Prupe.8G167300_v2.0.a1

26S proteasome non-ATPase regulatory subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
17297621 .. 17301395
3775 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G167300.1

Sequence Viewer

Length: 1473 bp
ATGACTCAAGACGTGGAGATGAAAGAGGTCACAGCGCCTTCTATTCCTTCAAATTCAGCTTCTTCTACTTCTCCTTCAACTCTTCATAATTTGAAGGAGATTGCTTCACTCCTTGAGACTGCTGCATATAGTCGAGAGGTTCGGCGAATTGTGCGTGCCGTTAGGCTAACCATGGTGTTGAGGCGGAAGCTGAAGGTTTCTGTGCTCTCAGCATTCCTCAATTTTGCCCTTTCGCCGGGATCTGAGGTTCACAGCCGGCTATCCTCATATCTTCCAAAGGACGATGAACATGACATGGACGTTGATACTGCAACATCTGCTACCCAAGTTTCCTCAAAGCATGCCTTGCCAGAGCTAGAGATTTACTCCTATTTGCTTGTGCTCATTTTTCTGATTGATCAGAAAAAATACAATGAGGCTAAAGCTTGTGCCTCGGCAAGCATTGCTCGAATTAAGAACCTTAATAGGAGAACCATCGATGTTCTGGCATCCAGGCTATACTTCTATTACTCCCTTAGCTATGAACTGACTGATGATCTTGCAGAGATTAGAGGAAATCTCCTTAATCTTCACCGGATTGCAACTTTGCGCCATGATGAGCTGGGTCAGGAAACACTTCTCAACCTTCTGCTTCGCAATTACCTCCACTATAACCTGTATGATCAGGCAGAGAAACTGAGGTCCAAGGCTCCTCGATTTGAGGCTCACTCAAACCAGCAGTTCTGCCGGTATCTCTTTTACCTAGGAAAGATCAGAACAATTCAGTTGGAGTACACTGATGCAAAGGAGTCCCTCCTGCAAGCTGCCAGGAAAGCCCCTATAGCAGCCCTTGGTTTTCGAATTCAATGCAACAAGTGGGCAATTATTGTACGCTTATTGCTTGGAGAAATCCCTGAGAGAACTGTGTTTATGCAAAAAGGCATGGAGAAGGCTTTGAGGCCGTACTTTGAGCTAACAAATGCTGTGAGAATTGGTGACTTGGAGCTGTTCAGAAATATTGCCGAGAAGTTCTCAAATATATTCAGTTCAGACCGAACCCACAATTTGATTGTTAGGCTGCGACATAATGTCATAAGAACTGGGTTGCGTAACATTAGTATCTCTTATTCTCGTATTTCTCTGGTTGATGTTGCTAAAAAGTTGAGATTGGACTCTCCAAATCCTGTTGCTGATGCTGAAAGTATTGTTGCCAAGGCAATCCGTGATGGTGCAATTGATGCCACCCTGGATCATACAAATGGATGGATGGTGTCAAAGGAAACTGGGGATATCTACTCTACTAATGAGCCCCAAGCTGCATTTGACACAAGGATTGCGTTTTGCCTCAATTTGCATAATGACGCAGTGCGAGCGCTTCGGTTCCCACCAAACTCTCACAAGGAGAAAGAAAGTGCTGAGAAGAGGAGGGAGAGACAACAACAGGAGCAAGAGCTTGCAAAGCATATAGCTGAGGAGGATGATGACGAGTTTTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

491

Amino Acids

55.98

Weight (kDa)

8.77

Isoelectric Point (pI)

44.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 184
AclWI GGATC 2 cut(s) 247, 1236
AcsI RAATTY 2 cut(s) 52, 840
AcuI CTGAAG 1 cut(s) 212
AfaI GTAC 3 cut(s) 773, 870, 944
