RLG00000014092

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0002209
Physical Location & Seq
Forward (+)
46968794 .. 46973736
4943 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014092

Sequence Viewer

Length: 1521 bp
ATGGCGGACAAAAATGGCGGTGGCGATCCACCAGCTGAGGAGGAAGAGGAGGAAGACAAGAACCACGGTGGCGCTGACGGCGGTGCTTCACCGCAAGAAACAGACGACGACGGCGAGAAGAAGAAGAAGAAGAAGCATTCAGATCCGGAGCTGCTGATGTGCTTGCTCCAACCTTGTCCCGCAGACTCCGATCCCGAATACATCGGCATTCGTCGCCTTCTTCTCTCTCGCAAGTCTCAGTCCTCCATTCTTCGCCGCCTAGATTGGAGATGCAATGGTAAGGGCTACGTGGCGTTCCGGAATTACATTCGGAGGCCGAGGAATTGGGAGAAGGATAGTCTGCGGACTCCGAGCCTTCAGACCACTCCGGGAAACAGTGGGCGATGGATTCAACCTCCGAGTCCACTCTCACTTTTGTGTGACGTCGAGAGCTGGACTCCTGGCAGGGATGTGCATAATGGCAGTCAACCTTCATCTCGTAGAAGTTTTGGCTCGAGTACTAGTGATAATGACCGCCTGCGTCAACGGGGTGAACAGCCTGCATACTCTTTTGTAGGAATGCATTGCATCTTTGATCAGTGCAGAGCCTCGGTTACTGTTTTGAAGTTTGGGCACATGAGCTCAGATTTGCTTGCGTATGGATCATCAGATGGAACCTTGACAGTATGCACTGTCTCCGATCCTCCTTCAATTCTCAAGCATCTGAATGGTCACTCCAAAGATGTTACAGACTTTGATTTCTCATCAAACAATCAGTACATTGCATCCTCATCGGTGGATAAAACTGTGAGAGTATGGGAGATTTCAAAAGGCCTATGCATAAGAGTAATATATGGAGTTTCTCCACAACTGTGTATTCGTTTTCACCCTGTAAATAACAACTTCCTTTCAGTTGGCAATGCAGACAAAGAAATTACGGTTTTCAATTTCAGTACTGGGAGGACCATTCATAAAACATCATTTGACAGTCAAGTTACCGCTATGGACCATGCTCACACTGGACAGATCATTTTCTGTGGAGATGGGACGGGGTGTATATATTCTGTCAGTATGAATTCCCACACTGGAGTATTATCCCGCTCTCATCGGCATCGAAGTAGCAGCAGGCAGAAATCTCCAGTCATAACTGTGGAGTACCGAAGTTTTTCTCTGTTGGCTCGGGGCCCTGTGTTGCTGACATGTACTCAAGATGGAAGTTTGTCTTTCTTCAGTGTTGCGCTGGAAATACAAGGTTATTTGACTCTTCGTTGCTCACTCAAATTAACTCCACGAATATACAATATCCGGGCTTCCTTTTGTCCTCTGCTTTCCCTTGAAAAAGGAGAATATATAGTTGCCGGAAGTGAAGATTCAAATGTCTATTTCTACGACTTAACTCGGCCAAAGCATACATGTGTAAACAAGCTACAGGGTCATCGATTTCCTGTTATTGGGGTTGCTTGGAACCATGGAGAGAACTTATTAGCATCATCTGATTTCTATGGTACGGTTATTGTATGGAAGAGATCAAAGGCAGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

507

Amino Acids

56.19

Weight (kDa)

8.62

Isoelectric Point (pI)

53.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR3_1st PF25173 188 - 279 3.8e-14 WDR3 first beta-propeller domain
WD40_MABP1-WDR62_2nd PF24782 192 - 347 7.6e-06 MABP1/WDR62 second WD40 domain
