Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000175

Orthogroup ID

OG0001414

Physical Location & Seq

Genomic Coordinates Forward (+)

1265759 .. 1270807

Gene Structure 5049 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_175G00432510.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGTCTGCACCTAATGCTGATGGACGTCCTGCTGAAAACTCTGAGGATGAGAAGAAAACAAAGCTTGGGTCTTTTAAGAAGGCAATTTCGAATTCCTTCAATAAGGGCCGCAGGAACAGTAAGGTAATGTCTTTCCCTATGGATGACATTGATGCAGAGGAGTTAAAGTCAGCCGAAGAATTTCGGCAAGCACTTATTGCGGAAGAACTGTTGCCTTCAAAACATGATGATACTCATATGCTGCTAAGATTTTTAAGGGCCAGGAAGTTTGACCCTGAGAAAACAAAGCAAATGTGGTCTGATATGCTCCACTGGAGGAAGGAATTTGGTGCTGACACTATTATGGAGGACTTCGAATTCAAGGAAATTGATGAAGTCTTGAAATATTATCCACAAGGGCATCATGGAGTTGATAAGGATGGACGCCCTGTCTATATTGAGAAACTTGGTCAAGTAGATTCCAACAAGCTGTTGCAAGTGACAACAATGGACAGATATGTGAAGTACCATGTACGAGAGTTTGAGAGGACGTTTGTGCATAAATTCCCTGCCTGTTCCATTGCGGCAAAGAAGCACATTGATCAGAGCACTACCATTTTGGATGTACAAGGAGTGGGGCTGACAAGTTTGAACAAATCTGCAAGGGAACTCATCCAACGCCTTCAGAAAGTTGACGGTGACAATTATCCTGAGACCCTGAACCGTATGTTCATCATCAATGCTGGTTCTGGATTTAGGCTCTTATGGAACACTGTCAAATCTTTCCTTGACCCCAAGACCACTGCAAAAATCAATGTACTGGGAAACCAATACCAAAGCAAGTTGCTTGAAATAATTGAAGCTAGCAAGTCCTCATCATGTAACAGCGAGCTGCCAGAGTTTTTGGGAGGTACTTGTACTTGTTCTGATAAGGGTGGCTGTATGCTTTCTGATAAGGGCCCATGGAATGATCTAGAAATAATGAAGATGGTTCAGAATTATGGCGAGGACCGTGAGGTTGACGCCAAATCCTCTAGCACAACTATATCCGGCAATGTGGATTCAAGCAATAAGGAGTTGGGCAAAAAGGAGTCAGGCAAAAAGGAGTCGGGCAAAAATGAATCGGGTAAAAATGAGTCGGGCAAACATGAGTCGGACAAGAAGGAGTCGGACAAGAAGGAGTCAGACAAGAAGGAGTTGGACAAGAAGGAGGAGAAGAAGGTCGCTGAAGAAGAAAAAATCTCTGAAGATATGAAGGGTCCCCCAAATCGATCTGATTCAGTCTGCTCAGAGGCTTTTTTGGAGGCTAATGACATGCATATGGATCATCTCTCTCCTGTGCCTGAAGAACTGTCAACTCCCATGGGAGGTGAAAAAGAGGAAAAGCTTAGAGCTGCTCTTACTGCCTTGGAACAACAACTGTCTACAACCAAGCAGGCTGAGGTTGAGAAAGAGCAAAAGCTGAAGGCTGCTCTTGATCGCGTTAATGCCTTGGAACAAGAGCTAACAGAAACCAAGAAGGCACTTGATGAAGCCCGTGTTAAACAAGAGGAGCTTCTAGCCTCTGTTGGGAAGGAAAAGAAGTTTATGAATGGGCGAGATGCGTGCAAAACTGATGCAAGGGCAAGTAATTTTCAACAGAAACTATGGAACTATGAGCTACTTCAGAAGTTCAGGTACATACAATTTGCAAAAGATTTTGAGGATTTGGATCTCAGTCATAGGGTGATTCACATGCTGAATGCCGATGAGGACTCTATGGCTGCAGGAGGGGATTTAGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0003006 GO:0003674 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005622 GO:0005623 GO:0005628 GO:0005634 GO:0006629 GO:0006644 GO:0006650 GO:0006656 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0008525 GO:0008526 GO:0008610 GO:0008654 GO:0009058 GO:0009653 GO:0009791 GO:0009908 GO:0009987 GO:0010876 GO:0010927 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016192 GO:0019637 GO:0019953 GO:0022402 GO:0022413 GO:0022414 GO:0022607 GO:0030154 GO:0030427 GO:0030435 GO:0030437 GO:0031321 GO:0031322 GO:0032153 GO:0032501 GO:0032502 GO:0032505 GO:0032989 GO:0033036 GO:0034293 GO:0035838 GO:0042763 GO:0042764 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043934 GO:0043935 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044464 GO:0044703 GO:0045017 GO:0046470 GO:0046474 GO:0046486 GO:0048193 GO:0048367 GO:0048468 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0051286 GO:0051321 GO:0051704 GO:0060187 GO:0061024 GO:0061458 GO:0071702 GO:0071704 GO:0071840 GO:0090407 GO:0090567 GO:0097164 GO:0120009 GO:0120010 GO:1901564 GO:1901566 GO:1901576 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRAL_TRIO CRAL_TRIO_N

