Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0001414

Physical Location & Seq

Genomic Coordinates Forward (+)

21777303 .. 21782960

Gene Structure 5658 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG140700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1434 bp

ATGTCTTTCCCTATGGATGACATTGATGCAGAGGAGTTAAAGTCAGCCGAAGAATTTCGGAAAGCACTTATTGCGGAAGAACTGCTGCCTTCAAAACATGATGATACTCATATGCTGCTAAGATTTTTAAGGGCCAGGAAGTTTGACCCTGAGAAAACAAAGCAAATGTGGTCTGATATGCTCCACTGGAGGAAGGAATTTGGTGCTGACACTATTATGGAGGACTTCGAATTCAAGGAAATTGATGAAGTCTTGAAATATTATCCACAAGGGCATCATGGAGTTGATAAGGATGGACGCCCTGTCTATATTGAGAAACTTGGTCAAGTAGATTCCAATAAGCTGTTGCAAGTGACAACAATGGACAGATATGTGAAGTACCATGTACGAGAGTTTGAGAGGACGTTTGTGCATAAATTCCCTGCCTGTTCCATTGCGGCGAAGAAGCACATTGATCAGAGCACTACCATTTTGGATGTACAAGGAGTGGGGCTGACAAGTTTGAACAAATCTGCAAGGGAACTCATCCAACGCCTTCAGAAAGTTGACGGTGACAATTATCCTGAGACCCTGAACCGTATGTTCATCATCAATGCTGGTTCTGGATTTAGGCTCTTATGGAACACTGTCAAATCTTTCCTTGACCCCAAGACCACTGCAAAAATCAATGTACTGGGAAACCAATACCAAAGCAAGTTGCTTGAAATAATTGAAGCTAGCGAGCTGCCAGAGTTTTTGGGAGGTACTTGTACTTGTTCTGATAAGGGTGGCTGTATGCTTTCTGATAAGGGCCCATGGAATGATCTAGAAATAATGAAGATGGTTCAGAATTATGGCGAGGACCGTGAGGTTGACGCCAAATCCTCTAGCACAACTATATCCGGCAATGTGGATTCAAGCAATAAGGAGTTGGGCAAAAAGGAGTCAGGCAAAAAGGAGTCGGGCAAAAATGAATCGAGTAAAAATGAGTCGGGCAAACATGAGTTGGACAAGGAGTCGGACAAGAAGGAGTCAGACAAGAAGGAGTTGGACAAGAAGGAGGAGAAGAAGGTCGCTGAAGAAGAAAAAATCTCTGAAGATATGAAGGGTCCCCCAAATCGATCTGATTCAGTCTGCTCAGAGGCTTTTTTGGAGGCTAATGACATGCATATGGATCATCTCTCTCCTGTGCCTGAAGAACTGTCAACTCCCATGGGAGGTGAAAAAGAGGAAAAGCTTAGAGCTGCTCTTACTGCCTTGGAACAACAACTGTCTACAACCAAGCAGGCTGAGGTTGAGAAAGAGCAAAAGCTGAAGGCTGCTCTTGATCGCGTTAATGCCTTGGAACAAGAGCTAACAGAAACCAAGAAGGCACTTGATGAAGCCCGTGTTAAACAAGAGGAGCTTCTAGCCTCTGTTGGGAAGGAAAAGAAGTTTAGCCTATTCTGTTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0003006 GO:0003674 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005622 GO:0005623 GO:0005628 GO:0005634 GO:0006629 GO:0006644 GO:0006650 GO:0006656 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0008525 GO:0008526 GO:0008610 GO:0008654 GO:0009058 GO:0009653 GO:0009791 GO:0009908 GO:0009987 GO:0010876 GO:0010927 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016192 GO:0019637 GO:0019953 GO:0022402 GO:0022413 GO:0022414 GO:0022607 GO:0030154 GO:0030427 GO:0030435 GO:0030437 GO:0031321 GO:0031322 GO:0032153 GO:0032501 GO:0032502 GO:0032505 GO:0032989 GO:0033036 GO:0034293 GO:0035838 GO:0042763 GO:0042764 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043934 GO:0043935 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044464 GO:0044703 GO:0045017 GO:0046470 GO:0046474 GO:0046486 GO:0048193 GO:0048367 GO:0048468 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0051286 GO:0051321 GO:0051704 GO:0060187 GO:0061024 GO:0061458 GO:0071702 GO:0071704 GO:0071840 GO:0090407 GO:0090567 GO:0097164 GO:0120009 GO:0120010 GO:1901564 GO:1901566 GO:1901576 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRAL_TRIO CRAL_TRIO_N

