MD05G1059400.v1.1

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0002209
Physical Location & Seq
Forward (+)
10377671 .. 10382638
4968 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1059400.v1.1.491

Sequence Viewer

Length: 1497 bp
ATGGCGGAAAAAAGCGGCGACGGCGACGGCAGCGGTGGGGGTGACGGTGCTCCAGCAGAGGAGGAGAAGAAGAAGAATAATCATGCTGATGGTGGTGTTCCACCAGAGAAAGAGAAGAATGGAGATCCAGAACTGCTGATCTGCTTGCTTCAACCTGCTCCCGCCGACTCCGATCCTGACTACATCGGCATCCGTCGCCTTCTCCTCTCTCGCAAGCCCCAGTCCCCATTTCATCGCCGCCTAGATTGGAGATGCAATGGAAAAGGGTACGTCGCGTTTCGAAATTACATCCGTCGGCCAAGGAATTGGGAGAGTACGCAGACTCCGAGCCTCCAGACCACTCCCGGGAACAGTGGGCGATGGATTCCACCTCCAAGTCCGCGGTCCCTTTTGTATGATGTCGAAGGCTGGAGTCCTGGCAGAGACGTCCAGAGTGGCAGTCAACCTTCACCTCGCAGAAGTTTTGGCTCCAGTATAAGTGATAGTGACCGCCCACGTCCTCAACGGGCAGAACCTGCATACTCATTCGTAGGAATGCAGTGCATCTTTGATCAGTGCAAAGCCTCTGTCACGGTTTTGAAGTTTGGACACATGAGTTCTGATCTGCTTGCATATGGAGCATCAGATGGAACCTTGACAGTATGCACTGTTTCTGATCCACCTTCAATCCTCAAGCAGCTGCATGGTCACTCCAAAGATGTTACAGACTTCGATTTTTCATCAAACAATCAATACATTGCATCCTCATCAATGGATAAAACTGTACGAGTGTGGGAGATTTCAAAAGGCCTTTGCATTCGAGTAATATATGGAGTGTCTCCACAACTATGTATTCGTTTCCACCCTGTAAATAACAACTTTCTTTCAGTTGGCAATGCAGACAAAGAAGTCACGGTTTTCAATTTCAGCACTGGAAGGGTCATTCATAAAATATTCTTTGACAGTGAGGTTACCTCCATGGATTATGCTCACACTGGACAGCTCATTTTCTGTGGTGATGCGGCGGGGTGTATATATTCTGTAAGTATGAATTCTCACACAGGAATGTTGTCTCGCTCTCATCGTCACCGAAGTAGCACAAGGCGAAAATCTCCAGTCACAACTGTGCAGTACCGAAGTTTTTCTCTGTTGGCTCGAGGCCCTGTCTTGCTTACGTGTACTCAAGATGGAAGTTTATCTTTCTTCAGTGTTGCTCTGGACATACAGGGTTATTTGACTCTCCGTTGCTCACTGAAACTAAATCCACGAATATACAGCATCCGGGCTTCCTTCTGTCCTCTGCTTTCCCTTGAAAAAGGAGAATATATAGTTTCCGGAAGTGAGGATTCAAATGTCTACTTCTATGATTTAACTCGGCCAAAGCATACTTGTGTAAACAAGCTACAGGGTCATCGATTTCCGGTTATTGGTGTTGCTTGGAACCATGGAGAGAACTTGTTAGCATCATCTGATTTCTACGGAACGGTTATTGTATGGAAGAGATCAAAGACAGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

499

Amino Acids

55.13

Weight (kDa)

8.99

Isoelectric Point (pI)

51.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR3_1st PF25173 180 - 271 4.4e-14 WDR3 first beta-propeller domain
WD40_MABP1-WDR62_2nd PF24782 182 - 339 6.7e-08 MABP1/WDR62 second WD40 domain
