RLG00000013961

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0002209
Physical Location & Seq
Forward (+)
44750530 .. 44757419
6890 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013961

Sequence Viewer

Length: 1416 bp
ATGCAACGTTCATATCTCAAGTTCATATTTCAACCTCCGAGTCCGCTCTCACTTTTGTGTGACGTCGAGAGCTGGACTCCTGGCAGGGATGTGCATAGTGGCAGTCAACCTTCATCTCGTAGAAGTTTTGGCTCGAGTACTAGTGATAATGACCGCCTGCGTCGACAGGTTACTGTTTTGAAGTTTTGGCACATGAGCTCAGATCTGCTTGCATATGGAGCATCAGATGGAACCTTGACAGTATGCACTGTCTCTGATCCTCCTTCAATCCTCAAGCATCTGAATGGTCACTCCAAAGATGTTACAGACTTTGAGTTCTCGTCAAACAATCAGTACATTGCTTCCTCATCGGTGGATAAAACTGTGAGAATATGGGAGATTTCAAAAGGCCTATGCATAAGAGTAATATATGGAGTTTCTCCACAACTGTGTATTCGTTTTCACCCTGTAAATAACAACTTCCTTTCAGTTGGCAATGCAAACAAAGAAATTACGGTTTTCAATTTCAGTACTGGGAGGACCATTCATAAAACATCATTTGACAGTCAAGTTACCGCTATGGACCATGCTCACACTGGACAGATCATTTTCTGTGGAGATGGGACGGGGTGTATATATTCTGTCAGTATGAATTCTCACACAGGTGTATTATCCCGCTCTCATCGGCATCGAAGTAGCAGCAGGCAGAAATCTCCAGTCACAACTGTGGAGTACCGAATTTTTTCTCTGTTGGCTCGGGGCCCTGTGTTGCTGACATGTACTCAAGATGGAAGTTTGTCTTTCTTCAGTGTTGCGCTGGAAATACAAGGTTATTTGACTCTTCGTTGCTCACTCAAATTAACTCCACGAATATACAATATCCGGGCTTCCTTTTGTCCTCTGCTTTCCCTTGAAAAAGGAGAATATATAGTTTTTGTTGGAAGTGAAGATTCAAATGTCTACTTCTACGACTTAACTCGGCCAAAGCATACATGTGTAAACAAGCTACAGGGTCATCGATTTCCTGTTATTGGGGTTGCTTGGAATCATGGAGAGAATTTATTAGCATCATCTGATTTCTATGATACGGTTATTGTATGGAAGAGATCAAAGGCAGCTTTCTATTTTCCGATATCGATTTCTCTCCTTTTCTTTTCAATCGCTATGTCAATCAAACCGATCGACATGGCGCCCTCCCTTGGGGACACCGATATGGTTGTCGACGATGGTGCTCCTCTGATGGACATCCAACTCAGTGTGTTTGATCTTTTACCGAATGAGTATTTGGACGACGATGATGTTGTTGAGCGATTTGAGTTTGTTTGGATTGAAAACAAGGATGATTGGAACATGGAGATTGGATATGATGATGATGATGAATTGTGGGATCTGATTATTGATCTACTTATTAATCGACTCGACGGAAGAGTGGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

472

Amino Acids

53.1

Weight (kDa)

5.6

Isoelectric Point (pI)

43.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR5 PF25175 54 - 361 9.9e-31 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 54 - 138 7.7e-13 WDR3 first beta-propeller domain
Beta-prop_EML_2 PF23414 54 - 130 9.9e-08 Echinoderm microtubule-associated protein second beta-propeller
WDR55 PF24796 55 - 263 6.5e-11 WDR55
