Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000603

Physical Location & Seq

Genomic Coordinates Forward (+)

11087365 .. 11090405

Gene Structure 3041 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ43009

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGGTGGGTTTTTTCAAACTTGCTCTGTATCGCTCTAGAATAACCCTGAATCAGAGTGCTTGCTTTTCCATTCCCTTTTTTTGTAAACTCTGCAAGCGCAATCAATGTGACTCTCCGGTTTTAAACAGCAAGCAAAACAAGGCCTGGAAGATGGCTTTGGTGGAAGATGAATATACAAATGACGGCACTGTGGACATACATAAAAACCCTGCTAATAAGAGGAAGACTGGCAATTGGAAGGCATGCCGCTTTATTCTTGGAAATGAATGCTGTGAAAGATTGGCATACTATGGAATGAGTACCAATCTGGTGAACTATCTTCAGAAACAACTCAGCATGGGAAATGCCGCGGCATCAAAGAGTGTCACTAATTGGTCGGGAACTTGCTATGCCACGCCACTGTTAGGAGCCTTCCTAGCTGATGCATACTTGGGAAGATATTGGACGATTGCCATTTTCTCAATTATTTATGCTCTTGGGATGGCATTCTTGTCTCTGACAGCATCTATCAATGGACTAAAGCCATCATGCGACAGCTCTGGTTGCCACGCAACTGCATCACAAAAAGCAGTCTGCTTTGTAGCTCTGTACATGATTGCACTTGGTACTGGTGGAATCAAGCCGTGCGTTTCATCTTTCGGTGCTGATCAATTTGATGAAACAGACGATACTGAGAAGGAAAAGAAGAGCTCTTTCTTCAATTGGTTTTACATGTCAATCAATGTTGGTGCACTTATTGCTTCCTCGGTTTTGGTCTATATACAAATGAATGTGGGATGGAACTGGGGTTTTGGGATCCCAGCAGTTGCAATGGTCATAGCAGTTGTGTTCTTTTTCTTTGGTAGTCCATTGTACCGACTTCAGAAACCTGGAGGGAGTCCCCTCACAAGGATTATTCAGGTCATTGTTGCATCCTGCAGGAAATTCAATGTAAAAGTCCCGGATGACAAGTCTCTTCTTTATGAAACAAGAGATGCTGAGAGTAATATCCAAGGAAGCCGCAAGCTTGAGCACACAGACAAGTTAAGGTTCTTTGATAAGGCTGCTGTGGAGGACCTGAAGAGCTTGGAAAACCCATGGAAAGTCTGCACAGTTACTCAAGTAGAGGAGCTCAAGGCCATCATCCAGTTGCTTCCAATATGGGCATCTGGGATAGTCTTTGCTGCAGTTTACAGTCAAATGAGCACAATGTTTGTTTTGCAAGGCAACACAATGGATCAACATATGGGCCCCAAATTCAAGATTCCATCTGCATCTCTCTCCCTCTTTGACACAGTGAGTGTTCTCATCTGGGCTCCTATATATGACCTAGTCATTGTCCCATTTGCAAGAAAGTTCACTGGTCATCCACGAGGTTTCACCCAGCTTCAAAGAATGGGCATTGGCCTTCTCATATCCGTGTTTTCCATGGTTGTTGCTGGGATCTTGGAGGTAGTTCGGCTCGGGATTGTGCATAAAAACAATTATTATGACCGCGAATACATCCCCATGTCAATCTTTTGGCAAGTTCCACAGTACTTCCTTATTGGGTGTGCAGAGGTTTTCACATTCATTGGACAGTTGGAATTTTTCTATGACCAGGCACCTGATGCTATGAGAAGCTTGTGCTCTGCTCTCTCACTTACAACTATTTCATTGGGAAATTACCTCAGCACTCTGCTTGTTACCATCGTAACTAAAGTTACCACAAGGAATGGGAAGCTTGGTTGGATTCCAGATAACTTGAACAGGGGCCATCTTGACTATTTTTACTGGCTGTTGACCATTCTCAGCGTCATTAACTTCCTTGTGTATCTCCTCATTGCTAAGTGGTATACATACAAGAAAACAGTGGATCGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006807 