Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0001414

Physical Location & Seq

Genomic Coordinates Forward (+)

17630036 .. 17636006

Gene Structure 5971 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG137700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1566 bp

ATGTCTGCACCTGATGCTGATGGACGTCCTGCTGAAAACTCTGAGGATGAGAAGAAAACAAAGCTTGGGTCTTTTAAGAAGGCAATTTCGAATTCCTTCAATAAGGGTCGCAGGAACAGTAAGGTAATGTCTTTTCCTATGGATGACATTGATGCAGAGGAGTTAAAGTCAGCCGAAGAATTTCGGCAAGCACTTATTGCGGAAGAACTGCTGCCTTCAAAACATGATGATACTCATATGCTGCTAAGATTTTTAAGGGCCAGGAAGTTCGACCCTGAGAAAACAAAGCAAATGTGGTCTGATATGCTCCACTGGAGGAAGGAGTTCGGTTCTGACACTATTATGGAGGACTTCGAATTCAAGGAAATTGATGAAGTCTTGAAATATTATCCACAAGGGCATCATGGAGTTGATAAGGATGGACGCCCTGTCTATATTGAGAAACTTGGTCAAGTAGATTCTAACAAGCTGTTGCAAGTGACAACAATGGACAGATATGTGAAGTACCATGTACGGGAGTTTGAGAGGACATTTGTGCATAAATTCCCTGCCTGTTCCATTGCGGCGAAGAAGCACATTGATCAGAGCACTACCATTTTGGATGTACAAGGAGTGGGGCTGACAAGTTTGAACAAATCTGCAAGGGAACTCATCCAACGCCTTCAGAAAGTTGACGGTGACAATTATCCTGAGACCCTGAACCGTATGTTCATCATCAATGCTGGTTCTGGATTTAGGCTCTTATGGAACACTGTCAAATCTTTTCTTGACCCGAAGACCACTGCAAAAATCAATGTACTGGGAAACCAATACCAAAGCAAGTTGCTTGAAATAATTGAAGCTAGCGAGCTGCCAGAGTTTTTGGGAGGTACTTGTACTTGTTCTGATAAGGGTGGCTGTATGCTTTCTGATAAGGGCCCATGGAATGATCTAGAAATAATGAAGATGGTTCAGAATTATGGCGAGGACCGTGAGGTTGACGCCAAATCCTCTAGCACAACTATATCCGGCAATGTGGATTCAAGCAATAAGGAGTTGGGCAAAAAGGAGTCAGGCAAAAAGGAGTCTGGCAAAAATGAATCGAGTAAAAATGAGTCGGGCAAACATGAGTTGGACAAGAAGGAGTCGGACAAGAAGGAGTCAGACAAGAAGGAGTTGGACAAGAAGGAGGAGAAGAAGGTCGCTGAAGAAGAAAAAATCTCTGAAGATATGAAGGGTCCCCCAAATCGATCTGATTCAGTCTGCTCAGAGGCTTTTTTGGAGGCTAATGACATGCATATGGATCATCTCTCTCCTGTGCCTGAAGAACTGTCAACTCCCATGGGAGGTGAAAAAGAGGAAAAGCTTAGAGCTGCTCTTACTGCCTTGGAACAACAACTGTCTACAACCAAGCAGGCTGAGGTTGAGAAAGAGCAAAAGCTGAAGGCTGCTCTTGATCGCGTTAATGCCTTGGAACAAGAGCTAACGGAAACCAAGAAGGCACTTGATGAAGCCCGTGTTAAACAAGAGGAGCTTCTAGCCTCTGTTGGGAAGGAAAAGAAGTTTGTATGTTTACTAAATGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0003006 GO:0003674 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005622 GO:0005623 GO:0005628 GO:0005634 GO:0006629 GO:0006644 GO:0006650 GO:0006656 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0008525 GO:0008526 GO:0008610 GO:0008654 GO:0009058 GO:0009653 GO:0009791 GO:0009908 GO:0009987 GO:0010876 GO:0010927 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016192 GO:0019637 GO:0019953 GO:0022402 GO:0022413 GO:0022414 GO:0022607 GO:0030154 GO:0030427 GO:0030435 GO:0030437 GO:0031321 GO:0031322 GO:0032153 GO:0032501 GO:0032502 GO:0032505 GO:0032989 GO:0033036 GO:0034293 GO:0035838 GO:0042763 GO:0042764 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043934 GO:0043935 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044464 GO:0044703 GO:0045017 GO:0046470 GO:0046474 GO:0046486 GO:0048193 GO:0048367 GO:0048468 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0051286 GO:0051321 GO:0051704 GO:0060187 GO:0061024 GO:0061458 GO:0071702 GO:0071704 GO:0071840 GO:0090407 GO:0090567 GO:0097164 GO:0120009 GO:0120010 GO:1901564 GO:1901566 GO:1901576 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRAL_TRIO CRAL_TRIO_N