AfeI AGCGCT 1 cut(s) 1353
AfiI CCNNNNNNNGG 1 cut(s) 235
AgsI TTSAA 4 cut(s) 51, 78, 94, 845
AhdI GACNNNNNGTC 1 cut(s) 1067
AjiI CACGTC 1 cut(s) 13
AjnI CCWGG 3 cut(s) 491, 806, 1224
AloI GAACNNNNNNTCC 2 cut(s) 231, 263
Alw21I GWGCWC 2 cut(s) 207, 384
Alw26I GTCTC 2 cut(s) 110, 1405
AlwI GGATC 2 cut(s) 247, 1236
Aor51HI AGCGCT 1 cut(s) 1353
AoxI GGCC 1 cut(s) 938
ApeKI GCWGC 5 cut(s) 122, 803, 824, 1057, 1295
ApoI RAATTY 2 cut(s) 52, 840
Asp700I GAANNNNTTC 1 cut(s) 615
AspA2I CCTAGG 1 cut(s) 742
AspLEI GCGC 3 cut(s) 37, 591, 1354
AspS9I GGNCC 1 cut(s) 681
AsuC2I CCSGG 1 cut(s) 237
AsuHPI GGTGA 2 cut(s) 563, 986
AsuII TTCGAA 1 cut(s) 838
AvaII GGWCC 1 cut(s) 681
AvrII CCTAGG 1 cut(s) 742
BaeI ACNNNNGTAYC 2 cut(s) 1081, 1114
BanII GRGCYC 1 cut(s) 1290
Bbv12I GWGCWC 2 cut(s) 207, 384
BbvCI CCTCAGC 1 cut(s) 1449
BbvI GCAGC 5 cut(s) 109, 790, 836, 1044, 1282
BccI CCATC 4 cut(s) 482, 1199, 1236, 1240
BceAI ACGGC 2 cut(s) 143, 925
BcgI CGANNNNNNTGC 2 cut(s) 828, 862
BciT130I CCWGG 3 cut(s) 493, 808, 1226
BclI TGATCA 2 cut(s) 397, 661
BcnI CCSGG 1 cut(s) 237
BcoDI GTCTC 2 cut(s) 110, 1405
BfaI CTAG 2 cut(s) 356, 743
BfmI CTRYAG 1 cut(s) 819
BfoI RGCGCY 2 cut(s) 38, 1355
BisI GCNGC 5 cut(s) 123, 804, 825, 1058, 1296
BlnI CCTAGG 1 cut(s) 742
BlsI GCNGC 5 cut(s) 124, 805, 826, 1059, 1297
Bme1390I CCNGG 4 cut(s) 237, 493, 808, 1226
Bme18I GGWCC 1 cut(s) 681
BmeRI GACNNNNNGTC 1 cut(s) 1067
BmgBI CACGTC 1 cut(s) 13
BmgT120I GGNCC 1 cut(s) 681
BmiI GGNNCC 2 cut(s) 690, 1361
BmrFI CCNGG 4 cut(s) 237, 493, 808, 1226
BmrI ACTGGG 2 cut(s) 1089, 1272
BmsI GCATC 4 cut(s) 497, 769, 1162, 1207
BmuI ACTGGG 2 cut(s) 1089, 1272
BplI GAGNNNNNCTC 8 cut(s) 350, 382, 543, 575, 692, 724, 995, 1027
Bpu10I CCTNAGC 2 cut(s) 515, 1449
Bpu14I TTCGAA 1 cut(s) 838
BpuEI CTTGAG 1 cut(s) 134
BpuMI CCSGG 1 cut(s) 237
Bsa29I ATCGAT 1 cut(s) 477
BsaJI CCNNGG 7 cut(s) 171, 432, 684, 742, 829, 1191, 1224
BsaWI WCCGGW 1 cut(s) 573
Bsc4I CCNNNNNNNGG 1 cut(s) 235
Bse118I RCCGGY 2 cut(s) 255, 726
Bse1I ACTGG 2 cut(s) 1084, 1267
