Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0001414

Physical Location & Seq

Genomic Coordinates Reverse (-)

11033941 .. 11038161

Gene Structure 4221 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1062900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1455 bp

ATGATTACAAACTCCTTCAATAAGGGTCGAAGGAACAGTAAAGTAATGTCTTTCCCTATGGAGGACGACATTGATGCCGAGGAGCTCAAGGCAGCTCAGGAATTCCGGCAAAAACTTCTTTCGGAAGAACTACTGCCCTCGAAACATGACGATACTCATATGTTGCTAAGATTTTTAAGGGCCCGGAAATTTGATGTTGAGAAAACAAAGCAAATGTGGTCTGACATGCTCCAATGGAGGCAGGAATACGGTGCTGACACTATTATGGAGGACTTTGAGTTCAAGGAAGTCGATGAAGTCTTGAAATACTATCCACAAGGGCATCATGGAGTTGATAAGGATGGACGGCCTGTCTACATTGAGAAACTGGGTCAAGTCGATTCTAATAAGCTGATGCAAGCAACAACAATGGACCGGTATGTAAGGTACCACGTACGGGAGTTTGAGAGGACCTTTATCTGTAAATTCCCTGCCTGTTCCGTTGCAGCAAAAAAGCACATCGATCAGAGTACCACTATTCTTGATGTCCAAGGAGTGGGGCTTACAAGTTTAAATAAATCTGCAAGGGAACTCATCCAGCGCCTTCAGAAGGTTGATGGTGACAATTATCCTGAGACCCTGAACCGTATGTTCATCATCAATGCTGGTTCTGGATTTAGGCTCTTATGGAACACTGTCAAATCTTTCCTTGATCCCAAGACCACTGCAAAAATCAATGTTCTGGGAAATCAATATCAGAGCAAGTTGCTTGAAATAATTGAGGCCACTGAGCTACCAGAGTTTTTGGGTGGTAGTTGCACTTGTGCTGATAAGGGTGGTTGCATGCTCTCTGATAAGGGCCCATGGAACGATACAGAAATAATCAAGATGGTTCAGAGTATTCATGAGGCCAAATGCGCAAGCAACAAATCATCAGGCGATCTGGAGGAGAAAATATTGGAAGAGGAGAAGAAAATATCTGAAGACGAGACGAAAGTCTCTGAAGAGGAGACTAAAGTCTATGAGGAGGAGACAAAAGTTTCTGAAGAGAAGTTAATCCCCGAAGACGCGAAGGCTTGCACAAACAGAATGGATTCTTTCTGCTCAGATACGTTTTTAGAGGCTGAAACGCACTCAGACCATCTCTCTTCTTTGCCTGAAGAACTTTTAACTCCGAGAATGTATCCGATGGGATATGACGATGTTGATTCAATGGTTTGCAAGGGAACTGAGAGAGAGGCAGAAAGGCTGAACGCTGCTCTCAATCGACTCAGTGCCTTGGAAAAAGAGCTGTCTTCAACCAAGCAAGTTGAGACGCAGAAAGAAGAAAAGCTAAAGGCTGCTCTTGACCGCATCAATGCTTTGGAACAAGAGCTGACAGAAGCCAAGAAGGCACTGGAGGAAGCCCGTCTTAAACAAGAGGAGCTTCTAGCCTCTGTCGACAAGGAAAAGAAATTTAGCTTATTCTGTTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0003006 GO:0003674 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005622 GO:0005623 GO:0005628 GO:0005634 GO:0006629 GO:0006644 GO:0006650 GO:0006656 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0008525 GO:0008526 GO:0008610 GO:0008654 GO:0009058 GO:0009653 GO:0009791 GO:0009908 GO:0009987 GO:0010876 GO:0010927 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016192 GO:0019637 GO:0019953 GO:0022402 GO:0022413 GO:0022414 GO:0022607 GO:0030154 GO:0030427 GO:0030435 GO:0030437 GO:0031321 GO:0031322 GO:0032153 GO:0032501 GO:0032502 GO:0032505 GO:0032989 GO:0033036 GO:0034293 GO:0035838 GO:0042763 GO:0042764 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043934 GO:0043935 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044464 GO:0044703 GO:0045017 GO:0046470 GO:0046474 GO:0046486 GO:0048193 GO:0048367 GO:0048468 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0051286 GO:0051321 GO:0051704 GO:0060187 GO:0061024 GO:0061458 GO:0071702 GO:0071704 GO:0071840 GO:0090407 GO:0090567 GO:0097164 GO:0120009 GO:0120010 GO:1901564 GO:1901566 GO:1901576 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRAL_TRIO CRAL_TRIO_N

