Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0000603

Physical Location & Seq

Genomic Coordinates Reverse (-)

24039618 .. 24042029

Gene Structure 2412 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1160700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGGTGGGCGATGATTTTTACACGAACGATGGGACTCTGGACATCCATAAAAAACCGGCTAACAAGAAGAAGACTGGAAATTGGAAGGCATGCCGCTTTATTCTCGGAAATGAGTGCTGTGAAAGATTGGCATACTATGGAATGAGTACCAATCTAGTGAACTATCTCGAGAAACGTCTCGGCATGGGAAATGTCACGGCAGCAACCAGCGTCTCTAATTGGTCAGGGACGTGCTACGCAACGCCATTGATAGGAGCCTTCCTAGCTGATGCATACTTGGGAAGATATTGGACAATTGCCATCTTTTCAATCGTTTATGTTCTTGGTATGACACTCTTGACCCTCACTGCATCTATCAATGGATTAAAACCGCATTGCGATAGCTCTGGTTGCAACTCAACATCATCCCAAAGAGCGACCTGCTTTGTAGCTCTGTACTTGATTGCAGTAGGTACTGGTGGAATCAAGCCATGCGTTTCATCCTTCGGCGCAGATCAATTTGATGAAACTGACGAGACTGAGAGGAAGAAGAAGAGCTCCTTCTTCAACTGGTTTTACATGTCAATCAATGTCGGTGCGCTTATTGCTTCCACAGTTTTGGTCTGGATGCAAATGAATGTGGGATGGAATTGGGGGTTCGGAGTCCCAGCTGTTGCAATGGGGATTGCAGTTGTGTTCTTTTTCTTGGGAAGCAAGTTATATCGTCTTCAGAAACCAGGCGGGAGTCCCCTCACAAGGATTGCTCAGGTGGTTGCTGCATCCATCAGGAAACACAAAGTGAAAGTTCCTGCTGACAAGTCTCTTCTCTATGAGACTGCAGATGAGGAGTGCAACATCCAAGGAAGCCGGAAGCTTGAGCACACCAACCAATTAGGGTTCTTTGACAAGGCAGCCGTGGAGTCAGAGACAAACCGTGCCAAGGAATTGCCAAGCCCATGGAGCCTCTGCACAGTGACACAAGTAGAGGAGCTGAAATCCATCATCAGACTCCTCCCCATCTGGGCGTCTGGTATAGTCTTCGCCACCGTCTACGGCCAAATGAGCACAATGTTTGTCCTCCAAGGCAACACCCTAGACCAACACATGGGCCCAAACTTCAAAATCCCATCAGCCTCCCTCTCCCTCTTCGACACTGTCAGCGTCATCTTCTGGGCTCCGATATACGACAGGCTCATCGTCCCCCTCGCCAGGCACTTCACGGGCCACGAACGAGGCTTCAGGACGCTTCAACGGATGGGAATCGGCCTAGCACTCTCCATATTCTCCATGGTTGTTGCTGGGGTTTTGGAGGTCGTTAGGCTTGCCACTGTCAAAAAATATAATTACTACGACCTAGAGTACATTCCCATGTCGATTTTCTGGCAGGTCCCGCAGTATTTCATCATTGGGTGTGCTGAGGTTTTCACCTTCATTGGGCAGATGGAGTTTTTTTACGACCAGGCGCCTGACGCCATGAGAAGCTTGTGCTCTGCACTGTCACTGACCACTGTTGCACTGGGGAATTACCTCAGCACTCTGCTAGTTACTGTGGTAACTAAAGTTACCACGAAGAATGGGAATCTTGGGTGGATTCCGGATAACCTTAACAGGGGACACCTGGACTATTTTTATTGGCTGTTGGCTATTCTGAGCGTTATTAATTTCTTGGTGTACCTCTGGATTGCTAAGTGGTACACTTACAAGAAGGTGACTGGGTGTGCTCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006807 GO:0006810 GO:0006857 GO:0008150 GO:0008152 GO:0009506 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0015833 GO:0016020 