RLG00000013956

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0002209
Physical Location & Seq
Forward (+)
44708719 .. 44723934
15216 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013956

Sequence Viewer

Length: 1770 bp
ATGGAATGTCATGACAACCCCCACCAACACCACCACCACCCCCACACTCGTTTCCAATTTTCCACCACCCCCACCAAAACTAATGCCACCAGGGCTATTTGGGTTTTCGGGTCTTTAACCCGGCAACATCCTCCATGGAGCAACTGGATACCATTCATAAAATCCGGAGCTGCTGATGTGCTTGCTCCAACCTTGTCTATTAGACTCCAATCGGCACTCTCTCGCAAGTCTCAGTCCTCCATTCTAGATTGGAGATGCAACGGTAAGGGCTATGTGGCGTTCCGAAATTTCATTCAGAGGCCGAGAAATTGGGAGAAGGATAGTCTGCGGACTCAGAGCCTCCAGACTACTCCAGGAAACAGTTCATATCTCAAGTTCATATTTCAACCTCCGAGTCCGCTCTCACTTTTGTGTGACGTCGAGAGCTGGACTCCTGGCAGGGATGTGCATAGTGGCAGTCAACCTTCATCTCGTAGAAGTTTTGGCTCGAGTACTAGTGATAATGACCGCCTGCGTCGACAGGTTACTGTTTTGAAGTTTTGGCACATGAGCTCAGATCTGCTTGCATATGGAGCATCAGATGGAACCTTGACAGTATGCACTGTCTCTGATCCTCCTTCAATCCTCAAGCATCTGAATGGTCACTCCAAAGATGTTACAGACTTTGAGTTCTCGTCAAACAATCAGTACATTGCTTCCTCATCGGTGGATAAAACTGTGAGAATATGGGAGATTTCAAAAGGCCTATGCATAAGAGTAATATATGGAGTTTCTCCACAACTGTGTATTCGTTTTCACCCTGTAAATAACAACTTCCTTTCAGTTGGCAATGCAAACAAAGAAATTACGGTTTTCAATTTCAGTACTGGGAGGACCATTCATAAAACATCATTTGACAGTCAAGTTACCGCTATGGACCATGCTCACACTGGACAGATCATTTTCTGTGGAGATGGGACGGGGTGTATATATTCTGTCAGTATGAATTCTCACACAGGTGTATTATCCCGCTCTCATCGGCATCGAAGTAGCAGCAGGCAGAAATCTCCAGTCACAACTGTGGAGTACCGAATTTTTTCTCTGTTGGCTCGGGGCCCTGTGTTGCTGACATGTACTCAAGATGGAAGTTTGTCTTTCTTCAGTGTTGCGCTGGAAATACAAGGTTATTTGACTCTTCGTTGCTCACTCAAATTAACTCCACGAATATACAATATCCGGGCTTCCTTTTGTCCTCTGCTTTCCCTTGAAAAAGGAGAATATATAGTTTTTGTTGGAAGTGAAGATTCAAATGTCTACTTCTACGACTTAACTCGGCCAAAGCATACATGTGTAAACAAGCTACAGGGTCATCGATTTCCTGTTATTGGGGTTGCTTGGAATCATGGAGAGAATTTATTAGCATCATCTGATTTCTATGATACGGTTATTGTATGGAAGAGATCAAAGGCAGCTTTCTATTTTCCGATATCGATTTCTCTCCTTTTCTTTTCAATCGCTATGTCAATCAAACCGATCGACATGGCGCCCTCCCTTAGGGACACCGATATGGTTGTCGACGATGGTGCTCCTCTGATGGACATCCAACTCAGTGTGTTTGATCTTTTACCGAATGAGTATTTGGACGACGATGATGTTGTTGAGCGATTTGAGTTTGTTTGGATTGAAAACAAGGATGATTGGAACATGGAGATTGGATATGATGATGATGATGAATTGTGGGATCTGATTATTGATCTACTTATTAATCGACTCGACGGAAGAATGGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

590

Amino Acids

66.75

Weight (kDa)

6.74

Isoelectric Point (pI)

42.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR5 PF25175 172 - 479 1.6e-30 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 172 - 256 1e-12 WDR3 first beta-propeller domain