Protein Analysis

477

Amino Acids

54.29

Weight (kDa)

5.35

Isoelectric Point (pI)

44.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRAL_TRIO_N	PF03765	21 - 58	2e-07	CRAL/TRIO, N-terminal domain
CRAL_TRIO	PF00650	86 - 248	5.6e-30	CRAL/TRIO domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001414)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16380 AT2G16380 AT2G16380 AT2G21540 AT2G21540 AT2G21540 AT2G21540 AT2G21540 AT2G21540 AT4G34580 AT4G34580 AT4G39180 AT4G39180 AT4G39180
fragaria_vesca	FvH4_2g09420 FvH4_2g09420 FvH4_2g09420 FvH4_2g09490 FvH4_2g09490
malus_domestica	MD05G1062700.v1.1 MD05G1062800.v1.1 MD05G1062900.v1.1 MD10G1070400.v1.1 MD10G1070500.v1.1
prunus_persica	Prupe.8G092000_v2.0.a1 Prupe.8G092100_v2.0.a1 Prupe.8G092200_v2.0.a1
pyrus_communis	pycom05g05440 pycom10g05620 pycom10g05630
rosa_chinensis	RchiOBHm_Chr6g0265701 RchiOBHm_Chr6g0265771
rosa_laevigata	RLG00000014161 RLG00000014165
rosa_multiflora	Rmu_co8114364.1_g000001 Rmu_sc0000208.1_g000028 Rmu_sc0008535.1_g000015
rosa_roxburghii	Rroxscaffold_175G00432510 Rroxscaffold_175G00432560 Rroxscaffold_7G00202430
rosa_rugosa	Rorug06G0018500 Rorug06G0019000
rosa_samantha	Rh6AG140700 Rh6AG141500 Rh6BG141100 Rh6BG141400 Rh6CG137700 Rh6CG138000 Rh6DG124600 Rh6DG125000
rosa_wichuraiana	Rw6G012170 Rw6G012230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1253
AccII	CGCG	1 cut(s)	1311
AciI	CCGC	2 cut(s)	74, 437
AclWI	GGATC	1 cut(s)	1161
AcsI	RAATTY	4 cut(s)	53, 197, 230, 416
AcuI	CTGAAG	5 cut(s)	521, 1077, 1095, 1194, 1313
AcyI	GRCGYC	2 cut(s)	298, 855
AfaI	GTAC	6 cut(s)	380, 387, 480, 672, 745, 751
AfiI	CCNNNNNNNGG	2 cut(s)	1196, 1398
AgsI	TTSAA	7 cut(s)	93, 235, 256, 505, 704, 713, 897
AhdI	GACNNNNNGTC	2 cut(s)	302, 994
AjnI	CCWGG	1 cut(s)	134
AluBI	AGCT	8 cut(s)	343, 716, 724, 1216, 1223, 1291, 1333, 1384
AluI	AGCT	8 cut(s)	343, 716, 724, 1216, 1223, 1291, 1333, 1384
Alw21I	GWGCWC	1 cut(s)	464
Alw26I	GTCTC	1 cut(s)	560
AlwI	GGATC	1 cut(s)	1161
AoxI	GGCC	2 cut(s)	132, 790
ApaI	GGGCCC	1 cut(s)	794
ApeKI	GCWGC	5 cut(s)	85, 115, 724, 1223, 1298
ApoI	RAATTY	4 cut(s)	53, 197, 230, 416
Asp700I	GAANNNNTTC	1 cut(s)	54
AspS9I	GGNCC	5 cut(s)	132, 790, 791, 841, 1088
AsuHPI	GGTGA	2 cut(s)	563, 1211
AsuII	TTCGAA	1 cut(s)	228
AsuNHI	GCTAGC	1 cut(s)	716
AvaII	GGWCC	2 cut(s)	841, 1088