Protein Analysis

485

Amino Acids

55.58

Weight (kDa)

5.08

Isoelectric Point (pI)

46.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRAL_TRIO_N	PF03765	33 - 74	2.2e-08	CRAL/TRIO, N-terminal domain
CRAL_TRIO	PF00650	102 - 264	9.9e-30	CRAL/TRIO domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001414)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16380 AT2G16380 AT2G16380 AT2G21540 AT2G21540 AT2G21540 AT2G21540 AT2G21540 AT2G21540 AT4G34580 AT4G34580 AT4G39180 AT4G39180 AT4G39180
fragaria_vesca	FvH4_2g09420 FvH4_2g09420 FvH4_2g09420 FvH4_2g09490 FvH4_2g09490
malus_domestica	MD05G1062700.v1.1 MD05G1062800.v1.1 MD05G1062900.v1.1 MD10G1070400.v1.1 MD10G1070500.v1.1
prunus_persica	Prupe.8G092000_v2.0.a1 Prupe.8G092100_v2.0.a1 Prupe.8G092200_v2.0.a1
pyrus_communis	pycom05g05440 pycom10g05620 pycom10g05630
rosa_chinensis	RchiOBHm_Chr6g0265701 RchiOBHm_Chr6g0265771
rosa_laevigata	RLG00000014161 RLG00000014165
rosa_multiflora	Rmu_co8114364.1_g000001 Rmu_sc0000208.1_g000028 Rmu_sc0008535.1_g000015
rosa_roxburghii	Rroxscaffold_175G00432510 Rroxscaffold_175G00432560 Rroxscaffold_7G00202430
rosa_rugosa	Rorug06G0018500 Rorug06G0019000
rosa_samantha	Rh6AG140700 Rh6AG141500 Rh6BG141100 Rh6BG141400 Rh6CG137700 Rh6CG138000 Rh6DG124600 Rh6DG125000
rosa_wichuraiana	Rw6G012170 Rw6G012230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	898
Acc65I	GGTACC	1 cut(s)	426
AccB1I	GGYRCC	1 cut(s)	426
AccB7I	CCANNNNNTGG	1 cut(s)	535
AccI	GTMKAC	2 cut(s)	354, 1419
AccII	CGCG	1 cut(s)	1049
AciI	CCGC	1 cut(s)	1330
AclWI	GGATC	1 cut(s)	686
AcsI	RAATTY	4 cut(s)	101, 188, 464, 1433
AcuI	CTGAAG	5 cut(s)	569, 981, 1002, 1044, 1158
AfaI	GTAC	3 cut(s)	428, 435, 511
AfiI	CCNNNNNNNGG	4 cut(s)	61, 436, 535, 589
AgeI	ACCGGT	1 cut(s)	414
AgsI	TTSAA	6 cut(s)	19, 283, 304, 752, 1191, 1278
AhdI	GACNNNNNGTC	1 cut(s)	350
AloI	GAACNNNNNNTCC	2 cut(s)	263, 295
AluBI	AGCT	9 cut(s)	85, 95, 391, 772, 1270, 1312, 1354, 1405, 1440
AluI	AGCT	9 cut(s)	85, 95, 391, 772, 1270, 1312, 1354, 1405, 1440
Alw21I	GWGCWC	1 cut(s)	87