Beta-prop_EML_2 PF23414 192 - 271 3.4e-09 Echinoderm microtubule-associated protein second beta-propeller
WD40_WDHD1_1st PF24817 193 - 363 1.1e-14 WDHD1 first WD40 domain
Beta-prop_WDR5 PF25175 194 - 501 1.5e-33 WDR5 beta-propeller domain
WDR55 PF24796 194 - 404 2.6e-11 WDR55
Beta-prop_WDR36-Utp21_2nd PF25168 197 - 312 1.3e-11 WDR36/Utp21 second beta-propeller domain
WD40_Prp19 PF24814 197 - 354 9.4e-15 Prp19 WD40 domain
WD40_CDC20-Fz PF24807 200 - 372 4.3e-16 CDC20/Fizzy WD40 domain
Beta-prop_THOC3 PF25174 207 - 358 3e-22 THOC3 beta-propeller domain
Beta-prop_CAF1B_HIR1 PF24105 231 - 325 9.7e-10 CAF1B/HIR1 beta-propeller domain
WD40 PF00400 232 - 266 4.8e-10 WD domain, G-beta repeat
Beta-prop_EML PF23409 233 - 487 1.7e-06 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR3_2nd PF25172 241 - 342 1.1e-07 WDR3 second beta-propeller domain
Beta-prop_RIG_2nd PF23775 254 - 502 9.3e-07 RIG second beta-propeller
WD40_WDHD1_1st PF24817 439 - 503 6.6e-07 WDHD1 first WD40 domain
WD40_CDC20-Fz PF24807 440 - 504 4.3e-09 CDC20/Fizzy WD40 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 426
Acc36I ACCTGC 1 cut(s) 1505
AccBSI CCGCTC 1 cut(s) 1080
AccIII TCCGGA 2 cut(s) 145, 297
AclWI GGATC 5 cut(s) 20, 137, 185, 649, 674
AcoI YGGCCR 1 cut(s) 1379
AcsI RAATTY 1 cut(s) 1054
AcuI CTGAAG 2 cut(s) 341, 1192
AcyI GRCGYC 1 cut(s) 423
AfaI GTAC 6 cut(s) 499, 758, 934, 1136, 1183, 1486
AfiI CCNNNNNNNGG 1 cut(s) 1430
AflIII ACRYGT 2 cut(s) 1178, 1391
AgsI TTSAA 7 cut(s) 392, 604, 690, 807, 925, 1316, 1353
AhlI ACTAGT 1 cut(s) 500
AjnI CCWGG 1 cut(s) 439
AleI CACNNNNGTG 2 cut(s) 415, 850
AluBI AGCT 5 cut(s) 35, 151, 432, 621, 1405
AluI AGCT 5 cut(s) 35, 151, 432, 621, 1405
Alw21I GWGCWC 1 cut(s) 623
Alw26I GTCTC 2 cut(s) 240, 679
AlwI GGATC 5 cut(s) 20, 137, 185, 649, 674
Ama87I CYCGRG 2 cut(s) 493, 1158
Aor13HI TCCGGA 2 cut(s) 145, 297
AoxI GGCC 4 cut(s) 314, 811, 1162, 1379
ApaI GGGCCC 1 cut(s) 1166
ApeKI GCWGC 2 cut(s) 151, 1101
ApoI RAATTY 1 cut(s) 1054
Asp700I GAANNNNTTC 1 cut(s) 1144
AspLEI GCGC 2 cut(s) 74, 1219
AspS9I GGNCC 4 cut(s) 942, 985, 1162, 1163
AsuC2I CCSGG 2 cut(s) 369, 1286
AsuHPI GGTGA 3 cut(s) 81, 542, 857
