Prupe.8G092100_v2.0.a1

Phosphatidylinositol phosphatidylcholine transfer protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
12503695 .. 12508926
5232 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G092100.1

Sequence Viewer

Length: 1629 bp
ATGTTTTGGGGTCATGGGTTCAGATTTTTGGTTTCAGCCCAATACATTTTTGACAGAAGAAGATCAAAAATTGTTTCTCTTAATCAAATATCAACACAACTGGATGAAAACTCTGAGGATGAGAGGAAAACAAAGCTTGGGTCTTTTAAGAAGGCAGCCAACATGATTACAAACTCCTTCAATAAGGGTCGAAGGAACAGCAAGGTAATGTCTTTCCCTATGGAGGATGACATTGATGCAGAGGAGCTAAAGGCAGCTCAGGAACTCCGGCAAGCACTTATCTCGGAAGAACTACTGCCCTCAAAACATGATGATACTCATATGATGCTAAGATTTCTAAGGGCCCGGAAATTTGACCTTGAGAAAACAAAGCAAATGTGGTCTGACATGCTACAGTGGAGGCAGGAATTTGGTGCTGACACTATTATGGAGGACTTTGAGTTCAAGGAAGTTGATGAAGTCTTGAAATACTATCCACAAGGGCATCATGGAGTTGATAAGGATGGACGACCGGTCTACATGGAGAGACTTGGTCAAGTTGATTCTAACAAACTGATGCAAGTGACGTCAATGGAACGTTATGTGAAGTACCACATACGGGAGTTTGAGAGGACCTTTATATGTAAATTCCCTGCCTGTTCCATTGCAGCAAAGAAGCACATTGATCAGAGCACCACAATTCTGGATGTACAAGGAGTGGGGCTTACAAGCTTAAATAAATCTGCAAGGGAACTTATCCAGCGCCTTCAGAAGGTTGATGGTGACAATTATCCTGAGACCCTGAACCGTATGTTCATCATCAATGCTGGTTCTGGATTTAGGCTCTTATGGAACACTGTCAAATCTTTCCTTGATCCCAAGACCACTGCAAAAATTAACGTTCTTGGAAATCAATACCAGAGCAAGTTGCTTGAAATAATTGAGGCTAGCGAGCTGCCAGAGTTTTTGGGTGGTACTTGTACTTGTGCTGATAAGGGTGGCTGTATGATATCAGATAAGGGCCCATGGAACGATCCAGAAATAATGAAGATGGTTCAGAGTTATCGTGAGGCAAAAAGCACAAACAACACTCCATCAGGTGATATGGAGGAGAAAGAAGAGAAAGAGGAGAAAGAGGAGAAAAAGGAGAAAAAGGAGAAAGAGGAGAAGACAATCTCTGAACCGGAGAAGACAATCTCTGAACCGGAGAAGACACTCTCTGATGAGGAGAAGATAATCTCTGAAGATGATCGGGCTTGCACAAATAGAATGGATTCTTTCTGCTCAGAAACCTTTTTAGAGGCTGAAATGCATGTGGATCATCTCTCCTCTGTGCCTGAAGATCTTTTAACTCCCAGAATATGTAATAGCCCATATTTTGAGGCAATGGTTGACAAGGGAACTGAGAAAGAGGCCGAAAAGCTGAACGCTGCTCTCAACCGACTCAGTGCCTTAGAACAAGAGCTGTCCTCAACCAAGCAGGTTGAGACTCAAAAGGAGGAAAAGCTGAAGGCTGCTCTTGACCGCGTCAATGCTTTGGAACAAGAGCTGTCAGAAGCCAAGAAAGCACTTGAGGAAGCCCGCCATAAACAGGAGGAGCTTCTAGCCTCAGTTGACAAGGAAAAGAAGTTTAGTTTATTCTGTTGGTGA

Protein Analysis

543

Amino Acids

62.59

Weight (kDa)

5.32

Isoelectric Point (pI)