Protein Analysis

587

Amino Acids

66.53

Weight (kDa)

5.63

Isoelectric Point (pI)

44.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRAL_TRIO_N	PF03765	60 - 100	1.4e-07	CRAL/TRIO, N-terminal domain
CRAL_TRIO	PF00650	128 - 283	2.8e-26	CRAL/TRIO domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001414)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16380 AT2G16380 AT2G16380 AT2G21540 AT2G21540 AT2G21540 AT2G21540 AT2G21540 AT2G21540 AT4G34580 AT4G34580 AT4G39180 AT4G39180 AT4G39180
fragaria_vesca	FvH4_2g09420 FvH4_2g09420 FvH4_2g09420 FvH4_2g09490 FvH4_2g09490
malus_domestica	MD05G1062700.v1.1 MD05G1062800.v1.1 MD05G1062900.v1.1 MD10G1070400.v1.1 MD10G1070500.v1.1
prunus_persica	Prupe.8G092000_v2.0.a1 Prupe.8G092100_v2.0.a1 Prupe.8G092200_v2.0.a1
pyrus_communis	pycom05g05440 pycom10g05620 pycom10g05630
rosa_chinensis	RchiOBHm_Chr6g0265701 RchiOBHm_Chr6g0265771
rosa_laevigata	RLG00000014161 RLG00000014165
rosa_multiflora	Rmu_co8114364.1_g000001 Rmu_sc0000208.1_g000028 Rmu_sc0008535.1_g000015
rosa_roxburghii	Rroxscaffold_175G00432510 Rroxscaffold_175G00432560 Rroxscaffold_7G00202430
rosa_rugosa	Rorug06G0018500 Rorug06G0019000
rosa_samantha	Rh6AG140700 Rh6AG141500 Rh6BG141100 Rh6BG141400 Rh6CG137700 Rh6CG138000 Rh6DG124600 Rh6DG125000
rosa_wichuraiana	Rw6G012170 Rw6G012230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	28
AccI	GTMKAC	1 cut(s)	1403
AccII	CGCG	1 cut(s)	1461
AciI	CCGC	3 cut(s)	109, 200, 563
AclWI	GGATC	2 cut(s)	1311, 1698
AcsI	RAATTY	5 cut(s)	91, 179, 323, 356, 542
AcuI	CTGAAG	6 cut(s)	647, 1227, 1245, 1344, 1463, 1628
AcyI	GRCGYC	3 cut(s)	25, 424, 1002
AfaI	GTAC	7 cut(s)	506, 513, 606, 798, 892, 898, 1658
AfiI	CCNNNNNNNGG	2 cut(s)	1346, 1548
AgsI	TTSAA	9 cut(s)	100, 219, 361, 382, 631, 830, 839, 1044, 1616
AhdI	GACNNNNNGTC	1 cut(s)	428
AjnI	CCWGG	1 cut(s)	260
Alw21I	GWGCWC	1 cut(s)	590
Alw26I	GTCTC	1 cut(s)	686
AlwI	GGATC	2 cut(s)	1311, 1698
AoxI	GGCC	3 cut(s)	106, 258, 937
ApaI	GGGCCC	1 cut(s)	941
ApeKI	GCWGC	5 cut(s)	241, 871, 1373, 1448, 1742
ApoI	RAATTY	5 cut(s)	91, 179, 323, 356, 542