Protein Analysis

521

Amino Acids

58.99

Weight (kDa)

5.58

Isoelectric Point (pI)

45.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRAL_TRIO_N	PF03765	60 - 100	1.2e-07	CRAL/TRIO, N-terminal domain
CRAL_TRIO	PF00650	128 - 290	6.7e-30	CRAL/TRIO domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001414)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16380 AT2G16380 AT2G16380 AT2G21540 AT2G21540 AT2G21540 AT2G21540 AT2G21540 AT2G21540 AT4G34580 AT4G34580 AT4G39180 AT4G39180 AT4G39180
fragaria_vesca	FvH4_2g09420 FvH4_2g09420 FvH4_2g09420 FvH4_2g09490 FvH4_2g09490
malus_domestica	MD05G1062700.v1.1 MD05G1062800.v1.1 MD05G1062900.v1.1 MD10G1070400.v1.1 MD10G1070500.v1.1
prunus_persica	Prupe.8G092000_v2.0.a1 Prupe.8G092100_v2.0.a1 Prupe.8G092200_v2.0.a1
pyrus_communis	pycom05g05440 pycom10g05620 pycom10g05630
rosa_chinensis	RchiOBHm_Chr6g0265701 RchiOBHm_Chr6g0265771
rosa_laevigata	RLG00000014161 RLG00000014165
rosa_multiflora	Rmu_co8114364.1_g000001 Rmu_sc0000208.1_g000028 Rmu_sc0008535.1_g000015
rosa_roxburghii	Rroxscaffold_175G00432510 Rroxscaffold_175G00432560 Rroxscaffold_7G00202430
rosa_rugosa	Rorug06G0018500 Rorug06G0019000
rosa_samantha	Rh6AG140700 Rh6AG141500 Rh6BG141100 Rh6BG141400 Rh6CG137700 Rh6CG138000 Rh6DG124600 Rh6DG125000
rosa_wichuraiana	Rw6G012170 Rw6G012230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	28
AccI	GTMKAC	1 cut(s)	1382
AccII	CGCG	1 cut(s)	1440
AciI	CCGC	2 cut(s)	200, 563
AclWI	GGATC	1 cut(s)	1290
AcsI	RAATTY	4 cut(s)	91, 179, 356, 542
AcuI	CTGAAG	5 cut(s)	647, 1206, 1224, 1323, 1442
AcyI	GRCGYC	3 cut(s)	25, 424, 981
AfaI	GTAC	6 cut(s)	506, 513, 606, 798, 871, 877
AfiI	CCNNNNNNNGG	3 cut(s)	514, 1325, 1527
AgsI	TTSAA	8 cut(s)	100, 219, 361, 382, 631, 830, 839, 1023
AhdI	GACNNNNNGTC	1 cut(s)	428
AjnI	CCWGG	1 cut(s)	260
AluBI	AGCT	9 cut(s)	64, 469, 842, 850, 1345, 1352, 1420, 1462, 1513
AluI	AGCT	9 cut(s)	64, 469, 842, 850, 1345, 1352, 1420, 1462, 1513
Alw21I	GWGCWC	1 cut(s)	590
Alw26I	GTCTC	1 cut(s)	686