WD40_WDHD1_1st PF24817 56 - 223 2.2e-14 WDHD1 first WD40 domain
WD40_Prp19 PF24814 57 - 213 4.2e-14 Prp19 WD40 domain
WD40_CDC20-Fz PF24807 58 - 232 5.3e-15 CDC20/Fizzy WD40 domain
Beta-prop_WDR36-Utp21_2nd PF25168 62 - 171 1.4e-11 WDR36/Utp21 second beta-propeller domain
Beta-prop_THOC3 PF25174 63 - 217 4.7e-22 THOC3 beta-propeller domain
Beta-prop_CAF1B_HIR1 PF24105 90 - 184 4e-09 CAF1B/HIR1 beta-propeller domain
WD40 PF00400 91 - 125 1.4e-09 WD domain, G-beta repeat
Beta-prop_EML PF23409 92 - 263 5.5e-06 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR3_2nd PF25172 100 - 202 5.9e-08 WDR3 second beta-propeller domain
WD40_CDC20-Fz PF24807 286 - 365 8.3e-10 CDC20/Fizzy WD40 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 66
AccB1I GGYRCC 1 cut(s) 1168
AccBSI CCGCTC 2 cut(s) 46, 657
AccI GTMKAC 3 cut(s) 163, 939, 1200
AciI CCGC 4 cut(s) 44, 154, 555, 655
AclI AACGTT 1 cut(s) 7
AclWI GGATC 2 cut(s) 251, 1374
AcoI YGGCCR 1 cut(s) 959
AcsI RAATTY 3 cut(s) 631, 717, 1036
AcuI CTGAAG 1 cut(s) 769
AcyI GRCGYC 2 cut(s) 63, 1169
AfaI GTAC 5 cut(s) 139, 335, 511, 713, 760
AfiI CCNNNNNNNGG 3 cut(s) 1010, 1178, 1179
AflIII ACRYGT 2 cut(s) 755, 971
AgsI TTSAA 9 cut(s) 32, 181, 267, 384, 502, 893, 933, 1137, 1310
AhlI ACTAGT 1 cut(s) 140
AjnI CCWGG 1 cut(s) 79
AjuI GAANNNNNNNTTGG 2 cut(s) 1247, 1279
AleI CACNNNNGTG 4 cut(s) 55, 427, 642, 704
AluBI AGCT 4 cut(s) 72, 198, 985, 1097
AluI AGCT 4 cut(s) 72, 198, 985, 1097
Alw21I GWGCWC 2 cut(s) 200, 1213
Alw26I GTCTC 1 cut(s) 256
AlwI GGATC 2 cut(s) 251, 1374
Ama87I CYCGRG 2 cut(s) 133, 735
AoxI GGCC 3 cut(s) 388, 739, 959
ApaI GGGCCC 1 cut(s) 743
ApeKI GCWGC 2 cut(s) 678, 1094
ApoI RAATTY 3 cut(s) 631, 717, 1036
AseI ATTAAT 1 cut(s) 1389
Asp700I GAANNNNTTC 1 cut(s) 721
AspLEI GCGC 2 cut(s) 796, 1171
AspS9I GGNCC 4 cut(s) 519, 562, 739, 740
AsuC2I CCSGG 1 cut(s) 863
AsuHPI GGTGA 1 cut(s) 434
AvaI CYCGRG 2 cut(s) 133, 735
AvaII GGWCC 2 cut(s) 519, 562
BaeGI GKGCMC 1 cut(s) 743
BanI GGYRCC 1 cut(s) 1168
BanII GRGCYC 2 cut(s) 200, 743
Bbv12I GWGCWC 2 cut(s) 200, 1213
BbvI GCAGC 2 cut(s) 690, 1106