ArsI	GACNNNNNNTTYG	2 cut(s)	53, 85
Asp700I	GAANNNNTTC	2 cut(s)	95, 180
AspS9I	GGNCC	6 cut(s)	106, 258, 937, 938, 988, 1238
AsuHPI	GGTGA	3 cut(s)	689, 1361, 1717
AsuII	TTCGAA	2 cut(s)	89, 354
AsuNHI	GCTAGC	1 cut(s)	842
AvaII	GGWCC	2 cut(s)	988, 1238
BaeGI	GKGCMC	1 cut(s)	941
BanII	GRGCYC	1 cut(s)	941
BarI	GAAGNNNNNNTAC	2 cut(s)	1640, 1672
Bbv12I	GWGCWC	1 cut(s)	590
BbvCI	CCTCAGC	1 cut(s)	1419
BbvI	GCAGC	5 cut(s)	228, 858, 1360, 1435, 1729
BccI	CCATC	3 cut(s)	14, 413, 961
BcgI	CGANNNNNNTGC	2 cut(s)	1566, 1600
BciT130I	CCWGG	1 cut(s)	262
BclI	TGATCA	1 cut(s)	580
BcoDI	GTCTC	1 cut(s)	686
BfaI	CTAG	4 cut(s)	843, 953, 1014, 1538
BfmI	CTRYAG	1 cut(s)	1743
BisI	GCNGC	7 cut(s)	109, 242, 564, 872, 1374, 1449, 1743
BlsI	GCNGC	7 cut(s)	110, 243, 565, 873, 1375, 1450, 1744
Bme1390I	CCNGG	1 cut(s)	262
Bme18I	GGWCC	2 cut(s)	988, 1238
BmeRI	GACNNNNNGTC	1 cut(s)	428
BmgT120I	GGNCC	6 cut(s)	106, 258, 937, 938, 988, 1238
BmiI	GGNNCC	3 cut(s)	939, 1239, 1240
BmrFI	CCNGG	1 cut(s)	262
BmrI	ACTGGG	1 cut(s)	809
BmsI	GCATC	4 cut(s)	142, 409, 1570, 1585
BmtI	GCTAGC	1 cut(s)	846
BmuI	ACTGGG	1 cut(s)	809
BpmI	CTGGAG	1 cut(s)	334
Bpu10I	CCTNAGC	1 cut(s)	1419
Bpu14I	TTCGAA	2 cut(s)	89, 354
Bsa29I	ATCGAT	1 cut(s)	1249
BsaBI	GATNNNNATC	1 cut(s)	1689
BsaHI	GRCGYC	3 cut(s)	25, 424, 1002
BsaI	GGTCTC	1 cut(s)	686
BsaJI	CCNNGG	4 cut(s)	941, 1341, 1386, 1470
BsaXI	ACNNNNNCTCC	2 cut(s)	152, 182
Bsc4I	CCNNNNNNNGG	2 cut(s)	1346, 1548
Bse1I	ACTGG	2 cut(s)	317, 804
Bse3DI	GCAATG	2 cut(s)	558, 1039
Bse8I	GATNNNNATC	1 cut(s)	1689
BseBI	CCWGG	1 cut(s)	262
BseCI	ATCGAT	1 cut(s)	1249
BseDI	CCNNGG	4 cut(s)	941, 1341, 1386, 1470
BseGI	GGATG	5 cut(s)	52, 148, 424, 607, 651
BseJI	GATNNNNATC	1 cut(s)	1689
BseLI	CCNNNNNNNGG	2 cut(s)	1346, 1548
BseMI	GCAATG	2 cut(s)	558, 1039
BseMII	CTCAG	6 cut(s)	33, 267, 681, 1281, 1410, 1708
BseNI	ACTGG	2 cut(s)	317, 804
BseRI	GAGGAG	3 cut(s)	173, 1205, 1544
BseSI	GKGCMC	1 cut(s)	941
BseXI	GCAGC	5 cut(s)	228, 858, 1360, 1435, 1729
Bsh1236I	CGCG	1 cut(s)	1461
BshFI	GGCC	3 cut(s)	108, 260, 939
BshVI	ATCGAT	1 cut(s)	1249
BsiHKAI	GWGCWC	1 cut(s)	590
