Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0002752

Physical Location & Seq

Genomic Coordinates Reverse (-)

24586889 .. 24590398

Gene Structure 3510 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1123400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1446 bp

ATGAAGGAGGTCCTGGCGCCTTCCAACTCAGTTTCTTCGACTTCTCCGTCAACTTTACACAATTTGAAGGAGATTGCTTCACTCCTTGAGACTGCTGCTTATACCCGGGAGGTTAGGCGGATTGTGCGTGCCGTTAGGCTAACGATGGTGTTGAGGCGGAAGCTGAAGGTTTCTGTGATTTCAGCATTCCTCAATTTTGCCCTTACACCGGGATCTGAGGTTCATAGCCGTTTATCGTCCTTTCTTCCCAAGGACGATGAACAGGATATGGACGTTGATACCGCAACATCTGCTACTCAAGTTCCCGCAAAACATGCCTTGCCAGAGCTAGAGATGTACTCCTACTTGCTTGTGCTCATTTTTCTGATTGATCAGAAGAAGTACAATGAGGCTAAAGCTTGTGCCTCGGCAAGCATTGCTCGTATTAAGAACTTGAATAGGAGAACCATTGATGTTCTGGCATCCAGGCTGTACTTCTATTACTCCCTTAGCTATGAACTCACTGGTGATCTTGCAGAAATTAGAGGAAATCTCTTGAATCTTCACCGGATTGCAACTTTGCGCCATGATGAGCTGGGTCAGGAAACACTTCTAAACCTTCTGCTACGCAATTATCTCCACTATAACCTGTATGATCAGGCAGAGAAACTGAGGTCCAAGGCACCTCGATTTGAGGCTCACTCCAACCAGCAGTTCTGTCGTTATCTCTTTTACCTAGGAAAGATCAGAACAATTCAGTTGGAGTACACTGATGCAAAGGAGTCCCTCCTGCAAGCTGCTAGGAAAGCCCCTATAGCAGCCCTTGGTTTTCGGATTCAGTGCAACAAGTGGGCAATCATTGTACGCTTGTTGCTTGGAGAAATCCCTGAGAGAACCGTTTTTATGCAAAAAGGCATGGAGAAGGCTTTGAGGCCATACTTCGAACTAACAAATGCTGTGAGAATTGGTGACCTGGATCTTTTCAAAAATATTGCAGAAAAGTTCTCGAATGTATTCAATGCAGACCGAACCCACAATTTGATTGTTAGGCTGCGACATAATGTCATAAGAACTGGGTTGCGTAACATTAGCATCTCTTATTCCCGTATTTCTCTGGTTGATGTTGCTAAAAAGTTGCGATTGGACTCTCCAAACCCGGTTGCTGATGCTGAAAGCATTGTGGCAAAGGCAATCCGAGATGGTGCAATTGATGCCACTCTGGATCATGCAAATGGATGGATGGTGTCTAAGGAAACTGGGGATATCTACTCTACTAACGAGCCCCAAGCTGCATTCGACACAAGAATTGCATTTTGCCTCAATTTGCACAACGATGCAGTGCGAGCACTTAGGTTCCCACCAAATTCCCACAAGGAGAAAGAAAGTGCTGAGAAGAGGAGGGAGAGGCAACAACAGGAGCAAGAGCTTGCAAAGCACATAGCCGAGGAAGATGATGATGAGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko03050 ko05169 map03050 map05169

Pfam Domains

Protein Families

PCI Rpn3_C

Protein Analysis

482

Amino Acids

54.91

Weight (kDa)

9.08

Isoelectric Point (pI)