Beta-prop_EML_2 PF23414 184 - 263 3.6e-09 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5 PF25175 185 - 493 3.5e-35 WDR5 beta-propeller domain
WD40_WDHD1_1st PF24817 185 - 270 6.9e-12 WDHD1 first WD40 domain
Beta-prop_WDR36-Utp21_2nd PF25168 186 - 303 1.8e-12 WDR36/Utp21 second beta-propeller domain
WD40_Prp19 PF24814 187 - 339 5.1e-15 Prp19 WD40 domain
WD40_CDC20-Fz PF24807 190 - 334 5.7e-15 CDC20/Fizzy WD40 domain
WDR55 PF24796 197 - 261 5.2e-06 WDR55
Beta-prop_THOC3 PF25174 199 - 357 1.2e-21 THOC3 beta-propeller domain
Beta-prop_CAF1B_HIR1 PF24105 223 - 312 2.4e-09 CAF1B/HIR1 beta-propeller domain
WD40 PF00400 224 - 258 1.2e-10 WD domain, G-beta repeat
Beta-prop_WDR3_2nd PF25172 233 - 327 1.2e-07 WDR3 second beta-propeller domain
Beta-prop_WDR3_2nd PF25172 233 - 339 3.2e-08 WDR3 second beta-propeller domain
Beta-prop_WDR90_POC16_2nd PF23393 244 - 347 7.4e-06 WDR90/POC16, second beta-propeller
Beta-prop_RIG_2nd PF23775 245 - 494 2.1e-07 RIG second beta-propeller
Beta-prop_EML_2 PF23414 279 - 402 8.9e-07 Echinoderm microtubule-associated protein second beta-propeller
WD40_CDC20-Fz PF24807 363 - 496 6.4e-10 CDC20/Fizzy WD40 domain
WD40_WDHD1_1st PF24817 431 - 495 1.4e-06 WDHD1 first WD40 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 887
AatII GACGTC 1 cut(s) 429
Acc36I ACCTGC 2 cut(s) 163, 523
AccI GTMKAC 1 cut(s) 1335
AccII CGCG 2 cut(s) 275, 382
AccIII TCCGGA 1 cut(s) 1313
AclWI GGATC 3 cut(s) 119, 167, 650
AcoI YGGCCR 2 cut(s) 296, 1355
AcsI RAATTY 1 cut(s) 1030
AcuI CTGAAG 1 cut(s) 1168
AcyI GRCGYC 1 cut(s) 426
AfaI GTAC 5 cut(s) 269, 316, 765, 1112, 1159
AfiI CCNNNNNNNGG 2 cut(s) 345, 1406
AflIII ACRYGT 1 cut(s) 1154
AgsI TTSAA 7 cut(s) 152, 580, 666, 783, 901, 1292, 1329
AjiI CACGTC 1 cut(s) 497
AjnI CCWGG 1 cut(s) 415
AleI CACNNNNGTG 1 cut(s) 1103
AluBI AGCT 3 cut(s) 679, 982, 1381
AluI AGCT 3 cut(s) 679, 982, 1381
Alw21I GWGCWC 1 cut(s) 52
Alw26I GTCTC 3 cut(s) 417, 822, 1056
AlwI GGATC 3 cut(s) 119, 167, 650
AlwNI CAGNNNCTG 1 cut(s) 515
Ama87I CYCGRG 2 cut(s) 344, 1134
Aor13HI TCCGGA 1 cut(s) 1313
AoxI GGCC 4 cut(s) 296, 787, 1138, 1355
ApeKI GCWGC 3 cut(s) 30, 676, 679
ApoI RAATTY 1 cut(s) 1030
ArsI GACNNNNNNTTYG 2 cut(s) 552, 584