BccI CCATC 5 cut(s) 221, 593, 761, 1199, 1213
BcgI CGANNNNNNTGC 2 cut(s) 1190, 1224
BciT130I CCWGG 1 cut(s) 81
BcnI CCSGG 1 cut(s) 863
BcoDI GTCTC 1 cut(s) 256
BcuI ACTAGT 1 cut(s) 140
BfaI CTAG 1 cut(s) 141
BfmI CTRYAG 1 cut(s) 986
BfoI RGCGCY 1 cut(s) 1172
BglII AGATCT 1 cut(s) 202
BisI GCNGC 2 cut(s) 679, 1095
BlsI GCNGC 2 cut(s) 680, 1096
BmcAI AGTACT 2 cut(s) 139, 511
Bme1390I CCNGG 2 cut(s) 81, 863
Bme18I GGWCC 2 cut(s) 519, 562
BmeT110I CYCGRG 2 cut(s) 133, 735
BmgT120I GGNCC 4 cut(s) 519, 562, 739, 740
BmiI GGNNCC 4 cut(s) 232, 740, 741, 1170
BmrFI CCNGG 2 cut(s) 81, 863
BmrI ACTGGG 1 cut(s) 522
BmsI GCATC 4 cut(s) 230, 286, 676, 1055
BmuI ACTGGG 1 cut(s) 522
BplI GAGNNNNNCTC 2 cut(s) 61, 93
BpmI CTGGAG 1 cut(s) 678
BpuEI CTTGAG 2 cut(s) 257, 747
BpuMI CCSGG 1 cut(s) 863
Bsa29I ATCGAT 2 cut(s) 997, 1115
BsaBI GATNNNNATC 1 cut(s) 1223
BsaHI GRCGYC 2 cut(s) 63, 1169
BsaJI CCNNGG 1 cut(s) 1177
Bsc4I CCNNNNNNNGG 3 cut(s) 1010, 1178, 1179
Bse1I ACTGG 3 cut(s) 517, 580, 695
Bse3DI GCAATG 2 cut(s) 336, 481
Bse8I GATNNNNATC 1 cut(s) 1223
BseBI CCWGG 1 cut(s) 81
BseCI ATCGAT 2 cut(s) 997, 1115
BseDI CCNNGG 1 cut(s) 1177
BseGI GGATG 3 cut(s) 94, 1224, 1324
BseJI GATNNNNATC 1 cut(s) 1223
BseLI CCNNNNNNNGG 3 cut(s) 1010, 1178, 1179
BseMI GCAATG 2 cut(s) 336, 481
BseMII CTCAG 2 cut(s) 213, 1246
BseNI ACTGG 3 cut(s) 517, 580, 695
BseRI GAGGAG 1 cut(s) 1203
BseSI GKGCMC 1 cut(s) 743
BseXI GCAGC 2 cut(s) 690, 1106
Bsh1285I CGRYCG 1 cut(s) 1161
BshFI GGCC 3 cut(s) 390, 741, 961
BshNI GGYRCC 1 cut(s) 1168
BshVI ATCGAT 2 cut(s) 997, 1115
BsiEI CGRYCG 1 cut(s) 1161
BsiHKAI GWGCWC 2 cut(s) 200, 1213
BsiHKCI CYCGRG 2 cut(s) 133, 735
BsiSI CCGG 1 cut(s) 862
BslFI GGGAC 2 cut(s) 616, 1196
BslI CCNNNNNNNGG 3 cut(s) 1010, 1178, 1179
BsmAI GTCTC 1 cut(s) 256
BsmFI GGGAC 2 cut(s) 616, 1196
BsnI GGCC 3 cut(s) 390, 741, 961
BsoBI CYCGRG 2 cut(s) 133, 735
Bsp120I GGGCCC 1 cut(s) 739
Bsp1286I GDGCHC 3 cut(s) 200, 743, 1213
Bsp143I GATC 8 cut(s) 202, 256, 582, 1085, 1158, 1243, 1366, 1378
BspACI CCGC 4 cut(s) 44, 154, 555, 655
BspANI GGCC 3 cut(s) 390, 741, 961