AvaI CYCGRG 2 cut(s) 493, 1158
AvaII GGWCC 2 cut(s) 942, 985
BaeGI GKGCMC 2 cut(s) 615, 1166
BanII GRGCYC 2 cut(s) 623, 1166
BbsI GAAGAC 1 cut(s) 60
Bbv12I GWGCWC 1 cut(s) 623
BbvCI CCTCAGC 1 cut(s) 36
BbvI GCAGC 2 cut(s) 138, 1113
BccI CCATC 4 cut(s) 378, 644, 1016, 1184
BceAI ACGGC 2 cut(s) 94, 127
BcgI CGANNNNNNTGC 2 cut(s) 753, 787
BciT130I CCWGG 1 cut(s) 441
BclI TGATCA 1 cut(s) 574
BcnI CCSGG 2 cut(s) 369, 1286
BcoDI GTCTC 2 cut(s) 240, 679
BcuI ACTAGT 1 cut(s) 500
BfaI CTAG 2 cut(s) 260, 501
BfmI CTRYAG 1 cut(s) 1406
BfoI RGCGCY 1 cut(s) 75
BfuAI ACCTGC 1 cut(s) 1505
BisI GCNGC 3 cut(s) 152, 256, 1102
BlsI GCNGC 3 cut(s) 153, 257, 1103
BmcAI AGTACT 2 cut(s) 499, 934
Bme1390I CCNGG 3 cut(s) 369, 441, 1286
Bme18I GGWCC 2 cut(s) 942, 985
BmeT110I CYCGRG 2 cut(s) 493, 1158
BmgT120I GGNCC 4 cut(s) 942, 985, 1162, 1163
BmiI GGNNCC 4 cut(s) 655, 1163, 1164, 1445
BmrFI CCNGG 3 cut(s) 369, 441, 1286
BmrI ACTGGG 1 cut(s) 945
BmsI GCATC 6 cut(s) 260, 576, 709, 773, 1099, 1475
BmuI ACTGGG 1 cut(s) 945
BpiI GAAGAC 1 cut(s) 60
BplI GAGNNNNNCTC 2 cut(s) 421, 453
BpmI CTGGAG 2 cut(s) 1086, 1101
Bpu10I CCTNAGC 1 cut(s) 36
BpuEI CTTGAG 2 cut(s) 680, 1170
BpuMI CCSGG 2 cut(s) 369, 1286
Bsa29I ATCGAT 1 cut(s) 1417
BsaAI YACGTR 1 cut(s) 289
BsaHI GRCGYC 1 cut(s) 423
BsaJI CCNNGG 4 cut(s) 64, 317, 588, 1447
BsaWI WCCGGW 2 cut(s) 145, 297
Bsc4I CCNNNNNNNGG 1 cut(s) 1430
Bse1I ACTGG 4 cut(s) 940, 1003, 1069, 1118
Bse3DI GCAATG 4 cut(s) 280, 562, 759, 904
BseAI TCCGGA 2 cut(s) 145, 297
BseBI CCWGG 1 cut(s) 441
BseCI ATCGAT 1 cut(s) 1417
BseDI CCNNGG 4 cut(s) 64, 317, 588, 1447
BseGI GGATG 2 cut(s) 454, 764
BseLI CCNNNNNNNGG 1 cut(s) 1430
BseMI GCAATG 4 cut(s) 280, 562, 759, 904
BseMII CTCAG 3 cut(s) 27, 251, 636
BseNI ACTGG 4 cut(s) 940, 1003, 1069, 1118
BseRI GAGGAG 2 cut(s) 53, 62
BseSI GKGCMC 2 cut(s) 615, 1166
BseXI GCAGC 2 cut(s) 138, 1113
BsgI GTGCAG 1 cut(s) 601
BshFI GGCC 4 cut(s) 316, 813, 1164, 1381
BshVI ATCGAT 1 cut(s) 1417
BsiHKAI GWGCWC 1 cut(s) 623
BsiHKCI CYCGRG 2 cut(s) 493, 1158
BsiSI CCGG 5 cut(s) 146, 298, 368, 1285, 1338
BslFI GGGAC 2 cut(s) 162, 1039
BslI CCNNNNNNNGG 1 cut(s) 1430