42.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_PSMD3_N	PF25573	17 - 310	3.1e-108	PSMD3-like, N-terminal TPR repeats
PCI	PF01399	327 - 410	7.9e-19	PCI domain
Rpn3_C	PF08375	414 - 479	4e-27	Proteasome regulatory subunit C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002752)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20200 AT1G75990
fragaria_vesca	FvH4_2g15510 FvH4_2g15510
malus_domestica	MD05G1123400.v1.1 MD08G1008900.v1.1 MD10G1126400.v1.1
prunus_persica	Prupe.1G360600_v2.0.a1 Prupe.1G360600_v2.0.a1 Prupe.8G167300_v2.0.a1
pyrus_communis	pycom05g11770 pycom06g20010 pycom10g10860
rosa_chinensis	RchiOBHm_Chr6g0278511
rosa_laevigata	RLG00000007962 RLG00000013222
rosa_multiflora	Rmu_sc0000258.1_g000009 Rmu_sc0002777.1_g000004
rosa_roxburghii	Rroxscaffold_1G00029920 Rroxscaffold_4G00323800 Rroxscaffold_7G00189830 Rroxscaffold_7G00190320
rosa_rugosa	Rorug06G0117600
rosa_samantha	Rh2AG183600 Rh2AG196400 Rh2BG209000 Rh2DG190000 Rh2DG204200 Rh4AG134600 Rh4AG183800 Rh4DG179200 Rh5AG337600 Rh6AG226700 Rh6BG230900 Rh6CG234000 Rh6DG225300
rosa_wichuraiana	Rw0G003080 Rw4G016480 Rw6G019790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	46
AccB1I	GGYRCC	2 cut(s)	16, 661
AciI	CCGC	4 cut(s)	118, 157, 282, 306
AclWI	GGATC	3 cut(s)	220, 963, 1209
AcsI	RAATTY	1 cut(s)	1342
AcuI	CTGAAG	1 cut(s)	185
AcyI	GRCGYC	1 cut(s)	17
AfaI	GTAC	5 cut(s)	338, 383, 473, 746, 843
AfiI	CCNNNNNNNGG	1 cut(s)	208
AgsI	TTSAA	5 cut(s)	67, 436, 538, 964, 997
AhdI	GACNNNNNGTC	1 cut(s)	1040
AjnI	CCWGG	3 cut(s)	12, 464, 951
AjuI	GAANNNNNNNTTGG	2 cut(s)	677, 709
AloI	GAACNNNNNNTCC	2 cut(s)	204, 236
AluBI	AGCT	8 cut(s)	163, 328, 398, 492, 574, 776, 1268, 1405
AluI	AGCT	8 cut(s)	163, 328, 398, 492, 574, 776, 1268, 1405
Alw21I	GWGCWC	2 cut(s)	357, 1327
Alw26I	GTCTC	1 cut(s)	83
AlwI	GGATC	3 cut(s)	220, 963, 1209
Ama87I	CYCGRG	1 cut(s)	105
AoxI	GGCC	1 cut(s)	911
ApeKI	GCWGC	5 cut(s)	95, 776, 797, 1030, 1268
ApoI	RAATTY	1 cut(s)	1342
Asp700I	GAANNNNTTC	2 cut(s)	588, 992
AspA2I	CCTAGG	1 cut(s)	715
AspLEI	GCGC	2 cut(s)	19, 564
AspS9I	GGNCC	2 cut(s)	10, 654
AsuC2I	CCSGG	4 cut(s)	106, 107, 210, 1136
AsuHPI	GGTGA	3 cut(s)	518, 536, 959
AsuII	TTCGAA	1 cut(s)	921
AvaI	CYCGRG	1 cut(s)	105
AvaII	GGWCC	2 cut(s)	10, 654
AvrII	CCTAGG	1 cut(s)	715
BanI	GGYRCC	2 cut(s)	16, 661
BanII	GRGCYC	1 cut(s)	1263
Bbv12I	GWGCWC	2 cut(s)	357, 1327
BbvI	GCAGC	5 cut(s)	82, 763, 809, 1017, 1255
BccI	CCATC	4 cut(s)	139, 1172, 1209, 1213