GO:0006810 GO:0006857 GO:0008150 GO:0008152 GO:0009506 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0015833 GO:0016020 GO:0016043 GO:0016049 GO:0022414 GO:0022857 GO:0030054 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0035672 GO:0035673 GO:0040007 GO:0042886 GO:0042887 GO:0042937 GO:0042938 GO:0042939 GO:0044464 GO:0044706 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051179 GO:0051234 GO:0051704 GO:0055044 GO:0055085 GO:0060560 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PTR2

Protein Analysis

613

Amino Acids

68.82

Weight (kDa)

9.05

Isoelectric Point (pI)

30.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_1	PF07690	95 - 548	1.6e-14	Major Facilitator Superfamily
PTR2	PF00854	147 - 571	6.6e-126	POT family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000603)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54140 AT3G54140 AT5G01180 AT5G01180 AT5G01180
fragaria_vesca	FvH4_3g38120 FvH4_6g11961 FvH4_6g11970 FvH4_6g11970 FvH4_6g11970 FvH4_6g11970 FvH4_7g07580 FvH4_7g07580
malus_domestica	MD03G1076900.v1.1 MD04G1147500.v1.1 MD11G1081100.v1.1 MD11G1081200.v1.1 MD12G1160700.v1.1 MD12G1160900.v1.1
prunus_persica	Prupe.6G061500_v2.0.a1 Prupe.6G271100_v2.0.a1 Prupe.6G271200_v2.0.a1
pyrus_communis	pycom03g06080 pycom11g06920 pycom11g06940 pycom12g15250 pycom12g15270
rosa_chinensis	RchiOBHm_Chr1g0343091 RchiOBHm_Chr3g0463781 RchiOBHm_Chr3g0463791 RchiOBHm_Chr5g0068471 RchiOBHm_Chr5g0068501
rosa_laevigata	RLG00000024756 RLG00000024757 RLG00000029203 RLG00000035978 RLG00000035979
rosa_multiflora	Rmu_co8449979.1_g000001 Rmu_sc0000313.1_g000001 Rmu_sc0003221.1_g000016 Rmu_sc0003221.1_g000025 Rmu_sc0003221.1_g000026 Rmu_sc0004796.1_g000013 Rmu_sc0005087.1_g000011 Rmu_sc0008896.1_g000017 Rmu_sc0010201.1_g000001 Rmu_sc0017585.1_g000005
rosa_roxburghii	Rroxscaffold_1G00012300 Rroxscaffold_1G00012310 Rroxscaffold_1G00013040 Rroxscaffold_1G00013050 Rroxscaffold_4G00313320 Rroxscaffold_6G00416290 Rroxscaffold_6G00416300
rosa_rugosa	Rorug01G0144300.1 Rorug03G0067500 Rorug03G0067600 Rorug03G0067700 Rorug05G0390200 Rorug05G0390300 Rorug05G0390400.1 Rorug05G0390500 Rorug05G0390600 Rorug05G0390700