BsmAI GTCTC 2 cut(s) 240, 679
BsmFI GGGAC 2 cut(s) 162, 1039
BsmI GAATGC 3 cut(s) 136, 207, 564
BsnI GGCC 4 cut(s) 316, 813, 1164, 1381
BsoBI CYCGRG 2 cut(s) 493, 1158
Bsp120I GGGCCC 1 cut(s) 1162
Bsp1286I GDGCHC 3 cut(s) 615, 623, 1166
Bsp13I TCCGGA 2 cut(s) 145, 297
Bsp143I GATC 8 cut(s) 25, 142, 190, 574, 641, 679, 1005, 1505
Bsp19I CCATGG 1 cut(s) 1447
BspANI GGCC 4 cut(s) 316, 813, 1164, 1381
BspCNI CTCAG 3 cut(s) 28, 250, 635
BspDI ATCGAT 1 cut(s) 1417
BspEI TCCGGA 2 cut(s) 145, 297
BspLI GGNNCC 4 cut(s) 655, 1163, 1164, 1445
BspMI ACCTGC 1 cut(s) 1505
BspPI GGATC 5 cut(s) 20, 137, 185, 649, 674
BsrBI CCGCTC 1 cut(s) 1080
BsrDI GCAATG 4 cut(s) 280, 562, 759, 904
BsrI ACTGG 4 cut(s) 940, 1003, 1069, 1118
BssECI CCNNGG 4 cut(s) 64, 317, 588, 1447
BssMI GATC 8 cut(s) 25, 142, 190, 574, 641, 679, 1005, 1505
BssNI GRCGYC 1 cut(s) 423
BssT1I CCWWGG 1 cut(s) 1447
Bst2UI CCWGG 1 cut(s) 441
Bst6I CTCTTC 3 cut(s) 39, 1248, 1496
BstACI GRCGYC 1 cut(s) 423
BstBAI YACGTR 1 cut(s) 289
BstC8I GCNNGC 5 cut(s) 164, 518, 540, 633, 1106
BstDEI CTNAG 3 cut(s) 36, 237, 622
BstDSI CCRYGG 2 cut(s) 64, 1447
BstF5I GGATG 2 cut(s) 454, 764
BstH2I RGCGCY 1 cut(s) 75
BstHHI GCGC 2 cut(s) 74, 1219
BstKTI GATC 8 cut(s) 28, 145, 193, 577, 644, 682, 1008, 1508
BstMAI GTCTC 2 cut(s) 240, 679
BstMBI GATC 8 cut(s) 25, 142, 190, 574, 641, 679, 1005, 1505
BstMWI GCNNNNNNNGC 2 cut(s) 78, 213
BstNI CCWGG 1 cut(s) 441
BstNSI RCATGY 2 cut(s) 1182, 1395
BstSCI CCNGG 3 cut(s) 367, 439, 1284
BstSFI CTRYAG 1 cut(s) 1406
BstSLI GKGCMC 2 cut(s) 615, 1166
BstV1I GCAGC 2 cut(s) 138, 1113
BstV2I GAAGAC 1 cut(s) 60
BstX2I RGATCY 1 cut(s) 142
BstYI RGATCY 1 cut(s) 142
Bsu15I ATCGAT 1 cut(s) 1417
BsuRI GGCC 4 cut(s) 316, 813, 1164, 1381
BsuTUI ATCGAT 1 cut(s) 1417
BtgI CCRYGG 2 cut(s) 64, 1447
BtgZI GCGATG 1 cut(s) 397
BtsCI GGATG 2 cut(s) 454, 764
BtsIMutI CAGTG 6 cut(s) 382, 584, 669, 996, 1062, 1216
BveI ACCTGC 1 cut(s) 1505
Cac8I GCNNGC 5 cut(s) 164, 518, 540, 633, 1106
CfoI GCGC 2 cut(s) 74, 1219
Cfr13I GGNCC 4 cut(s) 942, 985, 1162, 1163
ClaI ATCGAT 1 cut(s) 1417
CseI GACGC 1 cut(s) 509
Csp6I GTAC 6 cut(s) 498, 757, 933, 1135, 1182, 1485