Beta-prop_EML_2 PF23414 172 - 248 1.5e-07 Echinoderm microtubule-associated protein second beta-propeller
WDR55 PF24796 173 - 478 2.5e-12 WDR55
WD40_WDHD1_1st PF24817 174 - 341 3.7e-14 WDHD1 first WD40 domain
WD40_Prp19 PF24814 175 - 332 5.4e-14 Prp19 WD40 domain
WD40_CDC20-Fz PF24807 177 - 350 8.8e-15 CDC20/Fizzy WD40 domain
Beta-prop_WDR36-Utp21_2nd PF25168 180 - 289 1.8e-11 WDR36/Utp21 second beta-propeller domain
Beta-prop_THOC3 PF25174 181 - 335 7.5e-22 THOC3 beta-propeller domain
Beta-prop_CAF1B_HIR1 PF24105 208 - 302 6e-09 CAF1B/HIR1 beta-propeller domain
WD40 PF00400 209 - 243 1.8e-09 WD domain, G-beta repeat
Beta-prop_EML PF23409 210 - 381 8.4e-06 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR3_2nd PF25172 218 - 323 8.2e-08 WDR3 second beta-propeller domain
WD40_CDC20-Fz PF24807 404 - 484 9.8e-10 CDC20/Fizzy WD40 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 420
AccB1I GGYRCC 1 cut(s) 1522
AccBSI CCGCTC 2 cut(s) 400, 1011
AccI GTMKAC 3 cut(s) 517, 1293, 1554
AccIII TCCGGA 1 cut(s) 164
AciI CCGC 5 cut(s) 328, 398, 508, 909, 1009
AclWI GGATC 2 cut(s) 605, 1728
AcoI YGGCCR 1 cut(s) 1313
AcsI RAATTY 4 cut(s) 286, 985, 1071, 1390
AcuI CTGAAG 1 cut(s) 1123
AcyI GRCGYC 2 cut(s) 417, 1523
AfaI GTAC 5 cut(s) 493, 689, 865, 1067, 1114
AfiI CCNNNNNNNGG 2 cut(s) 1364, 1533
AflIII ACRYGT 2 cut(s) 1109, 1325
AgsI TTSAA 9 cut(s) 386, 535, 621, 738, 856, 1247, 1287, 1491, 1664
AhlI ACTAGT 1 cut(s) 494
AjnI CCWGG 3 cut(s) 89, 352, 433
AjuI GAANNNNNNNTTGG 2 cut(s) 1601, 1633
AleI CACNNNNGTG 4 cut(s) 409, 781, 996, 1058
AluBI AGCT 5 cut(s) 170, 426, 552, 1339, 1451
AluI AGCT 5 cut(s) 170, 426, 552, 1339, 1451
Alw21I GWGCWC 2 cut(s) 554, 1567
Alw26I GTCTC 2 cut(s) 234, 610
AlwI GGATC 2 cut(s) 605, 1728
Ama87I CYCGRG 2 cut(s) 487, 1089
Aor13HI TCCGGA 1 cut(s) 164
AoxI GGCC 4 cut(s) 299, 742, 1093, 1313
ApaI GGGCCC 1 cut(s) 1097
ApeKI GCWGC 3 cut(s) 170, 1032, 1448
ApoI RAATTY 4 cut(s) 286, 985, 1071, 1390
AseI ATTAAT 1 cut(s) 1743
Asp700I GAANNNNTTC 2 cut(s) 361, 1075
AspLEI GCGC 2 cut(s) 1150, 1525
AspS9I GGNCC 4 cut(s) 873, 916, 1093, 1094
AsuC2I CCSGG 2 cut(s) 121, 1217
AsuHPI GGTGA 1 cut(s) 788
AvaI CYCGRG 2 cut(s) 487, 1089
AvaII GGWCC 2 cut(s) 873, 916
AxyI CCTNAGG 1 cut(s) 1532
BaeGI GKGCMC 1 cut(s) 1097
BanI GGYRCC 1 cut(s) 1522
BanII GRGCYC 2 cut(s) 554, 1097