Alw26I	GTCTC	6 cut(s)	608, 962, 982, 983, 1004, 1286
AlwI	GGATC	1 cut(s)	686
AoxI	GGCC	5 cut(s)	180, 347, 762, 838, 888
ApaI	GGGCCC	2 cut(s)	184, 842
ApeKI	GCWGC	4 cut(s)	92, 485, 1235, 1319
ApoI	RAATTY	4 cut(s)	101, 188, 464, 1433
AsiGI	ACCGGT	1 cut(s)	414
Asp700I	GAANNNNTTC	1 cut(s)	1072
Asp718I	GGTACC	1 cut(s)	426
AspLEI	GCGC	2 cut(s)	582, 899
AspS9I	GGNCC	6 cut(s)	180, 181, 412, 450, 838, 839
AsuC2I	CCSGG	1 cut(s)	184
AsuHPI	GGTGA	1 cut(s)	611
AvaII	GGWCC	2 cut(s)	412, 450
BaeGI	GKGCMC	2 cut(s)	184, 842
BanI	GGYRCC	1 cut(s)	426
BanII	GRGCYC	3 cut(s)	87, 184, 842
BbsI	GAAGAC	3 cut(s)	969, 1050, 1266
Bbv12I	GWGCWC	1 cut(s)	87
BbvI	GCAGC	4 cut(s)	104, 497, 1222, 1306
BccI	CCATC	5 cut(s)	335, 590, 862, 1128, 1162
BceAI	ACGGC	1 cut(s)	362
BcgI	CGANNNNNNTGC	2 cut(s)	56, 90
BciVI	GTATCC	1 cut(s)	1173
BcnI	CCSGG	1 cut(s)	184
BcoDI	GTCTC	6 cut(s)	608, 962, 982, 983, 1004, 1286
BfaI	CTAG	1 cut(s)	1409
BfoI	RGCGCY	1 cut(s)	583
BfuI	GTATCC	1 cut(s)	1173
BglI	GCCNNNNNGGC	1 cut(s)	1370
BisI	GCNGC	4 cut(s)	93, 486, 1236, 1320
BlsI	GCNGC	4 cut(s)	94, 487, 1237, 1321
Bme1390I	CCNGG	1 cut(s)	184
Bme18I	GGWCC	2 cut(s)	412, 450
BmeRI	GACNNNNNGTC	1 cut(s)	350
BmgT120I	GGNCC	6 cut(s)	180, 181, 412, 450, 838, 839
BmiI	GGNNCC	3 cut(s)	182, 428, 840
BmrFI	CCNGG	1 cut(s)	184
BmrI	ACTGGG	1 cut(s)	377
BmsI	GCATC	4 cut(s)	64, 331, 384, 1341
BmuI	ACTGGG	1 cut(s)	377
BoxI	GACNNNNGTC	2 cut(s)	974, 995
BpiI	GAAGAC	3 cut(s)	969, 1050, 1266
BpmI	CTGGAG	2 cut(s)	944, 1397
Bpu10I	CCTNAGC	1 cut(s)	96
BpuEI	CTTGAG	1 cut(s)	71
BpuMI	CCSGG	1 cut(s)	184
Bsa29I	ATCGAT	1 cut(s)	501
BsaAI	YACGTR	1 cut(s)	433
BsaI	GGTCTC	1 cut(s)	608
BsaJI	CCNNGG	4 cut(s)	78, 529, 842, 1257
BsaWI	WCCGGW	1 cut(s)	414
Bsc4I	CCNNNNNNNGG	4 cut(s)	61, 436, 535, 589
Bse118I	RCCGGY	1 cut(s)	414
Bse1I	ACTGG	2 cut(s)	372, 1380
BseCI	ATCGAT	1 cut(s)	501
BseDI	CCNNGG	4 cut(s)	78, 529, 842, 1257
BseGI	GGATG	2 cut(s)	346, 573
BseLI	CCNNNNNNNGG	4 cut(s)	61, 436, 535, 589
BseMII	CTCAG	7 cut(s)	110, 603, 759, 1098, 1128, 1200, 1264
BseNI	ACTGG	2 cut(s)	372, 1380
BseRI	GAGGAG	7 cut(s)	95, 941, 959, 1001, 1019, 1022, 1415