47.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 569
Acc36I ACCTGC 1 cut(s) 1450
AccI GTMKAC 1 cut(s) 516
AccII CGCG 1 cut(s) 1506
AciI CCGC 2 cut(s) 1504, 1561
AclI AACGTT 2 cut(s) 577, 879
AclWI GGATC 3 cut(s) 848, 1007, 1305
AcsI RAATTY 3 cut(s) 350, 407, 626
AcuI CTGAAG 4 cut(s) 731, 1242, 1338, 1508
AcyI GRCGYC 1 cut(s) 566
AfaI GTAC 4 cut(s) 590, 690, 955, 961
AfiI CCNNNNNNNGG 4 cut(s) 223, 598, 751, 1570
AgeI ACCGGT 1 cut(s) 511
AgsI TTSAA 4 cut(s) 181, 445, 466, 914
AhdI GACNNNNNGTC 1 cut(s) 512
AloI GAACNNNNNNTCC 2 cut(s) 425, 457
Alw21I GWGCWC 1 cut(s) 674
Alw26I GTCTC 3 cut(s) 520, 770, 1460
AlwI GGATC 3 cut(s) 848, 1007, 1305
AoxI GGCC 3 cut(s) 342, 1000, 1392
ApaI GGGCCC 2 cut(s) 346, 1004
ApeKI GCWGC 6 cut(s) 155, 254, 647, 934, 1409, 1493
ApoI RAATTY 3 cut(s) 350, 407, 626
ArsI GACNNNNNNTTYG 2 cut(s) 125, 157
AsiGI ACCGGT 1 cut(s) 511
Asp700I GAANNNNTTC 1 cut(s) 1252
AspLEI GCGC 1 cut(s) 744
AspS9I GGNCC 5 cut(s) 342, 343, 612, 1000, 1001
AsuC2I CCSGG 1 cut(s) 346
AsuHPI GGTGA 2 cut(s) 773, 1091
AsuNHI GCTAGC 1 cut(s) 926
AvaII GGWCC 1 cut(s) 612
BaeGI GKGCMC 2 cut(s) 346, 1004
BanII GRGCYC 2 cut(s) 346, 1004
BbsI GAAGAC 3 cut(s) 1154, 1175, 1196
Bbv12I GWGCWC 1 cut(s) 674
BbvI GCAGC 6 cut(s) 167, 266, 659, 921, 1396, 1480
BccI CCATC 4 cut(s) 497, 752, 1024, 1081
BcgI CGANNNNNNTGC 2 cut(s) 264, 298
BclI TGATCA 1 cut(s) 664
BcnI CCSGG 1 cut(s) 346
BcoDI GTCTC 3 cut(s) 520, 770, 1460
BfaI CTAG 2 cut(s) 927, 1583
BfmI CTRYAG 1 cut(s) 392
BfoI RGCGCY 1 cut(s) 745
BfuAI ACCTGC 1 cut(s) 1450
BglII AGATCT 1 cut(s) 1321
BisI GCNGC 6 cut(s) 156, 255, 648, 935, 1410, 1494
BlsI GCNGC 6 cut(s) 157, 256, 649, 936, 1411, 1495
Bme1390I CCNGG 1 cut(s) 346
Bme18I GGWCC 1 cut(s) 612
BmeRI GACNNNNNGTC 1 cut(s) 512
BmgT120I GGNCC 5 cut(s) 342, 343, 612, 1000, 1001
BmiI GGNNCC 2 cut(s) 344, 1002
BmrFI CCNGG 1 cut(s) 346
BmsI GCATC 4 cut(s) 226, 315, 493, 546
BmtI GCTAGC 1 cut(s) 930
BpiI GAAGAC 3 cut(s) 1154, 1175, 1196
BplI GAGNNNNNCTC 2 cut(s) 1433, 1465
Bpu10I CCTNAGC 1 cut(s) 258
BpuEI CTTGAG 2 cut(s) 380, 1571
BpuMI CCSGG 1 cut(s) 346
BsaHI GRCGYC 1 cut(s) 566
BsaI GGTCTC 1 cut(s) 770
BsaJI CCNNGG 1 cut(s) 1004