Bse3DI GCAATG 1 cut(s) 441
BseBI CCWGG 3 cut(s) 493, 808, 1226
BseCI ATCGAT 1 cut(s) 477
BseDI CCNNGG 7 cut(s) 171, 432, 684, 742, 829, 1191, 1224
BseGI GGATG 4 cut(s) 488, 1247, 1251, 1462
BseLI CCNNNNNNNGG 1 cut(s) 235
BseMI GCAATG 1 cut(s) 441
BseMII CTCAG 6 cut(s) 222, 234, 668, 885, 1386, 1440
BseNI ACTGG 2 cut(s) 1084, 1267
BseRI GAGGAG 3 cut(s) 681, 1417, 1466
BseXI GCAGC 5 cut(s) 109, 790, 836, 1044, 1282
BseYI CCCAGC 1 cut(s) 601
BshFI GGCC 1 cut(s) 940
BshVI ATCGAT 1 cut(s) 477
BsiHKAI GWGCWC 2 cut(s) 207, 384
BsiSI CCGG 4 cut(s) 236, 256, 574, 727
BslFI GGGAC 1 cut(s) 775
BslI CCNNNNNNNGG 1 cut(s) 235
BsmAI GTCTC 2 cut(s) 110, 1405
BsmFI GGGAC 1 cut(s) 775
BsmI GAATGC 1 cut(s) 212
BsnI GGCC 1 cut(s) 940
Bsp119I TTCGAA 1 cut(s) 838
Bsp1286I GDGCHC 3 cut(s) 207, 384, 1290
Bsp143I GATC 6 cut(s) 239, 397, 535, 661, 750, 1228
Bsp19I CCATGG 1 cut(s) 171
BspACI CCGC 1 cut(s) 184
BspANI GGCC 1 cut(s) 940
BspCNI CTCAG 6 cut(s) 221, 235, 669, 886, 1387, 1441
BspDI ATCGAT 1 cut(s) 477
BspLI GGNNCC 2 cut(s) 690, 1361
BspPI GGATC 2 cut(s) 247, 1236
BspT104I TTCGAA 1 cut(s) 838
BsrDI GCAATG 1 cut(s) 441
BsrFI RCCGGY 2 cut(s) 255, 726
BsrI ACTGG 2 cut(s) 1084, 1267
BssAI RCCGGY 2 cut(s) 255, 726
BssECI CCNNGG 7 cut(s) 171, 432, 684, 742, 829, 1191, 1224
BssMI GATC 6 cut(s) 239, 397, 535, 661, 750, 1228
BssT1I CCWWGG 5 cut(s) 171, 684, 742, 829, 1191
Bst2UI CCWGG 3 cut(s) 493, 808, 1226
Bst4CI ACNGT 1 cut(s) 904
Bst6I CTCTTC 2 cut(s) 87, 1394
BstAPI GCANNNNNTGC 4 cut(s) 317, 346, 443, 1217
BstBI TTCGAA 1 cut(s) 838
BstC8I GCNNGC 7 cut(s) 156, 257, 342, 439, 801, 1350, 1434
BstDEI CTNAG 7 cut(s) 208, 243, 515, 677, 894, 1395, 1449
BstDSI CCRYGG 1 cut(s) 171
BstF5I GGATG 4 cut(s) 488, 1247, 1251, 1462
BstH2I RGCGCY 2 cut(s) 38, 1355
BstHHI GCGC 3 cut(s) 37, 591, 1354
BstKTI GATC 6 cut(s) 242, 400, 538, 664, 753, 1231
BstMAI GTCTC 2 cut(s) 110, 1405
BstMBI GATC 6 cut(s) 239, 397, 535, 661, 750, 1228
BstMWI GCNNNNNNNGC 9 cut(s) 151, 317, 346, 443, 812, 821, 1217, 1349, 1438
BstNI CCWGG 3 cut(s) 493, 808, 1226