Bbv12I GWGCWC 2 cut(s) 554, 1567
BbvI GCAGC 3 cut(s) 157, 1044, 1460
BccI CCATC 5 cut(s) 575, 947, 1115, 1553, 1567
BcgI CGANNNNNNTGC 2 cut(s) 1544, 1578
BciT130I CCWGG 3 cut(s) 91, 354, 435
BciVI GTATCC 1 cut(s) 141
BcnI CCSGG 2 cut(s) 121, 1217
BcoDI GTCTC 2 cut(s) 234, 610
BcuI ACTAGT 1 cut(s) 494
BfaI CTAG 2 cut(s) 245, 495
BfmI CTRYAG 1 cut(s) 1340
BfoI RGCGCY 1 cut(s) 1526
BfuI GTATCC 1 cut(s) 141
BglI GCCNNNNNGGC 1 cut(s) 92
BglII AGATCT 1 cut(s) 556
BisI GCNGC 3 cut(s) 171, 1033, 1449
BlsI GCNGC 3 cut(s) 172, 1034, 1450
BmcAI AGTACT 2 cut(s) 493, 865
Bme1390I CCNGG 5 cut(s) 91, 121, 354, 435, 1217
Bme18I GGWCC 2 cut(s) 873, 916
BmeT110I CYCGRG 2 cut(s) 487, 1089
BmgT120I GGNCC 4 cut(s) 873, 916, 1093, 1094
BmiI GGNNCC 4 cut(s) 586, 1094, 1095, 1524
BmrFI CCNGG 5 cut(s) 91, 121, 354, 435, 1217
BmrI ACTGGG 1 cut(s) 876
BmsI GCATC 5 cut(s) 245, 584, 640, 1030, 1409
BmuI ACTGGG 1 cut(s) 876
BplI GAGNNNNNCTC 2 cut(s) 415, 447
BpmI CTGGAG 3 cut(s) 326, 336, 1032
BpuEI CTTGAG 3 cut(s) 356, 611, 1101
BpuMI CCSGG 2 cut(s) 121, 1217
Bsa29I ATCGAT 2 cut(s) 1351, 1469
BsaBI GATNNNNATC 1 cut(s) 1577
BsaHI GRCGYC 2 cut(s) 417, 1523
BsaJI CCNNGG 2 cut(s) 90, 134
BsaWI WCCGGW 1 cut(s) 164
Bsc4I CCNNNNNNNGG 2 cut(s) 1364, 1533
Bse1I ACTGG 4 cut(s) 149, 871, 934, 1049
Bse21I CCTNAGG 1 cut(s) 1532
Bse3DI GCAATG 2 cut(s) 690, 835
Bse8I GATNNNNATC 1 cut(s) 1577
BseAI TCCGGA 1 cut(s) 164
BseBI CCWGG 3 cut(s) 91, 354, 435
BseCI ATCGAT 2 cut(s) 1351, 1469
BseDI CCNNGG 2 cut(s) 90, 134
BseGI GGATG 4 cut(s) 127, 448, 1578, 1678
BseJI GATNNNNATC 1 cut(s) 1577
BseLI CCNNNNNNNGG 2 cut(s) 1364, 1533
BseMI GCAATG 2 cut(s) 690, 835
BseMII CTCAG 4 cut(s) 245, 347, 567, 1600
BseNI ACTGG 4 cut(s) 149, 871, 934, 1049
BseRI GAGGAG 1 cut(s) 1557
BseSI GKGCMC 1 cut(s) 1097
BseXI GCAGC 3 cut(s) 157, 1044, 1460
Bsh1285I CGRYCG 1 cut(s) 1515
BshFI GGCC 4 cut(s) 301, 744, 1095, 1315
BshNI GGYRCC 1 cut(s) 1522
BshVI ATCGAT 2 cut(s) 1351, 1469
BsiEI CGRYCG 1 cut(s) 1515
BsiHKAI GWGCWC 2 cut(s) 554, 1567
BsiHKCI CYCGRG 2 cut(s) 487, 1089
BsiSI CCGG 3 cut(s) 121, 165, 1216
BslFI GGGAC 2 cut(s) 970, 1550
BslI CCNNNNNNNGG 2 cut(s) 1364, 1533
BsmAI GTCTC 2 cut(s) 234, 610
BsmFI GGGAC 2 cut(s) 970, 1550
BsnI GGCC 4 cut(s) 301, 744, 1095, 1315
BsoBI CYCGRG 2 cut(s) 487, 1089
Bsp120I GGGCCC 1 cut(s) 1093