BsaWI WCCGGW 3 cut(s) 511, 1162, 1183
Bsc4I CCNNNNNNNGG 4 cut(s) 223, 598, 751, 1570
Bse118I RCCGGY 1 cut(s) 511
Bse1I ACTGG 1 cut(s) 105
Bse3DI GCAATG 2 cut(s) 642, 1371
BseDI CCNNGG 1 cut(s) 1004
BseGI GGATG 5 cut(s) 109, 124, 232, 508, 691
BseLI CCNNNNNNNGG 4 cut(s) 223, 598, 751, 1570
BseMI GCAATG 2 cut(s) 642, 1371
BseMII CTCAG 7 cut(s) 105, 272, 765, 1278, 1374, 1438, 1602
BseNI ACTGG 1 cut(s) 105
BseRI GAGGAG 8 cut(s) 257, 1103, 1121, 1130, 1157, 1220, 1297, 1589
BseSI GKGCMC 2 cut(s) 346, 1004
BseXI GCAGC 6 cut(s) 167, 266, 659, 921, 1396, 1480
Bsh1236I CGCG 1 cut(s) 1506
Bsh1285I CGRYCG 1 cut(s) 512
BshFI GGCC 3 cut(s) 344, 1002, 1394
BshTI ACCGGT 1 cut(s) 511
BsiEI CGRYCG 1 cut(s) 512
BsiHKAI GWGCWC 1 cut(s) 674
BsiSI CCGG 5 cut(s) 268, 346, 512, 1163, 1184
BslI CCNNNNNNNGG 4 cut(s) 223, 598, 751, 1570
BsmAI GTCTC 3 cut(s) 520, 770, 1460
BsnI GGCC 3 cut(s) 344, 1002, 1394
Bso31I GGTCTC 1 cut(s) 770
Bsp120I GGGCCC 2 cut(s) 342, 1000
Bsp1286I GDGCHC 3 cut(s) 346, 674, 1004
Bsp1407I TGTACA 1 cut(s) 688
Bsp143I GATC 7 cut(s) 62, 664, 853, 1012, 1228, 1297, 1321
Bsp19I CCATGG 1 cut(s) 1004
BspACI CCGC 2 cut(s) 1504, 1561
BspANI GGCC 3 cut(s) 344, 1002, 1394
BspCNI CTCAG 7 cut(s) 106, 271, 766, 1277, 1375, 1437, 1601
BspFNI CGCG 1 cut(s) 1506
BspLI GGNNCC 2 cut(s) 344, 1002
BspMI ACCTGC 1 cut(s) 1450
BspOI GCTAGC 1 cut(s) 930
BspPI GGATC 3 cut(s) 848, 1007, 1305
BspTNI GGTCTC 1 cut(s) 770
BsrDI GCAATG 2 cut(s) 642, 1371
BsrFI RCCGGY 1 cut(s) 511
BsrGI TGTACA 1 cut(s) 688
BsrI ACTGG 1 cut(s) 105
BssAI RCCGGY 1 cut(s) 511
BssECI CCNNGG 1 cut(s) 1004
BssMI GATC 7 cut(s) 62, 664, 853, 1012, 1228, 1297, 1321
BssNI GRCGYC 1 cut(s) 566
BssT1I CCWWGG 1 cut(s) 1004
Bst4CI ACNGT 3 cut(s) 396, 788, 838
Bst6I CTCTTC 1 cut(s) 1092
BstACI GRCGYC 1 cut(s) 566
BstAUI TGTACA 1 cut(s) 688
BstC8I GCNNGC 5 cut(s) 273, 928, 932, 1237, 1561
BstDSI CCRYGG 1 cut(s) 1004
BstENI CCTNNNNNAGG 1 cut(s) 749
BstF5I GGATG 5 cut(s) 109, 124, 232, 508, 691
BstFNI CGCG 1 cut(s) 1506
BstH2I RGCGCY 1 cut(s) 745
BstHHI GCGC 1 cut(s) 744
BstKTI GATC 7 cut(s) 65, 667, 856, 1015, 1231, 1300, 1324
BstMAI GTCTC 3 cut(s) 520, 770, 1460
