | 384, 748, 1213, 2269, 2792, 3421, 3850 |
| BspDI | ATCGAT | 1 cut(s) | 399 |
| BspEI | TCCGGA | 1 cut(s) | 812 |
| BspFNI | CGCG | 1 cut(s) | 119 |
| BspHI | TCATGA | 1 cut(s) | 4050 |
| BspLI | GGNNCC | 3 cut(s) | 1604, 3487, 4307 |
| BspMAI | CTGCAG | 1 cut(s) | 3382 |
| BspMI | ACCTGC | 1 cut(s) | 872 |
| BspPI | GGATC | 6 cut(s) | 303, 634, 684, 890, 1928, 1952 |
| BspQI | GCTCTTC | 1 cut(s) | 1580 |
| BspT104I | TTCGAA | 2 cut(s) | 3207, 3915 |
| BspTI | CTTAAG | 2 cut(s) | 1687, 4241 |
| BspTNI | GGTCTC | 1 cut(s) | 3285 |
| BsrBI | CCGCTC | 3 cut(s) | 196, 3277, 3734 |
| BsrDI | GCAATG | 8 cut(s) | 21, 256, 641, 1749, 1800, 2031, 2373, 3042 |
| BsrFI | RCCGGY | 1 cut(s) | 151 |
| BsrGI | TGTACA | 2 cut(s) | 1629, 2298 |
| BssAI | RCCGGY | 1 cut(s) | 151 |
| BssT1I | CCWWGG | 6 cut(s) | 823, 2104, 2401, 2611, 3489, 3727 |
| Bst2UI | CCWGG | 8 cut(s) | 900, 941, 1388, 1707, 2670, 2890, 3000, 3483 |
| Bst6I | CTCTTC | 6 cut(s) | 159, 751, 1580, 2027, 2616, 4319 |
| BstAFI | CTTAAG | 2 cut(s) | 1687, 4241 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1589, 3546 |
| BstAUI | TGTACA | 2 cut(s) | 1629, 2298 |
| BstBAI | YACGTR | 1 cut(s) | 1289 |
| BstBI | TTCGAA | 2 cut(s) | 3207, 3915 |
| BstC8I | GCNNGC | 8 cut(s) | 62, 86, 761, 1215, 1585, 1791, 2595, 3547 |
| BstEII | GGTNACC | 2 cut(s) | 1879, 4178 |
| BstFNI | CGCG | 1 cut(s) | 119 |
| BstH2I | RGCGCY | 1 cut(s) | 2339 |
| BstHHI | GCGC | 3 cut(s) | 121, 286, 2338 |
| BstMAI | GTCTC | 7 cut(s) | 1156, 1217, 1705, 1760, 2170, 3285, 3845 |
| BstMCI | CGRYCG | 1 cut(s) | 92 |
| BstNI | CCWGG | 8 cut(s) | 900, 941, 1388, 1707, 2670, 2890, 3000, 3483 |
| BstNSI | RCATGY | 3 cut(s) | 232, 1523, 1587 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 98 |
| BstPI | GGTNACC | 2 cut(s) | 1879, 4178 |
| BstSFI | CTRYAG | 2 cut(s) | 3048, 3378 |
| BstUI | CGCG | 1 cut(s) | 119 |
| BstV2I | GAAGAC | 2 cut(s) | 33, 2612 |
| BstX2I | RGATCY | 4 cut(s) | 676, 895, 3451, 4231 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 483, 931, 1484, 4143 |
| BstYI | RGATCY | 4 cut(s) | 676, 895, 3451, 4231 |
| Bsu15I | ATCGAT | 1 cut(s) | 399 |
| BsuI | GTATCC | 1 cut(s) | 2777 |
| BsuTUI | ATCGAT | 1 cut(s) | 399 |
| BtgZI | GCGATG | 2 cut(s) | 3607, 4069 |
| BtrI | CACGTC | 1 cut(s) | 127 |
| BtsI | GCAGTG | 2 cut(s) | 2084, 2679 |