BceAI	ACGGC	2 cut(s)	116, 213
BcgI	CGANNNNNNTGC	2 cut(s)	680, 714
BciT130I	CCWGG	3 cut(s)	14, 466, 953
BclI	TGATCA	2 cut(s)	370, 634
BcnI	CCSGG	4 cut(s)	106, 107, 210, 1136
BcoDI	GTCTC	1 cut(s)	83
BfaI	CTAG	3 cut(s)	329, 716, 780
BfmI	CTRYAG	1 cut(s)	792
BfoI	RGCGCY	1 cut(s)	20
BisI	GCNGC	5 cut(s)	96, 777, 798, 1031, 1269
BlnI	CCTAGG	1 cut(s)	715
BlsI	GCNGC	5 cut(s)	97, 778, 799, 1032, 1270
Bme1390I	CCNGG	7 cut(s)	14, 106, 107, 210, 466, 953, 1136
Bme18I	GGWCC	2 cut(s)	10, 654
BmeRI	GACNNNNNGTC	1 cut(s)	1040
BmeT110I	CYCGRG	1 cut(s)	105
BmgT120I	GGNCC	2 cut(s)	10, 654
BmiI	GGNNCC	3 cut(s)	18, 663, 1334
BmrFI	CCNGG	7 cut(s)	14, 106, 107, 210, 466, 953, 1136
BmrI	ACTGGG	2 cut(s)	1062, 1245
BmsI	GCATC	6 cut(s)	470, 742, 1080, 1135, 1180, 1303
BmuI	ACTGGG	2 cut(s)	1062, 1245
BplI	GAGNNNNNCTC	6 cut(s)	323, 355, 516, 548, 665, 697
Bpu10I	CCTNAGC	1 cut(s)	488
Bpu14I	TTCGAA	1 cut(s)	921
BpuEI	CTTGAG	2 cut(s)	107, 282
BpuMI	CCSGG	4 cut(s)	106, 107, 210, 1136
BsaHI	GRCGYC	1 cut(s)	17
BsaJI	CCNNGG	7 cut(s)	105, 249, 405, 657, 715, 802, 1422
BsaWI	WCCGGW	1 cut(s)	546
Bsc4I	CCNNNNNNNGG	1 cut(s)	208
Bse1I	ACTGG	3 cut(s)	508, 1057, 1240
Bse3DI	GCAATG	1 cut(s)	414
BseBI	CCWGG	3 cut(s)	14, 466, 953
BseDI	CCNNGG	7 cut(s)	105, 249, 405, 657, 715, 802, 1422
BseGI	GGATG	3 cut(s)	461, 1220, 1224
BseLI	CCNNNNNNNGG	1 cut(s)	208
BseMI	GCAATG	1 cut(s)	414
BseMII	CTCAG	5 cut(s)	42, 207, 641, 858, 1359
BseNI	ACTGG	3 cut(s)	508, 1057, 1240
BseRI	GAGGAG	1 cut(s)	1390
BseXI	GCAGC	5 cut(s)	82, 763, 809, 1017, 1255
BseYI	CCCAGC	1 cut(s)	574
BshFI	GGCC	1 cut(s)	913
BshNI	GGYRCC	2 cut(s)	16, 661
BsiHKAI	GWGCWC	2 cut(s)	357, 1327
BsiHKCI	CYCGRG	1 cut(s)	105
BsiSI	CCGG	4 cut(s)	106, 209, 547, 1136
BslFI	GGGAC	1 cut(s)	748
BslI	CCNNNNNNNGG	1 cut(s)	208
BsmAI	GTCTC	1 cut(s)	83
BsmFI	GGGAC	1 cut(s)	748
BsmI	GAATGC	2 cut(s)	185, 1271
BsnI	GGCC	1 cut(s)	913
BsoBI	CYCGRG	1 cut(s)	105
Bsp119I	TTCGAA	1 cut(s)	921
Bsp1286I	GDGCHC	3 cut(s)	357, 1263, 1327
Bsp143I	GATC	7 cut(s)	212, 370, 508, 634, 723, 955, 1201
BspACI	CCGC	4 cut(s)	118, 157, 282, 306
BspANI	GGCC	1 cut(s)	913
BspCNI	CTCAG	5 cut(s)	41, 208, 642, 859, 1360
BspLI	GGNNCC	3 cut(s)	18, 663, 1334
BspPI	GGATC	3 cut(s)	220, 963, 1209
BspT104I	TTCGAA	1 cut(s)	921
BspT107I	GGYRCC	2 cut(s)	16, 661
BsrDI	GCAATG	1 cut(s)	414
BsrI	ACTGG	3 cut(s)	508, 1057, 1240
BssECI	CCNNGG	7 cut(s)	105, 249, 405, 657, 715, 802, 1422
BssMI	GATC	7 cut(s)	212, 370, 508, 634, 723, 955, 1201