BseSI	GKGCMC	2 cut(s)	184, 842
BseXI	GCAGC	4 cut(s)	104, 497, 1222, 1306
Bsh1236I	CGCG	1 cut(s)	1049
BshFI	GGCC	5 cut(s)	182, 349, 764, 840, 890
BshNI	GGYRCC	1 cut(s)	426
BshTI	ACCGGT	1 cut(s)	414
BshVI	ATCGAT	1 cut(s)	501
BsiHKAI	GWGCWC	1 cut(s)	87
BsiSI	CCGG	3 cut(s)	106, 184, 415
BsiWI	CGTACG	1 cut(s)	433
BslI	CCNNNNNNNGG	4 cut(s)	61, 436, 535, 589
BsmAI	GTCTC	6 cut(s)	608, 962, 982, 983, 1004, 1286
BsmBI	CGTCTC	2 cut(s)	962, 1286
BsnI	GGCC	5 cut(s)	182, 349, 764, 840, 890
Bso31I	GGTCTC	1 cut(s)	608
Bsp120I	GGGCCC	2 cut(s)	180, 838
Bsp1286I	GDGCHC	3 cut(s)	87, 184, 842
Bsp143I	GATC	3 cut(s)	502, 691, 919
Bsp19I	CCATGG	1 cut(s)	842
BspACI	CCGC	1 cut(s)	1330
BspANI	GGCC	5 cut(s)	182, 349, 764, 840, 890
BspCNI	CTCAG	7 cut(s)	109, 604, 760, 1097, 1127, 1201, 1263
BspDI	ATCGAT	1 cut(s)	501
BspFNI	CGCG	1 cut(s)	1049
BspHI	TCATGA	1 cut(s)	883
BspLI	GGNNCC	3 cut(s)	182, 428, 840
BspPI	GGATC	1 cut(s)	686
BspT107I	GGYRCC	1 cut(s)	426
BspTNI	GGTCTC	1 cut(s)	608
BsrFI	RCCGGY	1 cut(s)	414
BsrI	ACTGG	2 cut(s)	372, 1380
BssAI	RCCGGY	1 cut(s)	414
BssECI	CCNNGG	4 cut(s)	78, 529, 842, 1257
BssMI	GATC	3 cut(s)	502, 691, 919
BssT1I	CCWWGG	3 cut(s)	529, 842, 1257
Bst4CI	ACNGT	4 cut(s)	38, 251, 626, 676
Bst6I	CTCTTC	4 cut(s)	936, 978, 1020, 1132
BstBAI	YACGTR	1 cut(s)	433
BstC8I	GCNNGC	4 cut(s)	399, 824, 901, 1057
BstDEI	CTNAG	8 cut(s)	96, 167, 612, 768, 1084, 1114, 1209, 1250
BstDSI	CCRYGG	1 cut(s)	842
BstENI	CCTNNNNNAGG	1 cut(s)	587
BstF5I	GGATG	2 cut(s)	346, 573
BstFNI	CGCG	1 cut(s)	1049
BstH2I	RGCGCY	1 cut(s)	583
BstHHI	GCGC	2 cut(s)	582, 899
BstKTI	GATC	3 cut(s)	505, 694, 922
BstMAI	GTCTC	6 cut(s)	608, 962, 982, 983, 1004, 1286
BstMBI	GATC	3 cut(s)	502, 691, 919
BstMWI	GCNNNNNNNGC	2 cut(s)	896, 1370
BstNSI	RCATGY	2 cut(s)	229, 826
BstPAI	GACNNNNGTC	2 cut(s)	974, 995
BstSCI	CCNGG	1 cut(s)	182
BstSLI	GKGCMC	2 cut(s)	184, 842
BstUI	CGCG	1 cut(s)	1049
BstV1I	GCAGC	4 cut(s)	104, 497, 1222, 1306
BstV2I	GAAGAC	3 cut(s)	969, 1050, 1266
Bsu15I	ATCGAT	1 cut(s)	501
BsuI	GTATCC	1 cut(s)	1173
BsuRI	GGCC	5 cut(s)	182, 349, 764, 840, 890