| BtsIMutI | CAGTG | 6 cut(s) | 1821, 1905, 2084, 2301, 2679, 3562 |
| BveI | ACCTGC | 1 cut(s) | 872 |
| Cac8I | GCNNGC | 8 cut(s) | 62, 86, 761, 1215, 1585, 1791, 2595, 3547 |
| CaiI | CAGNNNCTG | 2 cut(s) | 899, 1439 |
| CciI | TCATGA | 1 cut(s) | 4050 |
| CfoI | GCGC | 3 cut(s) | 121, 286, 2338 |
| Cfr10I | RCCGGY | 1 cut(s) | 151 |
| ClaI | ATCGAT | 1 cut(s) | 399 |
| CseI | GACGC | 1 cut(s) | 130 |
| Csp6I | GTAC | 8 cut(s) | 731, 1228, 1630, 2299, 3135, 3589, 3629, 4345 |
| CviQI | GTAC | 8 cut(s) | 731, 1228, 1630, 2299, 3135, 3589, 3629, 4345 |
| DraI | TTTAAA | 2 cut(s) | 1825, 3922 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 528 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2137 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 528 |
| EaeI | YGGCCR | 4 cut(s) | 709, 1474, 3843, 4015 |
| Eam1104I | CTCTTC | 6 cut(s) | 159, 751, 1580, 2027, 2616, 4319 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2137 |
| EarI | CTCTTC | 6 cut(s) | 159, 751, 1580, 2027, 2616, 4319 |
| Ecl136II | GAGCTC | 3 cut(s) | 60, 175, 1573 |
| Eco130I | CCWWGG | 6 cut(s) | 823, 2104, 2401, 2611, 3489, 3727 |
| Eco147I | AGGCCT | 1 cut(s) | 2295 |
| Eco24I | GRGCYC | 3 cut(s) | 62, 177, 1575 |
| Eco31I | GGTCTC | 1 cut(s) | 3285 |
| Eco32I | GATATC | 1 cut(s) | 4198 |
| Eco47I | GGWCC | 7 cut(s) | 617, 1082, 1384, 2231, 3263, 3493, 4306 |
| Eco47III | AGCGCT | 1 cut(s) | 2337 |
| Eco53kI | GAGCTC | 3 cut(s) | 60, 175, 1573 |
| Eco57I | CTGAAG | 2 cut(s) | 288, 2325 |
| Eco72I | CACGTG | 1 cut(s) | 1289 |
| Eco88I | CYCGRG | 2 cut(s) | 1301, 2811 |
| Eco91I | GGTNACC | 2 cut(s) | 1879, 4178 |
| EcoICRI | GAGCTC | 3 cut(s) | 60, 175, 1573 |
| EcoO109I | RGGNCCY | 2 cut(s) | 3493, 4306 |
| EcoO65I | GGTNACC | 2 cut(s) | 1879, 4178 |
| EcoRI | GAATTC | 4 cut(s) | 487, 1887, 2673, 3580 |
| EcoRII | CCWGG | 8 cut(s) | 898, 939, 1386, 1705, 2668, 2888, 2998, 3481 |
| EcoRV | GATATC | 1 cut(s) | 4198 |
| EcoT14I | CCWWGG | 6 cut(s) | 823, 2104, 2401, 2611, 3489, 3727 |
| EcoT22I | ATGCAT | 2 cut(s) | 913, 3832 |
| EcoT38I | GRGCYC | 3 cut(s) | 62, 177, 1575 |
| ErhI | CCWWGG | 6 cut(s) | 823, 2104, 2401, 2611, 3489, 3727 |
| Esp3I | CGTCTC | 2 cut(s) | 1217, 3845 |
| FaqI | GGGAC | 1 cut(s) | 534 |
| FauI | CCCGC | 2 cut(s) | 13, 3727 |
| FauNDI | CATATG | 1 cut(s) | 2854 |