BspCNI CTCAG 2 cut(s) 212, 1245
BspDI ATCGAT 2 cut(s) 997, 1115
BspLI GGNNCC 4 cut(s) 232, 740, 741, 1170
BspPI GGATC 2 cut(s) 251, 1374
BspT107I GGYRCC 1 cut(s) 1168
BsrBI CCGCTC 2 cut(s) 46, 657
BsrDI GCAATG 2 cut(s) 336, 481
BsrI ACTGG 3 cut(s) 517, 580, 695
BssECI CCNNGG 1 cut(s) 1177
BssMI GATC 8 cut(s) 202, 256, 582, 1085, 1158, 1243, 1366, 1378
BssNI GRCGYC 2 cut(s) 63, 1169
BssT1I CCWWGG 1 cut(s) 1177
Bst2UI CCWGG 1 cut(s) 81
Bst4CI ACNGT 9 cut(s) 175, 241, 250, 364, 429, 496, 545, 706, 1069
Bst6I CTCTTC 3 cut(s) 825, 1076, 1399
BstACI GRCGYC 2 cut(s) 63, 1169
BstC8I GCNNGC 3 cut(s) 158, 210, 683
BstDEI CTNAG 2 cut(s) 199, 1232
BstF5I GGATG 3 cut(s) 94, 1224, 1324
BstH2I RGCGCY 1 cut(s) 1172
BstHHI GCGC 2 cut(s) 796, 1171
BstKTI GATC 8 cut(s) 205, 259, 585, 1088, 1161, 1246, 1369, 1381
BstMAI GTCTC 1 cut(s) 256
BstMBI GATC 8 cut(s) 202, 256, 582, 1085, 1158, 1243, 1366, 1378
BstMCI CGRYCG 1 cut(s) 1161
BstMWI GCNNNNNNNGC 1 cut(s) 218
BstNI CCWGG 1 cut(s) 81
BstNSI RCATGY 2 cut(s) 759, 975
BstSCI CCNGG 2 cut(s) 79, 861
BstSFI CTRYAG 1 cut(s) 986
BstSLI GKGCMC 1 cut(s) 743
BstV1I GCAGC 2 cut(s) 690, 1106
BstX2I RGATCY 2 cut(s) 202, 1366
BstYI RGATCY 2 cut(s) 202, 1366
Bsu15I ATCGAT 2 cut(s) 997, 1115
BsuRI GGCC 3 cut(s) 390, 741, 961
BsuTUI ATCGAT 2 cut(s) 997, 1115
BtsCI GGATG 3 cut(s) 94, 1224, 1324
BtsIMutI CAGTG 4 cut(s) 246, 573, 793, 1240
Cac8I GCNNGC 3 cut(s) 158, 210, 683
CfoI GCGC 2 cut(s) 796, 1171
Cfr13I GGNCC 4 cut(s) 519, 562, 739, 740
ClaI ATCGAT 2 cut(s) 997, 1115
CseI GACGC 1 cut(s) 149
Csp6I GTAC 5 cut(s) 138, 334, 510, 712, 759
CviAII CATG 7 cut(s) 193, 566, 756, 972, 1028, 1165, 1330
CviQI GTAC 5 cut(s) 138, 334, 510, 712, 759
DdeI CTNAG 2 cut(s) 199, 1232
DinI GGCGCC 1 cut(s) 1170
DpnI GATC 8 cut(s) 204, 258, 584, 1087, 1160, 1245, 1368, 1380
DpnII GATC 8 cut(s) 202, 256, 582, 1085, 1158, 1243, 1366, 1378
EaeI YGGCCR 1 cut(s) 959
Eam1104I CTCTTC 3 cut(s) 825, 1076, 1399
EarI CTCTTC 3 cut(s) 825, 1076, 1399
Ecl136II GAGCTC 1 cut(s) 198
Eco130I CCWWGG 1 cut(s) 1177
Eco147I AGGCCT 1 cut(s) 390
Eco24I GRGCYC 2 cut(s) 200, 743