BsiSI	CCGG	1 cut(s)	1029
BslFI	GGGAC	1 cut(s)	1224
BslI	CCNNNNNNNGG	2 cut(s)	1346, 1548
BsmAI	GTCTC	1 cut(s)	686
BsmFI	GGGAC	1 cut(s)	1224
BsmI	GAATGC	1 cut(s)	1726
BsnI	GGCC	3 cut(s)	108, 260, 939
Bso31I	GGTCTC	1 cut(s)	686
Bsp119I	TTCGAA	2 cut(s)	89, 354
Bsp120I	GGGCCC	1 cut(s)	937
Bsp1286I	GDGCHC	2 cut(s)	590, 941
Bsp1407I	TGTACA	1 cut(s)	604
Bsp143I	GATC	6 cut(s)	580, 949, 1250, 1303, 1456, 1690
Bsp19I	CCATGG	2 cut(s)	941, 1341
BspACI	CCGC	3 cut(s)	109, 200, 563
BspANI	GGCC	3 cut(s)	108, 260, 939
BspCNI	CTCAG	6 cut(s)	34, 268, 682, 1280, 1411, 1707
BspDI	ATCGAT	1 cut(s)	1249
BspFNI	CGCG	1 cut(s)	1461
BspLI	GGNNCC	3 cut(s)	939, 1239, 1240
BspMAI	CTGCAG	1 cut(s)	1747
BspOI	GCTAGC	1 cut(s)	846
BspPI	GGATC	2 cut(s)	1311, 1698
BspT104I	TTCGAA	2 cut(s)	89, 354
BspTNI	GGTCTC	1 cut(s)	686
BsrDI	GCAATG	2 cut(s)	558, 1039
BsrGI	TGTACA	1 cut(s)	604
BsrI	ACTGG	2 cut(s)	317, 804
BssECI	CCNNGG	4 cut(s)	941, 1341, 1386, 1470
BssMI	GATC	6 cut(s)	580, 949, 1250, 1303, 1456, 1690
BssNI	GRCGYC	3 cut(s)	25, 424, 1002
BssT1I	CCWWGG	4 cut(s)	941, 1341, 1386, 1470
Bst2UI	CCWGG	1 cut(s)	262
Bst4CI	ACNGT	8 cut(s)	119, 210, 677, 704, 754, 992, 1332, 1401
BstACI	GRCGYC	3 cut(s)	25, 424, 1002
BstAPI	GCANNNNNTGC	2 cut(s)	14, 197
BstAUI	TGTACA	1 cut(s)	604
BstBI	TTCGAA	2 cut(s)	89, 354
BstC8I	GCNNGC	5 cut(s)	189, 844, 869, 1416, 1585
BstDEI	CTNAG	8 cut(s)	42, 245, 276, 690, 1267, 1367, 1419, 1694
BstDSI	CCRYGG	2 cut(s)	941, 1341
BstF5I	GGATG	5 cut(s)	52, 148, 424, 607, 651
BstFNI	CGCG	1 cut(s)	1461
BstKTI	GATC	6 cut(s)	583, 952, 1253, 1306, 1459, 1693
BstMAI	GTCTC	1 cut(s)	686
BstMBI	GATC	6 cut(s)	580, 949, 1250, 1303, 1456, 1690
BstMWI	GCNNNNNNNGC	3 cut(s)	14, 197, 1382
BstNI	CCWGG	1 cut(s)	262
BstNSI	RCATGY	2 cut(s)	1297, 1717
BstSCI	CCNGG	1 cut(s)	260
BstSFI	CTRYAG	1 cut(s)	1743
BstSLI	GKGCMC	1 cut(s)	941
BstUI	CGCG	1 cut(s)	1461
BstV1I	GCAGC	5 cut(s)	228, 858, 1360, 1435, 1729
BstX2I	RGATCY	1 cut(s)	1690
BstYI	RGATCY	1 cut(s)	1690
Bsu15I	ATCGAT	1 cut(s)	1249
BsuRI	GGCC	3 cut(s)	108, 260, 939
BsuTUI	ATCGAT	1 cut(s)	1249
BtgI	CCRYGG	2 cut(s)	941, 1341