Bsp1286I GDGCHC 3 cut(s) 554, 1097, 1567
Bsp13I TCCGGA 1 cut(s) 164
Bsp143I GATC 8 cut(s) 556, 610, 936, 1439, 1512, 1597, 1720, 1732
Bsp19I CCATGG 1 cut(s) 134
BspACI CCGC 5 cut(s) 328, 398, 508, 909, 1009
BspANI GGCC 4 cut(s) 301, 744, 1095, 1315
BspCNI CTCAG 4 cut(s) 244, 346, 566, 1599
BspDI ATCGAT 2 cut(s) 1351, 1469
BspEI TCCGGA 1 cut(s) 164
BspHI TCATGA 1 cut(s) 10
BspLI GGNNCC 4 cut(s) 586, 1094, 1095, 1524
BspPI GGATC 2 cut(s) 605, 1728
BspT107I GGYRCC 1 cut(s) 1522
BsrBI CCGCTC 2 cut(s) 400, 1011
BsrDI GCAATG 2 cut(s) 690, 835
BsrI ACTGG 4 cut(s) 149, 871, 934, 1049
BssECI CCNNGG 2 cut(s) 90, 134
BssMI GATC 8 cut(s) 556, 610, 936, 1439, 1512, 1597, 1720, 1732
BssNI GRCGYC 2 cut(s) 417, 1523
BssT1I CCWWGG 1 cut(s) 134
Bst2UI CCWGG 3 cut(s) 91, 354, 435
Bst6I CTCTTC 2 cut(s) 1179, 1430
BstACI GRCGYC 2 cut(s) 417, 1523
BstC8I GCNNGC 4 cut(s) 183, 512, 564, 1037
BstDEI CTNAG 5 cut(s) 231, 333, 553, 1532, 1586
BstDSI CCRYGG 1 cut(s) 134
BstENI CCTNNNNNAGG 1 cut(s) 1531
BstF5I GGATG 4 cut(s) 127, 448, 1578, 1678
BstH2I RGCGCY 1 cut(s) 1526
BstHHI GCGC 2 cut(s) 1150, 1525
BstKTI GATC 8 cut(s) 559, 613, 939, 1442, 1515, 1600, 1723, 1735
BstMAI GTCTC 2 cut(s) 234, 610
BstMBI GATC 8 cut(s) 556, 610, 936, 1439, 1512, 1597, 1720, 1732
BstMCI CGRYCG 1 cut(s) 1515
BstMWI GCNNNNNNNGC 2 cut(s) 92, 572
BstNI CCWGG 3 cut(s) 91, 354, 435
BstNSI RCATGY 2 cut(s) 1113, 1329
BstSCI CCNGG 5 cut(s) 89, 119, 352, 433, 1215
BstSFI CTRYAG 1 cut(s) 1340
BstSLI GKGCMC 1 cut(s) 1097
BstV1I GCAGC 3 cut(s) 157, 1044, 1460
BstX2I RGATCY 2 cut(s) 556, 1720
BstYI RGATCY 2 cut(s) 556, 1720
Bsu15I ATCGAT 2 cut(s) 1351, 1469
Bsu36I CCTNAGG 1 cut(s) 1532
BsuI GTATCC 1 cut(s) 141
BsuRI GGCC 4 cut(s) 301, 744, 1095, 1315
BsuTUI ATCGAT 2 cut(s) 1351, 1469
BtgI CCRYGG 1 cut(s) 134
BtsCI GGATG 4 cut(s) 127, 448, 1578, 1678
BtsIMutI CAGTG 4 cut(s) 600, 927, 1147, 1594
Cac8I GCNNGC 4 cut(s) 183, 512, 564, 1037
CciI TCATGA 1 cut(s) 10
CfoI GCGC 2 cut(s) 1150, 1525
Cfr13I GGNCC 4 cut(s) 873, 916, 1093, 1094
ClaI ATCGAT 2 cut(s) 1351, 1469
CseI GACGC 1 cut(s) 503
Csp6I GTAC 5 cut(s) 492, 688, 864, 1066, 1113
CviAII CATG 9 cut(s) 11, 135, 547, 920, 1110, 1326, 1382, 1519, 1684
CviQI GTAC 5 cut(s) 492, 688, 864, 1066, 1113
DdeI CTNAG 5 cut(s) 231, 333, 553, 1532, 1586
DinI GGCGCC 1 cut(s) 1524