Eco32I GATATC 1 cut(s) 1113
Eco47I GGWCC 2 cut(s) 519, 562
Eco53kI GAGCTC 1 cut(s) 198
Eco57I CTGAAG 1 cut(s) 769
Eco88I CYCGRG 2 cut(s) 133, 735
EcoICRI GAGCTC 1 cut(s) 198
EcoO109I RGGNCCY 2 cut(s) 739, 740
EcoRI GAATTC 1 cut(s) 631
EcoRII CCWGG 1 cut(s) 79
EcoRV GATATC 1 cut(s) 1113
EcoT14I CCWWGG 1 cut(s) 1177
EcoT22I ATGCAT 1 cut(s) 398
EcoT38I GRGCYC 2 cut(s) 200, 743
EgeI GGCGCC 1 cut(s) 1170
EheI GGCGCC 1 cut(s) 1170
ErhI CCWWGG 1 cut(s) 1177
FaeI CATG 7 cut(s) 196, 569, 759, 975, 1031, 1168, 1333
FalI AAGNNNNNCTT 2 cut(s) 763, 795
FaqI GGGAC 2 cut(s) 616, 1196
FatI CATG 7 cut(s) 192, 565, 755, 971, 1027, 1164, 1329
FauI CCCGC 1 cut(s) 662
FauNDI CATATG 1 cut(s) 214
FblI GTMKAC 3 cut(s) 163, 939, 1200
Fnu4HI GCNGC 2 cut(s) 679, 1095
FokI GGATG 3 cut(s) 101, 1211, 1331
FriOI GRGCYC 2 cut(s) 200, 743
Fsp4HI GCNGC 2 cut(s) 679, 1095
FspBI CTAG 1 cut(s) 141
GlaI GCGC 2 cut(s) 795, 1170
GluI GCNGC 2 cut(s) 679, 1095
GsuI CTGGAG 1 cut(s) 678
HaeII RGCGCY 1 cut(s) 1172
HaeIII GGCC 3 cut(s) 390, 741, 961
HapII CCGG 1 cut(s) 862
HgaI GACGC 1 cut(s) 149
HhaI GCGC 2 cut(s) 796, 1171
Hin1I GRCGYC 2 cut(s) 63, 1169
Hin1II CATG 7 cut(s) 196, 569, 759, 975, 1031, 1168, 1333
Hin6I GCGC 2 cut(s) 794, 1169
HinP1I GCGC 2 cut(s) 794, 1169
HincII GTYRAC 3 cut(s) 107, 164, 1201
HindII GTYRAC 3 cut(s) 107, 164, 1201
HinfI GANTC 6 cut(s) 40, 76, 817, 929, 1024, 1395
HpaII CCGG 1 cut(s) 862
HphI GGTGA 1 cut(s) 434
Hpy166II GTNNAC 6 cut(s) 107, 164, 940, 979, 1201, 1411
Hpy188I TCNGA 9 cut(s) 39, 202, 226, 256, 282, 1054, 1110, 1218, 1371
Hpy188III TCNNGA 2 cut(s) 67, 764
Hpy8I GTNNAC 6 cut(s) 107, 164, 940, 979, 1201, 1411
Hpy99I CGWCG 5 cut(s) 68, 165, 1205, 1274, 1403
HpyAV CCTTC 2 cut(s) 120, 273
HpyCH4III ACNGT 9 cut(s) 175, 241, 250, 364, 429, 496, 545, 706, 1069
HpyCH4IV ACGT 2 cut(s) 7, 63
HpyCH4V TGCA 6 cut(s) 4, 94, 212, 246, 396, 479
HpyF10VI GCNNNNNNNGC 1 cut(s) 218
HpyF3I CTNAG 2 cut(s) 199, 1232
HpySE526I ACGT 2 cut(s) 7, 63
Hsp92I GRCGYC 2 cut(s) 63, 1169
Hsp92II CATG 7 cut(s) 196, 569, 759, 975, 1031, 1168, 1333
HspAI GCGC 2 cut(s) 794, 1169