rosa_samantha	Rh1BG127900 Rh1CG150400 Rh1DG164100 Rh3AG124700 Rh3AG124800 Rh3CG131600 Rh3DG130100 Rh3DG130200 Rh5CG488500 Rh5DG480400 Rh5DG480600
rosa_wichuraiana	Rw1G013410 Rw3G010540 Rw3G010550 Rw5G041900 Rw5G041920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1582
AccI	GTMKAC	1 cut(s)	1814
AccII	CGCG	2 cut(s)	350, 1476
AciI	CCGC	5 cut(s)	247, 348, 350, 1000, 1474
AclWI	GGATC	4 cut(s)	790, 803, 1224, 1430
AcsI	RAATTY	3 cut(s)	923, 1235, 1565
AcuI	CTGAAG	3 cut(s)	305, 845, 1079
AfaI	GTAC	5 cut(s)	301, 590, 607, 854, 1517
AfiI	CCNNNNNNNGG	2 cut(s)	404, 888
AflIII	ACRYGT	1 cut(s)	711
AgsI	TTSAA	6 cut(s)	16, 700, 928, 1240, 1370, 1726
AjnI	CCWGG	3 cut(s)	143, 868, 1578
AjuI	GAANNNNNNNTTGG	2 cut(s)	140, 172
Alw21I	GWGCWC	6 cut(s)	692, 733, 1014, 1113, 1187, 1610
Alw26I	GTCTC	2 cut(s)	498, 957
Alw44I	GTGCAC	1 cut(s)	729
AlwI	GGATC	4 cut(s)	790, 803, 1224, 1430
Ama87I	CYCGRG	1 cut(s)	1442
AoxI	GGCC	5 cut(s)	141, 1116, 1228, 1384, 1732
ApaI	GGGCCC	1 cut(s)	1232
ApaLI	GTGCAC	1 cut(s)	729
ApeKI	GCWGC	2 cut(s)	1043, 1163
ApoI	RAATTY	3 cut(s)	923, 1235, 1565
AspLEI	GCGC	1 cut(s)	99
AspS9I	GGNCC	4 cut(s)	1054, 1228, 1229, 1732
AsuC2I	CCSGG	1 cut(s)	941
AsuHPI	GGTGA	2 cut(s)	322, 1351
AvaI	CYCGRG	1 cut(s)	1442
AvaII	GGWCC	1 cut(s)	1054
BaeGI	GKGCMC	2 cut(s)	733, 1232
BamHI	GGATCC	1 cut(s)	795
BanI	GGYRCC	1 cut(s)	1582
BanII	GRGCYC	4 cut(s)	692, 1113, 1232, 1297
BauI	CACGAG	1 cut(s)	1350
BbsI	GAAGAC	1 cut(s)	230
Bbv12I	GWGCWC	6 cut(s)	692, 733, 1014, 1113, 1187, 1610
BbvCI	CCTCAGC	1 cut(s)	1649
BbvI	GCAGC	2 cut(s)	1030, 1150
BccI	CCATC	8 cut(s)	145, 475, 532, 771, 1127, 1255, 1676, 1743
BceAI	ACGGC	2 cut(s)	199, 607
BciT130I	CCWGG	3 cut(s)	145, 870, 1580
BclI	TGATCA	1 cut(s)	646
BcnI	CCSGG	1 cut(s)	941
BcoDI	GTCTC	2 cut(s)	498, 957
BfaI	CTAG	3 cut(s)	36, 416, 1310
BfmI	CTRYAG	2 cut(s)	916, 1164
BisI	GCNGC	6 cut(s)	247, 348, 351, 1000, 1044, 1164
BlsI	GCNGC	6 cut(s)	248, 349, 352, 1001, 1045, 1165
BmcAI	AGTACT	1 cut(s)	1517
Bme1390I	CCNGG	4 cut(s)	145, 870, 941, 1580
Bme18I	GGWCC	1 cut(s)	1054
BmeT110I	CYCGRG	1 cut(s)	1442