AlwI	GGATC	1 cut(s)	1290
AoxI	GGCC	2 cut(s)	258, 916
ApaI	GGGCCC	1 cut(s)	920
ApeKI	GCWGC	5 cut(s)	211, 241, 850, 1352, 1427
ApoI	RAATTY	4 cut(s)	91, 179, 356, 542
ArsI	GACNNNNNNTTYG	2 cut(s)	53, 85
Asp700I	GAANNNNTTC	3 cut(s)	95, 180, 323
AspS9I	GGNCC	5 cut(s)	258, 916, 917, 967, 1217
AsuHPI	GGTGA	2 cut(s)	689, 1340
AsuII	TTCGAA	2 cut(s)	89, 354
AsuNHI	GCTAGC	1 cut(s)	842
AvaII	GGWCC	2 cut(s)	967, 1217
BaeGI	GKGCMC	1 cut(s)	920
BanII	GRGCYC	1 cut(s)	920
BbsI	GAAGAC	1 cut(s)	782
Bbv12I	GWGCWC	1 cut(s)	590
BbvCI	CCTCAGC	1 cut(s)	1398
BbvI	GCAGC	5 cut(s)	198, 228, 837, 1339, 1414
BccI	CCATC	3 cut(s)	14, 413, 940
BciT130I	CCWGG	1 cut(s)	262
BclI	TGATCA	1 cut(s)	580
BcoDI	GTCTC	1 cut(s)	686
BfaI	CTAG	4 cut(s)	843, 932, 993, 1517
BisI	GCNGC	6 cut(s)	212, 242, 564, 851, 1353, 1428
BlsI	GCNGC	6 cut(s)	213, 243, 565, 852, 1354, 1429
Bme1390I	CCNGG	1 cut(s)	262
Bme18I	GGWCC	2 cut(s)	967, 1217
BmeRI	GACNNNNNGTC	1 cut(s)	428
BmgT120I	GGNCC	5 cut(s)	258, 916, 917, 967, 1217
BmiI	GGNNCC	3 cut(s)	918, 1218, 1219
BmrFI	CCNGG	1 cut(s)	262
BmrI	ACTGGG	1 cut(s)	809
BmsI	GCATC	3 cut(s)	4, 142, 409
BmtI	GCTAGC	1 cut(s)	846
BmuI	ACTGGG	1 cut(s)	809
BpiI	GAAGAC	1 cut(s)	782
BpmI	CTGGAG	1 cut(s)	334
Bpu10I	CCTNAGC	1 cut(s)	1398
Bpu14I	TTCGAA	2 cut(s)	89, 354
Bsa29I	ATCGAT	1 cut(s)	1228
BsaHI	GRCGYC	3 cut(s)	25, 424, 981
BsaI	GGTCTC	1 cut(s)	686
BsaJI	CCNNGG	4 cut(s)	920, 1320, 1365, 1449
BsaXI	ACNNNNNCTCC	2 cut(s)	152, 182
Bsc4I	CCNNNNNNNGG	3 cut(s)	514, 1325, 1527
Bse1I	ACTGG	2 cut(s)	317, 804
Bse3DI	GCAATG	2 cut(s)	558, 1018
BseBI	CCWGG	1 cut(s)	262
BseCI	ATCGAT	1 cut(s)	1228
BseDI	CCNNGG	4 cut(s)	920, 1320, 1365, 1449
BseGI	GGATG	5 cut(s)	52, 148, 424, 607, 651
BseLI	CCNNNNNNNGG	3 cut(s)	514, 1325, 1527
BseMI	GCAATG	2 cut(s)	558, 1018
BseMII	CTCAG	5 cut(s)	33, 267, 681, 1260, 1389
BseNI	ACTGG	2 cut(s)	317, 804
BseRI	GAGGAG	3 cut(s)	173, 1184, 1523
BseSI	GKGCMC	1 cut(s)	920
BseXI	GCAGC	5 cut(s)	198, 228, 837, 1339, 1414
Bsh1236I	CGCG	1 cut(s)	1440