Asp700I GAANNNNTTC 1 cut(s) 1120
AspS9I GGNCC 2 cut(s) 384, 1139
AsuC2I CCSGG 3 cut(s) 345, 346, 1262
AsuHPI GGTGA 4 cut(s) 53, 441, 1007, 1058
AsuII TTCGAA 1 cut(s) 280
AvaI CYCGRG 2 cut(s) 344, 1134
AvaII GGWCC 1 cut(s) 384
Bbv12I GWGCWC 1 cut(s) 52
BbvI GCAGC 3 cut(s) 42, 666, 688
BccI CCATC 4 cut(s) 83, 354, 620, 1160
BceAI ACGGC 2 cut(s) 37, 43
BciT130I CCWGG 1 cut(s) 417
BclI TGATCA 1 cut(s) 550
BcnI CCSGG 3 cut(s) 345, 346, 1262
BcoDI GTCTC 3 cut(s) 417, 822, 1056
BfaI CTAG 1 cut(s) 242
BfmI CTRYAG 1 cut(s) 1382
BfuAI ACCTGC 2 cut(s) 163, 523
BisI GCNGC 6 cut(s) 16, 31, 238, 677, 680, 1002
BlsI GCNGC 6 cut(s) 17, 32, 239, 678, 681, 1003
Bme1390I CCNGG 4 cut(s) 345, 346, 417, 1262
Bme18I GGWCC 1 cut(s) 384
BmeT110I CYCGRG 2 cut(s) 344, 1134
BmgBI CACGTC 1 cut(s) 497
BmgT120I GGNCC 2 cut(s) 384, 1139
BmiI GGNNCC 4 cut(s) 386, 469, 631, 1421
BmrFI CCNGG 4 cut(s) 345, 346, 417, 1262
BmrI ACTGGG 1 cut(s) 214
BmsI GCATC 8 cut(s) 198, 242, 552, 629, 749, 988, 1266, 1451
BmuI ACTGGG 1 cut(s) 214
BplI GAGNNNNNCTC 2 cut(s) 938, 970
BpmI CTGGAG 5 cut(s) 36, 317, 430, 454, 1077
Bpu14I TTCGAA 1 cut(s) 280
BpuEI CTTGAG 2 cut(s) 656, 1146
BpuMI CCSGG 3 cut(s) 345, 346, 1262
Bsa29I ATCGAT 1 cut(s) 1393
BsaAI YACGTR 1 cut(s) 1155
BsaHI GRCGYC 1 cut(s) 426
BsaJI CCNNGG 5 cut(s) 299, 344, 380, 957, 1423
BsaWI WCCGGW 2 cut(s) 1313, 1399
BsaXI ACNNNNNCTCC 2 cut(s) 307, 337
Bsc4I CCNNNNNNNGG 2 cut(s) 345, 1406
Bse1I ACTGG 5 cut(s) 220, 471, 916, 979, 1094
Bse3DI GCAATG 3 cut(s) 262, 735, 880
BseAI TCCGGA 1 cut(s) 1313
BseBI CCWGG 1 cut(s) 417
BseCI ATCGAT 1 cut(s) 1393
BseDI CCNNGG 5 cut(s) 299, 344, 380, 957, 1423
BseGI GGATG 4 cut(s) 189, 288, 740, 1257
BseLI CCNNNNNNNGG 2 cut(s) 345, 1406
BseMI GCAATG 3 cut(s) 262, 735, 880
BseNI ACTGG 5 cut(s) 220, 471, 916, 979, 1094
BseRI GAGGAG 3 cut(s) 74, 77, 194
BseXI GCAGC 3 cut(s) 42, 666, 688
BsgI GTGCAG 1 cut(s) 1127
Bsh1236I CGCG 2 cut(s) 275, 382
BshFI GGCC 4 cut(s) 298, 789, 1140, 1357
BshVI ATCGAT 1 cut(s) 1393
BsiHKAI GWGCWC 1 cut(s) 52
BsiHKCI CYCGRG 2 cut(s) 344, 1134
BsiSI CCGG 4 cut(s) 345, 1261, 1314, 1400
BslFI GGGAC 2 cut(s) 208, 370