GO:0016043 GO:0016049 GO:0022414 GO:0022857 GO:0030054 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0035672 GO:0035673 GO:0040007 GO:0042886 GO:0042887 GO:0042937 GO:0042938 GO:0042939 GO:0044464 GO:0044706 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051179 GO:0051234 GO:0051704 GO:0055044 GO:0055085 GO:0060560 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PTR2

Protein Analysis

569

Amino Acids

63.32

Weight (kDa)

8.84

Isoelectric Point (pI)

24.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_1	PF07690	42 - 501	1e-14	Major Facilitator Superfamily
PTR2	PF00854	96 - 524	7.9e-124	POT family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000603)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54140 AT3G54140 AT5G01180 AT5G01180 AT5G01180
fragaria_vesca	FvH4_3g38120 FvH4_6g11961 FvH4_6g11970 FvH4_6g11970 FvH4_6g11970 FvH4_6g11970 FvH4_7g07580 FvH4_7g07580
malus_domestica	MD03G1076900.v1.1 MD04G1147500.v1.1 MD11G1081100.v1.1 MD11G1081200.v1.1 MD12G1160700.v1.1 MD12G1160900.v1.1
prunus_persica	Prupe.6G061500_v2.0.a1 Prupe.6G271100_v2.0.a1 Prupe.6G271200_v2.0.a1
pyrus_communis	pycom03g06080 pycom11g06920 pycom11g06940 pycom12g15250 pycom12g15270
rosa_chinensis	RchiOBHm_Chr1g0343091 RchiOBHm_Chr3g0463781 RchiOBHm_Chr3g0463791 RchiOBHm_Chr5g0068471 RchiOBHm_Chr5g0068501
rosa_laevigata	RLG00000024756 RLG00000024757 RLG00000029203 RLG00000035978 RLG00000035979
rosa_multiflora	Rmu_co8449979.1_g000001 Rmu_sc0000313.1_g000001 Rmu_sc0003221.1_g000016 Rmu_sc0003221.1_g000025 Rmu_sc0003221.1_g000026 Rmu_sc0004796.1_g000013 Rmu_sc0005087.1_g000011 Rmu_sc0008896.1_g000017 Rmu_sc0010201.1_g000001 Rmu_sc0017585.1_g000005
rosa_roxburghii	Rroxscaffold_1G00012300 Rroxscaffold_1G00012310 Rroxscaffold_1G00013040 Rroxscaffold_1G00013050 Rroxscaffold_4G00313320 Rroxscaffold_6G00416290 Rroxscaffold_6G00416300
rosa_rugosa	Rorug01G0144300.1 Rorug03G0067500 Rorug03G0067600 Rorug03G0067700 Rorug05G0390200 Rorug05G0390300 Rorug05G0390400.1 Rorug05G0390500 Rorug05G0390600 Rorug05G0390700
rosa_samantha	Rh1BG127900 Rh1CG150400 Rh1DG164100 Rh3AG124700 Rh3AG124800 Rh3CG131600 Rh3DG130100 Rh3DG130200 Rh5CG488500 Rh5DG480400 Rh5DG480600