BaeGI	GKGCMC	1 cut(s)	794
BanII	GRGCYC	1 cut(s)	794
Bbv12I	GWGCWC	1 cut(s)	464
BbvCI	CCTCAGC	1 cut(s)	1269
BbvI	GCAGC	5 cut(s)	72, 102, 711, 1210, 1285
BccI	CCATC	2 cut(s)	287, 814
BciT130I	CCWGG	1 cut(s)	136
BclI	TGATCA	1 cut(s)	454
BcoDI	GTCTC	1 cut(s)	560
BfaI	CTAG	4 cut(s)	717, 806, 867, 1388
BisI	GCNGC	6 cut(s)	86, 116, 438, 725, 1224, 1299
BlsI	GCNGC	6 cut(s)	87, 117, 439, 726, 1225, 1300
Bme1390I	CCNGG	1 cut(s)	136
Bme18I	GGWCC	2 cut(s)	841, 1088
BmeRI	GACNNNNNGTC	2 cut(s)	302, 994
BmgT120I	GGNCC	5 cut(s)	132, 790, 791, 841, 1088
BmiI	GGNNCC	3 cut(s)	792, 1089, 1090
BmrFI	CCNGG	1 cut(s)	136
BmrI	ACTGGG	1 cut(s)	683
BmsI	GCATC	2 cut(s)	16, 283
BmtI	GCTAGC	1 cut(s)	720
BmuI	ACTGGG	1 cut(s)	683
BpmI	CTGGAG	1 cut(s)	208
Bpu10I	CCTNAGC	1 cut(s)	1269
Bpu14I	TTCGAA	1 cut(s)	228
Bsa29I	ATCGAT	1 cut(s)	1099
BsaHI	GRCGYC	2 cut(s)	298, 855
BsaI	GGTCTC	1 cut(s)	560
BsaJI	CCNNGG	4 cut(s)	794, 1191, 1236, 1320
BsaXI	ACNNNNNCTCC	2 cut(s)	26, 56
Bsc4I	CCNNNNNNNGG	2 cut(s)	1196, 1398
Bse1I	ACTGG	2 cut(s)	191, 678
Bse3DI	GCAATG	2 cut(s)	432, 892
BseBI	CCWGG	1 cut(s)	136
BseCI	ATCGAT	1 cut(s)	1099
BseDI	CCNNGG	4 cut(s)	794, 1191, 1236, 1320
BseGI	GGATG	4 cut(s)	22, 298, 481, 525
BseLI	CCNNNNNNNGG	2 cut(s)	1196, 1398
BseMI	GCAATG	2 cut(s)	432, 892
BseMII	CTCAG	4 cut(s)	141, 555, 1131, 1260
BseNI	ACTGG	2 cut(s)	191, 678
BseRI	GAGGAG	3 cut(s)	47, 1055, 1394
BseSI	GKGCMC	1 cut(s)	794
BseXI	GCAGC	5 cut(s)	72, 102, 711, 1210, 1285
Bsh1236I	CGCG	1 cut(s)	1311
BshFI	GGCC	2 cut(s)	134, 792
BshVI	ATCGAT	1 cut(s)	1099
BsiHKAI	GWGCWC	1 cut(s)	464
BsiSI	CCGG	1 cut(s)	882
BslFI	GGGAC	1 cut(s)	1074
BslI	CCNNNNNNNGG	2 cut(s)	1196, 1398
BsmAI	GTCTC	1 cut(s)	560
BsmFI	GGGAC	1 cut(s)	1074
BsnI	GGCC	2 cut(s)	134, 792
Bso31I	GGTCTC	1 cut(s)	560
Bsp119I	TTCGAA	1 cut(s)	228
Bsp120I	GGGCCC	1 cut(s)	790
Bsp1286I	GDGCHC	2 cut(s)	464, 794
Bsp1407I	TGTACA	1 cut(s)	478
Bsp143I	GATC	5 cut(s)	454, 802, 1100, 1153, 1306
Bsp19I	CCATGG	2 cut(s)	794, 1191
BspACI	CCGC	2 cut(s)	74, 437
BspANI	GGCC	2 cut(s)	134, 792
BspCNI	CTCAG	4 cut(s)	142, 556, 1130, 1261
BspDI	ATCGAT	1 cut(s)	1099
BspFNI	CGCG	1 cut(s)	1311
BspLI	GGNNCC	3 cut(s)	792, 1089, 1090
BspOI	GCTAGC	1 cut(s)	720
BspPI	GGATC	1 cut(s)	1161
BspT104I	TTCGAA	1 cut(s)	228
BspTNI	GGTCTC	1 cut(s)	560
BsrDI	GCAATG	2 cut(s)	432, 892