BslI CCNNNNNNNGG 2 cut(s) 345, 1406
BsmAI GTCTC 3 cut(s) 417, 822, 1056
BsmBI CGTCTC 1 cut(s) 417
BsmFI GGGAC 2 cut(s) 208, 370
BsmI GAATGC 2 cut(s) 540, 795
BsnI GGCC 4 cut(s) 298, 789, 1140, 1357
BsoBI CYCGRG 2 cut(s) 344, 1134
Bsp119I TTCGAA 1 cut(s) 280
Bsp1286I GDGCHC 1 cut(s) 52
Bsp13I TCCGGA 1 cut(s) 1313
Bsp143I GATC 7 cut(s) 124, 138, 172, 550, 601, 655, 1481
Bsp19I CCATGG 2 cut(s) 957, 1423
BspANI GGCC 4 cut(s) 298, 789, 1140, 1357
BspDI ATCGAT 1 cut(s) 1393
BspEI TCCGGA 1 cut(s) 1313
BspFNI CGCG 2 cut(s) 275, 382
BspLI GGNNCC 4 cut(s) 386, 469, 631, 1421
BspMI ACCTGC 2 cut(s) 163, 523
BspPI GGATC 3 cut(s) 119, 167, 650
BspT104I TTCGAA 1 cut(s) 280
BsrDI GCAATG 3 cut(s) 262, 735, 880
BsrI ACTGG 5 cut(s) 220, 471, 916, 979, 1094
BssECI CCNNGG 5 cut(s) 299, 344, 380, 957, 1423
BssMI GATC 7 cut(s) 124, 138, 172, 550, 601, 655, 1481
BssNI GRCGYC 1 cut(s) 426
BssT1I CCWWGG 3 cut(s) 299, 957, 1423
Bst2UI CCWGG 1 cut(s) 417
Bst6I CTCTTC 1 cut(s) 1472
BstACI GRCGYC 1 cut(s) 426
BstAPI GCANNNNNTGC 1 cut(s) 515
BstBAI YACGTR 1 cut(s) 1155
BstBI TTCGAA 1 cut(s) 280
BstC8I GCNNGC 3 cut(s) 146, 215, 609
BstDSI CCRYGG 3 cut(s) 380, 957, 1423
BstEII GGTNACC 1 cut(s) 949
BstF5I GGATG 4 cut(s) 189, 288, 740, 1257
BstFNI CGCG 2 cut(s) 275, 382
BstKTI GATC 7 cut(s) 127, 141, 175, 553, 604, 658, 1484
BstMAI GTCTC 3 cut(s) 417, 822, 1056
BstMBI GATC 7 cut(s) 124, 138, 172, 550, 601, 655, 1481
BstMWI GCNNNNNNNGC 5 cut(s) 21, 30, 195, 515, 617
BstNI CCWGG 1 cut(s) 417
BstPI GGTNACC 1 cut(s) 949
BstSCI CCNGG 4 cut(s) 343, 344, 415, 1260
BstSFI CTRYAG 1 cut(s) 1382
BstUI CGCG 2 cut(s) 275, 382
BstV1I GCAGC 3 cut(s) 42, 666, 688
BstX2I RGATCY 1 cut(s) 124
BstXI CCANNNNNNTGG 1 cut(s) 306
BstYI RGATCY 1 cut(s) 124
Bsu15I ATCGAT 1 cut(s) 1393
BsuRI GGCC 4 cut(s) 298, 789, 1140, 1357
BsuTUI ATCGAT 1 cut(s) 1393
BtgI CCRYGG 3 cut(s) 380, 957, 1423
BtgZI GCGATG 2 cut(s) 218, 373
BtrI CACGTC 1 cut(s) 497
BtsCI GGATG 4 cut(s) 189, 288, 740, 1257
BtsI GCAGTG 1 cut(s) 545
BtsIMutI CAGTG 9 cut(s) 358, 545, 560, 645, 909, 949, 972, 1192, 1229
BveI ACCTGC 2 cut(s) 163, 523
Cac8I GCNNGC 3 cut(s) 146, 215, 609