rosa_wichuraiana	Rw1G013410 Rw3G010540 Rw3G010550 Rw5G041900 Rw5G041920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	428, 1354
AccB1I	GGYRCC	1 cut(s)	1441
AccB7I	CCANNNNNTGG	1 cut(s)	1084
AccI	GTMKAC	1 cut(s)	1029
AccIII	TCCGGA	1 cut(s)	1573
AciI	CCGC	4 cut(s)	94, 371, 720, 1370
AcoI	YGGCCR	1 cut(s)	1033
AcuI	CTGAAG	2 cut(s)	692, 1201
AcyI	GRCGYC	3 cut(s)	1004, 1442, 1449
AdeI	CACNNNGTG	1 cut(s)	778
AfaI	GTAC	6 cut(s)	148, 437, 454, 1340, 1652, 1673
AfiI	CCNNNNNNNGG	8 cut(s)	251, 735, 919, 1000, 1084, 1188, 1413, 1588
AflIII	ACRYGT	1 cut(s)	558
AgsI	TTSAA	4 cut(s)	309, 547, 1099, 1229
AjiI	CACGTC	1 cut(s)	231
AjnI	CCWGG	4 cut(s)	715, 1187, 1437, 1596
AluBI	AGCT	8 cut(s)	266, 384, 431, 537, 650, 853, 970, 1461
AluI	AGCT	8 cut(s)	266, 384, 431, 537, 650, 853, 970, 1461
Alw21I	GWGCWC	5 cut(s)	539, 861, 1046, 1469, 1702
Alw26I	GTCTC	6 cut(s)	182, 217, 509, 804, 806, 899
Ama87I	CYCGRG	1 cut(s)	167
Aor13HI	TCCGGA	1 cut(s)	1573
AoxI	GGCC	4 cut(s)	1033, 1087, 1201, 1243
ApaI	GGGCCC	1 cut(s)	1091
ApeKI	GCWGC	3 cut(s)	200, 755, 890
AseI	ATTAAT	1 cut(s)	1638
AspLEI	GCGC	3 cut(s)	491, 580, 1444
AspS9I	GGNCC	4 cut(s)	1087, 1088, 1201, 1366
AsuHPI	GGTGA	2 cut(s)	1396, 1699
AvaI	CYCGRG	1 cut(s)	167
AvaII	GGWCC	1 cut(s)	1366
BaeGI	GKGCMC	1 cut(s)	1091
BanI	GGYRCC	1 cut(s)	1441
BanII	GRGCYC	3 cut(s)	539, 1091, 1156
BbsI	GAAGAC	3 cut(s)	77, 698, 1009
Bbv12I	GWGCWC	5 cut(s)	539, 861, 1046, 1469, 1702
BbvCI	CCTCAGC	2 cut(s)	1395, 1508
BbvI	GCAGC	3 cut(s)	212, 742, 902
BccI	CCATC	9 cut(s)	23, 308, 618, 770, 986, 1004, 1114, 1228, 1414
BceAI	ACGGC	3 cut(s)	213, 878, 1048
BciT130I	CCWGG	4 cut(s)	717, 1189, 1439, 1598
BcoDI	GTCTC	6 cut(s)	182, 217, 509, 804, 806, 899
BfaI	CTAG	6 cut(s)	155, 263, 1073, 1247, 1334, 1520
BfmI	CTRYAG	1 cut(s)	816
BfoI	RGCGCY	1 cut(s)	1445
BfuAI	ACCTGC	2 cut(s)	428, 1354
BisI	GCNGC	4 cut(s)	94, 201, 756, 891
BlsI	GCNGC	4 cut(s)	95, 202, 757, 892
Bme1390I	CCNGG	4 cut(s)	717, 1189, 1439, 1598
Bme18I	GGWCC	1 cut(s)	1366
BmeT110I	CYCGRG	1 cut(s)	167
BmgBI	CACGTC	1 cut(s)	231
BmgT120I	GGNCC	4 cut(s)	1087, 1088, 1201, 1366
BmiI	GGNNCC	6 cut(s)	256, 941, 1089, 1155, 1368, 1443
BmrFI	CCNGG	4 cut(s)	717, 1189, 1439, 1598