DpnI GATC 8 cut(s) 558, 612, 938, 1441, 1514, 1599, 1722, 1734
DpnII GATC 8 cut(s) 556, 610, 936, 1439, 1512, 1597, 1720, 1732
EaeI YGGCCR 1 cut(s) 1313
Eam1104I CTCTTC 2 cut(s) 1179, 1430
EarI CTCTTC 2 cut(s) 1179, 1430
Ecl136II GAGCTC 1 cut(s) 552
Eco130I CCWWGG 1 cut(s) 134
Eco147I AGGCCT 1 cut(s) 744
Eco24I GRGCYC 2 cut(s) 554, 1097
Eco32I GATATC 1 cut(s) 1467
Eco47I GGWCC 2 cut(s) 873, 916
Eco53kI GAGCTC 1 cut(s) 552
Eco57I CTGAAG 1 cut(s) 1123
Eco81I CCTNAGG 1 cut(s) 1532
Eco88I CYCGRG 2 cut(s) 487, 1089
EcoICRI GAGCTC 1 cut(s) 552
EcoNI CCTNNNNNAGG 1 cut(s) 1531
EcoO109I RGGNCCY 2 cut(s) 1093, 1094
EcoRI GAATTC 1 cut(s) 985
EcoRII CCWGG 3 cut(s) 89, 352, 433
EcoRV GATATC 1 cut(s) 1467
EcoT14I CCWWGG 1 cut(s) 134
EcoT22I ATGCAT 1 cut(s) 752
EcoT38I GRGCYC 2 cut(s) 554, 1097
EgeI GGCGCC 1 cut(s) 1524
EheI GGCGCC 1 cut(s) 1524
ErhI CCWWGG 1 cut(s) 134
FaeI CATG 9 cut(s) 14, 138, 550, 923, 1113, 1329, 1385, 1522, 1687
FalI AAGNNNNNCTT 2 cut(s) 1117, 1149
FaqI GGGAC 2 cut(s) 970, 1550
FatI CATG 9 cut(s) 10, 134, 546, 919, 1109, 1325, 1381, 1518, 1683
FauI CCCGC 1 cut(s) 1016
FauNDI CATATG 1 cut(s) 568
FblI GTMKAC 3 cut(s) 517, 1293, 1554
Fnu4HI GCNGC 3 cut(s) 171, 1033, 1449
FokI GGATG 4 cut(s) 114, 455, 1565, 1685
FriOI GRGCYC 2 cut(s) 554, 1097
Fsp4HI GCNGC 3 cut(s) 171, 1033, 1449
FspBI CTAG 2 cut(s) 245, 495
GlaI GCGC 2 cut(s) 1149, 1524
GluI GCNGC 3 cut(s) 171, 1033, 1449
GsuI CTGGAG 3 cut(s) 326, 336, 1032
HaeII RGCGCY 1 cut(s) 1526
HaeIII GGCC 4 cut(s) 301, 744, 1095, 1315
HapII CCGG 3 cut(s) 121, 165, 1216
HgaI GACGC 1 cut(s) 503
HhaI GCGC 2 cut(s) 1150, 1525
Hin1I GRCGYC 2 cut(s) 417, 1523
Hin1II CATG 9 cut(s) 14, 138, 550, 923, 1113, 1329, 1385, 1522, 1687
Hin6I GCGC 2 cut(s) 1148, 1523
HinP1I GCGC 2 cut(s) 1148, 1523
HincII GTYRAC 3 cut(s) 461, 518, 1555
HindII GTYRAC 3 cut(s) 461, 518, 1555
HinfI GANTC 8 cut(s) 204, 331, 394, 430, 1171, 1283, 1378, 1749
HpaII CCGG 3 cut(s) 121, 165, 1216
HphI GGTGA 1 cut(s) 788
Hpy166II GTNNAC 5 cut(s) 461, 518, 1294, 1333, 1555
Hpy188III TCNNGA 6 cut(s) 11, 165, 245, 343, 421, 1118
Hpy8I GTNNAC 5 cut(s) 461, 518, 1294, 1333, 1555
Hpy99I CGWCG 5 cut(s) 422, 519, 1559, 1628, 1757
HpyAV CCTTC 3 cut(s) 310, 474, 627
HpyCH4IV ACGT 1 cut(s) 417
HpyCH4V TGCA 6 cut(s) 258, 448, 566, 600, 750, 833
HpyF10VI GCNNNNNNNGC 2 cut(s) 92, 572