BstMBI GATC 7 cut(s) 62, 664, 853, 1012, 1228, 1297, 1321
BstMCI CGRYCG 1 cut(s) 512
BstMWI GCNNNNNNNGC 1 cut(s) 1544
BstNSI RCATGY 2 cut(s) 391, 1295
BstSCI CCNGG 1 cut(s) 344
BstSFI CTRYAG 1 cut(s) 392
BstSLI GKGCMC 2 cut(s) 346, 1004
BstUI CGCG 1 cut(s) 1506
BstV1I GCAGC 6 cut(s) 167, 266, 659, 921, 1396, 1480
BstV2I GAAGAC 3 cut(s) 1154, 1175, 1196
BstX2I RGATCY 1 cut(s) 1321
BstXI CCANNNNNNTGG 1 cut(s) 682
BstYI RGATCY 1 cut(s) 1321
BsuRI GGCC 3 cut(s) 344, 1002, 1394
BtgI CCRYGG 1 cut(s) 1004
BtsCI GGATG 5 cut(s) 109, 124, 232, 508, 691
BtsI GCAGTG 1 cut(s) 864
BtsIMutI CAGTG 4 cut(s) 401, 834, 864, 1432
BveI ACCTGC 1 cut(s) 1450
Cac8I GCNNGC 5 cut(s) 273, 928, 932, 1237, 1561
CfoI GCGC 1 cut(s) 744
Cfr10I RCCGGY 1 cut(s) 511
Cfr13I GGNCC 5 cut(s) 342, 343, 612, 1000, 1001
CseI GACGC 1 cut(s) 1495
Csp6I GTAC 4 cut(s) 589, 689, 954, 960
CspAI ACCGGT 1 cut(s) 511
CviAII CATG 8 cut(s) 14, 163, 308, 388, 488, 520, 1005, 1292
CviQI GTAC 4 cut(s) 589, 689, 954, 960
DpnI GATC 7 cut(s) 64, 666, 855, 1014, 1230, 1299, 1323
DpnII GATC 7 cut(s) 62, 664, 853, 1012, 1228, 1297, 1321
DriI GACNNNNNGTC 1 cut(s) 512
Eam1104I CTCTTC 1 cut(s) 1092
Eam1105I GACNNNNNGTC 1 cut(s) 512
EarI CTCTTC 1 cut(s) 1092
Eco130I CCWWGG 1 cut(s) 1004
Eco24I GRGCYC 2 cut(s) 346, 1004
Eco31I GGTCTC 1 cut(s) 770
Eco32I GATATC 1 cut(s) 990
Eco47I GGWCC 1 cut(s) 612
Eco57I CTGAAG 4 cut(s) 731, 1242, 1338, 1508
EcoNI CCTNNNNNAGG 1 cut(s) 749
EcoO109I RGGNCCY 3 cut(s) 342, 612, 1000
EcoRV GATATC 1 cut(s) 990
EcoT14I CCWWGG 1 cut(s) 1004
EcoT22I ATGCAT 1 cut(s) 1293
EcoT38I GRGCYC 2 cut(s) 346, 1004
ErhI CCWWGG 1 cut(s) 1004
FaeI CATG 8 cut(s) 17, 166, 311, 391, 491, 523, 1008, 1295
FatI CATG 8 cut(s) 13, 162, 307, 387, 487, 519, 1004, 1291
FauI CCCGC 1 cut(s) 1568
FauNDI CATATG 1 cut(s) 321
FbaI TGATCA 1 cut(s) 664
FblI GTMKAC 1 cut(s) 516
Fnu4HI GCNGC 6 cut(s) 156, 255, 648, 935, 1410, 1494
FokI GGATG 5 cut(s) 116, 131, 239, 515, 698
FriOI GRGCYC 2 cut(s) 346, 1004
Fsp4HI GCNGC 6 cut(s) 156, 255, 648, 935, 1410, 1494
FspBI CTAG 2 cut(s) 927, 1583
GlaI GCGC 1 cut(s) 743
GluI GCNGC 6 cut(s) 156, 255, 648, 935, 1410, 1494
HaeII RGCGCY 1 cut(s) 745