BshFI	GGCC	2 cut(s)	260, 918
BshVI	ATCGAT	1 cut(s)	1228
BsiHKAI	GWGCWC	1 cut(s)	590
BsiSI	CCGG	1 cut(s)	1008
BslFI	GGGAC	1 cut(s)	1203
BslI	CCNNNNNNNGG	3 cut(s)	514, 1325, 1527
BsmAI	GTCTC	1 cut(s)	686
BsmFI	GGGAC	1 cut(s)	1203
BsnI	GGCC	2 cut(s)	260, 918
Bso31I	GGTCTC	1 cut(s)	686
Bsp119I	TTCGAA	2 cut(s)	89, 354
Bsp120I	GGGCCC	1 cut(s)	916
Bsp1286I	GDGCHC	2 cut(s)	590, 920
Bsp1407I	TGTACA	1 cut(s)	604
Bsp143I	GATC	5 cut(s)	580, 928, 1229, 1282, 1435
Bsp19I	CCATGG	2 cut(s)	920, 1320
BspACI	CCGC	2 cut(s)	200, 563
BspANI	GGCC	2 cut(s)	260, 918
BspCNI	CTCAG	5 cut(s)	34, 268, 682, 1259, 1390
BspDI	ATCGAT	1 cut(s)	1228
BspFNI	CGCG	1 cut(s)	1440
BspLI	GGNNCC	3 cut(s)	918, 1218, 1219
BspOI	GCTAGC	1 cut(s)	846
BspPI	GGATC	1 cut(s)	1290
BspT104I	TTCGAA	2 cut(s)	89, 354
BspTNI	GGTCTC	1 cut(s)	686
BsrDI	GCAATG	2 cut(s)	558, 1018
BsrGI	TGTACA	1 cut(s)	604
BsrI	ACTGG	2 cut(s)	317, 804
BssECI	CCNNGG	4 cut(s)	920, 1320, 1365, 1449
BssMI	GATC	5 cut(s)	580, 928, 1229, 1282, 1435
BssNI	GRCGYC	3 cut(s)	25, 424, 981
BssT1I	CCWWGG	4 cut(s)	920, 1320, 1365, 1449
Bst2UI	CCWGG	1 cut(s)	262
Bst4CI	ACNGT	7 cut(s)	119, 677, 704, 754, 971, 1311, 1380
BstACI	GRCGYC	3 cut(s)	25, 424, 981
BstAPI	GCANNNNNTGC	2 cut(s)	14, 197
BstAUI	TGTACA	1 cut(s)	604
BstBI	TTCGAA	2 cut(s)	89, 354
BstC8I	GCNNGC	4 cut(s)	189, 844, 848, 1395
BstDEI	CTNAG	7 cut(s)	42, 245, 276, 690, 1246, 1346, 1398
BstDSI	CCRYGG	2 cut(s)	920, 1320
BstF5I	GGATG	5 cut(s)	52, 148, 424, 607, 651
BstFNI	CGCG	1 cut(s)	1440
BstKTI	GATC	5 cut(s)	583, 931, 1232, 1285, 1438
BstMAI	GTCTC	1 cut(s)	686
BstMBI	GATC	5 cut(s)	580, 928, 1229, 1282, 1435
BstMWI	GCNNNNNNNGC	3 cut(s)	14, 197, 1361
BstNI	CCWGG	1 cut(s)	262
BstNSI	RCATGY	1 cut(s)	1276
BstSCI	CCNGG	1 cut(s)	260
BstSLI	GKGCMC	1 cut(s)	920
BstUI	CGCG	1 cut(s)	1440
BstV1I	GCAGC	5 cut(s)	198, 228, 837, 1339, 1414
BstV2I	GAAGAC	1 cut(s)	782
Bsu15I	ATCGAT	1 cut(s)	1228
BsuRI	GGCC	2 cut(s)	260, 918
BsuTUI	ATCGAT	1 cut(s)	1228
BtgI	CCRYGG	2 cut(s)	920, 1320
BtsCI	GGATG	5 cut(s)	52, 148, 424, 607, 651