| FbaI | TGATCA | 1 cut(s) | 954 |
| FblI | GTMKAC | 1 cut(s) | 92 |
| FriOI | GRGCYC | 3 cut(s) | 62, 177, 1575 |
| FspBI | CTAG | 9 cut(s) | 668, 824, 851, 864, 1962, 2105, 3111, 3192, 4089 |
| FspI | TGCGCA | 1 cut(s) | 285 |
| GlaI | GCGC | 3 cut(s) | 120, 285, 2337 |
| GsaI | CCCAGC | 1 cut(s) | 521 |
| GsuI | CTGGAG | 3 cut(s) | 1086, 3595, 4119 |
| HaeII | RGCGCY | 1 cut(s) | 2339 |
| HgaI | GACGC | 1 cut(s) | 130 |
| HhaI | GCGC | 3 cut(s) | 121, 286, 2338 |
| Hin6I | GCGC | 3 cut(s) | 119, 284, 2336 |
| HinP1I | GCGC | 3 cut(s) | 119, 284, 2336 |
| HincII | GTYRAC | 4 cut(s) | 93, 277, 2914, 3691 |
| HindII | GTYRAC | 4 cut(s) | 93, 277, 2914, 3691 |
| HindIII | AAGCTT | 2 cut(s) | 3210, 3523 |
| HinfI | GANTC | 7 cut(s) | 423, 552, 1323, 1907, 2138, 2435, 2870 |
| HpaI | GTTAAC | 1 cut(s) | 3691 |
| Hpy166II | GTNNAC | 9 cut(s) | 93, 277, 1043, 1630, 2301, 2575, 2831, 2914, 3691 |
| Hpy8I | GTNNAC | 9 cut(s) | 93, 277, 1043, 1630, 2301, 2575, 2831, 2914, 3691 |
| Hpy99I | CGWCG | 2 cut(s) | 97, 3155 |
| HspAI | GCGC | 3 cut(s) | 119, 284, 2336 |
| Kpn2I | TCCGGA | 1 cut(s) | 812 |
| Ksp22I | TGATCA | 1 cut(s) | 954 |
| KspAI | GTTAAC | 1 cut(s) | 3691 |
| LguI | GCTCTTC | 1 cut(s) | 1580 |
| LweI | GCATC | 8 cut(s) | 295, 405, 439, 868, 898, 1825, 3097, 4175 |
| MaeI | CTAG | 9 cut(s) | 668, 824, 851, 864, 1962, 2105, 3111, 3192, 4089 |
| MaeIII | GTNAC | 9 cut(s) | 685, 697, 1057, 1369, 1429, 1780, 1879, 2857, 4178 |
| MbiI | CCGCTC | 3 cut(s) | 196, 3277, 3734 |
| MfeI | CAATTG | 4 cut(s) | 2070, 2193, 2459, 4032 |
| MflI | RGATCY | 4 cut(s) | 676, 895, 3451, 4231 |
| MhlI | GDGCHC | 5 cut(s) | 62, 177, 472, 1575, 3473 |
| MlsI | TGGCCA | 2 cut(s) | 1476, 3845 |
| MluNI | TGGCCA | 2 cut(s) | 1476, 3845 |
| MlyI | GAGTC | 2 cut(s) | 561, 2147 |
| MmeI | TCCRAC | 7 cut(s) | 500, 811, 1060, 1104, 1884, 2311, 2971 |
| Mox20I | TGGCCA | 2 cut(s) | 1476, 3845 |
| Mph1103I | ATGCAT | 2 cut(s) | 913, 3832 |
| MroI | TCCGGA | 1 cut(s) | 812 |
| MroXI | GAANNNNTTC | 3 cut(s) | 745, 3811, 4067 |
| MscI | TGGCCA | 2 cut(s) | 1476, 3845 |
| MslI | CAYNNNNRTG | 4 cut(s) | 777, 929, 1877, 3128 |
| Msp20I | TGGCCA | 2 cut(s) | 1476, 3845 |
| MspA1I | CMGCKG | 2 cut(s) | 136, 3119 |
| MspCI | CTTAAG | 2 cut(s) | 1687, 4241 |
| MunI | CAATTG | 4 cut(s) | 2070, 2193, 2459, 4032 |