BmrI	ACTGGG	2 cut(s)	1505, 1701
BmsI	GCATC	4 cut(s)	259, 359, 597, 767
BmuI	ACTGGG	2 cut(s)	1505, 1701
BpiI	GAAGAC	3 cut(s)	77, 698, 1009
Bpu10I	CCTNAGC	3 cut(s)	744, 1395, 1508
BpuEI	CTTGAG	1 cut(s)	875
BsaBI	GATNNNNATC	1 cut(s)	1238
BsaHI	GRCGYC	3 cut(s)	1004, 1442, 1449
BsaJI	CCNNGG	6 cut(s)	838, 894, 918, 935, 1060, 1266
BsaWI	WCCGGW	1 cut(s)	1573
Bsc4I	CCNNNNNNNGG	8 cut(s)	251, 735, 919, 1000, 1084, 1188, 1413, 1588
Bse118I	RCCGGY	1 cut(s)	55
Bse1I	ACTGG	5 cut(s)	79, 460, 554, 1500, 1696
Bse3DI	GCAATG	2 cut(s)	373, 663
Bse8I	GATNNNNATC	1 cut(s)	1238
BseAI	TCCGGA	1 cut(s)	1573
BseBI	CCWGG	4 cut(s)	717, 1189, 1439, 1598
BseDI	CCNNGG	6 cut(s)	838, 894, 918, 935, 1060, 1266
BseGI	GGATG	8 cut(s)	42, 404, 479, 612, 629, 758, 834, 1239
BseJI	GATNNNNATC	1 cut(s)	1238
BseLI	CCNNNNNNNGG	8 cut(s)	251, 735, 919, 1000, 1084, 1188, 1413, 1588
BseMI	GCAATG	2 cut(s)	373, 663
BseMII	CTCAG	5 cut(s)	510, 758, 1386, 1522, 1619
BseNI	ACTGG	5 cut(s)	79, 460, 554, 1500, 1696
BseRI	GAGGAG	3 cut(s)	839, 980, 980
BseSI	GKGCMC	1 cut(s)	1091
BseXI	GCAGC	3 cut(s)	212, 742, 902
BseYI	CCCAGC	2 cut(s)	646, 1277
BsgI	GTGCAG	2 cut(s)	931, 1455
BshFI	GGCC	4 cut(s)	1035, 1089, 1203, 1245
BshNI	GGYRCC	1 cut(s)	1441
BsiHKAI	GWGCWC	5 cut(s)	539, 861, 1046, 1469, 1702
BsiHKCI	CYCGRG	1 cut(s)	167
BsiSI	CCGG	3 cut(s)	56, 847, 1574
BslFI	GGGAC	7 cut(s)	46, 241, 629, 711, 1163, 1352, 1605
BslI	CCNNNNNNNGG	8 cut(s)	251, 735, 919, 1000, 1084, 1188, 1413, 1588
BsmAI	GTCTC	6 cut(s)	182, 217, 509, 804, 806, 899
BsmBI	CGTCTC	2 cut(s)	182, 217
BsmFI	GGGAC	7 cut(s)	46, 241, 629, 711, 1163, 1352, 1605
BsnI	GGCC	4 cut(s)	1035, 1089, 1203, 1245
BsoBI	CYCGRG	1 cut(s)	167
Bsp120I	GGGCCC	1 cut(s)	1087
Bsp1286I	GDGCHC	7 cut(s)	539, 861, 1046, 1091, 1156, 1469, 1702
Bsp13I	TCCGGA	1 cut(s)	1573
Bsp143I	GATC	1 cut(s)	493
Bsp19I	CCATGG	2 cut(s)	935, 1266
BspACI	CCGC	4 cut(s)	94, 371, 720, 1370
BspANI	GGCC	4 cut(s)	1035, 1089, 1203, 1245
BspCNI	CTCAG	5 cut(s)	511, 757, 1387, 1521, 1620
BspEI	TCCGGA	1 cut(s)	1573
BspLI	GGNNCC	6 cut(s)	256, 941, 1089, 1155, 1368, 1443
BspMAI	CTGCAG	1 cut(s)	820
BspMI	ACCTGC	2 cut(s)	428, 1354
BspQI	GCTCTTC	1 cut(s)	527
BspT107I	GGYRCC	1 cut(s)	1441