BsrGI	TGTACA	1 cut(s)	478
BsrI	ACTGG	2 cut(s)	191, 678
BssECI	CCNNGG	4 cut(s)	794, 1191, 1236, 1320
BssMI	GATC	5 cut(s)	454, 802, 1100, 1153, 1306
BssNI	GRCGYC	2 cut(s)	298, 855
BssT1I	CCWWGG	4 cut(s)	794, 1191, 1236, 1320
Bst2UI	CCWGG	1 cut(s)	136
Bst4CI	ACNGT	6 cut(s)	551, 578, 628, 845, 1182, 1251
BstACI	GRCGYC	2 cut(s)	298, 855
BstAPI	GCANNNNNTGC	1 cut(s)	71
BstAUI	TGTACA	1 cut(s)	478
BstBI	TTCGAA	1 cut(s)	228
BstC8I	GCNNGC	3 cut(s)	718, 722, 1266
BstDEI	CTNAG	6 cut(s)	119, 150, 564, 1117, 1217, 1269
BstDSI	CCRYGG	2 cut(s)	794, 1191
BstF5I	GGATG	4 cut(s)	22, 298, 481, 525
BstFNI	CGCG	1 cut(s)	1311
BstKTI	GATC	5 cut(s)	457, 805, 1103, 1156, 1309
BstMAI	GTCTC	1 cut(s)	560
BstMBI	GATC	5 cut(s)	454, 802, 1100, 1153, 1306
BstMWI	GCNNNNNNNGC	2 cut(s)	71, 1232
BstNI	CCWGG	1 cut(s)	136
BstNSI	RCATGY	1 cut(s)	1147
BstSCI	CCNGG	1 cut(s)	134
BstSLI	GKGCMC	1 cut(s)	794
BstUI	CGCG	1 cut(s)	1311
BstV1I	GCAGC	5 cut(s)	72, 102, 711, 1210, 1285
Bsu15I	ATCGAT	1 cut(s)	1099
BsuRI	GGCC	2 cut(s)	134, 792
BsuTUI	ATCGAT	1 cut(s)	1099
BtgI	CCRYGG	2 cut(s)	794, 1191
BtsCI	GGATG	4 cut(s)	22, 298, 481, 525
BtsI	GCAGTG	1 cut(s)	654
BtsIMutI	CAGTG	3 cut(s)	184, 624, 654
Cac8I	GCNNGC	3 cut(s)	718, 722, 1266
Cfr13I	GGNCC	5 cut(s)	132, 790, 791, 841, 1088
ClaI	ATCGAT	1 cut(s)	1099
CseI	GACGC	2 cut(s)	306, 863
Csp6I	GTAC	6 cut(s)	379, 386, 479, 671, 744, 750
CviAII	CATG	7 cut(s)	98, 278, 383, 795, 980, 1144, 1192
CviQI	GTAC	6 cut(s)	379, 386, 479, 671, 744, 750
DdeI	CTNAG	6 cut(s)	119, 150, 564, 1117, 1217, 1269
DpnI	GATC	5 cut(s)	456, 804, 1102, 1155, 1308
DpnII	GATC	5 cut(s)	454, 802, 1100, 1153, 1306
DriI	GACNNNNNGTC	2 cut(s)	302, 994
Eam1105I	GACNNNNNGTC	2 cut(s)	302, 994
Eco130I	CCWWGG	4 cut(s)	794, 1191, 1236, 1320
Eco24I	GRGCYC	1 cut(s)	794
Eco31I	GGTCTC	1 cut(s)	560
Eco47I	GGWCC	2 cut(s)	841, 1088
Eco57I	CTGAAG	5 cut(s)	521, 1077, 1095, 1194, 1313
EcoO109I	RGGNCCY	2 cut(s)	790, 1088
EcoRI	GAATTC	1 cut(s)	230
EcoRII	CCWGG	1 cut(s)	134
EcoT14I	CCWWGG	4 cut(s)	794, 1191, 1236, 1320
EcoT22I	ATGCAT	1 cut(s)	1149
EcoT38I	GRGCYC	1 cut(s)	794
ErhI	CCWWGG	4 cut(s)	794, 1191, 1236, 1320
FaeI	CATG	7 cut(s)	101, 281, 386, 798, 983, 1147, 1195
FalI	AAGNNNNNCTT	2 cut(s)	1368, 1400
FaqI	GGGAC	1 cut(s)	1074
FatI	CATG	7 cut(s)	97, 277, 382, 794, 979, 1143, 1191
