Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0002752

Physical Location & Seq

Genomic Coordinates Forward (+)

666695 .. 669625

Gene Structure 2931 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1008900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1479 bp

ATGAGTAATCAAGACGTGCAGATGAAAGACGACGAATCCCAATCCCAATCCAAACCCTCTTTCCATTCCGATTCGGCTTCCACTCTGCAGCATTTGAAGGAGGCGGCGTCGTTTATTGAGGCCGCTTCCTCCACCAAAGAGGTCCGCAGAATATCTCGCGCCGTCCGCCTCACGGTTGCGCTCCGCCGCAAGCTCACAGCCGCCGTGCTCTCTGCATTTCTCGATTTCGCTCTTCTTCCTGGTTCTGAAGCACACGCGCATTTGTCTGCCTACCTTAAGAATGATAAGCATGACATGGAAGTTGACAATGATGCTGCAGCTTCTCCTGTTCAAGTTCCGGCAAAGCACGCGTTGCCCGAGCTCGATATCTACTGTTACTTGCTTGTGATACTTTTTCTGATTGATCAGAAAAGATACGATGAGGCGAAAGCTTGTTCCTCAGCTAGTATTGCGCGAATTAAGAGTTTCAATAGAAGAACCGTCGATGTTCTAGCATCCAGATTGTACTTTTATTACTCGTTTTGCTATGAGCTGACTGGAAATCTTGCTGAAATTCGGGGCAACCTCCTTGCGCTGCATCGCATTGCCACATTGCGTCATGATGAGTTGGGTCAGGAAACACTTCTCAACCTGTTACTTCGAAACTATCTCCATTATAACCTATATGACCAGGCAGAGAAGCTAAGGTCTAAGGCACCACGATTTGAAGCACATTCAAACCAACAGTTTTGCCGTTATCTCTTCTACCTTGGAAAGATTCGGACAATACAATTGGAGTATACAGATGCAAAAGAGTCTCTCTTGCAGGCTGCTCGTAAAGCCCCTCTTGCAGCCCAAGGTTTCCGAATTCAATGTAACAAATGGGCTGTCTTGGTTCGCCTGCTGCTTGGGGAAATACCAGAGAGGATCATCTTCATGCAGAAAGGAATGGAAAAAGCTTTGAGGCCATACTTTGAACTTACAAATGCTGTTCGAATTGGTGATTTAGAACTATTCAGAAATGTTGCAGCAAAGTTTTCTGGCACTTTCAGTAAGGACCAAACCCACAATTTAATTGTTCGGCTGCGACATAATGTCATCAGGACAGGATTGCGAAATATCAGCATCTCTTATTCGCGCATCTCACTTGCTGATGTTGCCGAGAAGTTAAGATTGGTTTCAGGAAACCCAATCGCGGATGCTGAAAGCATCGTGGCTAAGGCTATCCGTGACGGCGCCATTGAGGCCTCGTTAGATCATGCAAATGGGTGGATGGTGTCCAAGGAAACTGGAGACATTTACTCTACTAATGAGCCTCAGGCTGCTTTCAACTCCAGGATTGCCTTTTGTCTCAACATGCACAACGAAGCAGTTCGGGCCCTGCGGTTTCCTCCAAATCCACACAAGGAGAAAGAGAGTGCTGAGAGGAGAGAGAGGCAACAACAGGAGCAAGAGCTTGCCAACCATATTGCAGAGGACGACGACGACGACGATTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000502 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005838 GO:0005886 GO:0005911 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0008541 GO:0009056 GO:0009057 GO:0009506 GO:0009987 GO:0016020 GO:0019538 GO:0019941 GO:0022624 GO:0030054 GO:0030163 GO:0032991 GO:0043170 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0051603 GO:0055044 GO:0071704 GO:0071944 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1905368 GO:1905369

KEGG Pathways

Metabolic & Signaling

ko03050 ko05169 map03050 map05169

Pfam Domains

Protein Families

PCI Rpn3_C

Protein Analysis

493

Amino Acids

55.87

Weight (kDa)

8.1

Isoelectric Point (pI)