BstNSI RCATGY 1 cut(s) 344
BstSCI CCNGG 4 cut(s) 235, 491, 806, 1224
BstSFI CTRYAG 1 cut(s) 819
BstV1I GCAGC 5 cut(s) 109, 790, 836, 1044, 1282
BstX2I RGATCY 1 cut(s) 239
BstYI RGATCY 1 cut(s) 239
Bsu15I ATCGAT 1 cut(s) 477
BsuRI GGCC 1 cut(s) 940
BsuTUI ATCGAT 1 cut(s) 477
BtgI CCRYGG 1 cut(s) 171
BtrI CACGTC 1 cut(s) 13
BtsCI GGATG 4 cut(s) 488, 1247, 1251, 1462
BtsI GCAGTG 1 cut(s) 1350
BtsIMutI CAGTG 2 cut(s) 774, 1350
Cac8I GCNNGC 7 cut(s) 156, 257, 342, 439, 801, 1350, 1434
CfoI GCGC 3 cut(s) 37, 591, 1354
Cfr10I RCCGGY 2 cut(s) 255, 726
Cfr13I GGNCC 1 cut(s) 681
ClaI ATCGAT 1 cut(s) 477
CseI GACGC 1 cut(s) 1349
Csp6I GTAC 3 cut(s) 772, 869, 943
CviAII CATG 6 cut(s) 172, 290, 295, 341, 593, 922
CviQI GTAC 3 cut(s) 772, 869, 943
DdeI CTNAG 7 cut(s) 208, 243, 515, 677, 894, 1395, 1449
DpnI GATC 6 cut(s) 241, 399, 537, 663, 752, 1230
DpnII GATC 6 cut(s) 239, 397, 535, 661, 750, 1228
DriI GACNNNNNGTC 1 cut(s) 1067
Eam1104I CTCTTC 2 cut(s) 87, 1394
Eam1105I GACNNNNNGTC 1 cut(s) 1067
EarI CTCTTC 2 cut(s) 87, 1394
EciI GGCGGA 1 cut(s) 199
Eco130I CCWWGG 5 cut(s) 171, 684, 742, 829, 1191
Eco24I GRGCYC 1 cut(s) 1290
Eco32I GATATC 1 cut(s) 1270
Eco47I GGWCC 1 cut(s) 681
Eco47III AGCGCT 1 cut(s) 1353
Eco57I CTGAAG 1 cut(s) 212
EcoRI GAATTC 1 cut(s) 840
EcoRII CCWGG 3 cut(s) 491, 806, 1224
EcoRV GATATC 1 cut(s) 1270
EcoT14I CCWWGG 5 cut(s) 171, 684, 742, 829, 1191
EcoT38I GRGCYC 1 cut(s) 1290
ErhI CCWWGG 5 cut(s) 171, 684, 742, 829, 1191
FaeI CATG 6 cut(s) 175, 293, 298, 344, 596, 925
FalI AAGNNNNNCTT 2 cut(s) 329, 361
FaqI GGGAC 1 cut(s) 775
FatI CATG 6 cut(s) 171, 289, 294, 340, 592, 921
FbaI TGATCA 2 cut(s) 397, 661
Fnu4HI GCNGC 5 cut(s) 123, 804, 825, 1058, 1296
FokI GGATG 4 cut(s) 475, 1254, 1258, 1469
FriOI GRGCYC 1 cut(s) 1290
Fsp4HI GCNGC 5 cut(s) 123, 804, 825, 1058, 1296
FspBI CTAG 2 cut(s) 356, 743
GlaI GCGC 3 cut(s) 36, 590, 1353
GluI GCNGC 5 cut(s) 123, 804, 825, 1058, 1296
GsaI CCCAGC 1 cut(s) 605
HaeII RGCGCY 2 cut(s) 38, 1355
HaeIII GGCC 1 cut(s) 940