BsuTUI	ATCGAT	1 cut(s)	501
BtgI	CCRYGG	1 cut(s)	842
BtsCI	GGATG	2 cut(s)	346, 573
BtsI	GCAGTG	1 cut(s)	702
BtsIMutI	CAGTG	5 cut(s)	672, 702, 765, 1258, 1373
Cac8I	GCNNGC	4 cut(s)	399, 824, 901, 1057
CciI	TCATGA	1 cut(s)	883
CfoI	GCGC	2 cut(s)	582, 899
Cfr10I	RCCGGY	1 cut(s)	414
Cfr13I	GGNCC	6 cut(s)	180, 181, 412, 450, 838, 839
ClaI	ATCGAT	1 cut(s)	501
CseI	GACGC	2 cut(s)	1055, 1303
Csp6I	GTAC	3 cut(s)	427, 434, 510
CspAI	ACCGGT	1 cut(s)	414
CspCI	CAANNNNNGTGG	2 cut(s)	502, 537
CviAII	CATG	6 cut(s)	146, 226, 326, 823, 843, 884
CviQI	GTAC	3 cut(s)	427, 434, 510
DdeI	CTNAG	8 cut(s)	96, 167, 612, 768, 1084, 1114, 1209, 1250
DpnI	GATC	3 cut(s)	504, 693, 921
DpnII	GATC	3 cut(s)	502, 691, 919
DraI	TTTAAA	1 cut(s)	552
DriI	GACNNNNNGTC	1 cut(s)	350
Eam1104I	CTCTTC	4 cut(s)	936, 978, 1020, 1132
Eam1105I	GACNNNNNGTC	1 cut(s)	350
EarI	CTCTTC	4 cut(s)	936, 978, 1020, 1132
Ecl136II	GAGCTC	1 cut(s)	85
Eco130I	CCWWGG	3 cut(s)	529, 842, 1257
Eco24I	GRGCYC	3 cut(s)	87, 184, 842
Eco31I	GGTCTC	1 cut(s)	608
Eco47I	GGWCC	2 cut(s)	412, 450
Eco53kI	GAGCTC	1 cut(s)	85
Eco57I	CTGAAG	5 cut(s)	569, 981, 1002, 1044, 1158
EcoICRI	GAGCTC	1 cut(s)	85
EcoNI	CCTNNNNNAGG	1 cut(s)	587
EcoO109I	RGGNCCY	3 cut(s)	180, 450, 838
EcoRI	GAATTC	1 cut(s)	101
EcoT14I	CCWWGG	3 cut(s)	529, 842, 1257
EcoT38I	GRGCYC	3 cut(s)	87, 184, 842
ErhI	CCWWGG	3 cut(s)	529, 842, 1257
Esp3I	CGTCTC	2 cut(s)	962, 1286
FaeI	CATG	6 cut(s)	149, 229, 329, 826, 846, 887
FalI	AAGNNNNNCTT	4 cut(s)	1374, 1406, 1389, 1421
FatI	CATG	6 cut(s)	145, 225, 325, 822, 842, 883
FauNDI	CATATG	1 cut(s)	159
FblI	GTMKAC	2 cut(s)	354, 1419
Fnu4HI	GCNGC	4 cut(s)	93, 486, 1236, 1320
FokI	GGATG	2 cut(s)	353, 560
FriOI	GRGCYC	3 cut(s)	87, 184, 842
Fsp4HI	GCNGC	4 cut(s)	93, 486, 1236, 1320
FspBI	CTAG	1 cut(s)	1409
FspI	TGCGCA	1 cut(s)	898
GlaI	GCGC	2 cut(s)	581, 898
GluI	GCNGC	4 cut(s)	93, 486, 1236, 1320
GsuI	CTGGAG	2 cut(s)	944, 1397
HaeII	RGCGCY	1 cut(s)	583
HaeIII	GGCC	5 cut(s)	182, 349, 764, 840, 890
HapII	CCGG	3 cut(s)	106, 184, 415
HgaI	GACGC	2 cut(s)	1055, 1303