BmgT120I	GGNCC	4 cut(s)	1054, 1228, 1229, 1732
BmiI	GGNNCC	7 cut(s)	409, 797, 1230, 1231, 1296, 1584, 1733
BmrFI	CCNGG	4 cut(s)	145, 870, 941, 1580
BmrI	ACTGGG	1 cut(s)	793
BmsI	GCATC	9 cut(s)	362, 412, 512, 566, 920, 964, 1154, 1262, 1579
BmuI	ACTGGG	1 cut(s)	793
BpiI	GAAGAC	1 cut(s)	230
BpmI	CTGGAG	1 cut(s)	891
Bpu10I	CCTNAGC	1 cut(s)	1649
BpuEI	CTTGAG	3 cut(s)	1028, 1083, 1097
BpuMI	CCSGG	1 cut(s)	941
BsaJI	CCNNGG	5 cut(s)	348, 744, 991, 1076, 1407
BsaWI	WCCGGW	1 cut(s)	115
Bsc4I	CCNNNNNNNGG	2 cut(s)	404, 888
Bse1I	ACTGG	6 cut(s)	232, 613, 788, 1126, 1345, 1757
Bse3DI	GCAATG	2 cut(s)	816, 1800
BseBI	CCWGG	3 cut(s)	145, 870, 1580
BseDI	CCNNGG	5 cut(s)	348, 744, 991, 1076, 1407
BseGI	GGATG	7 cut(s)	486, 782, 911, 949, 1122, 1345, 1482
BseLI	CCNNNNNNNGG	2 cut(s)	404, 888
BseMI	GCAATG	2 cut(s)	816, 1800
BseMII	CTCAG	5 cut(s)	346, 663, 969, 1663, 1783
BseNI	ACTGG	6 cut(s)	232, 613, 788, 1126, 1345, 1757
BseRI	GAGGAG	2 cut(s)	1121, 1787
BseSI	GKGCMC	2 cut(s)	733, 1232
BseXI	GCAGC	2 cut(s)	1030, 1150
BseYI	CCCAGC	3 cut(s)	799, 1362, 1418
BsgI	GTGCAG	2 cut(s)	1072, 1554
Bsh1236I	CGCG	2 cut(s)	350, 1476
BshFI	GGCC	5 cut(s)	143, 1118, 1230, 1386, 1734
BshNI	GGYRCC	1 cut(s)	1582
BsiHKAI	GWGCWC	6 cut(s)	692, 733, 1014, 1113, 1187, 1610
BsiHKCI	CYCGRG	1 cut(s)	1442
BsiSI	CCGG	2 cut(s)	116, 941
BslFI	GGGAC	3 cut(s)	864, 923, 1304
BslI	CCNNNNNNNGG	2 cut(s)	404, 888
BsmAI	GTCTC	2 cut(s)	498, 957
BsmFI	GGGAC	3 cut(s)	864, 923, 1304
BsmI	GAATGC	2 cut(s)	272, 485
BsnI	GGCC	5 cut(s)	143, 1118, 1230, 1386, 1734
BsoBI	CYCGRG	1 cut(s)	1442
Bsp120I	GGGCCC	1 cut(s)	1228
Bsp1286I	GDGCHC	8 cut(s)	692, 733, 1014, 1113, 1187, 1232, 1297, 1610
Bsp1407I	TGTACA	1 cut(s)	588
Bsp143I	GATC	5 cut(s)	646, 795, 1216, 1422, 1834
Bsp19I	CCATGG	2 cut(s)	1076, 1407
BspACI	CCGC	5 cut(s)	247, 348, 350, 1000, 1474
BspANI	GGCC	5 cut(s)	143, 1118, 1230, 1386, 1734
BspCNI	CTCAG	5 cut(s)	345, 664, 970, 1662, 1782
BspFNI	CGCG	2 cut(s)	350, 1476
BspLI	GGNNCC	7 cut(s)	409, 797, 1230, 1231, 1296, 1584, 1733
BspMAI	CTGCAG	2 cut(s)	920, 1168
BspPI	GGATC	4 cut(s)	790, 803, 1224, 1430
BspQI	GCTCTTC	2 cut(s)	680, 1055
BspT107I	GGYRCC	1 cut(s)	1582
