26S proteasome non-ATPase regulatory subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G20200 AT1G75990 |
| fragaria_vesca | FvH4_2g15510 FvH4_2g15510 |
| malus_domestica | MD05G1123400.v1.1 MD08G1008900.v1.1 MD10G1126400.v1.1 |
| prunus_persica | Prupe.1G360600_v2.0.a1 Prupe.1G360600_v2.0.a1 Prupe.8G167300_v2.0.a1 |
| pyrus_communis | pycom05g11770 pycom06g20010 pycom10g10860 |
| rosa_chinensis | RchiOBHm_Chr6g0278511 |
| rosa_laevigata | RLG00000007962 RLG00000013222 |
| rosa_multiflora | Rmu_sc0000258.1_g000009 Rmu_sc0002777.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00029920 Rroxscaffold_4G00323800 Rroxscaffold_7G00189830 Rroxscaffold_7G00190320 |
| rosa_rugosa | Rorug06G0117600 |
| rosa_samantha | Rh2AG183600 Rh2AG196400 Rh2BG209000 Rh2DG190000 Rh2DG204200 Rh4AG134600 Rh4AG183800 Rh4DG179200 Rh5AG337600 Rh6AG226700 Rh6BG230900 Rh6CG234000 Rh6DG225300 |
| rosa_wichuraiana | Rw0G003080 Rw4G016480 Rw6G019790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 13 |
| AclWI | GGATC | 1 cut(s) | 76 |
| AluBI | AGCT | 1 cut(s) | 19 |
| AluI | AGCT | 1 cut(s) | 19 |
| Alw21I | GWGCWC | 1 cut(s) | 36 |
| AlwI | GGATC | 1 cut(s) | 76 |
| AsuC2I | CCSGG | 2 cut(s) | 66, 85 |
| Bbv12I | GWGCWC | 1 cut(s) | 36 |
| BcnI | CCSGG | 2 cut(s) | 66, 85 |
| Bme1390I | CCNGG | 2 cut(s) | 66, 85 |
| BmrFI | CCNGG | 2 cut(s) | 66, 85 |
| BpuMI | CCSGG | 2 cut(s) | 66, 85 |
| BseGI | GGATG | 1 cut(s) | 133 |
| BseMII | CTCAG | 3 cut(s) | 11, 61, 63 |
| BsiHKAI | GWGCWC | 1 cut(s) | 36 |
| BsiSI | CCGG | 2 cut(s) | 65, 85 |
| BslFI | GGGAC | 1 cut(s) | 145 |
| BsmFI | GGGAC | 1 cut(s) | 145 |
| Bsp1286I | GDGCHC | 1 cut(s) | 36 |
| Bsp143I | GATC | 1 cut(s) | 68 |
| BspACI | CCGC | 1 cut(s) | 13 |
| BspCNI | CTCAG | 3 cut(s) | 12, 60, 64 |
| BspPI | GGATC | 1 cut(s) | 76 |
| BssMI | GATC | 1 cut(s) | 68 |
| Bst6I | CTCTTC | 1 cut(s) | 2 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 146 |
| BstDEI | CTNAG | 3 cut(s) | 20, 47, 72 |
| BstF5I | GGATG | 1 cut(s) | 133 |
| BstKTI | GATC | 1 cut(s) | 71 |
| BstMBI | GATC | 1 cut(s) | 68 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 146 |
| BstSCI | CCNGG | 2 cut(s) | 64, 83 |
| BstX2I | RGATCY | 1 cut(s) | 68 |
| BstYI | RGATCY | 1 cut(s) | 68 |
| BtsCI | GGATG | 1 cut(s) | 133 |
| BtsI | GCAGTG | 1 cut(s) | 135 |
| BtsIMutI | CAGTG | 1 cut(s) | 135 |
| CviAII | CATG | 2 cut(s) | 119, 124 |
| CviJI | RGCY | 2 cut(s) | 19, 77 |
| CviKI_1 | RGCY | 2 cut(s) | 19, 77 |
| DdeI | CTNAG | 3 cut(s) | 20, 47, 72 |
| DpnI | GATC | 1 cut(s) | 70 |
| DpnII | GATC | 1 cut(s) | 68 |
| Eam1104I | CTCTTC | 1 cut(s) | 2 |
| EarI | CTCTTC | 1 cut(s) | 2 |
| EciI | GGCGGA | 1 cut(s) | 28 |
| FaeI | CATG | 2 cut(s) | 122, 127 |
| FaiI | YATR | 2 cut(s) | 120, 125 |
| FaqI | GGGAC | 1 cut(s) | 145 |
| FatI | CATG | 2 cut(s) | 118, 123 |
| FokI | GGATG | 1 cut(s) | 140 |
| HapII | CCGG | 2 cut(s) | 65, 85 |
| Hin1II | CATG | 2 cut(s) | 122, 127 |
| HincII | GTYRAC | 1 cut(s) | 133 |
| HindII | GTYRAC | 1 cut(s) | 133 |
| HpaII | CCGG | 2 cut(s) | 65, 85 |
| Hpy166II | GTNNAC | 1 cut(s) | 133 |
| Hpy188I | TCNGA | 3 cut(s) | 73, 105, 192 |
| Hpy8I | GTNNAC | 1 cut(s) | 133 |
| HpyAV | CCTTC | 1 cut(s) | 100 |
| HpyCH4V | TGCA | 1 cut(s) | 140 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 146 |
| HpyF3I | CTNAG | 3 cut(s) | 20, 47, 72 |
| Hsp92II | CATG | 2 cut(s) | 122, 127 |
| Kzo9I | GATC | 1 cut(s) | 68 |
| LpnPI | CCDG | 2 cut(s) | 78, 98 |
| MalI | GATC | 1 cut(s) | 70 |
| MboI | GATC | 1 cut(s) | 68 |
| MboII | GAAGA | 2 cut(s) | 19, 92 |
| MflI | RGATCY | 1 cut(s) | 68 |
| MhlI | GDGCHC | 1 cut(s) | 36 |
| MnlI | CCTC | 3 cut(s) | 3, 67, 103 |
| MspI | CCGG | 2 cut(s) | 65, 85 |
| MspR9I | CCNGG | 2 cut(s) | 66, 85 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 146 |
| NciI | CCSGG | 2 cut(s) | 66, 85 |
| NdeII | GATC | 1 cut(s) | 68 |
| NlaIII | CATG | 2 cut(s) | 122, 127 |
| NmeAIII | GCCGAG | 1 cut(s) | 17 |
| PsuI | RGATCY | 1 cut(s) | 68 |
| Sau3AI | GATC | 1 cut(s) | 68 |
| ScrFI | CCNGG | 2 cut(s) | 66, 85 |
| SduI | GDGCHC | 1 cut(s) | 36 |
| SetI | ASST | 1 cut(s) | 21 |
| SsiI | CCGC | 1 cut(s) | 13 |
| StyD4I | CCNGG | 2 cut(s) | 64, 83 |
| TaqI | TCGA | 1 cut(s) | 154 |
| TscAI | CASTG | 1 cut(s) | 142 |
| TspRI | CASTG | 1 cut(s) | 142 |