BsrDI	GCAATG	2 cut(s)	373, 663
BsrFI	RCCGGY	1 cut(s)	55
BsrI	ACTGG	5 cut(s)	79, 460, 554, 1500, 1696
BssAI	RCCGGY	1 cut(s)	55
BssECI	CCNNGG	6 cut(s)	838, 894, 918, 935, 1060, 1266
BssMI	GATC	1 cut(s)	493
BssNI	GRCGYC	3 cut(s)	1004, 1442, 1449
BssT1I	CCWWGG	5 cut(s)	838, 918, 935, 1060, 1266
Bst2UI	CCWGG	4 cut(s)	717, 1189, 1439, 1598
Bst4CI	ACNGT	9 cut(s)	595, 914, 952, 1027, 1135, 1309, 1476, 1489, 1528
Bst6I	CTCTTC	3 cut(s)	527, 807, 1130
BstACI	GRCGYC	3 cut(s)	1004, 1442, 1449
BstC8I	GCNNGC	2 cut(s)	91, 1302
BstDEI	CTNAG	6 cut(s)	519, 744, 1395, 1508, 1628, 1665
BstDSI	CCRYGG	3 cut(s)	894, 935, 1266
BstF5I	GGATG	8 cut(s)	42, 404, 479, 612, 629, 758, 834, 1239
BstH2I	RGCGCY	1 cut(s)	1445
BstHHI	GCGC	3 cut(s)	491, 580, 1444
BstKTI	GATC	1 cut(s)	496
BstMAI	GTCTC	6 cut(s)	182, 217, 509, 804, 806, 899
BstMBI	GATC	1 cut(s)	493
BstMWI	GCNNNNNNNGC	7 cut(s)	263, 390, 584, 939, 1041, 1369, 1448
BstNI	CCWGG	4 cut(s)	717, 1189, 1439, 1598
BstNSI	RCATGY	2 cut(s)	93, 562
BstSCI	CCNGG	4 cut(s)	715, 1187, 1437, 1596
BstSFI	CTRYAG	1 cut(s)	816
BstSLI	GKGCMC	1 cut(s)	1091
BstV1I	GCAGC	3 cut(s)	212, 742, 902
BstV2I	GAAGAC	3 cut(s)	77, 698, 1009
BstXI	CCANNNNNNTGG	2 cut(s)	598, 936
BsuRI	GGCC	4 cut(s)	1035, 1089, 1203, 1245
BtgI	CCRYGG	3 cut(s)	894, 935, 1266
BtgZI	GCGATG	1 cut(s)	24
BtrI	CACGTC	1 cut(s)	231
BtsCI	GGATG	8 cut(s)	42, 404, 479, 612, 629, 758, 834, 1239
BtsI	GCAGTG	1 cut(s)	345
BtsIMutI	CAGTG	8 cut(s)	345, 957, 1131, 1305, 1472, 1478, 1485, 1493
BveI	ACCTGC	2 cut(s)	428, 1354
Cac8I	GCNNGC	2 cut(s)	91, 1302
CfoI	GCGC	3 cut(s)	491, 580, 1444
Cfr10I	RCCGGY	1 cut(s)	55
Cfr13I	GGNCC	4 cut(s)	1087, 1088, 1201, 1366
CseI	GACGC	5 cut(s)	199, 993, 1129, 1231, 1457
Csp6I	GTAC	6 cut(s)	147, 436, 453, 1339, 1651, 1672
CviAII	CATG	9 cut(s)	90, 184, 471, 559, 936, 1084, 1267, 1348, 1453
CviQI	GTAC	6 cut(s)	147, 436, 453, 1339, 1651, 1672
DdeI	CTNAG	6 cut(s)	519, 744, 1395, 1508, 1628, 1665
DinI	GGCGCC	1 cut(s)	1443
DpnI	GATC	1 cut(s)	495
DpnII	GATC	1 cut(s)	493
DraIII	CACNNNGTG	1 cut(s)	778
EaeI	YGGCCR	1 cut(s)	1033
Eam1104I	CTCTTC	3 cut(s)	527, 807, 1130
EarI	CTCTTC	3 cut(s)	527, 807, 1130
Ecl136II	GAGCTC	1 cut(s)	537