CaiI CAGNNNCTG 1 cut(s) 515
Cfr13I GGNCC 2 cut(s) 384, 1139
Cfr42I CCGCGG 1 cut(s) 383
Cfr9I CCCGGG 1 cut(s) 344
ClaI ATCGAT 1 cut(s) 1393
Csp6I GTAC 5 cut(s) 268, 315, 764, 1111, 1158
CviAII CATG 5 cut(s) 83, 592, 683, 958, 1424
CviQI GTAC 5 cut(s) 268, 315, 764, 1111, 1158
DpnI GATC 7 cut(s) 126, 140, 174, 552, 603, 657, 1483
DpnII GATC 7 cut(s) 124, 138, 172, 550, 601, 655, 1481
DrdI GACNNNNNNGTC 1 cut(s) 887
DseDI GACNNNNNNGTC 1 cut(s) 887
EaeI YGGCCR 2 cut(s) 296, 1355
Eam1104I CTCTTC 1 cut(s) 1472
EarI CTCTTC 1 cut(s) 1472
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 3 cut(s) 299, 957, 1423
Eco147I AGGCCT 1 cut(s) 789
Eco47I GGWCC 1 cut(s) 384
Eco57I CTGAAG 1 cut(s) 1168
Eco88I CYCGRG 2 cut(s) 344, 1134
Eco91I GGTNACC 1 cut(s) 949
EcoO109I RGGNCCY 1 cut(s) 1139
EcoO65I GGTNACC 1 cut(s) 949
EcoRI GAATTC 1 cut(s) 1030
EcoRII CCWGG 1 cut(s) 415
EcoT14I CCWWGG 3 cut(s) 299, 957, 1423
ErhI CCWWGG 3 cut(s) 299, 957, 1423
Esp3I CGTCTC 1 cut(s) 417
FaeI CATG 5 cut(s) 86, 595, 686, 961, 1427
FalI AAGNNNNNCTT 2 cut(s) 1162, 1194
FaqI GGGAC 2 cut(s) 208, 370
FatI CATG 5 cut(s) 82, 591, 682, 957, 1423
FauI CCCGC 2 cut(s) 169, 997
FauNDI CATATG 1 cut(s) 613
FbaI TGATCA 1 cut(s) 550
FblI GTMKAC 1 cut(s) 1335
Fnu4HI GCNGC 6 cut(s) 16, 31, 238, 677, 680, 1002
FokI GGATG 4 cut(s) 176, 275, 727, 1244
Fsp4HI GCNGC 6 cut(s) 16, 31, 238, 677, 680, 1002
FspBI CTAG 1 cut(s) 242
GluI GCNGC 6 cut(s) 16, 31, 238, 677, 680, 1002
GsuI CTGGAG 5 cut(s) 36, 317, 430, 454, 1077
HaeIII GGCC 4 cut(s) 298, 789, 1140, 1357
HapII CCGG 4 cut(s) 345, 1261, 1314, 1400
Hin1I GRCGYC 1 cut(s) 426
Hin1II CATG 5 cut(s) 86, 595, 686, 961, 1427
HincII GTYRAC 1 cut(s) 443
HindII GTYRAC 1 cut(s) 443
HinfI GANTC 6 cut(s) 167, 322, 364, 412, 1216, 1325
HpaII CCGG 4 cut(s) 345, 1261, 1314, 1400
HphI GGTGA 4 cut(s) 53, 441, 1007, 1058
Hpy166II GTNNAC 4 cut(s) 443, 1158, 1336, 1375
Hpy188I TCNGA 6 cut(s) 172, 327, 601, 625, 655, 1450
Hpy188III TCNNGA 7 cut(s) 128, 176, 334, 430, 1163, 1196, 1314
Hpy8I GTNNAC 4 cut(s) 443, 1158, 1336, 1375
Hpy99I CGWCG 5 cut(s) 23, 29, 198, 275, 297
HpyAV CCTTC 6 cut(s) 209, 398, 456, 672, 909, 1279