HapII CCGG 4 cut(s) 236, 256, 574, 727
HgaI GACGC 1 cut(s) 1349
HhaI GCGC 3 cut(s) 37, 591, 1354
Hin1II CATG 6 cut(s) 175, 293, 298, 344, 596, 925
Hin6I GCGC 3 cut(s) 35, 589, 1352
HinP1I GCGC 3 cut(s) 35, 589, 1352
HindIII AAGCTT 1 cut(s) 423
HinfI GANTC 3 cut(s) 4, 788, 1151
HpaII CCGG 4 cut(s) 236, 256, 574, 727
HphI GGTGA 2 cut(s) 563, 986
Hpy166II GTNNAC 2 cut(s) 250, 774
Hpy188I TCNGA 6 cut(s) 244, 393, 402, 755, 992, 1030
Hpy188III TCNNGA 3 cut(s) 8, 134, 608
Hpy8I GTNNAC 2 cut(s) 250, 774
HpyAV CCTTC 7 cut(s) 48, 57, 84, 88, 187, 635, 922
HpyCH4III ACNGT 1 cut(s) 904
HpyCH4IV ACGT 2 cut(s) 12, 300
HpyF10VI GCNNNNNNNGC 9 cut(s) 151, 317, 346, 443, 812, 821, 1217, 1349, 1438
HpyF3I CTNAG 7 cut(s) 208, 243, 515, 677, 894, 1395, 1449
HpySE526I ACGT 2 cut(s) 12, 300
Hsp92II CATG 6 cut(s) 175, 293, 298, 344, 596, 925
HspAI GCGC 3 cut(s) 35, 589, 1352
KroI GCCGGC 1 cut(s) 255
KroNI GCCGGC 1 cut(s) 257
Ksp22I TGATCA 2 cut(s) 397, 661
Kzo9I GATC 6 cut(s) 239, 397, 535, 661, 750, 1228
LmnI GCTCC 3 cut(s) 694, 982, 1423
Lsp1109I GCAGC 5 cut(s) 109, 790, 836, 1044, 1282
LweI GCATC 4 cut(s) 497, 769, 1162, 1207
MaeI CTAG 2 cut(s) 356, 743
MaeII ACGT 2 cut(s) 12, 300
MaeIII GTNAC 3 cut(s) 28, 974, 1088
MalI GATC 6 cut(s) 241, 399, 537, 663, 752, 1230
MboI GATC 6 cut(s) 239, 397, 535, 661, 750, 1228
MboII GAAGA 5 cut(s) 54, 74, 263, 560, 1411
MfeI CAATTG 1 cut(s) 1212
MflI RGATCY 1 cut(s) 239
MhlI GDGCHC 3 cut(s) 207, 384, 1290
MlyI GAGTC 2 cut(s) 797, 1145
MmeI TCCRAC 1 cut(s) 747
MroNI GCCGGC 1 cut(s) 255
MroXI GAANNNNTTC 1 cut(s) 615
MseI TTAA 3 cut(s) 453, 462, 564
MslI CAYNNNNRTG 1 cut(s) 1236
MspI CCGG 4 cut(s) 236, 256, 574, 727
MspR9I CCNGG 4 cut(s) 237, 493, 808, 1226
MunI CAATTG 1 cut(s) 1212
Mva1269I GAATGC 1 cut(s) 212
MvaI CCWGG 3 cut(s) 493, 808, 1226
MwoI GCNNNNNNNGC 9 cut(s) 151, 317, 346, 443, 812, 821, 1217, 1349, 1438
NaeI GCCGGC 1 cut(s) 257
NciI CCSGG 1 cut(s) 237
NcoI CCATGG 1 cut(s) 171
NdeII GATC 6 cut(s) 239, 397, 535, 661, 750, 1228
NgoMIV GCCGGC 1 cut(s) 255