HhaI	GCGC	2 cut(s)	582, 899
Hin1II	CATG	6 cut(s)	149, 229, 329, 826, 846, 887
Hin6I	GCGC	2 cut(s)	580, 897
HinP1I	GCGC	2 cut(s)	580, 897
HincII	GTYRAC	1 cut(s)	1420
HindII	GTYRAC	1 cut(s)	1420
HinfI	GANTC	4 cut(s)	380, 1073, 1187, 1248
HpaII	CCGG	3 cut(s)	106, 184, 415
HphI	GGTGA	1 cut(s)	611
Hpy166II	GTNNAC	2 cut(s)	355, 1420
Hpy188III	TCNNGA	9 cut(s)	98, 301, 521, 611, 651, 865, 884, 923, 1325
Hpy8I	GTNNAC	2 cut(s)	355, 1420
HpyAV	CCTTC	6 cut(s)	24, 25, 583, 593, 1045, 1363
HpyCH4III	ACNGT	4 cut(s)	38, 251, 626, 676
HpyCH4IV	ACGT	2 cut(s)	432, 1091
HpyCH4V	TGCA	8 cut(s)	397, 485, 563, 707, 798, 822, 1059, 1200
HpyF10VI	GCNNNNNNNGC	2 cut(s)	896, 1370
HpyF3I	CTNAG	8 cut(s)	96, 167, 612, 768, 1084, 1114, 1209, 1250
HpySE526I	ACGT	2 cut(s)	432, 1091
Hsp92II	CATG	6 cut(s)	149, 229, 329, 826, 846, 887
HspAI	GCGC	2 cut(s)	580, 897
KpnI	GGTACC	1 cut(s)	430
Kzo9I	GATC	3 cut(s)	502, 691, 919
LmnI	GCTCC	3 cut(s)	82, 234, 1402
Lsp1109I	GCAGC	4 cut(s)	104, 497, 1222, 1306
LweI	GCATC	4 cut(s)	64, 331, 384, 1341
MaeI	CTAG	1 cut(s)	1409
MaeII	ACGT	2 cut(s)	432, 1091
MaeIII	GTNAC	1 cut(s)	599
MalI	GATC	3 cut(s)	504, 693, 921
MboI	GATC	3 cut(s)	502, 691, 919
MhlI	GDGCHC	3 cut(s)	87, 184, 842
MluCI	AATT	6 cut(s)	101, 188, 464, 604, 756, 1433
MlyI	GAGTC	1 cut(s)	1242
MroXI	GAANNNNTTC	1 cut(s)	1072
MseI	TTAA	5 cut(s)	176, 551, 1034, 1148, 1392
MslI	CAYNNNNRTG	1 cut(s)	263
MspI	CCGG	3 cut(s)	106, 184, 415
MspR9I	CCNGG	1 cut(s)	184
MvnI	CGCG	1 cut(s)	1049
MwoI	GCNNNNNNNGC	2 cut(s)	896, 1370
NciI	CCSGG	1 cut(s)	184
NcoI	CCATGG	1 cut(s)	842
NdeI	CATATG	1 cut(s)	159
NdeII	GATC	3 cut(s)	502, 691, 919
NlaIII	CATG	6 cut(s)	149, 229, 329, 826, 846, 887
NlaIV	GGNNCC	3 cut(s)	182, 428, 840
NmeAIII	GCCGAG	1 cut(s)	103
NmuCI	GTSAC	1 cut(s)	599
NsbI	TGCGCA	1 cut(s)	898
NspI	RCATGY	2 cut(s)	229, 826
PaeI	GCATGC	1 cut(s)	826
PagI	TCATGA	1 cut(s)	883
PdmI	GAANNNNTTC	1 cut(s)	1072
PfeI	GAWTC	3 cut(s)	380, 1073, 1187
Pfl23II	CGTACG	1 cut(s)	433
PflMI	CCANNNNNTGG	1 cut(s)	535
PinAI	ACCGGT	1 cut(s)	414
PkrI	GCNGC	4 cut(s)	94, 487, 1237, 1321
PleI	GAGTC	1 cut(s)	1242