HpyCH4IV ACGT 4 cut(s) 270, 426, 496, 1154
HpyF10VI GCNNNNNNNGC 5 cut(s) 21, 30, 195, 515, 617
HpySE526I ACGT 4 cut(s) 270, 426, 496, 1154
Hsp92I GRCGYC 1 cut(s) 426
Hsp92II CATG 5 cut(s) 86, 595, 686, 961, 1427
Kpn2I TCCGGA 1 cut(s) 1313
Ksp22I TGATCA 1 cut(s) 550
KspI CCGCGG 1 cut(s) 383
Kzo9I GATC 7 cut(s) 124, 138, 172, 550, 601, 655, 1481
LmnI GCTCC 4 cut(s) 55, 163, 473, 617
Lsp1109I GCAGC 3 cut(s) 42, 666, 688
LweI GCATC 8 cut(s) 198, 242, 552, 629, 749, 988, 1266, 1451
MaeI CTAG 1 cut(s) 242
MaeII ACGT 4 cut(s) 270, 426, 496, 1154
MaeIII GTNAC 9 cut(s) 41, 485, 568, 686, 700, 889, 949, 1064, 1096
MalI GATC 7 cut(s) 126, 140, 174, 552, 603, 657, 1483
MboI GATC 7 cut(s) 124, 138, 172, 550, 601, 655, 1481
MboII GAAGA 6 cut(s) 79, 82, 85, 127, 1174, 1489
MflI RGATCY 1 cut(s) 124
MhlI GDGCHC 1 cut(s) 52
MluCI AATT 4 cut(s) 283, 304, 901, 1030
MlyI GAGTC 4 cut(s) 161, 316, 421, 1210
MroI TCCGGA 1 cut(s) 1313
MroXI GAANNNNTTC 1 cut(s) 1120
MseI TTAA 2 cut(s) 1349, 1495
MslI CAYNNNNRTG 5 cut(s) 87, 826, 1043, 1103, 1368
MspA1I CMGCKG 3 cut(s) 33, 382, 679
MspI CCGG 4 cut(s) 345, 1261, 1314, 1400
MspR9I CCNGG 4 cut(s) 345, 346, 417, 1262
Mva1269I GAATGC 2 cut(s) 540, 795
MvaI CCWGG 1 cut(s) 417
MvnI CGCG 2 cut(s) 275, 382
MwoI GCNNNNNNNGC 5 cut(s) 21, 30, 195, 515, 617
NciI CCSGG 3 cut(s) 345, 346, 1262
NcoI CCATGG 2 cut(s) 957, 1423
NdeI CATATG 1 cut(s) 613
NdeII GATC 7 cut(s) 124, 138, 172, 550, 601, 655, 1481
NlaIII CATG 5 cut(s) 86, 595, 686, 961, 1427
NlaIV GGNNCC 4 cut(s) 386, 469, 631, 1421
NmeAIII GCCGAG 1 cut(s) 1333
NmuCI GTSAC 7 cut(s) 41, 485, 568, 686, 889, 1064, 1096
NspV TTCGAA 1 cut(s) 280
OliI CACNNNNGTG 1 cut(s) 1103
PaeR7I CTCGAG 1 cut(s) 1134
PceI AGGCCT 1 cut(s) 789
PcsI WCGNNNNNNNCGW 2 cut(s) 323, 1060
PctI GAATGC 2 cut(s) 540, 795
PdmI GAANNNNTTC 1 cut(s) 1120
PfeI GAWTC 2 cut(s) 364, 1325
PkrI GCNGC 6 cut(s) 17, 32, 239, 678, 681, 1003
PleI GAGTC 4 cut(s) 161, 316, 420, 1210
PpsI GAGTC 4 cut(s) 161, 316, 420, 1210
Ppu21I YACGTR 1 cut(s) 1155
Psp6I CCWGG 1 cut(s) 415
PspEI GGTNACC 1 cut(s) 949
PspGI CCWGG 1 cut(s) 415
PspN4I GGNNCC 4 cut(s) 386, 469, 631, 1421