KasI GGCGCC 1 cut(s) 1168
Kzo9I GATC 8 cut(s) 202, 256, 582, 1085, 1158, 1243, 1366, 1378
LmnI GCTCC 2 cut(s) 218, 1216
Lsp1109I GCAGC 2 cut(s) 690, 1106
LweI GCATC 4 cut(s) 230, 286, 676, 1055
MaeI CTAG 1 cut(s) 141
MaeII ACGT 2 cut(s) 7, 63
MaeIII GTNAC 6 cut(s) 59, 169, 287, 301, 550, 697
MalI GATC 8 cut(s) 204, 258, 584, 1087, 1160, 1245, 1368, 1380
MbiI CCGCTC 2 cut(s) 46, 657
MboI GATC 8 cut(s) 202, 256, 582, 1085, 1158, 1243, 1366, 1378
MboII GAAGA 5 cut(s) 775, 812, 938, 1093, 1416
MflI RGATCY 2 cut(s) 202, 1366
MhlI GDGCHC 3 cut(s) 200, 743, 1213
MluCI AATT 7 cut(s) 489, 502, 631, 717, 836, 1036, 1358
Mly113I GGCGCC 1 cut(s) 1169
MlyI GAGTC 4 cut(s) 49, 70, 811, 1389
MmeI TCCRAC 2 cut(s) 898, 1252
MnlI CCTC 8 cut(s) 45, 270, 281, 355, 510, 888, 1183, 1224
Mph1103I ATGCAT 1 cut(s) 398
MroXI GAANNNNTTC 1 cut(s) 721
MseI TTAA 3 cut(s) 839, 953, 1389
MslI CAYNNNNRTG 7 cut(s) 55, 282, 427, 642, 704, 972, 1190
MspI CCGG 1 cut(s) 862
MspR9I CCNGG 2 cut(s) 81, 863
MvaI CCWGG 1 cut(s) 81
MwoI GCNNNNNNNGC 1 cut(s) 218
NarI GGCGCC 1 cut(s) 1169
NciI CCSGG 1 cut(s) 863
NdeI CATATG 1 cut(s) 214
NdeII GATC 8 cut(s) 202, 256, 582, 1085, 1158, 1243, 1366, 1378
NlaIII CATG 7 cut(s) 196, 569, 759, 975, 1031, 1168, 1333
NlaIV GGNNCC 4 cut(s) 232, 740, 741, 1170
NmeAIII GCCGAG 1 cut(s) 937
NmuCI GTSAC 3 cut(s) 59, 287, 697
NsiI ATGCAT 1 cut(s) 398
NspI RCATGY 2 cut(s) 759, 975
OliI CACNNNNGTG 4 cut(s) 55, 427, 642, 704
PaeR7I CTCGAG 1 cut(s) 133
PceI AGGCCT 1 cut(s) 390
PciI ACATGT 2 cut(s) 755, 971
PdmI GAANNNNTTC 1 cut(s) 721
PfeI GAWTC 2 cut(s) 929, 1024
PkrI GCNGC 2 cut(s) 680, 1096
Ple19I CGATCG 1 cut(s) 1161
PleI GAGTC 4 cut(s) 48, 70, 811, 1389
PluTI GGCGCC 1 cut(s) 1172
PpsI GAGTC 4 cut(s) 48, 70, 811, 1389
PscI ACATGT 2 cut(s) 755, 971
PshBI ATTAAT 1 cut(s) 1389
Psp124BI GAGCTC 1 cut(s) 200
Psp1406I AACGTT 1 cut(s) 7
Psp6I CCWGG 1 cut(s) 79
PspGI CCWGG 1 cut(s) 79
PspN4I GGNNCC 4 cut(s) 232, 740, 741, 1170
PspOMI GGGCCC 1 cut(s) 739
PspPI GGNCC 4 cut(s) 519, 562, 739, 740
PspXI VCTCGAGB 1 cut(s) 133
PsuI RGATCY 2 cut(s) 202, 1366