CviAII CATG 5 cut(s) 616, 989, 1179, 1392, 1448
CviQI GTAC 6 cut(s) 498, 757, 933, 1135, 1182, 1485
DdeI CTNAG 3 cut(s) 36, 237, 622
DpnI GATC 8 cut(s) 27, 144, 192, 576, 643, 681, 1007, 1507
DpnII GATC 8 cut(s) 25, 142, 190, 574, 641, 679, 1005, 1505
EaeI YGGCCR 1 cut(s) 1379
Eam1104I CTCTTC 3 cut(s) 39, 1248, 1496
EarI CTCTTC 3 cut(s) 39, 1248, 1496
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 621
Eco130I CCWWGG 1 cut(s) 1447
Eco147I AGGCCT 1 cut(s) 813
Eco24I GRGCYC 2 cut(s) 623, 1166
Eco47I GGWCC 2 cut(s) 942, 985
Eco53kI GAGCTC 1 cut(s) 621
Eco57I CTGAAG 2 cut(s) 341, 1192
Eco88I CYCGRG 2 cut(s) 493, 1158
EcoICRI GAGCTC 1 cut(s) 621
EcoO109I RGGNCCY 2 cut(s) 1162, 1163
EcoRI GAATTC 1 cut(s) 1054
EcoRII CCWGG 1 cut(s) 439
EcoT14I CCWWGG 1 cut(s) 1447
EcoT22I ATGCAT 2 cut(s) 564, 821
EcoT38I GRGCYC 2 cut(s) 623, 1166
ErhI CCWWGG 1 cut(s) 1447
FaeI CATG 5 cut(s) 619, 992, 1182, 1395, 1451
FalI AAGNNNNNCTT 2 cut(s) 1186, 1218
FaqI GGGAC 2 cut(s) 162, 1039
FatI CATG 5 cut(s) 615, 988, 1178, 1391, 1447
FauI CCCGC 2 cut(s) 187, 1085
FbaI TGATCA 1 cut(s) 574
Fnu4HI GCNGC 3 cut(s) 152, 256, 1102
FokI GGATG 2 cut(s) 461, 751
FriOI GRGCYC 2 cut(s) 623, 1166
Fsp4HI GCNGC 3 cut(s) 152, 256, 1102
FspBI CTAG 2 cut(s) 260, 501
GlaI GCGC 2 cut(s) 73, 1218
GluI GCNGC 3 cut(s) 152, 256, 1102
GsuI CTGGAG 2 cut(s) 1086, 1101
HaeII RGCGCY 1 cut(s) 75
HaeIII GGCC 4 cut(s) 316, 813, 1164, 1381
HapII CCGG 5 cut(s) 146, 298, 368, 1285, 1338
HgaI GACGC 1 cut(s) 509
HhaI GCGC 2 cut(s) 74, 1219
Hin1I GRCGYC 1 cut(s) 423
Hin1II CATG 5 cut(s) 619, 992, 1182, 1395, 1451
Hin6I GCGC 2 cut(s) 72, 1217
HinP1I GCGC 2 cut(s) 72, 1217
HincII GTYRAC 2 cut(s) 467, 524
HindII GTYRAC 2 cut(s) 467, 524
HinfI GANTC 7 cut(s) 185, 346, 388, 400, 436, 1240, 1349
HpaII CCGG 5 cut(s) 146, 298, 368, 1285, 1338
HphI GGTGA 3 cut(s) 81, 542, 857
Hpy166II GTNNAC 5 cut(s) 404, 467, 524, 533, 1399
Hpy188III TCNNGA 5 cut(s) 146, 194, 298, 427, 1187
Hpy8I GTNNAC 5 cut(s) 404, 467, 524, 533, 1399
Hpy99I CGWCG 4 cut(s) 110, 113, 216, 428
HpyAV CCTTC 5 cut(s) 227, 325, 365, 480, 696
HpyCH4IV ACGT 2 cut(s) 288, 423