BsrDI	GCAATG	2 cut(s)	816, 1800
BsrGI	TGTACA	1 cut(s)	588
BsrI	ACTGG	6 cut(s)	232, 613, 788, 1126, 1345, 1757
BssECI	CCNNGG	5 cut(s)	348, 744, 991, 1076, 1407
BssMI	GATC	5 cut(s)	646, 795, 1216, 1422, 1834
BssNAI	GTATAC	1 cut(s)	1815
BssSI	CACGAG	1 cut(s)	1350
BssT1I	CCWWGG	3 cut(s)	991, 1076, 1407
Bst1107I	GTATAC	1 cut(s)	1815
Bst2BI	CACGAG	1 cut(s)	1350
Bst2UI	CCWGG	3 cut(s)	145, 870, 1580
Bst4CI	ACNGT	8 cut(s)	190, 402, 1093, 1175, 1276, 1515, 1560, 1831
Bst6I	CTCTTC	3 cut(s)	680, 960, 1055
BstAPI	GCANNNNNTGC	2 cut(s)	737, 1589
BstAUI	TGTACA	1 cut(s)	588
BstC8I	GCNNGC	5 cut(s)	61, 95, 131, 244, 1004
BstDEI	CTNAG	6 cut(s)	332, 672, 978, 1649, 1769, 1806
BstDSI	CCRYGG	3 cut(s)	348, 1076, 1407
BstF5I	GGATG	7 cut(s)	486, 782, 911, 949, 1122, 1345, 1482
BstFNI	CGCG	2 cut(s)	350, 1476
BstHHI	GCGC	1 cut(s)	99
BstKTI	GATC	5 cut(s)	649, 798, 1219, 1425, 1837
BstMAI	GTCTC	2 cut(s)	498, 957
BstMBI	GATC	5 cut(s)	646, 795, 1216, 1422, 1834
BstMWI	GCNNNNNNNGC	4 cut(s)	416, 543, 737, 1589
BstNI	CCWGG	3 cut(s)	145, 870, 1580
BstNSI	RCATGY	2 cut(s)	246, 715
BstSCI	CCNGG	4 cut(s)	143, 868, 939, 1578
BstSFI	CTRYAG	2 cut(s)	916, 1164
BstSLI	GKGCMC	2 cut(s)	733, 1232
BstUI	CGCG	2 cut(s)	350, 1476
BstV1I	GCAGC	2 cut(s)	1030, 1150
BstV2I	GAAGAC	1 cut(s)	230
BstX2I	RGATCY	2 cut(s)	795, 1422
BstYI	RGATCY	2 cut(s)	795, 1422
BstZ17I	GTATAC	1 cut(s)	1815
BsuRI	GGCC	5 cut(s)	143, 1118, 1230, 1386, 1734
BtgI	CCRYGG	3 cut(s)	348, 1076, 1407
BtsCI	GGATG	7 cut(s)	486, 782, 911, 949, 1122, 1345, 1482
BtsIMutI	CAGTG	5 cut(s)	186, 398, 1281, 1338, 1836
Cac8I	GCNNGC	5 cut(s)	61, 95, 131, 244, 1004
CfoI	GCGC	1 cut(s)	99
Cfr13I	GGNCC	4 cut(s)	1054, 1228, 1229, 1732
Cfr42I	CCGCGG	1 cut(s)	351
CseI	GACGC	1 cut(s)	1762
Csp6I	GTAC	5 cut(s)	300, 589, 606, 853, 1516
CviAII	CATG	8 cut(s)	243, 337, 528, 592, 712, 1077, 1408, 1489
CviQI	GTAC	5 cut(s)	300, 589, 606, 853, 1516
DdeI	CTNAG	6 cut(s)	332, 672, 978, 1649, 1769, 1806
DpnI	GATC	5 cut(s)	648, 797, 1218, 1424, 1836
DpnII	GATC	5 cut(s)	646, 795, 1216, 1422, 1834
DraI	TTTAAA	1 cut(s)	123
Eam1104I	CTCTTC	3 cut(s)	680, 960, 1055
EarI	CTCTTC	3 cut(s)	680, 960, 1055
Ecl136II	GAGCTC	2 cut(s)	690, 1111