| Mva1269I | GAATGC | 3 cut(s) | 1454, 2660, 3745 |
| MvaI | CCWGG | 8 cut(s) | 900, 941, 1388, 1707, 2670, 2890, 3000, 3483 |
| MvnI | CGCG | 1 cut(s) | 119 |
| NciI | CCSGG | 3 cut(s) | 624, 3315, 4014 |
| NdeI | CATATG | 1 cut(s) | 2854 |
| NlaIV | GGNNCC | 3 cut(s) | 1604, 3487, 4307 |
| NmuCI | GTSAC | 7 cut(s) | 697, 1057, 1369, 1429, 1780, 1879, 4178 |
| NsbI | TGCGCA | 1 cut(s) | 285 |
| NsiI | ATGCAT | 2 cut(s) | 913, 3832 |
| NspI | RCATGY | 3 cut(s) | 232, 1523, 1587 |
| NspV | TTCGAA | 2 cut(s) | 3207, 3915 |
| OliI | CACNNNNGTG | 1 cut(s) | 929 |
| PaeI | GCATGC | 1 cut(s) | 1587 |
| PaeR7I | CTCGAG | 1 cut(s) | 1301 |
| PagI | TCATGA | 1 cut(s) | 4050 |
| PceI | AGGCCT | 1 cut(s) | 2295 |
| PciSI | GCTCTTC | 1 cut(s) | 1580 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 123 |
| PctI | GAATGC | 3 cut(s) | 1454, 2660, 3745 |
| PdmI | GAANNNNTTC | 3 cut(s) | 745, 3811, 4067 |
| PfeI | GAWTC | 5 cut(s) | 423, 1323, 1907, 2435, 2870 |
| Pfl23II | CGTACG | 1 cut(s) | 1227 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 899 |
| PfoI | TCCNGGA | 3 cut(s) | 622, 2998, 3313 |
| PleI | GAGTC | 2 cut(s) | 560, 2146 |
| PmaCI | CACGTG | 1 cut(s) | 1289 |
| PmlI | CACGTG | 1 cut(s) | 1289 |
| PpsI | GAGTC | 2 cut(s) | 560, 2146 |
| Ppu21I | YACGTR | 1 cut(s) | 1289 |
| PpuMI | RGGWCCY | 2 cut(s) | 3493, 4306 |
| PshAI | GACNNNNGTC | 1 cut(s) | 98 |
| PshBI | ATTAAT | 1 cut(s) | 2202 |
| Psp124BI | GAGCTC | 3 cut(s) | 62, 177, 1575 |
| Psp1406I | AACGTT | 1 cut(s) | 3399 |
| Psp5II | RGGWCCY | 2 cut(s) | 3493, 4306 |
| Psp6I | CCWGG | 8 cut(s) | 898, 939, 1386, 1705, 2668, 2888, 2998, 3481 |
| PspCI | CACGTG | 1 cut(s) | 1289 |
| PspEI | GGTNACC | 2 cut(s) | 1879, 4178 |
| PspFI | CCCAGC | 1 cut(s) | 517 |
| PspGI | CCWGG | 8 cut(s) | 898, 939, 1386, 1705, 2668, 2888, 2998, 3481 |
| PspLI | CGTACG | 1 cut(s) | 1227 |
| PspN4I | GGNNCC | 3 cut(s) | 1604, 3487, 4307 |
| PspPPI | RGGWCCY | 2 cut(s) | 3493, 4306 |
| PspXI | VCTCGAGB | 1 cut(s) | 1301 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1403, 1435 |
| PstI | CTGCAG | 1 cut(s) | 3382 |
| PstNI | CAGNNNCTG | 2 cut(s) | 899, 1439 |
| PsuI | RGATCY | 4 cut(s) | 676, 895, 3451, 4231 |
| PvuII | CAGCTG | 1 cut(s) | 3119 |
| RsaI | GTAC | 8 cut(s) | 732, 1229, 1631, 2300, 3136, 3590, 3630, 4346 |