BtsCI	GGATG	5 cut(s)	52, 148, 424, 607, 651
BtsI	GCAGTG	1 cut(s)	780
BtsIMutI	CAGTG	3 cut(s)	310, 750, 780
Cac8I	GCNNGC	5 cut(s)	189, 844, 869, 1416, 1585
Cfr13I	GGNCC	6 cut(s)	106, 258, 937, 938, 988, 1238
ClaI	ATCGAT	1 cut(s)	1249
CseI	GACGC	2 cut(s)	432, 1010
Csp6I	GTAC	7 cut(s)	505, 512, 605, 797, 891, 897, 1657
CviAII	CATG	9 cut(s)	224, 404, 509, 858, 942, 1127, 1294, 1342, 1714
CviQI	GTAC	7 cut(s)	505, 512, 605, 797, 891, 897, 1657
DdeI	CTNAG	8 cut(s)	42, 245, 276, 690, 1267, 1367, 1419, 1694
DpnI	GATC	6 cut(s)	582, 951, 1252, 1305, 1458, 1692
DpnII	GATC	6 cut(s)	580, 949, 1250, 1303, 1456, 1690
DriI	GACNNNNNGTC	1 cut(s)	428
Eam1105I	GACNNNNNGTC	1 cut(s)	428
Eco130I	CCWWGG	4 cut(s)	941, 1341, 1386, 1470
Eco24I	GRGCYC	1 cut(s)	941
Eco31I	GGTCTC	1 cut(s)	686
Eco47I	GGWCC	2 cut(s)	988, 1238
Eco57I	CTGAAG	6 cut(s)	647, 1227, 1245, 1344, 1463, 1628
EcoO109I	RGGNCCY	2 cut(s)	937, 1238
EcoRI	GAATTC	2 cut(s)	91, 356
EcoRII	CCWGG	1 cut(s)	260
EcoT14I	CCWWGG	4 cut(s)	941, 1341, 1386, 1470
EcoT22I	ATGCAT	1 cut(s)	1299
EcoT38I	GRGCYC	1 cut(s)	941
ErhI	CCWWGG	4 cut(s)	941, 1341, 1386, 1470
FaeI	CATG	9 cut(s)	227, 407, 512, 861, 945, 1130, 1297, 1345, 1717
FalI	AAGNNNNNCTT	2 cut(s)	1518, 1550
FaqI	GGGAC	1 cut(s)	1224
FatI	CATG	9 cut(s)	223, 403, 508, 857, 941, 1126, 1293, 1341, 1713
FauNDI	CATATG	2 cut(s)	237, 1299
FbaI	TGATCA	1 cut(s)	580
FblI	GTMKAC	1 cut(s)	1403
Fnu4HI	GCNGC	7 cut(s)	109, 242, 564, 872, 1374, 1449, 1743
FokI	GGATG	5 cut(s)	59, 155, 431, 614, 638
FriOI	GRGCYC	1 cut(s)	941
Fsp4HI	GCNGC	7 cut(s)	109, 242, 564, 872, 1374, 1449, 1743
FspBI	CTAG	4 cut(s)	843, 953, 1014, 1538
GluI	GCNGC	7 cut(s)	109, 242, 564, 872, 1374, 1449, 1743
GsuI	CTGGAG	1 cut(s)	334
HaeIII	GGCC	3 cut(s)	108, 260, 939
HapII	CCGG	1 cut(s)	1029
HgaI	GACGC	2 cut(s)	432, 1010
Hin1I	GRCGYC	3 cut(s)	25, 424, 1002
Hin1II	CATG	9 cut(s)	227, 407, 512, 861, 945, 1130, 1297, 1345, 1717
HincII	GTYRAC	3 cut(s)	673, 1000, 1335
HindII	GTYRAC	3 cut(s)	673, 1000, 1335
HindIII	AAGCTT	2 cut(s)	62, 1364
HpaII	CCGG	1 cut(s)	1029
HphI	GGTGA	3 cut(s)	689, 1361, 1717