BssNI	GRCGYC	1 cut(s)	17
BssT1I	CCWWGG	4 cut(s)	249, 657, 715, 802
Bst2UI	CCWGG	3 cut(s)	14, 466, 953
Bst4CI	ACNGT	1 cut(s)	877
Bst6I	CTCTTC	1 cut(s)	1367
BstACI	GRCGYC	1 cut(s)	17
BstAPI	GCANNNNNTGC	4 cut(s)	290, 314, 416, 1190
BstBI	TTCGAA	1 cut(s)	921
BstC8I	GCNNGC	5 cut(s)	129, 412, 774, 1323, 1407
BstDEI	CTNAG	8 cut(s)	28, 216, 488, 650, 867, 1227, 1328, 1368
BstEII	GGTNACC	1 cut(s)	947
BstF5I	GGATG	3 cut(s)	461, 1220, 1224
BstH2I	RGCGCY	1 cut(s)	20
BstHHI	GCGC	2 cut(s)	19, 564
BstKTI	GATC	7 cut(s)	215, 373, 511, 637, 726, 958, 1204
BstMAI	GTCTC	1 cut(s)	83
BstMBI	GATC	7 cut(s)	212, 370, 508, 634, 723, 955, 1201
BstMWI	GCNNNNNNNGC	9 cut(s)	124, 290, 314, 416, 785, 794, 1190, 1322, 1411
BstNI	CCWGG	3 cut(s)	14, 466, 953
BstNSI	RCATGY	1 cut(s)	317
BstPI	GGTNACC	1 cut(s)	947
BstSCI	CCNGG	7 cut(s)	12, 104, 105, 208, 464, 951, 1134
BstSFI	CTRYAG	1 cut(s)	792
BstV1I	GCAGC	5 cut(s)	82, 763, 809, 1017, 1255
BstX2I	RGATCY	2 cut(s)	212, 955
BstYI	RGATCY	2 cut(s)	212, 955
BsuRI	GGCC	1 cut(s)	913
BtsCI	GGATG	3 cut(s)	461, 1220, 1224
BtsI	GCAGTG	1 cut(s)	1323
BtsIMutI	CAGTG	4 cut(s)	501, 747, 824, 1323
Cac8I	GCNNGC	5 cut(s)	129, 412, 774, 1323, 1407
CfoI	GCGC	2 cut(s)	19, 564
Cfr13I	GGNCC	2 cut(s)	10, 654
Cfr9I	CCCGGG	1 cut(s)	105
Csp6I	GTAC	5 cut(s)	337, 382, 472, 745, 842
CviAII	CATG	4 cut(s)	314, 566, 895, 1205
CviQI	GTAC	5 cut(s)	337, 382, 472, 745, 842
DdeI	CTNAG	8 cut(s)	28, 216, 488, 650, 867, 1227, 1328, 1368
DinI	GGCGCC	1 cut(s)	18
DpnI	GATC	7 cut(s)	214, 372, 510, 636, 725, 957, 1203
DpnII	GATC	7 cut(s)	212, 370, 508, 634, 723, 955, 1201
DrdI	GACNNNNNNGTC	1 cut(s)	46
DriI	GACNNNNNGTC	1 cut(s)	1040
DseDI	GACNNNNNNGTC	1 cut(s)	46
Eam1104I	CTCTTC	1 cut(s)	1367
Eam1105I	GACNNNNNGTC	1 cut(s)	1040
EarI	CTCTTC	1 cut(s)	1367
EciI	GGCGGA	2 cut(s)	133, 172
Eco130I	CCWWGG	4 cut(s)	249, 657, 715, 802
Eco24I	GRGCYC	1 cut(s)	1263
Eco32I	GATATC	1 cut(s)	1243
Eco47I	GGWCC	2 cut(s)	10, 654
Eco57I	CTGAAG	1 cut(s)	185
Eco88I	CYCGRG	1 cut(s)	105
Eco91I	GGTNACC	1 cut(s)	947
EcoO109I	RGGNCCY	1 cut(s)	10
EcoO65I	GGTNACC	1 cut(s)	947
EcoRII	CCWGG	3 cut(s)	12, 464, 951
EcoRV	GATATC	1 cut(s)	1243
EcoT14I	CCWWGG	4 cut(s)	249, 657, 715, 802
EcoT38I	GRGCYC	1 cut(s)	1263
EgeI	GGCGCC	1 cut(s)	18
EheI	GGCGCC	1 cut(s)	18
ErhI	CCWWGG	4 cut(s)	249, 657, 715, 802
FaeI	CATG	4 cut(s)	317, 569, 898, 1208
FaqI	GGGAC	1 cut(s)	748
FatI	CATG	4 cut(s)	313, 565, 894, 1204
FauI	CCCGC	1 cut(s)	313