Eco130I	CCWWGG	5 cut(s)	838, 918, 935, 1060, 1266
Eco24I	GRGCYC	3 cut(s)	539, 1091, 1156
Eco47I	GGWCC	1 cut(s)	1366
Eco53kI	GAGCTC	1 cut(s)	537
Eco57I	CTGAAG	2 cut(s)	692, 1201
Eco88I	CYCGRG	1 cut(s)	167
EcoICRI	GAGCTC	1 cut(s)	537
EcoO109I	RGGNCCY	1 cut(s)	1366
EcoRII	CCWGG	4 cut(s)	715, 1187, 1437, 1596
EcoT14I	CCWWGG	5 cut(s)	838, 918, 935, 1060, 1266
EcoT22I	ATGCAT	1 cut(s)	274
EcoT38I	GRGCYC	3 cut(s)	539, 1091, 1156
EgeI	GGCGCC	1 cut(s)	1443
EheI	GGCGCC	1 cut(s)	1443
ErhI	CCWWGG	5 cut(s)	838, 918, 935, 1060, 1266
Esp3I	CGTCTC	2 cut(s)	182, 217
FaeI	CATG	9 cut(s)	93, 187, 474, 562, 939, 1087, 1270, 1351, 1456
FalI	AAGNNNNNCTT	2 cut(s)	524, 556
FaqI	GGGAC	7 cut(s)	46, 241, 629, 711, 1163, 1352, 1605
FatI	CATG	9 cut(s)	89, 183, 470, 558, 935, 1083, 1266, 1347, 1452
FauI	CCCGC	2 cut(s)	713, 1377
FblI	GTMKAC	1 cut(s)	1029
Fnu4HI	GCNGC	4 cut(s)	94, 201, 756, 891
FokI	GGATG	8 cut(s)	29, 391, 466, 619, 636, 745, 821, 1246
FriOI	GRGCYC	3 cut(s)	539, 1091, 1156
Fsp4HI	GCNGC	4 cut(s)	94, 201, 756, 891
FspBI	CTAG	6 cut(s)	155, 263, 1073, 1247, 1334, 1520
GlaI	GCGC	3 cut(s)	490, 579, 1443
GluI	GCNGC	4 cut(s)	94, 201, 756, 891
GsaI	CCCAGC	2 cut(s)	650, 1281
HaeII	RGCGCY	1 cut(s)	1445
HaeIII	GGCC	4 cut(s)	1035, 1089, 1203, 1245
HapII	CCGG	3 cut(s)	56, 847, 1574
HgaI	GACGC	5 cut(s)	199, 993, 1129, 1231, 1457
HhaI	GCGC	3 cut(s)	491, 580, 1444
Hin1I	GRCGYC	3 cut(s)	1004, 1442, 1449
Hin1II	CATG	9 cut(s)	93, 187, 474, 562, 939, 1087, 1270, 1351, 1456
Hin6I	GCGC	3 cut(s)	489, 578, 1442
HinP1I	GCGC	3 cut(s)	489, 578, 1442
HindIII	AAGCTT	2 cut(s)	851, 1459
HinfI	GANTC	9 cut(s)	34, 462, 642, 724, 899, 987, 1239, 1558, 1570
HpaII	CCGG	3 cut(s)	56, 847, 1574
HphI	GGTGA	2 cut(s)	1396, 1699
Hpy166II	GTNNAC	4 cut(s)	160, 1030, 1651, 1674
Hpy188I	TCNGA	7 cut(s)	107, 641, 711, 904, 986, 1158, 1629
Hpy188III	TCNNGA	9 cut(s)	38, 167, 169, 337, 604, 766, 1219, 1574, 1657
Hpy8I	GTNNAC	4 cut(s)	160, 1030, 1651, 1674
HpyAV	CCTTC	6 cut(s)	79, 268, 493, 550, 1417, 1678
HpyCH4III	ACNGT	9 cut(s)	595, 914, 952, 1027, 1135, 1309, 1476, 1489, 1528
HpyCH4IV	ACGT	2 cut(s)	175, 230
HpyF10VI	GCNNNNNNNGC	7 cut(s)	263, 390, 584, 939, 1041, 1369, 1448