Hpy166II	GTNNAC	4 cut(s)	673, 1000, 1335, 1404
Hpy188III	TCNNGA	5 cut(s)	379, 689, 729, 953, 1454
Hpy8I	GTNNAC	4 cut(s)	673, 1000, 1335, 1404
HpyCH4III	ACNGT	8 cut(s)	119, 210, 677, 704, 754, 992, 1332, 1401
HpyCH4IV	ACGT	2 cut(s)	25, 530
HpyF10VI	GCNNNNNNNGC	3 cut(s)	14, 197, 1382
HpyF3I	CTNAG	8 cut(s)	42, 245, 276, 690, 1267, 1367, 1419, 1694
HpySE526I	ACGT	2 cut(s)	25, 530
Hsp92I	GRCGYC	3 cut(s)	25, 424, 1002
Hsp92II	CATG	9 cut(s)	227, 407, 512, 861, 945, 1130, 1297, 1345, 1717
KflI	GGGWCCC	1 cut(s)	1238
Ksp22I	TGATCA	1 cut(s)	580
Kzo9I	GATC	6 cut(s)	580, 949, 1250, 1303, 1456, 1690
LmnI	GCTCC	2 cut(s)	312, 1531
Lsp1109I	GCAGC	5 cut(s)	228, 858, 1360, 1435, 1729
LweI	GCATC	4 cut(s)	142, 409, 1570, 1585
MaeI	CTAG	4 cut(s)	843, 953, 1014, 1538
MaeII	ACGT	2 cut(s)	25, 530
MaeIII	GTNAC	3 cut(s)	478, 677, 860
MalI	GATC	6 cut(s)	582, 951, 1252, 1305, 1458, 1692
MboI	GATC	6 cut(s)	580, 949, 1250, 1303, 1456, 1690
MboII	GAAGA	9 cut(s)	64, 188, 215, 976, 1207, 1220, 1223, 1238, 1337
MflI	RGATCY	1 cut(s)	1690
MhlI	GDGCHC	2 cut(s)	590, 941
MlyI	GAGTC	7 cut(s)	1079, 1094, 1124, 1139, 1154, 1169, 1727
MmeI	TCCRAC	5 cut(s)	486, 679, 1113, 1128, 1158
Mph1103I	ATGCAT	1 cut(s)	1299
MroXI	GAANNNNTTC	2 cut(s)	95, 180
MseI	TTAA	6 cut(s)	75, 164, 254, 1464, 1521, 1762
MslI	CAYNNNNRTG	2 cut(s)	341, 1298
MspI	CCGG	1 cut(s)	1029
MspR9I	CCNGG	1 cut(s)	262
Mva1269I	GAATGC	1 cut(s)	1726
MvaI	CCWGG	1 cut(s)	262
MvnI	CGCG	1 cut(s)	1461
MwoI	GCNNNNNNNGC	3 cut(s)	14, 197, 1382
NcoI	CCATGG	2 cut(s)	941, 1341
NdeI	CATATG	2 cut(s)	237, 1299
NdeII	GATC	6 cut(s)	580, 949, 1250, 1303, 1456, 1690
NheI	GCTAGC	1 cut(s)	842
NlaIII	CATG	9 cut(s)	227, 407, 512, 861, 945, 1130, 1297, 1345, 1717
NlaIV	GGNNCC	3 cut(s)	939, 1239, 1240
NmuCI	GTSAC	2 cut(s)	478, 677
NsiI	ATGCAT	1 cut(s)	1299
NspI	RCATGY	2 cut(s)	1297, 1717
NspV	TTCGAA	2 cut(s)	89, 354
PctI	GAATGC	1 cut(s)	1726
PdmI	GAANNNNTTC	2 cut(s)	95, 180
PfeI	GAWTC	5 cut(s)	458, 1040, 1100, 1256, 1708
PkrI	GCNGC	7 cut(s)	110, 243, 565, 873, 1375, 1450, 1744
PleI	GAGTC	7 cut(s)	1078, 1093, 1123, 1138, 1153, 1168, 1727