Eco130I	CCWWGG	3 cut(s)	991, 1076, 1407
Eco147I	AGGCCT	1 cut(s)	143
Eco24I	GRGCYC	4 cut(s)	692, 1113, 1232, 1297
Eco47I	GGWCC	1 cut(s)	1054
Eco53kI	GAGCTC	2 cut(s)	690, 1111
Eco57I	CTGAAG	3 cut(s)	305, 845, 1079
Eco88I	CYCGRG	1 cut(s)	1442
EcoICRI	GAGCTC	2 cut(s)	690, 1111
EcoO109I	RGGNCCY	2 cut(s)	1054, 1229
EcoRII	CCWGG	3 cut(s)	143, 868, 1578
EcoT14I	CCWWGG	3 cut(s)	991, 1076, 1407
EcoT22I	ATGCAT	1 cut(s)	427
EcoT38I	GRGCYC	4 cut(s)	692, 1113, 1232, 1297
ErhI	CCWWGG	3 cut(s)	991, 1076, 1407
FaeI	CATG	8 cut(s)	246, 340, 531, 595, 715, 1080, 1411, 1492
FaqI	GGGAC	3 cut(s)	864, 923, 1304
FatI	CATG	8 cut(s)	242, 336, 527, 591, 711, 1076, 1407, 1488
FauNDI	CATATG	1 cut(s)	1224
FbaI	TGATCA	1 cut(s)	646
FblI	GTMKAC	1 cut(s)	1814
Fnu4HI	GCNGC	6 cut(s)	247, 348, 351, 1000, 1044, 1164
FokI	GGATG	7 cut(s)	493, 789, 898, 956, 1109, 1332, 1469
FriOI	GRGCYC	4 cut(s)	692, 1113, 1232, 1297
Fsp4HI	GCNGC	6 cut(s)	247, 348, 351, 1000, 1044, 1164
FspBI	CTAG	3 cut(s)	36, 416, 1310
GlaI	GCGC	1 cut(s)	98
GluI	GCNGC	6 cut(s)	247, 348, 351, 1000, 1044, 1164
GsaI	CCCAGC	3 cut(s)	803, 1366, 1422
GsuI	CTGGAG	1 cut(s)	891
HaeIII	GGCC	5 cut(s)	143, 1118, 1230, 1386, 1734
HapII	CCGG	2 cut(s)	116, 941
HgaI	GACGC	1 cut(s)	1762
HhaI	GCGC	1 cut(s)	99
Hin1II	CATG	8 cut(s)	246, 340, 531, 595, 715, 1080, 1411, 1492
Hin6I	GCGC	1 cut(s)	97
HinP1I	GCGC	1 cut(s)	97
HincII	GTYRAC	1 cut(s)	1761
HindII	GTYRAC	1 cut(s)	1761
HindIII	AAGCTT	3 cut(s)	1004, 1600, 1700
HinfI	GANTC	6 cut(s)	49, 110, 615, 877, 1243, 1711
HpaII	CCGG	2 cut(s)	116, 941
HphI	GGTGA	2 cut(s)	322, 1351
Hpy166II	GTNNAC	8 cut(s)	86, 193, 313, 731, 1171, 1338, 1761, 1815
Hpy188I	TCNGA	4 cut(s)	54, 324, 498, 864
Hpy188III	TCNNGA	6 cut(s)	36, 378, 1240, 1444, 1715, 1739
Hpy8I	GTNNAC	8 cut(s)	86, 193, 313, 731, 1171, 1338, 1761, 1815
HpyAV	CCTTC	4 cut(s)	232, 421, 670, 1397
HpyCH4III	ACNGT	8 cut(s)	190, 402, 1093, 1175, 1276, 1515, 1560, 1831
HpyF10VI	GCNNNNNNNGC	4 cut(s)	416, 543, 737, 1589
HpyF3I	CTNAG	6 cut(s)	332, 672, 978, 1649, 1769, 1806
Hsp92II	CATG	8 cut(s)	246, 340, 531, 595, 715, 1080, 1411, 1492
HspAI	GCGC	1 cut(s)	97
Ksp22I	TGATCA	1 cut(s)	646
KspI	CCGCGG	1 cut(s)	351