HaeIII GGCC 3 cut(s) 344, 1002, 1394
HapII CCGG 5 cut(s) 268, 346, 512, 1163, 1184
HgaI GACGC 1 cut(s) 1495
HhaI GCGC 1 cut(s) 744
Hin1I GRCGYC 1 cut(s) 566
Hin1II CATG 8 cut(s) 17, 166, 311, 391, 491, 523, 1008, 1295
Hin6I GCGC 1 cut(s) 742
HinP1I GCGC 1 cut(s) 742
HincII GTYRAC 2 cut(s) 1372, 1594
HindII GTYRAC 2 cut(s) 1372, 1594
HindIII AAGCTT 2 cut(s) 134, 709
HinfI GANTC 4 cut(s) 542, 1253, 1422, 1468
HpaII CCGG 5 cut(s) 268, 346, 512, 1163, 1184
HphI GGTGA 2 cut(s) 773, 1091
Hpy166II GTNNAC 3 cut(s) 517, 1372, 1594
Hpy188III TCNNGA 8 cut(s) 260, 463, 683, 773, 813, 1016, 1046, 1499
Hpy8I GTNNAC 3 cut(s) 517, 1372, 1594
HpyAV CCTTC 6 cut(s) 145, 186, 187, 745, 755, 1483
HpyCH4III ACNGT 3 cut(s) 396, 788, 838
HpyCH4IV ACGT 3 cut(s) 566, 577, 879
HpyCH4V TGCA 7 cut(s) 239, 559, 647, 725, 869, 1239, 1291
HpyF10VI GCNNNNNNNGC 1 cut(s) 1544
HpySE526I ACGT 3 cut(s) 566, 577, 879
Hsp92I GRCGYC 1 cut(s) 566
Hsp92II CATG 8 cut(s) 17, 166, 311, 391, 491, 523, 1008, 1295
HspAI GCGC 1 cut(s) 742
Ksp22I TGATCA 1 cut(s) 664
Kzo9I GATC 7 cut(s) 62, 664, 853, 1012, 1228, 1297, 1321
LmnI GCTCC 2 cut(s) 244, 1576
Lsp1109I GCAGC 6 cut(s) 167, 266, 659, 921, 1396, 1480
LweI GCATC 4 cut(s) 226, 315, 493, 546
MaeI CTAG 2 cut(s) 927, 1583
MaeII ACGT 3 cut(s) 566, 577, 879
MaeIII GTNAC 2 cut(s) 562, 761
MalI GATC 7 cut(s) 64, 666, 855, 1014, 1230, 1299, 1323
MboI GATC 7 cut(s) 62, 664, 853, 1012, 1228, 1297, 1321
MflI RGATCY 1 cut(s) 1321
MhlI GDGCHC 3 cut(s) 346, 674, 1004
MluCI AATT 8 cut(s) 69, 350, 407, 626, 678, 766, 873, 918
MlyI GAGTC 2 cut(s) 1416, 1462
Mph1103I ATGCAT 1 cut(s) 1293
MroXI GAANNNNTTC 1 cut(s) 1252
MseI TTAA 5 cut(s) 81, 147, 713, 876, 1328
MslI CAYNNNNRTG 1 cut(s) 425
MspI CCGG 5 cut(s) 268, 346, 512, 1163, 1184
MspR9I CCNGG 1 cut(s) 346
MvnI CGCG 1 cut(s) 1506
MwoI GCNNNNNNNGC 1 cut(s) 1544
NciI CCSGG 1 cut(s) 346
NcoI CCATGG 1 cut(s) 1004
NdeI CATATG 1 cut(s) 321
NdeII GATC 7 cut(s) 62, 664, 853, 1012, 1228, 1297, 1321
NheI GCTAGC 1 cut(s) 926
NlaIII CATG 8 cut(s) 17, 166, 311, 391, 491, 523, 1008, 1295
NlaIV GGNNCC 2 cut(s) 344, 1002
NmuCI GTSAC 2 cut(s) 562, 761
NsiI ATGCAT 1 cut(s) 1293
NspI RCATGY 2 cut(s) 391, 1295