| RsaNI | GTAC | 8 cut(s) | 731, 1228, 1630, 2299, 3135, 3589, 3629, 4345 |
| RseI | CAYNNNNRTG | 4 cut(s) | 777, 929, 1877, 3128 |
| SacI | GAGCTC | 3 cut(s) | 62, 177, 1575 |
| SalI | GTCGAC | 1 cut(s) | 91 |
| SapI | GCTCTTC | 1 cut(s) | 1580 |
| SchI | GAGTC | 2 cut(s) | 561, 2147 |
| SduI | GDGCHC | 5 cut(s) | 62, 177, 472, 1575, 3473 |
| SfaNI | GCATC | 8 cut(s) | 295, 405, 439, 868, 898, 1825, 3097, 4175 |
| SfcI | CTRYAG | 2 cut(s) | 3048, 3378 |
| Sfr274I | CTCGAG | 1 cut(s) | 1301 |
| SfuI | TTCGAA | 2 cut(s) | 3207, 3915 |
| SinI | GGWCC | 7 cut(s) | 617, 1082, 1384, 2231, 3263, 3493, 4306 |
| SlaI | CTCGAG | 1 cut(s) | 1301 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 777, 929, 1877, 3128 |
| SmlI | CTYRAG | 8 cut(s) | 176, 329, 971, 1301, 1375, 1687, 2974, 4241 |
| SmoI | CTYRAG | 8 cut(s) | 176, 329, 971, 1301, 1375, 1687, 2974, 4241 |
| SphI | GCATGC | 1 cut(s) | 1587 |
| SseBI | AGGCCT | 1 cut(s) | 2295 |
| SspI | AATATT | 2 cut(s) | 2312, 3299 |
| SspMI | CTAG | 9 cut(s) | 668, 824, 851, 864, 1962, 2105, 3111, 3192, 4089 |
| SstI | GAGCTC | 3 cut(s) | 62, 177, 1575 |
| StuI | AGGCCT | 1 cut(s) | 2295 |
| StyI | CCWWGG | 6 cut(s) | 823, 2104, 2401, 2611, 3489, 3727 |
| TatI | WGTACW | 3 cut(s) | 1629, 2298, 3588 |
| TauI | GCSGC | 3 cut(s) | 14, 188, 711 |
| TfiI | GAWTC | 5 cut(s) | 423, 1323, 1907, 2435, 2870 |
| TscAI | CASTG | 6 cut(s) | 1821, 1905, 2091, 2308, 2686, 3569 |
| TseFI | GTSAC | 7 cut(s) | 697, 1057, 1369, 1429, 1780, 1879, 4178 |
| Tsp45I | GTSAC | 7 cut(s) | 697, 1057, 1369, 1429, 1780, 1879, 4178 |
| TspGWI | ACGGA | 1 cut(s) | 2015 |
| TspRI | CASTG | 6 cut(s) | 1821, 1905, 2091, 2308, 2686, 3569 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 899 |
| Vha464I | CTTAAG | 2 cut(s) | 1687, 4241 |
| VpaK11BI | GGWCC | 7 cut(s) | 617, 1082, 1384, 2231, 3263, 3493, 4306 |
| VspI | ATTAAT | 1 cut(s) | 2202 |
| XbaI | TCTAGA | 1 cut(s) | 863 |
| XceI | RCATGY | 3 cut(s) | 232, 1523, 1587 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 931, 3079 |
| XhoI | CTCGAG | 1 cut(s) | 1301 |
| XmaJI | CCTAGG | 2 cut(s) | 823, 2104 |
| XmiI | GTMKAC | 1 cut(s) | 92 |
| XmnI | GAANNNNTTC | 3 cut(s) | 745, 3811, 4067 |
| XspI | CTAG | 9 cut(s) | 668, 824, 851, 864, 1962, 2105, 3111, 3192, 4089 |
| Zsp2I | ATGCAT | 2 cut(s) | 913, 3832 |