BtsI	GCAGTG	1 cut(s)	780
BtsIMutI	CAGTG	3 cut(s)	310, 750, 780
Cac8I	GCNNGC	4 cut(s)	189, 844, 848, 1395
Cfr13I	GGNCC	5 cut(s)	258, 916, 917, 967, 1217
ClaI	ATCGAT	1 cut(s)	1228
CseI	GACGC	2 cut(s)	432, 989
Csp6I	GTAC	6 cut(s)	505, 512, 605, 797, 870, 876
CviAII	CATG	7 cut(s)	224, 404, 509, 921, 1106, 1273, 1321
CviQI	GTAC	6 cut(s)	505, 512, 605, 797, 870, 876
DdeI	CTNAG	7 cut(s)	42, 245, 276, 690, 1246, 1346, 1398
DpnI	GATC	5 cut(s)	582, 930, 1231, 1284, 1437
DpnII	GATC	5 cut(s)	580, 928, 1229, 1282, 1435
DriI	GACNNNNNGTC	1 cut(s)	428
Eam1105I	GACNNNNNGTC	1 cut(s)	428
Eco130I	CCWWGG	4 cut(s)	920, 1320, 1365, 1449
Eco24I	GRGCYC	1 cut(s)	920
Eco31I	GGTCTC	1 cut(s)	686
Eco47I	GGWCC	2 cut(s)	967, 1217
Eco57I	CTGAAG	5 cut(s)	647, 1206, 1224, 1323, 1442
EcoO109I	RGGNCCY	2 cut(s)	916, 1217
EcoRI	GAATTC	2 cut(s)	91, 356
EcoRII	CCWGG	1 cut(s)	260
EcoT14I	CCWWGG	4 cut(s)	920, 1320, 1365, 1449
EcoT22I	ATGCAT	1 cut(s)	1278
EcoT38I	GRGCYC	1 cut(s)	920
ErhI	CCWWGG	4 cut(s)	920, 1320, 1365, 1449
FaeI	CATG	7 cut(s)	227, 407, 512, 924, 1109, 1276, 1324
FalI	AAGNNNNNCTT	2 cut(s)	1497, 1529
FaqI	GGGAC	1 cut(s)	1203
FatI	CATG	7 cut(s)	223, 403, 508, 920, 1105, 1272, 1320
FauNDI	CATATG	2 cut(s)	237, 1278
FbaI	TGATCA	1 cut(s)	580
FblI	GTMKAC	1 cut(s)	1382
Fnu4HI	GCNGC	6 cut(s)	212, 242, 564, 851, 1353, 1428
FokI	GGATG	5 cut(s)	59, 155, 431, 614, 638
FriOI	GRGCYC	1 cut(s)	920
Fsp4HI	GCNGC	6 cut(s)	212, 242, 564, 851, 1353, 1428
FspBI	CTAG	4 cut(s)	843, 932, 993, 1517
GluI	GCNGC	6 cut(s)	212, 242, 564, 851, 1353, 1428
GsuI	CTGGAG	1 cut(s)	334
HaeIII	GGCC	2 cut(s)	260, 918
HapII	CCGG	1 cut(s)	1008
HgaI	GACGC	2 cut(s)	432, 989
Hin1I	GRCGYC	3 cut(s)	25, 424, 981
Hin1II	CATG	7 cut(s)	227, 407, 512, 924, 1109, 1276, 1324
HincII	GTYRAC	3 cut(s)	673, 979, 1314
HindII	GTYRAC	3 cut(s)	673, 979, 1314
HindIII	AAGCTT	2 cut(s)	62, 1343
HinfI	GANTC	9 cut(s)	458, 1019, 1049, 1064, 1079, 1094, 1124, 1139, 1235
HpaII	CCGG	1 cut(s)	1008
HphI	GGTGA	2 cut(s)	689, 1340