HpyF3I	CTNAG	6 cut(s)	519, 744, 1395, 1508, 1628, 1665
HpySE526I	ACGT	2 cut(s)	175, 230
Hsp92I	GRCGYC	3 cut(s)	1004, 1442, 1449
Hsp92II	CATG	9 cut(s)	93, 187, 474, 562, 939, 1087, 1270, 1351, 1456
HspAI	GCGC	3 cut(s)	489, 578, 1442
KasI	GGCGCC	1 cut(s)	1441
Kpn2I	TCCGGA	1 cut(s)	1573
Kzo9I	GATC	1 cut(s)	493
LguI	GCTCTTC	1 cut(s)	527
LmnI	GCTCC	5 cut(s)	254, 542, 939, 967, 1159
Lsp1109I	GCAGC	3 cut(s)	212, 742, 902
LweI	GCATC	4 cut(s)	259, 359, 597, 767
MaeI	CTAG	6 cut(s)	155, 263, 1073, 1247, 1334, 1520
MaeII	ACGT	2 cut(s)	175, 230
MaeIII	GTNAC	7 cut(s)	193, 952, 1476, 1522, 1531, 1540, 1687
MalI	GATC	1 cut(s)	495
MboI	GATC	1 cut(s)	493
MfeI	CAATTG	1 cut(s)	294
MhlI	GDGCHC	7 cut(s)	539, 861, 1046, 1091, 1156, 1469, 1702
Mly113I	GGCGCC	1 cut(s)	1442
MlyI	GAGTC	5 cut(s)	28, 651, 733, 908, 981
Mph1103I	ATGCAT	1 cut(s)	274
MroI	TCCGGA	1 cut(s)	1573
MseI	TTAA	3 cut(s)	365, 1584, 1638
MslI	CAYNNNNRTG	1 cut(s)	1346
MspA1I	CMGCKG	1 cut(s)	650
MspI	CCGG	3 cut(s)	56, 847, 1574
MspR9I	CCNGG	4 cut(s)	717, 1189, 1439, 1598
MunI	CAATTG	1 cut(s)	294
MvaI	CCWGG	4 cut(s)	717, 1189, 1439, 1598
MwoI	GCNNNNNNNGC	7 cut(s)	263, 390, 584, 939, 1041, 1369, 1448
NarI	GGCGCC	1 cut(s)	1442
NcoI	CCATGG	2 cut(s)	935, 1266
NdeII	GATC	1 cut(s)	493
NlaIII	CATG	9 cut(s)	93, 187, 474, 562, 939, 1087, 1270, 1351, 1456
NlaIV	GGNNCC	6 cut(s)	256, 941, 1089, 1155, 1368, 1443
NmeAIII	GCCGAG	1 cut(s)	159
NmuCI	GTSAC	4 cut(s)	193, 952, 1476, 1687
NsiI	ATGCAT	1 cut(s)	274
NspI	RCATGY	2 cut(s)	93, 562
PaeI	GCATGC	1 cut(s)	93
PaeR7I	CTCGAG	1 cut(s)	167
PciI	ACATGT	1 cut(s)	558
PciSI	GCTCTTC	1 cut(s)	527
PfeI	GAWTC	4 cut(s)	462, 1239, 1558, 1570
PflFI	GACNNNGTC	1 cut(s)	1133
PflMI	CCANNNNNTGG	1 cut(s)	1084
PkrI	GCNGC	4 cut(s)	95, 202, 757, 892
PleI	GAGTC	5 cut(s)	28, 650, 732, 907, 981
PluTI	GGCGCC	1 cut(s)	1445
PpsI	GAGTC	5 cut(s)	28, 650, 732, 907, 981
PpuMI	RGGWCCY	1 cut(s)	1366
PscI	ACATGT	1 cut(s)	558
PshBI	ATTAAT	1 cut(s)	1638
Psp124BI	GAGCTC	1 cut(s)	539
Psp5II	RGGWCCY	1 cut(s)	1366
Psp6I	CCWGG	4 cut(s)	715, 1187, 1437, 1596
PspFI	CCCAGC	2 cut(s)	646, 1277
PspGI	CCWGG	4 cut(s)	715, 1187, 1437, 1596
PspN4I	GGNNCC	6 cut(s)	256, 941, 1089, 1155, 1368, 1443
PspOMI	GGGCCC	1 cut(s)	1087