PpsI	GAGTC	1 cut(s)	1242
Ppu21I	YACGTR	1 cut(s)	433
PpuMI	RGGWCCY	1 cut(s)	450
PshAI	GACNNNNGTC	2 cut(s)	974, 995
Psp124BI	GAGCTC	1 cut(s)	87
Psp5II	RGGWCCY	1 cut(s)	450
PspLI	CGTACG	1 cut(s)	433
PspN4I	GGNNCC	3 cut(s)	182, 428, 840
PspOMI	GGGCCC	2 cut(s)	180, 838
PspPI	GGNCC	6 cut(s)	180, 181, 412, 450, 838, 839
PspPPI	RGGWCCY	1 cut(s)	450
RsaI	GTAC	3 cut(s)	428, 435, 511
RsaNI	GTAC	3 cut(s)	427, 434, 510
RseI	CAYNNNNRTG	1 cut(s)	263
SacI	GAGCTC	1 cut(s)	87
SalI	GTCGAC	1 cut(s)	1418
SaqAI	TTAA	5 cut(s)	176, 551, 1034, 1148, 1392
SatI	GCNGC	4 cut(s)	93, 486, 1236, 1320
Sau3AI	GATC	3 cut(s)	502, 691, 919
Sau96I	GGNCC	6 cut(s)	180, 181, 412, 450, 838, 839
SchI	GAGTC	1 cut(s)	1242
ScrFI	CCNGG	1 cut(s)	184
SduI	GDGCHC	3 cut(s)	87, 184, 842
SfaNI	GCATC	4 cut(s)	64, 331, 384, 1341
SinI	GGWCC	2 cut(s)	412, 450
SmiMI	CAYNNNNRTG	1 cut(s)	263
SmlI	CTYRAG	1 cut(s)	86
SmoI	CTYRAG	1 cut(s)	86
SphI	GCATGC	1 cut(s)	826
Sse9I	AATT	6 cut(s)	101, 188, 464, 604, 756, 1433
SsiI	CCGC	1 cut(s)	1330
SspI	AATATT	1 cut(s)	936
SspMI	CTAG	1 cut(s)	1409
SstI	GAGCTC	1 cut(s)	87
StyD4I	CCNGG	1 cut(s)	182
StyI	CCWWGG	3 cut(s)	529, 842, 1257
TaaI	ACNGT	4 cut(s)	38, 251, 626, 676
TaiI	ACGT	2 cut(s)	435, 1094
TaqI	TCGA	7 cut(s)	28, 140, 291, 378, 501, 1246, 1419
TasI	AATT	6 cut(s)	101, 188, 464, 604, 756, 1433
TfiI	GAWTC	3 cut(s)	380, 1073, 1187
Tru1I	TTAA	5 cut(s)	176, 551, 1034, 1148, 1392
Tru9I	TTAA	5 cut(s)	176, 551, 1034, 1148, 1392
TscAI	CASTG	5 cut(s)	679, 709, 772, 1258, 1380
TseFI	GTSAC	1 cut(s)	599
TseI	GCWGC	4 cut(s)	92, 485, 1235, 1319
Tsp45I	GTSAC	1 cut(s)	599
TspDTI	ATGAA	3 cut(s)	309, 622, 872
TspGWI	ACGGA	1 cut(s)	469
TspRI	CASTG	5 cut(s)	679, 709, 772, 1258, 1380
Van91I	CCANNNNNTGG	1 cut(s)	535
VpaK11BI	GGWCC	2 cut(s)	412, 450
XagI	CCTNNNNNAGG	1 cut(s)	587
XapI	RAATTY	4 cut(s)	101, 188, 464, 1433
XceI	RCATGY	2 cut(s)	229, 826
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1372
XmiI	GTMKAC	2 cut(s)	354, 1419
XmnI	GAANNNNTTC	1 cut(s)	1072
XspI	CTAG	1 cut(s)	1409

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.