Hpy166II	GTNNAC	5 cut(s)	673, 979, 1314, 1383, 1553
Hpy188III	TCNNGA	6 cut(s)	379, 689, 729, 767, 932, 1433
Hpy8I	GTNNAC	5 cut(s)	673, 979, 1314, 1383, 1553
HpyCH4III	ACNGT	7 cut(s)	119, 677, 704, 754, 971, 1311, 1380
HpyCH4IV	ACGT	1 cut(s)	25
HpyCH4V	TGCA	7 cut(s)	8, 155, 475, 538, 641, 785, 1276
HpyF10VI	GCNNNNNNNGC	3 cut(s)	14, 197, 1361
HpyF3I	CTNAG	7 cut(s)	42, 245, 276, 690, 1246, 1346, 1398
HpySE526I	ACGT	1 cut(s)	25
Hsp92I	GRCGYC	3 cut(s)	25, 424, 981
Hsp92II	CATG	7 cut(s)	227, 407, 512, 924, 1109, 1276, 1324
KflI	GGGWCCC	1 cut(s)	1217
Ksp22I	TGATCA	1 cut(s)	580
Kzo9I	GATC	5 cut(s)	580, 928, 1229, 1282, 1435
LmnI	GCTCC	2 cut(s)	312, 1510
Lsp1109I	GCAGC	5 cut(s)	198, 228, 837, 1339, 1414
LweI	GCATC	3 cut(s)	4, 142, 409
MaeI	CTAG	4 cut(s)	843, 932, 993, 1517
MaeII	ACGT	1 cut(s)	25
MaeIII	GTNAC	2 cut(s)	478, 677
MalI	GATC	5 cut(s)	582, 930, 1231, 1284, 1437
MboI	GATC	5 cut(s)	580, 928, 1229, 1282, 1435
MhlI	GDGCHC	2 cut(s)	590, 920
MluCI	AATT	9 cut(s)	84, 91, 179, 356, 366, 542, 682, 834, 955
MlyI	GAGTC	5 cut(s)	1058, 1073, 1103, 1133, 1148
MmeI	TCCRAC	4 cut(s)	679, 1092, 1107, 1137
Mph1103I	ATGCAT	1 cut(s)	1278
MroXI	GAANNNNTTC	3 cut(s)	95, 180, 323
MseI	TTAA	5 cut(s)	75, 164, 254, 1443, 1500
MslI	CAYNNNNRTG	2 cut(s)	341, 1277
MspI	CCGG	1 cut(s)	1008
MspR9I	CCNGG	1 cut(s)	262
MvaI	CCWGG	1 cut(s)	262
MvnI	CGCG	1 cut(s)	1440
MwoI	GCNNNNNNNGC	3 cut(s)	14, 197, 1361
NcoI	CCATGG	2 cut(s)	920, 1320
NdeI	CATATG	2 cut(s)	237, 1278
NdeII	GATC	5 cut(s)	580, 928, 1229, 1282, 1435
NheI	GCTAGC	1 cut(s)	842
NlaIII	CATG	7 cut(s)	227, 407, 512, 924, 1109, 1276, 1324
NlaIV	GGNNCC	3 cut(s)	918, 1218, 1219
NmuCI	GTSAC	2 cut(s)	478, 677
NsiI	ATGCAT	1 cut(s)	1278
NspI	RCATGY	1 cut(s)	1276
NspV	TTCGAA	2 cut(s)	89, 354
PdmI	GAANNNNTTC	3 cut(s)	95, 180, 323
PfeI	GAWTC	4 cut(s)	458, 1019, 1079, 1235
PkrI	GCNGC	6 cut(s)	213, 243, 565, 852, 1354, 1429
PleI	GAGTC	5 cut(s)	1057, 1072, 1102, 1132, 1147
PpsI	GAGTC	5 cut(s)	1057, 1072, 1102, 1132, 1147
PpuMI	RGGWCCY	1 cut(s)	1217