PdmI GAANNNNTTC 1 cut(s) 1252
PfeI GAWTC 2 cut(s) 542, 1253
PflFI GACNNNGTC 2 cut(s) 531, 1505
PinAI ACCGGT 1 cut(s) 511
PkrI GCNGC 6 cut(s) 157, 256, 649, 936, 1411, 1495
PleI GAGTC 2 cut(s) 1416, 1462
PpsI GAGTC 2 cut(s) 1416, 1462
PpuMI RGGWCCY 1 cut(s) 612
Psp1406I AACGTT 2 cut(s) 577, 879
Psp5II RGGWCCY 1 cut(s) 612
PspN4I GGNNCC 2 cut(s) 344, 1002
PspOMI GGGCCC 2 cut(s) 342, 1000
PspPI GGNCC 5 cut(s) 342, 343, 612, 1000, 1001
PspPPI RGGWCCY 1 cut(s) 612
PsuI RGATCY 1 cut(s) 1321
PsyI GACNNNGTC 2 cut(s) 531, 1505
RsaI GTAC 4 cut(s) 590, 690, 955, 961
RsaNI GTAC 4 cut(s) 589, 689, 954, 960
RseI CAYNNNNRTG 1 cut(s) 425
SaqAI TTAA 5 cut(s) 81, 147, 713, 876, 1328
SatI GCNGC 6 cut(s) 156, 255, 648, 935, 1410, 1494
Sau3AI GATC 7 cut(s) 62, 664, 853, 1012, 1228, 1297, 1321
Sau96I GGNCC 5 cut(s) 342, 343, 612, 1000, 1001
SchI GAGTC 2 cut(s) 1416, 1462
ScrFI CCNGG 1 cut(s) 346
SduI GDGCHC 3 cut(s) 346, 674, 1004
SfaNI GCATC 4 cut(s) 226, 315, 493, 546
SfcI CTRYAG 1 cut(s) 392
SinI GGWCC 1 cut(s) 612
SmiMI CAYNNNNRTG 1 cut(s) 425
SmlI CTYRAG 2 cut(s) 359, 1550
SmoI CTYRAG 2 cut(s) 359, 1550
Sse9I AATT 8 cut(s) 69, 350, 407, 626, 678, 766, 873, 918
SsiI CCGC 2 cut(s) 1504, 1561
SspMI CTAG 2 cut(s) 927, 1583
StyD4I CCNGG 1 cut(s) 344
StyI CCWWGG 1 cut(s) 1004
TaaI ACNGT 3 cut(s) 396, 788, 838
TaiI ACGT 3 cut(s) 569, 580, 882
TaqI TCGA 1 cut(s) 190
TasI AATT 8 cut(s) 69, 350, 407, 626, 678, 766, 873, 918
TatI WGTACW 2 cut(s) 688, 959
TfiI GAWTC 2 cut(s) 542, 1253
Tru1I TTAA 5 cut(s) 81, 147, 713, 876, 1328
Tru9I TTAA 5 cut(s) 81, 147, 713, 876, 1328
TscAI CASTG 4 cut(s) 401, 841, 871, 1432
TseFI GTSAC 2 cut(s) 562, 761
TseI GCWGC 6 cut(s) 155, 254, 647, 934, 1409, 1493
Tsp45I GTSAC 2 cut(s) 562, 761
TspDTI ATGAA 4 cut(s) 120, 471, 784, 1040
TspRI CASTG 4 cut(s) 401, 841, 871, 1432
Tth111I GACNNNGTC 2 cut(s) 531, 1505
VpaK11BI GGWCC 1 cut(s) 612
XagI CCTNNNNNAGG 1 cut(s) 749
XapI RAATTY 3 cut(s) 350, 407, 626
XceI RCATGY 2 cut(s) 391, 1295
XmiI GTMKAC 1 cut(s) 516
XmnI GAANNNNTTC 1 cut(s) 1252
XspI CTAG 2 cut(s) 927, 1583
ZraI GACGTC 1 cut(s) 567
Zsp2I ATGCAT 1 cut(s) 1293
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.