FbaI	TGATCA	2 cut(s)	370, 634
Fnu4HI	GCNGC	5 cut(s)	96, 777, 798, 1031, 1269
FokI	GGATG	3 cut(s)	448, 1227, 1231
FriOI	GRGCYC	1 cut(s)	1263
Fsp4HI	GCNGC	5 cut(s)	96, 777, 798, 1031, 1269
FspBI	CTAG	3 cut(s)	329, 716, 780
GlaI	GCGC	2 cut(s)	18, 563
GluI	GCNGC	5 cut(s)	96, 777, 798, 1031, 1269
GsaI	CCCAGC	1 cut(s)	578
HaeII	RGCGCY	1 cut(s)	20
HaeIII	GGCC	1 cut(s)	913
HapII	CCGG	4 cut(s)	106, 209, 547, 1136
HhaI	GCGC	2 cut(s)	19, 564
Hin1I	GRCGYC	1 cut(s)	17
Hin1II	CATG	4 cut(s)	317, 569, 898, 1208
Hin6I	GCGC	2 cut(s)	17, 562
HinP1I	GCGC	2 cut(s)	17, 562
HincII	GTYRAC	1 cut(s)	51
HindII	GTYRAC	1 cut(s)	51
HindIII	AAGCTT	1 cut(s)	396
HinfI	GANTC	4 cut(s)	538, 761, 814, 1124
HpaII	CCGG	4 cut(s)	106, 209, 547, 1136
HphI	GGTGA	3 cut(s)	518, 536, 959
Hpy166II	GTNNAC	2 cut(s)	51, 747
Hpy188I	TCNGA	6 cut(s)	217, 366, 375, 728, 813, 1175
Hpy188III	TCNNGA	4 cut(s)	535, 581, 985, 1199
Hpy8I	GTNNAC	2 cut(s)	51, 747
HpyAV	CCTTC	5 cut(s)	30, 61, 160, 608, 895
HpyCH4III	ACNGT	1 cut(s)	877
HpyCH4IV	ACGT	1 cut(s)	273
HpyF10VI	GCNNNNNNNGC	9 cut(s)	124, 290, 314, 416, 785, 794, 1190, 1322, 1411
HpyF3I	CTNAG	8 cut(s)	28, 216, 488, 650, 867, 1227, 1328, 1368
HpySE526I	ACGT	1 cut(s)	273
Hsp92I	GRCGYC	1 cut(s)	17
Hsp92II	CATG	4 cut(s)	317, 569, 898, 1208
HspAI	GCGC	2 cut(s)	17, 562
KasI	GGCGCC	1 cut(s)	16
Ksp22I	TGATCA	2 cut(s)	370, 634
Kzo9I	GATC	7 cut(s)	212, 370, 508, 634, 723, 955, 1201
LmnI	GCTCC	1 cut(s)	1396
Lsp1109I	GCAGC	5 cut(s)	82, 763, 809, 1017, 1255
LweI	GCATC	6 cut(s)	470, 742, 1080, 1135, 1180, 1303
MaeI	CTAG	3 cut(s)	329, 716, 780
MaeII	ACGT	1 cut(s)	273
MaeIII	GTNAC	2 cut(s)	947, 1061
MalI	GATC	7 cut(s)	214, 372, 510, 636, 725, 957, 1203
MboI	GATC	7 cut(s)	212, 370, 508, 634, 723, 955, 1201
MboII	GAAGA	6 cut(s)	27, 236, 388, 533, 1384, 1439
MfeI	CAATTG	1 cut(s)	1185
MflI	RGATCY	2 cut(s)	212, 955
MhlI	GDGCHC	3 cut(s)	357, 1263, 1327
Mly113I	GGCGCC	1 cut(s)	17
MlyI	GAGTC	2 cut(s)	770, 1118
MmeI	TCCRAC	3 cut(s)	48, 708, 720
MroXI	GAANNNNTTC	2 cut(s)	588, 992
MseI	TTAA	1 cut(s)	426
MslI	CAYNNNNRTG	2 cut(s)	1209, 1311
MspI	CCGG	4 cut(s)	106, 209, 547, 1136
MspR9I	CCNGG	7 cut(s)	14, 106, 107, 210, 466, 953, 1136
MunI	CAATTG	1 cut(s)	1185
Mva1269I	GAATGC	2 cut(s)	185, 1271
MvaI	CCWGG	3 cut(s)	14, 466, 953
MwoI	GCNNNNNNNGC	9 cut(s)	124, 290, 314, 416, 785, 794, 1190, 1322, 1411
NarI	GGCGCC	1 cut(s)	17
NciI	CCSGG	4 cut(s)	106, 107, 210, 1136
NdeII	GATC	7 cut(s)	212, 370, 508, 634, 723, 955, 1201