PpsI	GAGTC	7 cut(s)	1078, 1093, 1123, 1138, 1153, 1168, 1727
PpuMI	RGGWCCY	1 cut(s)	1238
Psp5II	RGGWCCY	1 cut(s)	1238
Psp6I	CCWGG	1 cut(s)	260
PspGI	CCWGG	1 cut(s)	260
PspN4I	GGNNCC	3 cut(s)	939, 1239, 1240
PspOMI	GGGCCC	1 cut(s)	937
PspPI	GGNCC	6 cut(s)	106, 258, 937, 938, 988, 1238
PspPPI	RGGWCCY	1 cut(s)	1238
PstI	CTGCAG	1 cut(s)	1747
PsuI	RGATCY	1 cut(s)	1690
RsaI	GTAC	7 cut(s)	506, 513, 606, 798, 892, 898, 1658
RsaNI	GTAC	7 cut(s)	505, 512, 605, 797, 891, 897, 1657
RseI	CAYNNNNRTG	2 cut(s)	341, 1298
SaqAI	TTAA	6 cut(s)	75, 164, 254, 1464, 1521, 1762
SatI	GCNGC	7 cut(s)	109, 242, 564, 872, 1374, 1449, 1743
Sau3AI	GATC	6 cut(s)	580, 949, 1250, 1303, 1456, 1690
Sau96I	GGNCC	6 cut(s)	106, 258, 937, 938, 988, 1238
SchI	GAGTC	7 cut(s)	1079, 1094, 1124, 1139, 1154, 1169, 1727
ScrFI	CCNGG	1 cut(s)	262
SduI	GDGCHC	2 cut(s)	590, 941
SfaNI	GCATC	4 cut(s)	142, 409, 1570, 1585
SfcI	CTRYAG	1 cut(s)	1743
SfuI	TTCGAA	2 cut(s)	89, 354
SinI	GGWCC	2 cut(s)	988, 1238
SmiMI	CAYNNNNRTG	2 cut(s)	341, 1298
SsiI	CCGC	3 cut(s)	109, 200, 563
SspI	AATATT	1 cut(s)	386
SspMI	CTAG	4 cut(s)	843, 953, 1014, 1538
StyD4I	CCNGG	1 cut(s)	260
StyI	CCWWGG	4 cut(s)	941, 1341, 1386, 1470
TaaI	ACNGT	8 cut(s)	119, 210, 677, 704, 754, 992, 1332, 1401
TaiI	ACGT	2 cut(s)	28, 533
TaqI	TCGA	3 cut(s)	89, 354, 1249
TatI	WGTACW	3 cut(s)	604, 796, 896
TauI	GCSGC	2 cut(s)	111, 566
TfiI	GAWTC	5 cut(s)	458, 1040, 1100, 1256, 1708
Tru1I	TTAA	6 cut(s)	75, 164, 254, 1464, 1521, 1762
Tru9I	TTAA	6 cut(s)	75, 164, 254, 1464, 1521, 1762
TscAI	CASTG	3 cut(s)	317, 757, 787
TseFI	GTSAC	2 cut(s)	478, 677
TseI	GCWGC	5 cut(s)	241, 871, 1373, 1448, 1742
Tsp45I	GTSAC	2 cut(s)	478, 677
TspDTI	ATGAA	7 cut(s)	387, 700, 977, 1113, 1247, 1524, 1583
TspRI	CASTG	3 cut(s)	317, 757, 787
VpaK11BI	GGWCC	2 cut(s)	988, 1238
XapI	RAATTY	5 cut(s)	91, 179, 323, 356, 542
XbaI	TCTAGA	1 cut(s)	952
XceI	RCATGY	2 cut(s)	1297, 1717
XmiI	GTMKAC	1 cut(s)	1403
XmnI	GAANNNNTTC	2 cut(s)	95, 180
XspI	CTAG	4 cut(s)	843, 953, 1014, 1538
ZraI	GACGTC	1 cut(s)	26
Zsp2I	ATGCAT	1 cut(s)	1299

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.