HpyF3I CTNAG 5 cut(s) 231, 333, 553, 1532, 1586
HpySE526I ACGT 1 cut(s) 417
Hsp92I GRCGYC 2 cut(s) 417, 1523
Hsp92II CATG 9 cut(s) 14, 138, 550, 923, 1113, 1329, 1385, 1522, 1687
HspAI GCGC 2 cut(s) 1148, 1523
KasI GGCGCC 1 cut(s) 1522
Kpn2I TCCGGA 1 cut(s) 164
Kzo9I GATC 8 cut(s) 556, 610, 936, 1439, 1512, 1597, 1720, 1732
LmnI GCTCC 5 cut(s) 138, 167, 190, 572, 1570
Lsp1109I GCAGC 3 cut(s) 157, 1044, 1460
LweI GCATC 5 cut(s) 245, 584, 640, 1030, 1409
MaeI CTAG 2 cut(s) 245, 495
MaeII ACGT 1 cut(s) 417
MaeIII GTNAC 6 cut(s) 413, 523, 641, 655, 904, 1051
MalI GATC 8 cut(s) 558, 612, 938, 1441, 1514, 1599, 1722, 1734
MbiI CCGCTC 2 cut(s) 400, 1011
MboI GATC 8 cut(s) 556, 610, 936, 1439, 1512, 1597, 1720, 1732
MboII GAAGA 5 cut(s) 1129, 1166, 1292, 1447, 1770
MflI RGATCY 2 cut(s) 556, 1720
MhlI GDGCHC 3 cut(s) 554, 1097, 1567
Mly113I GGCGCC 1 cut(s) 1523
MlyI GAGTC 6 cut(s) 198, 325, 403, 424, 1165, 1743
MmeI TCCRAC 3 cut(s) 212, 1252, 1606
Mph1103I ATGCAT 1 cut(s) 752
MroI TCCGGA 1 cut(s) 164
MroXI GAANNNNTTC 2 cut(s) 361, 1075
MseI TTAA 4 cut(s) 116, 1193, 1307, 1743
MslI CAYNNNNRTG 7 cut(s) 409, 636, 781, 996, 1058, 1326, 1544
MspI CCGG 3 cut(s) 121, 165, 1216
MspR9I CCNGG 5 cut(s) 91, 121, 354, 435, 1217
MvaI CCWGG 3 cut(s) 91, 354, 435
MwoI GCNNNNNNNGC 2 cut(s) 92, 572
NarI GGCGCC 1 cut(s) 1523
NciI CCSGG 2 cut(s) 121, 1217
NcoI CCATGG 1 cut(s) 134
NdeI CATATG 1 cut(s) 568
NdeII GATC 8 cut(s) 556, 610, 936, 1439, 1512, 1597, 1720, 1732
NlaIII CATG 9 cut(s) 14, 138, 550, 923, 1113, 1329, 1385, 1522, 1687
NlaIV GGNNCC 4 cut(s) 586, 1094, 1095, 1524
NmeAIII GCCGAG 2 cut(s) 327, 1291
NmuCI GTSAC 3 cut(s) 413, 641, 1051
NsiI ATGCAT 1 cut(s) 752
NspI RCATGY 2 cut(s) 1113, 1329
OliI CACNNNNGTG 4 cut(s) 409, 781, 996, 1058
PaeR7I CTCGAG 1 cut(s) 487
PagI TCATGA 1 cut(s) 10
PceI AGGCCT 1 cut(s) 744
PciI ACATGT 2 cut(s) 1109, 1325
PdmI GAANNNNTTC 2 cut(s) 361, 1075
PfeI GAWTC 2 cut(s) 1283, 1378
PfoI TCCNGGA 1 cut(s) 352
PkrI GCNGC 3 cut(s) 172, 1034, 1450
Ple19I CGATCG 1 cut(s) 1515
PleI GAGTC 6 cut(s) 198, 325, 402, 424, 1165, 1743
PluTI GGCGCC 1 cut(s) 1526
PpsI GAGTC 6 cut(s) 198, 325, 402, 424, 1165, 1743
PscI ACATGT 2 cut(s) 1109, 1325
PshBI ATTAAT 1 cut(s) 1743
Psp124BI GAGCTC 1 cut(s) 554
Psp6I CCWGG 3 cut(s) 89, 352, 433
PspGI CCWGG 3 cut(s) 89, 352, 433