HpyF10VI GCNNNNNNNGC 2 cut(s) 78, 213
HpyF3I CTNAG 3 cut(s) 36, 237, 622
HpySE526I ACGT 2 cut(s) 288, 423
Hsp92I GRCGYC 1 cut(s) 423
Hsp92II CATG 5 cut(s) 619, 992, 1182, 1395, 1451
HspAI GCGC 2 cut(s) 72, 1217
Kpn2I TCCGGA 2 cut(s) 145, 297
Ksp22I TGATCA 1 cut(s) 574
Kzo9I GATC 8 cut(s) 25, 142, 190, 574, 641, 679, 1005, 1505
LmnI GCTCC 2 cut(s) 148, 171
Lsp1109I GCAGC 2 cut(s) 138, 1113
LweI GCATC 6 cut(s) 260, 576, 709, 773, 1099, 1475
MaeI CTAG 2 cut(s) 260, 501
MaeII ACGT 2 cut(s) 288, 423
MaeIII GTNAC 5 cut(s) 419, 592, 710, 724, 973
MalI GATC 8 cut(s) 27, 144, 192, 576, 643, 681, 1007, 1507
MbiI CCGCTC 1 cut(s) 1080
MboI GATC 8 cut(s) 25, 142, 190, 574, 641, 679, 1005, 1505
MflI RGATCY 1 cut(s) 142
MhlI GDGCHC 3 cut(s) 615, 623, 1166
MluCI AATT 7 cut(s) 301, 322, 690, 912, 925, 1054, 1259
MlyI GAGTC 5 cut(s) 179, 340, 409, 430, 1234
MmeI TCCRAC 1 cut(s) 193
Mph1103I ATGCAT 2 cut(s) 564, 821
MroI TCCGGA 2 cut(s) 145, 297
MroXI GAANNNNTTC 1 cut(s) 1144
MseI TTAA 3 cut(s) 1262, 1373, 1519
MslI CAYNNNNRTG 5 cut(s) 415, 705, 850, 1127, 1392
MspA1I CMGCKG 1 cut(s) 35
MspI CCGG 5 cut(s) 146, 298, 368, 1285, 1338
MspR9I CCNGG 3 cut(s) 369, 441, 1286
Mva1269I GAATGC 3 cut(s) 136, 207, 564
MvaI CCWGG 1 cut(s) 441
MwoI GCNNNNNNNGC 2 cut(s) 78, 213
NciI CCSGG 2 cut(s) 369, 1286
NcoI CCATGG 1 cut(s) 1447
NdeII GATC 8 cut(s) 25, 142, 190, 574, 641, 679, 1005, 1505
NlaIII CATG 5 cut(s) 619, 992, 1182, 1395, 1451
NlaIV GGNNCC 4 cut(s) 655, 1163, 1164, 1445
NmeAIII GCCGAG 2 cut(s) 342, 1357
NmuCI GTSAC 2 cut(s) 419, 710
NsiI ATGCAT 2 cut(s) 564, 821
NspI RCATGY 2 cut(s) 1182, 1395
OliI CACNNNNGTG 2 cut(s) 415, 850
PaeR7I CTCGAG 1 cut(s) 493
PceI AGGCCT 1 cut(s) 813
PciI ACATGT 2 cut(s) 1178, 1391
PcsI WCGNNNNNNNCGW 1 cut(s) 111
PctI GAATGC 3 cut(s) 136, 207, 564
PdmI GAANNNNTTC 1 cut(s) 1144
PfeI GAWTC 2 cut(s) 388, 1349
PfoI TCCNGGA 1 cut(s) 367
PkrI GCNGC 3 cut(s) 153, 257, 1103
PleI GAGTC 5 cut(s) 179, 340, 408, 430, 1234
PpsI GAGTC 5 cut(s) 179, 340, 408, 430, 1234
Ppu21I YACGTR 1 cut(s) 289
PscI ACATGT 2 cut(s) 1178, 1391
Psp124BI GAGCTC 1 cut(s) 623
Psp6I CCWGG 1 cut(s) 439