FauNDI	CATATG	2 cut(s)	111, 1149
FbaI	TGATCA	1 cut(s)	454
FblI	GTMKAC	1 cut(s)	1253
Fnu4HI	GCNGC	6 cut(s)	86, 116, 438, 725, 1224, 1299
FokI	GGATG	4 cut(s)	29, 305, 488, 512
FriOI	GRGCYC	1 cut(s)	794
Fsp4HI	GCNGC	6 cut(s)	86, 116, 438, 725, 1224, 1299
FspBI	CTAG	4 cut(s)	717, 806, 867, 1388
GluI	GCNGC	6 cut(s)	86, 116, 438, 725, 1224, 1299
GsuI	CTGGAG	1 cut(s)	208
HaeIII	GGCC	2 cut(s)	134, 792
HapII	CCGG	1 cut(s)	882
HgaI	GACGC	2 cut(s)	306, 863
Hin1I	GRCGYC	2 cut(s)	298, 855
Hin1II	CATG	7 cut(s)	101, 281, 386, 798, 983, 1147, 1195
HincII	GTYRAC	3 cut(s)	547, 853, 1185
HindII	GTYRAC	3 cut(s)	547, 853, 1185
HindIII	AAGCTT	1 cut(s)	1214
HinfI	GANTC	9 cut(s)	332, 893, 923, 938, 953, 968, 995, 1010, 1106
HpaII	CCGG	1 cut(s)	882
HphI	GGTGA	2 cut(s)	563, 1211
Hpy166II	GTNNAC	4 cut(s)	547, 853, 1185, 1254
Hpy188III	TCNNGA	5 cut(s)	253, 563, 603, 806, 1304
Hpy8I	GTNNAC	4 cut(s)	547, 853, 1185, 1254
HpyCH4III	ACNGT	6 cut(s)	551, 578, 628, 845, 1182, 1251
HpyCH4IV	ACGT	1 cut(s)	404
HpyCH4V	TGCA	6 cut(s)	29, 349, 412, 515, 659, 1147
HpyF10VI	GCNNNNNNNGC	2 cut(s)	71, 1232
HpyF3I	CTNAG	6 cut(s)	119, 150, 564, 1117, 1217, 1269
HpySE526I	ACGT	1 cut(s)	404
Hsp92I	GRCGYC	2 cut(s)	298, 855
Hsp92II	CATG	7 cut(s)	101, 281, 386, 798, 983, 1147, 1195
KflI	GGGWCCC	1 cut(s)	1088
Ksp22I	TGATCA	1 cut(s)	454
Kzo9I	GATC	5 cut(s)	454, 802, 1100, 1153, 1306
LmnI	GCTCC	2 cut(s)	186, 1381
Lsp1109I	GCAGC	5 cut(s)	72, 102, 711, 1210, 1285
LweI	GCATC	2 cut(s)	16, 283
MaeI	CTAG	4 cut(s)	717, 806, 867, 1388
MaeII	ACGT	1 cut(s)	404
MaeIII	GTNAC	2 cut(s)	352, 551
MalI	GATC	5 cut(s)	456, 804, 1102, 1155, 1308
MboI	GATC	5 cut(s)	454, 802, 1100, 1153, 1306
MboII	GAAGA	9 cut(s)	62, 89, 454, 829, 1057, 1070, 1073, 1088, 1187
MhlI	GDGCHC	2 cut(s)	464, 794
MluCI	AATT	8 cut(s)	53, 197, 230, 240, 416, 556, 708, 829
MlyI	GAGTC	5 cut(s)	932, 947, 977, 1004, 1019
MmeI	TCCRAC	4 cut(s)	553, 966, 978, 1008
Mph1103I	ATGCAT	1 cut(s)	1149
MroXI	GAANNNNTTC	1 cut(s)	54
MseI	TTAA	4 cut(s)	38, 128, 1314, 1371
MslI	CAYNNNNRTG	2 cut(s)	215, 1148
MspI	CCGG	1 cut(s)	882
MspR9I	CCNGG	1 cut(s)	136
MvaI	CCWGG	1 cut(s)	136
MvnI	CGCG	1 cut(s)	1311
MwoI	GCNNNNNNNGC	2 cut(s)	71, 1232
NcoI	CCATGG	2 cut(s)	794, 1191
NdeI	CATATG	2 cut(s)	111, 1149
NdeII	GATC	5 cut(s)	454, 802, 1100, 1153, 1306
NheI	GCTAGC	1 cut(s)	716