PspN4I GGNNCC 4 cut(s) 586, 1094, 1095, 1524
PspOMI GGGCCC 1 cut(s) 1093
PspPI GGNCC 4 cut(s) 873, 916, 1093, 1094
PspXI VCTCGAGB 1 cut(s) 487
PsuI RGATCY 2 cut(s) 556, 1720
PvuI CGATCG 1 cut(s) 1515
RsaI GTAC 5 cut(s) 493, 689, 865, 1067, 1114
RsaNI GTAC 5 cut(s) 492, 688, 864, 1066, 1113
RseI CAYNNNNRTG 7 cut(s) 409, 636, 781, 996, 1058, 1326, 1544
SacI GAGCTC 1 cut(s) 554
SalI GTCGAC 2 cut(s) 516, 1553
SaqAI TTAA 4 cut(s) 116, 1193, 1307, 1743
SatI GCNGC 3 cut(s) 171, 1033, 1449
Sau3AI GATC 8 cut(s) 556, 610, 936, 1439, 1512, 1597, 1720, 1732
Sau96I GGNCC 4 cut(s) 873, 916, 1093, 1094
ScaI AGTACT 2 cut(s) 493, 865
SchI GAGTC 6 cut(s) 198, 325, 403, 424, 1165, 1743
ScrFI CCNGG 5 cut(s) 91, 121, 354, 435, 1217
SduI GDGCHC 3 cut(s) 554, 1097, 1567
SfaNI GCATC 5 cut(s) 245, 584, 640, 1030, 1409
SfcI CTRYAG 1 cut(s) 1340
SfoI GGCGCC 1 cut(s) 1524
Sfr274I CTCGAG 1 cut(s) 487
SinI GGWCC 2 cut(s) 873, 916
SlaI CTCGAG 1 cut(s) 487
SmiMI CAYNNNNRTG 7 cut(s) 409, 636, 781, 996, 1058, 1326, 1544
SmlI CTYRAG 4 cut(s) 371, 487, 626, 1116
SmoI CTYRAG 4 cut(s) 371, 487, 626, 1116
SpeI ACTAGT 1 cut(s) 494
SseBI AGGCCT 1 cut(s) 744
SsiI CCGC 5 cut(s) 328, 398, 508, 909, 1009
SspDI GGCGCC 1 cut(s) 1522
SspMI CTAG 2 cut(s) 245, 495
SstI GAGCTC 1 cut(s) 554
StuI AGGCCT 1 cut(s) 744
StyD4I CCNGG 5 cut(s) 89, 119, 352, 433, 1215
StyI CCWWGG 1 cut(s) 134
TaiI ACGT 1 cut(s) 420
TatI WGTACW 4 cut(s) 491, 687, 863, 1112
TfiI GAWTC 2 cut(s) 1283, 1378
Tru1I TTAA 4 cut(s) 116, 1193, 1307, 1743
Tru9I TTAA 4 cut(s) 116, 1193, 1307, 1743
TscAI CASTG 4 cut(s) 607, 934, 1147, 1594
TseFI GTSAC 3 cut(s) 413, 641, 1051
TseI GCWGC 3 cut(s) 170, 1032, 1448
Tsp45I GTSAC 3 cut(s) 413, 641, 1051
TspDTI ATGAA 8 cut(s) 145, 280, 354, 367, 456, 869, 998, 1725
TspGWI ACGGA 1 cut(s) 1770
TspRI CASTG 4 cut(s) 607, 934, 1147, 1594
VpaK11BI GGWCC 2 cut(s) 873, 916
VspI ATTAAT 1 cut(s) 1743
XagI CCTNNNNNAGG 1 cut(s) 1531
XapI RAATTY 4 cut(s) 286, 985, 1071, 1390
XbaI TCTAGA 1 cut(s) 244
XceI RCATGY 2 cut(s) 1113, 1329
XcmI CCANNNNNNNNNTGG 2 cut(s) 141, 926
XhoI CTCGAG 1 cut(s) 487
XmiI GTMKAC 3 cut(s) 517, 1293, 1554
XmnI GAANNNNTTC 2 cut(s) 361, 1075
XspI CTAG 2 cut(s) 245, 495
ZraI GACGTC 1 cut(s) 418
ZrmI AGTACT 2 cut(s) 493, 865
Zsp2I ATGCAT 1 cut(s) 752
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.