Kzo9I	GATC	5 cut(s)	646, 795, 1216, 1422, 1834
LguI	GCTCTTC	2 cut(s)	680, 1055
LmnI	GCTCC	3 cut(s)	407, 1108, 1300
Lsp1109I	GCAGC	2 cut(s)	1030, 1150
LweI	GCATC	9 cut(s)	362, 412, 512, 566, 920, 964, 1154, 1262, 1579
MaeI	CTAG	3 cut(s)	36, 416, 1310
MaeIII	GTNAC	6 cut(s)	107, 364, 1093, 1663, 1672, 1681
MalI	GATC	5 cut(s)	648, 797, 1218, 1424, 1836
MboI	GATC	5 cut(s)	646, 795, 1216, 1422, 1834
MboII	GAAGA	9 cut(s)	160, 176, 235, 311, 447, 688, 697, 947, 1072
MfeI	CAATTG	2 cut(s)	232, 700
MflI	RGATCY	2 cut(s)	795, 1422
MhlI	GDGCHC	8 cut(s)	692, 733, 1014, 1113, 1187, 1232, 1297, 1610
MlyI	GAGTC	2 cut(s)	104, 886
MmeI	TCCRAC	2 cut(s)	1542, 1688
Mph1103I	ATGCAT	1 cut(s)	427
MseI	TTAA	3 cut(s)	122, 1025, 1779
MslI	CAYNNNNRTG	2 cut(s)	1397, 1487
MspA1I	CMGCKG	1 cut(s)	350
MspI	CCGG	2 cut(s)	116, 941
MspR9I	CCNGG	4 cut(s)	145, 870, 941, 1580
MunI	CAATTG	2 cut(s)	232, 700
Mva1269I	GAATGC	2 cut(s)	272, 485
MvaI	CCWGG	3 cut(s)	145, 870, 1580
MvnI	CGCG	2 cut(s)	350, 1476
MwoI	GCNNNNNNNGC	4 cut(s)	416, 543, 737, 1589
NciI	CCSGG	1 cut(s)	941
NcoI	CCATGG	2 cut(s)	1076, 1407
NdeI	CATATG	1 cut(s)	1224
NdeII	GATC	5 cut(s)	646, 795, 1216, 1422, 1834
NlaIII	CATG	8 cut(s)	246, 340, 531, 595, 715, 1080, 1411, 1492
NlaIV	GGNNCC	7 cut(s)	409, 797, 1230, 1231, 1296, 1584, 1733
NmuCI	GTSAC	2 cut(s)	107, 364
NsiI	ATGCAT	1 cut(s)	427
NspI	RCATGY	2 cut(s)	246, 715
PaeI	GCATGC	1 cut(s)	246
PceI	AGGCCT	1 cut(s)	143
PciI	ACATGT	1 cut(s)	711
PciSI	GCTCTTC	2 cut(s)	680, 1055
PctI	GAATGC	2 cut(s)	272, 485
PfeI	GAWTC	4 cut(s)	49, 615, 1243, 1711
PflFI	GACNNNGTC	1 cut(s)	1310
PfoI	TCCNGGA	1 cut(s)	939
PkrI	GCNGC	6 cut(s)	248, 349, 352, 1001, 1045, 1165
PleI	GAGTC	2 cut(s)	104, 885
PpsI	GAGTC	2 cut(s)	104, 885
PpuMI	RGGWCCY	1 cut(s)	1054
PscI	ACATGT	1 cut(s)	711
Psp124BI	GAGCTC	2 cut(s)	692, 1113
Psp5II	RGGWCCY	1 cut(s)	1054
Psp6I	CCWGG	3 cut(s)	143, 868, 1578
PspFI	CCCAGC	3 cut(s)	799, 1362, 1418
PspGI	CCWGG	3 cut(s)	143, 868, 1578
PspN4I	GGNNCC	7 cut(s)	409, 797, 1230, 1231, 1296, 1584, 1733
PspOMI	GGGCCC	1 cut(s)	1228
PspPI	GGNCC	4 cut(s)	1054, 1228, 1229, 1732
PspPPI	RGGWCCY	1 cut(s)	1054
PstI	CTGCAG	2 cut(s)	920, 1168