NlaIII	CATG	7 cut(s)	101, 281, 386, 798, 983, 1147, 1195
NlaIV	GGNNCC	3 cut(s)	792, 1089, 1090
NmuCI	GTSAC	2 cut(s)	352, 551
NsiI	ATGCAT	1 cut(s)	1149
NspI	RCATGY	1 cut(s)	1147
NspV	TTCGAA	1 cut(s)	228
PdmI	GAANNNNTTC	1 cut(s)	54
PfeI	GAWTC	4 cut(s)	332, 893, 953, 1106
PkrI	GCNGC	6 cut(s)	87, 117, 439, 726, 1225, 1300
PleI	GAGTC	5 cut(s)	931, 946, 976, 1003, 1018
PpsI	GAGTC	5 cut(s)	931, 946, 976, 1003, 1018
PpuMI	RGGWCCY	1 cut(s)	1088
Psp5II	RGGWCCY	1 cut(s)	1088
Psp6I	CCWGG	1 cut(s)	134
PspGI	CCWGG	1 cut(s)	134
PspN4I	GGNNCC	3 cut(s)	792, 1089, 1090
PspOMI	GGGCCC	1 cut(s)	790
PspPI	GGNCC	5 cut(s)	132, 790, 791, 841, 1088
PspPPI	RGGWCCY	1 cut(s)	1088
RsaI	GTAC	6 cut(s)	380, 387, 480, 672, 745, 751
RsaNI	GTAC	6 cut(s)	379, 386, 479, 671, 744, 750
RseI	CAYNNNNRTG	2 cut(s)	215, 1148
SaqAI	TTAA	4 cut(s)	38, 128, 1314, 1371
SatI	GCNGC	6 cut(s)	86, 116, 438, 725, 1224, 1299
Sau3AI	GATC	5 cut(s)	454, 802, 1100, 1153, 1306
Sau96I	GGNCC	5 cut(s)	132, 790, 791, 841, 1088
SchI	GAGTC	5 cut(s)	932, 947, 977, 1004, 1019
ScrFI	CCNGG	1 cut(s)	136
SduI	GDGCHC	2 cut(s)	464, 794
SfaNI	GCATC	2 cut(s)	16, 283
SfuI	TTCGAA	1 cut(s)	228
SinI	GGWCC	2 cut(s)	841, 1088
SmiMI	CAYNNNNRTG	2 cut(s)	215, 1148
Sse9I	AATT	8 cut(s)	53, 197, 230, 240, 416, 556, 708, 829
SsiI	CCGC	2 cut(s)	74, 437
SspI	AATATT	1 cut(s)	260
SspMI	CTAG	4 cut(s)	717, 806, 867, 1388
StyD4I	CCNGG	1 cut(s)	134
StyI	CCWWGG	4 cut(s)	794, 1191, 1236, 1320
TaaI	ACNGT	6 cut(s)	551, 578, 628, 845, 1182, 1251
TaiI	ACGT	1 cut(s)	407
TaqI	TCGA	3 cut(s)	228, 956, 1099
TasI	AATT	8 cut(s)	53, 197, 230, 240, 416, 556, 708, 829
TatI	WGTACW	3 cut(s)	478, 670, 749
TauI	GCSGC	1 cut(s)	440
TfiI	GAWTC	4 cut(s)	332, 893, 953, 1106
Tru1I	TTAA	4 cut(s)	38, 128, 1314, 1371
Tru9I	TTAA	4 cut(s)	38, 128, 1314, 1371
TscAI	CASTG	3 cut(s)	191, 631, 661
TseFI	GTSAC	2 cut(s)	352, 551
TseI	GCWGC	5 cut(s)	85, 115, 724, 1223, 1298
Tsp45I	GTSAC	2 cut(s)	352, 551
TspDTI	ATGAA	6 cut(s)	261, 574, 830, 966, 1097, 1374
TspRI	CASTG	3 cut(s)	191, 631, 661
VpaK11BI	GGWCC	2 cut(s)	841, 1088
XapI	RAATTY	4 cut(s)	53, 197, 230, 416
XbaI	TCTAGA	1 cut(s)	805
XceI	RCATGY	1 cut(s)	1147
XmiI	GTMKAC	1 cut(s)	1253
XmnI	GAANNNNTTC	1 cut(s)	54
XspI	CTAG	4 cut(s)	717, 806, 867, 1388
Zsp2I	ATGCAT	1 cut(s)	1149

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.