PspPI	GGNCC	4 cut(s)	1087, 1088, 1201, 1366
PspPPI	RGGWCCY	1 cut(s)	1366
PstI	CTGCAG	1 cut(s)	820
PsyI	GACNNNGTC	1 cut(s)	1133
PvuII	CAGCTG	1 cut(s)	650
RsaI	GTAC	6 cut(s)	148, 437, 454, 1340, 1652, 1673
RsaNI	GTAC	6 cut(s)	147, 436, 453, 1339, 1651, 1672
RseI	CAYNNNNRTG	1 cut(s)	1346
SacI	GAGCTC	1 cut(s)	539
SapI	GCTCTTC	1 cut(s)	527
SaqAI	TTAA	3 cut(s)	365, 1584, 1638
SatI	GCNGC	4 cut(s)	94, 201, 756, 891
Sau3AI	GATC	1 cut(s)	493
Sau96I	GGNCC	4 cut(s)	1087, 1088, 1201, 1366
SchI	GAGTC	5 cut(s)	28, 651, 733, 908, 981
ScrFI	CCNGG	4 cut(s)	717, 1189, 1439, 1598
SduI	GDGCHC	7 cut(s)	539, 861, 1046, 1091, 1156, 1469, 1702
SfaNI	GCATC	4 cut(s)	259, 359, 597, 767
SfcI	CTRYAG	1 cut(s)	816
SfoI	GGCGCC	1 cut(s)	1443
Sfr274I	CTCGAG	1 cut(s)	167
SinI	GGWCC	1 cut(s)	1366
SlaI	CTCGAG	1 cut(s)	167
SmiMI	CAYNNNNRTG	1 cut(s)	1346
SmlI	CTYRAG	2 cut(s)	167, 854
SmoI	CTYRAG	2 cut(s)	167, 854
SphI	GCATGC	1 cut(s)	93
SsiI	CCGC	4 cut(s)	94, 371, 720, 1370
SspDI	GGCGCC	1 cut(s)	1441
SspMI	CTAG	6 cut(s)	155, 263, 1073, 1247, 1334, 1520
SstI	GAGCTC	1 cut(s)	539
StyD4I	CCNGG	4 cut(s)	715, 1187, 1437, 1596
StyI	CCWWGG	5 cut(s)	838, 918, 935, 1060, 1266
TaaI	ACNGT	9 cut(s)	595, 914, 952, 1027, 1135, 1309, 1476, 1489, 1528
TaiI	ACGT	2 cut(s)	178, 233
TaqI	TCGA	3 cut(s)	168, 1128, 1352
TatI	WGTACW	2 cut(s)	435, 1338
TauI	GCSGC	1 cut(s)	96
TfiI	GAWTC	4 cut(s)	462, 1239, 1558, 1570
Tru1I	TTAA	3 cut(s)	365, 1584, 1638
Tru9I	TTAA	3 cut(s)	365, 1584, 1638
TscAI	CASTG	8 cut(s)	352, 957, 1138, 1312, 1479, 1485, 1492, 1500
TseFI	GTSAC	4 cut(s)	193, 952, 1476, 1687
TseI	GCWGC	3 cut(s)	200, 755, 890
Tsp45I	GTSAC	4 cut(s)	193, 952, 1476, 1687
TspDTI	ATGAA	5 cut(s)	468, 519, 629, 1369, 1399
TspGWI	ACGGA	1 cut(s)	1246
TspRI	CASTG	8 cut(s)	352, 957, 1138, 1312, 1479, 1485, 1492, 1500
Tth111I	GACNNNGTC	1 cut(s)	1133
Van91I	CCANNNNNTGG	1 cut(s)	1084
VpaK11BI	GGWCC	1 cut(s)	1366
VspI	ATTAAT	1 cut(s)	1638
XceI	RCATGY	2 cut(s)	93, 562
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1264, 1492
XhoI	CTCGAG	1 cut(s)	167
XmiI	GTMKAC	1 cut(s)	1029
XspI	CTAG	6 cut(s)	155, 263, 1073, 1247, 1334, 1520
Zsp2I	ATGCAT	1 cut(s)	274

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.