PsuI	RGATCY	2 cut(s)	795, 1422
PsyI	GACNNNGTC	1 cut(s)	1310
RsaI	GTAC	5 cut(s)	301, 590, 607, 854, 1517
RsaNI	GTAC	5 cut(s)	300, 589, 606, 853, 1516
RseI	CAYNNNNRTG	2 cut(s)	1397, 1487
SacI	GAGCTC	2 cut(s)	692, 1113
SacII	CCGCGG	1 cut(s)	351
SapI	GCTCTTC	2 cut(s)	680, 1055
SaqAI	TTAA	3 cut(s)	122, 1025, 1779
SatI	GCNGC	6 cut(s)	247, 348, 351, 1000, 1044, 1164
Sau3AI	GATC	5 cut(s)	646, 795, 1216, 1422, 1834
Sau96I	GGNCC	4 cut(s)	1054, 1228, 1229, 1732
SbfI	CCTGCAGG	1 cut(s)	920
ScaI	AGTACT	1 cut(s)	1517
SchI	GAGTC	2 cut(s)	104, 886
ScrFI	CCNGG	4 cut(s)	145, 870, 941, 1580
SdaI	CCTGCAGG	1 cut(s)	920
SduI	GDGCHC	8 cut(s)	692, 733, 1014, 1113, 1187, 1232, 1297, 1610
SfaNI	GCATC	9 cut(s)	362, 412, 512, 566, 920, 964, 1154, 1262, 1579
SfcI	CTRYAG	2 cut(s)	916, 1164
Sfr303I	CCGCGG	1 cut(s)	351
SgrBI	CCGCGG	1 cut(s)	351
SinI	GGWCC	1 cut(s)	1054
SmiMI	CAYNNNNRTG	2 cut(s)	1397, 1487
SmlI	CTYRAG	3 cut(s)	1007, 1098, 1112
SmoI	CTYRAG	3 cut(s)	1007, 1098, 1112
SphI	GCATGC	1 cut(s)	246
Sse8387I	CCTGCAGG	1 cut(s)	920
SseBI	AGGCCT	1 cut(s)	143
SsiI	CCGC	5 cut(s)	247, 348, 350, 1000, 1474
SspMI	CTAG	3 cut(s)	36, 416, 1310
SstI	GAGCTC	2 cut(s)	692, 1113
StuI	AGGCCT	1 cut(s)	143
StyD4I	CCNGG	4 cut(s)	143, 868, 939, 1578
StyI	CCWWGG	3 cut(s)	991, 1076, 1407
TaaI	ACNGT	8 cut(s)	190, 402, 1093, 1175, 1276, 1515, 1560, 1831
TatI	WGTACW	2 cut(s)	588, 1515
TauI	GCSGC	4 cut(s)	249, 350, 353, 1002
TfiI	GAWTC	4 cut(s)	49, 615, 1243, 1711
Tru1I	TTAA	3 cut(s)	122, 1025, 1779
Tru9I	TTAA	3 cut(s)	122, 1025, 1779
TscAI	CASTG	5 cut(s)	193, 405, 1281, 1345, 1836
TseFI	GTSAC	2 cut(s)	107, 364
TseI	GCWGC	2 cut(s)	1043, 1163
Tsp45I	GTSAC	2 cut(s)	107, 364
TspDTI	ATGAA	8 cut(s)	183, 279, 621, 672, 782, 978, 1540, 1623
TspGWI	ACGGA	1 cut(s)	1387
TspRI	CASTG	5 cut(s)	193, 405, 1281, 1345, 1836
Tth111I	GACNNNGTC	1 cut(s)	1310
VneI	GTGCAC	1 cut(s)	729
VpaK11BI	GGWCC	1 cut(s)	1054
XapI	RAATTY	3 cut(s)	923, 1235, 1565
XbaI	TCTAGA	1 cut(s)	35
XceI	RCATGY	2 cut(s)	246, 715
XmiI	GTMKAC	1 cut(s)	1814
XspI	CTAG	3 cut(s)	36, 416, 1310
ZrmI	AGTACT	1 cut(s)	1517
Zsp2I	ATGCAT	1 cut(s)	427

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.