NlaIII	CATG	4 cut(s)	317, 569, 898, 1208
NlaIV	GGNNCC	3 cut(s)	18, 663, 1334
NmeAIII	GCCGAG	1 cut(s)	386
NmuCI	GTSAC	1 cut(s)	947
NspI	RCATGY	1 cut(s)	317
NspV	TTCGAA	1 cut(s)	921
PcsI	WCGNNNNNNNCGW	1 cut(s)	44
PctI	GAATGC	2 cut(s)	185, 1271
PdmI	GAANNNNTTC	2 cut(s)	588, 992
PfeI	GAWTC	2 cut(s)	538, 814
PkrI	GCNGC	5 cut(s)	97, 778, 799, 1032, 1270
PleI	GAGTC	2 cut(s)	769, 1118
PluTI	GGCGCC	1 cut(s)	20
PpsI	GAGTC	2 cut(s)	769, 1118
PpuMI	RGGWCCY	1 cut(s)	10
Psp5II	RGGWCCY	1 cut(s)	10
Psp6I	CCWGG	3 cut(s)	12, 464, 951
PspEI	GGTNACC	1 cut(s)	947
PspFI	CCCAGC	1 cut(s)	574
PspGI	CCWGG	3 cut(s)	12, 464, 951
PspN4I	GGNNCC	3 cut(s)	18, 663, 1334
PspPI	GGNCC	2 cut(s)	10, 654
PspPPI	RGGWCCY	1 cut(s)	10
PsuI	RGATCY	2 cut(s)	212, 955
RsaI	GTAC	5 cut(s)	338, 383, 473, 746, 843
RsaNI	GTAC	5 cut(s)	337, 382, 472, 745, 842
RseI	CAYNNNNRTG	2 cut(s)	1209, 1311
SaqAI	TTAA	1 cut(s)	426
SatI	GCNGC	5 cut(s)	96, 777, 798, 1031, 1269
Sau3AI	GATC	7 cut(s)	212, 370, 508, 634, 723, 955, 1201
Sau96I	GGNCC	2 cut(s)	10, 654
SchI	GAGTC	2 cut(s)	770, 1118
ScrFI	CCNGG	7 cut(s)	14, 106, 107, 210, 466, 953, 1136
SduI	GDGCHC	3 cut(s)	357, 1263, 1327
SfaNI	GCATC	6 cut(s)	470, 742, 1080, 1135, 1180, 1303
SfcI	CTRYAG	1 cut(s)	792
SfoI	GGCGCC	1 cut(s)	18
SfuI	TTCGAA	1 cut(s)	921
SinI	GGWCC	2 cut(s)	10, 654
SmaI	CCCGGG	1 cut(s)	107
SmiMI	CAYNNNNRTG	2 cut(s)	1209, 1311
SmlI	CTYRAG	2 cut(s)	86, 297
SmoI	CTYRAG	2 cut(s)	86, 297
SsiI	CCGC	4 cut(s)	118, 157, 282, 306
SspDI	GGCGCC	1 cut(s)	16
SspI	AATATT	1 cut(s)	970
SspMI	CTAG	3 cut(s)	329, 716, 780
StyD4I	CCNGG	7 cut(s)	12, 104, 105, 208, 464, 951, 1134
StyI	CCWWGG	4 cut(s)	249, 657, 715, 802
TaaI	ACNGT	1 cut(s)	877
TaiI	ACGT	1 cut(s)	276
TaqI	TCGA	5 cut(s)	38, 667, 921, 986, 1275
TaqII	GACCGA	1 cut(s)	1020
TatI	WGTACW	4 cut(s)	336, 381, 471, 744
TfiI	GAWTC	2 cut(s)	538, 814
Tru1I	TTAA	1 cut(s)	426
Tru9I	TTAA	1 cut(s)	426
TscAI	CASTG	4 cut(s)	508, 754, 824, 1323
TseFI	GTSAC	1 cut(s)	947
TseI	GCWGC	5 cut(s)	95, 776, 797, 1030, 1268
Tsp45I	GTSAC	1 cut(s)	947
TspDTI	ATGAA	4 cut(s)	17, 212, 273, 510
TspGWI	ACGGA	1 cut(s)	36
TspMI	CCCGGG	1 cut(s)	105
TspRI	CASTG	4 cut(s)	508, 754, 824, 1323
VpaK11BI	GGWCC	2 cut(s)	10, 654
XapI	RAATTY	1 cut(s)	1342
XceI	RCATGY	1 cut(s)	317
XcmI	CCANNNNNNNNNTGG	1 cut(s)	454
XmaI	CCCGGG	1 cut(s)	105
XmaJI	CCTAGG	1 cut(s)	715
XmnI	GAANNNNTTC	2 cut(s)	588, 992
XspI	CTAG	3 cut(s)	329, 716, 780

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.