PspPI GGNCC 2 cut(s) 384, 1139
PspXI VCTCGAGB 1 cut(s) 1134
PstNI CAGNNNCTG 1 cut(s) 515
PsuI RGATCY 1 cut(s) 124
PvuII CAGCTG 1 cut(s) 679
RsaI GTAC 5 cut(s) 269, 316, 765, 1112, 1159
RsaNI GTAC 5 cut(s) 268, 315, 764, 1111, 1158
RseI CAYNNNNRTG 5 cut(s) 87, 826, 1043, 1103, 1368
SacII CCGCGG 1 cut(s) 383
SaqAI TTAA 2 cut(s) 1349, 1495
SatI GCNGC 6 cut(s) 16, 31, 238, 677, 680, 1002
Sau3AI GATC 7 cut(s) 124, 138, 172, 550, 601, 655, 1481
Sau96I GGNCC 2 cut(s) 384, 1139
SchI GAGTC 4 cut(s) 161, 316, 421, 1210
ScrFI CCNGG 4 cut(s) 345, 346, 417, 1262
SduI GDGCHC 1 cut(s) 52
SfaNI GCATC 8 cut(s) 198, 242, 552, 629, 749, 988, 1266, 1451
SfcI CTRYAG 1 cut(s) 1382
Sfr274I CTCGAG 1 cut(s) 1134
Sfr303I CCGCGG 1 cut(s) 383
SfuI TTCGAA 1 cut(s) 280
SgrBI CCGCGG 1 cut(s) 383
SinI GGWCC 1 cut(s) 384
SlaI CTCGAG 1 cut(s) 1134
SmaI CCCGGG 1 cut(s) 346
SmiMI CAYNNNNRTG 5 cut(s) 87, 826, 1043, 1103, 1368
SmlI CTYRAG 3 cut(s) 671, 1134, 1161
SmoI CTYRAG 3 cut(s) 671, 1134, 1161
Sse9I AATT 4 cut(s) 283, 304, 901, 1030
SseBI AGGCCT 1 cut(s) 789
SspI AATATT 1 cut(s) 933
SspMI CTAG 1 cut(s) 242
StuI AGGCCT 1 cut(s) 789
StyD4I CCNGG 4 cut(s) 343, 344, 415, 1260
StyI CCWWGG 3 cut(s) 299, 957, 1423
TaiI ACGT 4 cut(s) 273, 429, 499, 1157
TaqI TCGA 6 cut(s) 280, 402, 711, 799, 1135, 1393
TasI AATT 4 cut(s) 283, 304, 901, 1030
TatI WGTACW 1 cut(s) 1157
TauI GCSGC 3 cut(s) 18, 240, 1004
TfiI GAWTC 2 cut(s) 364, 1325
Tru1I TTAA 2 cut(s) 1349, 1495
Tru9I TTAA 2 cut(s) 1349, 1495
TscAI CASTG 9 cut(s) 358, 545, 560, 652, 916, 949, 979, 1192, 1236
TseFI GTSAC 7 cut(s) 41, 485, 568, 686, 889, 1064, 1096
TseI GCWGC 3 cut(s) 30, 676, 679
Tsp45I GTSAC 7 cut(s) 41, 485, 568, 686, 889, 1064, 1096
TspDTI ATGAA 4 cut(s) 221, 708, 914, 1043
TspGWI ACGGA 4 cut(s) 182, 281, 1211, 1473
TspMI CCCGGG 1 cut(s) 344
TspRI CASTG 9 cut(s) 358, 545, 560, 652, 916, 949, 979, 1192, 1236
VpaK11BI GGWCC 1 cut(s) 384
XapI RAATTY 1 cut(s) 1030
XhoI CTCGAG 1 cut(s) 1134
XmaI CCCGGG 1 cut(s) 344
XmiI GTMKAC 1 cut(s) 1335
XmnI GAANNNNTTC 1 cut(s) 1120
XspI CTAG 1 cut(s) 242
ZraI GACGTC 1 cut(s) 427
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.