NlaIII CATG 6 cut(s) 175, 293, 298, 344, 596, 925
NlaIV GGNNCC 2 cut(s) 690, 1361
NmeAIII GCCGAG 2 cut(s) 413, 1027
NmuCI GTSAC 2 cut(s) 28, 974
NspI RCATGY 1 cut(s) 344
NspV TTCGAA 1 cut(s) 838
PaeI GCATGC 1 cut(s) 344
PctI GAATGC 1 cut(s) 212
PdiI GCCGGC 1 cut(s) 257
PdmI GAANNNNTTC 1 cut(s) 615
PkrI GCNGC 5 cut(s) 124, 805, 826, 1059, 1297
PleI GAGTC 2 cut(s) 796, 1145
PpsI GAGTC 2 cut(s) 796, 1145
Psp6I CCWGG 3 cut(s) 491, 806, 1224
PspFI CCCAGC 1 cut(s) 601
PspGI CCWGG 3 cut(s) 491, 806, 1224
PspN4I GGNNCC 2 cut(s) 690, 1361
PspPI GGNCC 1 cut(s) 681
PsuI RGATCY 1 cut(s) 239
RsaI GTAC 3 cut(s) 773, 870, 944
RsaNI GTAC 3 cut(s) 772, 869, 943
RseI CAYNNNNRTG 1 cut(s) 1236
SaqAI TTAA 3 cut(s) 453, 462, 564
SatI GCNGC 5 cut(s) 123, 804, 825, 1058, 1296
Sau3AI GATC 6 cut(s) 239, 397, 535, 661, 750, 1228
Sau96I GGNCC 1 cut(s) 681
SchI GAGTC 2 cut(s) 797, 1145
ScrFI CCNGG 4 cut(s) 237, 493, 808, 1226
SduI GDGCHC 3 cut(s) 207, 384, 1290
SfaNI GCATC 4 cut(s) 497, 769, 1162, 1207
SfcI CTRYAG 1 cut(s) 819
SfuI TTCGAA 1 cut(s) 838
SinI GGWCC 1 cut(s) 681
SmiMI CAYNNNNRTG 1 cut(s) 1236
SmlI CTYRAG 2 cut(s) 6, 113
SmoI CTYRAG 2 cut(s) 6, 113
SphI GCATGC 1 cut(s) 344
SsiI CCGC 1 cut(s) 184
SspI AATATT 1 cut(s) 997
SspMI CTAG 2 cut(s) 356, 743
StyD4I CCNGG 4 cut(s) 235, 491, 806, 1224
StyI CCWWGG 5 cut(s) 171, 684, 742, 829, 1191
TaaI ACNGT 1 cut(s) 904
TaiI ACGT 2 cut(s) 15, 303
TaqI TCGA 5 cut(s) 133, 448, 477, 694, 838
TaqII GACCGA 1 cut(s) 1047
TatI WGTACW 1 cut(s) 771
Tru1I TTAA 3 cut(s) 453, 462, 564
Tru9I TTAA 3 cut(s) 453, 462, 564
TscAI CASTG 2 cut(s) 781, 1350
TseFI GTSAC 2 cut(s) 28, 974
TseI GCWGC 5 cut(s) 122, 803, 824, 1057, 1295
Tsp45I GTSAC 2 cut(s) 28, 974
TspDTI ATGAA 4 cut(s) 35, 74, 300, 537
TspGWI ACGGA 1 cut(s) 1190
TspRI CASTG 2 cut(s) 781, 1350
VpaK11BI GGWCC 1 cut(s) 681
XapI RAATTY 2 cut(s) 52, 840
XceI RCATGY 1 cut(s) 344
XcmI CCANNNNNNNNNTGG 1 cut(s) 481
XmaJI CCTAGG 1 cut(s) 742
XmnI GAANNNNTTC 1 cut(s) 615
XspI CTAG 2 cut(s) 356, 743
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.