PspGI CCWGG 1 cut(s) 439
PspN4I GGNNCC 4 cut(s) 655, 1163, 1164, 1445
PspOMI GGGCCC 1 cut(s) 1162
PspPI GGNCC 4 cut(s) 942, 985, 1162, 1163
PspXI VCTCGAGB 1 cut(s) 493
PsuI RGATCY 1 cut(s) 142
PvuII CAGCTG 1 cut(s) 35
RsaI GTAC 6 cut(s) 499, 758, 934, 1136, 1183, 1486
RsaNI GTAC 6 cut(s) 498, 757, 933, 1135, 1182, 1485
RseI CAYNNNNRTG 5 cut(s) 415, 705, 850, 1127, 1392
SacI GAGCTC 1 cut(s) 623
SaqAI TTAA 3 cut(s) 1262, 1373, 1519
SatI GCNGC 3 cut(s) 152, 256, 1102
Sau3AI GATC 8 cut(s) 25, 142, 190, 574, 641, 679, 1005, 1505
Sau96I GGNCC 4 cut(s) 942, 985, 1162, 1163
ScaI AGTACT 2 cut(s) 499, 934
SchI GAGTC 5 cut(s) 179, 340, 409, 430, 1234
ScrFI CCNGG 3 cut(s) 369, 441, 1286
SduI GDGCHC 3 cut(s) 615, 623, 1166
SfaNI GCATC 6 cut(s) 260, 576, 709, 773, 1099, 1475
SfcI CTRYAG 1 cut(s) 1406
Sfr274I CTCGAG 1 cut(s) 493
SinI GGWCC 2 cut(s) 942, 985
SlaI CTCGAG 1 cut(s) 493
SmiMI CAYNNNNRTG 5 cut(s) 415, 705, 850, 1127, 1392
SmlI CTYRAG 3 cut(s) 493, 695, 1185
SmoI CTYRAG 3 cut(s) 493, 695, 1185
SpeI ACTAGT 1 cut(s) 500
Sse9I AATT 7 cut(s) 301, 322, 690, 912, 925, 1054, 1259
SseBI AGGCCT 1 cut(s) 813
SspMI CTAG 2 cut(s) 260, 501
SstI GAGCTC 1 cut(s) 623
StuI AGGCCT 1 cut(s) 813
StyD4I CCNGG 3 cut(s) 367, 439, 1284
StyI CCWWGG 1 cut(s) 1447
TaiI ACGT 2 cut(s) 291, 426
TaqI TCGA 4 cut(s) 426, 494, 1093, 1417
TasI AATT 7 cut(s) 301, 322, 690, 912, 925, 1054, 1259
TatI WGTACW 4 cut(s) 497, 756, 932, 1181
TauI GCSGC 1 cut(s) 258
TfiI GAWTC 2 cut(s) 388, 1349
Tru1I TTAA 3 cut(s) 1262, 1373, 1519
Tru9I TTAA 3 cut(s) 1262, 1373, 1519
TscAI CASTG 6 cut(s) 382, 584, 676, 1003, 1069, 1216
TseFI GTSAC 2 cut(s) 419, 710
TseI GCWGC 2 cut(s) 151, 1101
Tsp45I GTSAC 2 cut(s) 419, 710
TspDTI ATGAA 3 cut(s) 462, 938, 1067
TspRI CASTG 6 cut(s) 382, 584, 676, 1003, 1069, 1216
VpaK11BI GGWCC 2 cut(s) 942, 985
XapI RAATTY 1 cut(s) 1054
XceI RCATGY 2 cut(s) 1182, 1395
XcmI CCANNNNNNNNNTGG 1 cut(s) 995
XhoI CTCGAG 1 cut(s) 493
XmnI GAANNNNTTC 1 cut(s) 1144
XspI CTAG 2 cut(s) 260, 501
ZraI GACGTC 1 cut(s) 424
ZrmI AGTACT 2 cut(s) 499, 934
Zsp2I ATGCAT 2 cut(s) 564, 821
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.