PvuI CGATCG 1 cut(s) 1161
RsaI GTAC 5 cut(s) 139, 335, 511, 713, 760
RsaNI GTAC 5 cut(s) 138, 334, 510, 712, 759
RseI CAYNNNNRTG 7 cut(s) 55, 282, 427, 642, 704, 972, 1190
SacI GAGCTC 1 cut(s) 200
SalI GTCGAC 2 cut(s) 162, 1199
SaqAI TTAA 3 cut(s) 839, 953, 1389
SatI GCNGC 2 cut(s) 679, 1095
Sau3AI GATC 8 cut(s) 202, 256, 582, 1085, 1158, 1243, 1366, 1378
Sau96I GGNCC 4 cut(s) 519, 562, 739, 740
ScaI AGTACT 2 cut(s) 139, 511
SchI GAGTC 4 cut(s) 49, 70, 811, 1389
ScrFI CCNGG 2 cut(s) 81, 863
SduI GDGCHC 3 cut(s) 200, 743, 1213
SfaNI GCATC 4 cut(s) 230, 286, 676, 1055
SfcI CTRYAG 1 cut(s) 986
SfoI GGCGCC 1 cut(s) 1170
Sfr274I CTCGAG 1 cut(s) 133
SinI GGWCC 2 cut(s) 519, 562
SlaI CTCGAG 1 cut(s) 133
SmiMI CAYNNNNRTG 7 cut(s) 55, 282, 427, 642, 704, 972, 1190
SmlI CTYRAG 4 cut(s) 17, 133, 272, 762
SmoI CTYRAG 4 cut(s) 17, 133, 272, 762
SpeI ACTAGT 1 cut(s) 140
Sse9I AATT 7 cut(s) 489, 502, 631, 717, 836, 1036, 1358
SseBI AGGCCT 1 cut(s) 390
SsiI CCGC 4 cut(s) 44, 154, 555, 655
SspDI GGCGCC 1 cut(s) 1168
SspMI CTAG 1 cut(s) 141
SstI GAGCTC 1 cut(s) 200
StuI AGGCCT 1 cut(s) 390
StyD4I CCNGG 2 cut(s) 79, 861
StyI CCWWGG 1 cut(s) 1177
TaaI ACNGT 9 cut(s) 175, 241, 250, 364, 429, 496, 545, 706, 1069
TaiI ACGT 2 cut(s) 10, 66
TasI AATT 7 cut(s) 489, 502, 631, 717, 836, 1036, 1358
TatI WGTACW 4 cut(s) 137, 333, 509, 758
TfiI GAWTC 2 cut(s) 929, 1024
Tru1I TTAA 3 cut(s) 839, 953, 1389
Tru9I TTAA 3 cut(s) 839, 953, 1389
TscAI CASTG 4 cut(s) 253, 580, 793, 1240
TseFI GTSAC 3 cut(s) 59, 287, 697
TseI GCWGC 2 cut(s) 678, 1094
Tsp45I GTSAC 3 cut(s) 59, 287, 697
TspDTI ATGAA 5 cut(s) 13, 102, 515, 644, 1371
TspGWI ACGGA 1 cut(s) 1416
TspRI CASTG 4 cut(s) 253, 580, 793, 1240
VpaK11BI GGWCC 2 cut(s) 519, 562
VspI ATTAAT 1 cut(s) 1389
XapI RAATTY 3 cut(s) 631, 717, 1036
XceI RCATGY 2 cut(s) 759, 975
XcmI CCANNNNNNNNNTGG 1 cut(s) 572
XhoI CTCGAG 1 cut(s) 133
XmiI GTMKAC 3 cut(s) 163, 939, 1200
XmnI GAANNNNTTC 1 cut(s) 721
XspI CTAG 1 cut(s) 141
ZraI GACGTC 1 cut(s) 64
ZrmI AGTACT 2 cut(s) 139, 511
Zsp2I ATGCAT 1 cut(s) 398
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.