Psp5II	RGGWCCY	1 cut(s)	1217
Psp6I	CCWGG	1 cut(s)	260
PspGI	CCWGG	1 cut(s)	260
PspN4I	GGNNCC	3 cut(s)	918, 1218, 1219
PspOMI	GGGCCC	1 cut(s)	916
PspPI	GGNCC	5 cut(s)	258, 916, 917, 967, 1217
PspPPI	RGGWCCY	1 cut(s)	1217
RsaI	GTAC	6 cut(s)	506, 513, 606, 798, 871, 877
RsaNI	GTAC	6 cut(s)	505, 512, 605, 797, 870, 876
RseI	CAYNNNNRTG	2 cut(s)	341, 1277
SaqAI	TTAA	5 cut(s)	75, 164, 254, 1443, 1500
SatI	GCNGC	6 cut(s)	212, 242, 564, 851, 1353, 1428
Sau3AI	GATC	5 cut(s)	580, 928, 1229, 1282, 1435
Sau96I	GGNCC	5 cut(s)	258, 916, 917, 967, 1217
SchI	GAGTC	5 cut(s)	1058, 1073, 1103, 1133, 1148
ScrFI	CCNGG	1 cut(s)	262
SduI	GDGCHC	2 cut(s)	590, 920
SfaNI	GCATC	3 cut(s)	4, 142, 409
SfuI	TTCGAA	2 cut(s)	89, 354
SinI	GGWCC	2 cut(s)	967, 1217
SmiMI	CAYNNNNRTG	2 cut(s)	341, 1277
Sse9I	AATT	9 cut(s)	84, 91, 179, 356, 366, 542, 682, 834, 955
SsiI	CCGC	2 cut(s)	200, 563
SspI	AATATT	1 cut(s)	386
SspMI	CTAG	4 cut(s)	843, 932, 993, 1517
StyD4I	CCNGG	1 cut(s)	260
StyI	CCWWGG	4 cut(s)	920, 1320, 1365, 1449
TaaI	ACNGT	7 cut(s)	119, 677, 704, 754, 971, 1311, 1380
TaiI	ACGT	1 cut(s)	28
TaqI	TCGA	5 cut(s)	89, 270, 354, 1082, 1228
TasI	AATT	9 cut(s)	84, 91, 179, 356, 366, 542, 682, 834, 955
TatI	WGTACW	3 cut(s)	604, 796, 875
TauI	GCSGC	1 cut(s)	566
TfiI	GAWTC	4 cut(s)	458, 1019, 1079, 1235
Tru1I	TTAA	5 cut(s)	75, 164, 254, 1443, 1500
Tru9I	TTAA	5 cut(s)	75, 164, 254, 1443, 1500
TscAI	CASTG	3 cut(s)	317, 757, 787
TseFI	GTSAC	2 cut(s)	478, 677
TseI	GCWGC	5 cut(s)	211, 241, 850, 1352, 1427
Tsp45I	GTSAC	2 cut(s)	478, 677
TspDTI	ATGAA	6 cut(s)	387, 700, 956, 1092, 1226, 1503
TspGWI	ACGGA	1 cut(s)	1481
TspRI	CASTG	3 cut(s)	317, 757, 787
VpaK11BI	GGWCC	2 cut(s)	967, 1217
XapI	RAATTY	4 cut(s)	91, 179, 356, 542
XbaI	TCTAGA	1 cut(s)	931
XceI	RCATGY	1 cut(s)	1276
XmiI	GTMKAC	1 cut(s)	1382
XmnI	GAANNNNTTC	3 cut(s)	95, 180, 323
XspI	CTAG	4 cut(s)	843, 932, 993, 1517
ZraI	GACGTC	1 cut(s)	26
Zsp2I	ATGCAT	1 cut(s)	1278

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.