46.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_PSMD3_N	PF25573	26 - 321	3.5e-107	PSMD3-like, N-terminal TPR repeats
PCI	PF01399	340 - 421	6.3e-19	PCI domain
Rpn3_C	PF08375	425 - 490	1.2e-25	Proteasome regulatory subunit C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002752)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20200 AT1G75990
fragaria_vesca	FvH4_2g15510 FvH4_2g15510
malus_domestica	MD05G1123400.v1.1 MD08G1008900.v1.1 MD10G1126400.v1.1
prunus_persica	Prupe.1G360600_v2.0.a1 Prupe.1G360600_v2.0.a1 Prupe.8G167300_v2.0.a1
pyrus_communis	pycom05g11770 pycom06g20010 pycom10g10860
rosa_chinensis	RchiOBHm_Chr6g0278511
rosa_laevigata	RLG00000007962 RLG00000013222
rosa_multiflora	Rmu_sc0000258.1_g000009 Rmu_sc0002777.1_g000004
rosa_roxburghii	Rroxscaffold_1G00029920 Rroxscaffold_4G00323800 Rroxscaffold_7G00189830 Rroxscaffold_7G00190320
rosa_rugosa	Rorug06G0117600
rosa_samantha	Rh2AG183600 Rh2AG196400 Rh2BG209000 Rh2DG190000 Rh2DG204200 Rh4AG134600 Rh4AG183800 Rh4DG179200 Rh5AG337600 Rh6AG226700 Rh6BG230900 Rh6CG234000 Rh6DG225300
rosa_wichuraiana	Rw0G003080 Rw4G016480 Rw6G019790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	657
AccB1I	GGYRCC	2 cut(s)	694, 1214
AccI	GTMKAC	1 cut(s)	779
AccII	CGCG	6 cut(s)	159, 257, 350, 454, 1117, 1175
AciI	CCGC	9 cut(s)	104, 123, 145, 166, 184, 187, 201, 1175, 1363
AclWI	GGATC	1 cut(s)	914
AcsI	RAATTY	2 cut(s)	552, 846
AcuI	CTGAAG	1 cut(s)	267
AcyI	GRCGYC	2 cut(s)	107, 1215
AfaI	GTAC	1 cut(s)	506
AfiI	CCNNNNNNNGG	2 cut(s)	172, 1174
AflII	CTTAAG	1 cut(s)	275
AflIII	ACRYGT	1 cut(s)	348
AgsI	TTSAA	8 cut(s)	97, 332, 469, 707, 717, 851, 956, 1309
AhdI	GACNNNNNGTC	1 cut(s)	1073
AjiI	CACGTC	1 cut(s)	16
AjnI	CCWGG	3 cut(s)	238, 669, 1313
AjuI	GAANNNNNNNTTGG	4 cut(s)	44, 76, 1136, 1168
AluBI	AGCT	9 cut(s)	193, 320, 361, 431, 443, 532, 682, 938, 1435
AluI	AGCT	9 cut(s)	193, 320, 361, 431, 443, 532, 682, 938, 1435
Alw21I	GWGCWC	2 cut(s)	210, 363
Alw26I	GTCTC	3 cut(s)	801, 1266, 1334
AlwI	GGATC	1 cut(s)	914
Ama87I	CYCGRG	1 cut(s)	356
AoxI	GGCC	4 cut(s)	120, 944, 1224, 1356
ApaI	GGGCCC	1 cut(s)	1360
ApoI	RAATTY	2 cut(s)	552, 846
ArsI	GACNNNNNNTTYG	2 cut(s)	852, 884
Asp700I	GAANNNNTTC	2 cut(s)	621, 1350
AspLEI	GCGC	7 cut(s)	161, 181, 259, 454, 574, 1119, 1217
AspS9I	GGNCC	4 cut(s)	142, 1036, 1356, 1357
AsuHPI	GGTGA	1 cut(s)	992
AsuII	TTCGAA	2 cut(s)	640, 973
AvaI	CYCGRG	1 cut(s)	356
AvaII	GGWCC	2 cut(s)	142, 1036
AxyI	CCTNAGG	1 cut(s)	1296
BaeGI	GKGCMC	1 cut(s)	1360
BanI	GGYRCC	2 cut(s)	694, 1214
BanII	GRGCYC	2 cut(s)	363, 1360
Bbv12I	GWGCWC	2 cut(s)	210, 363
BbvCI	CCTCAGC	1 cut(s)	439
BccI	CCATC	1 cut(s)	1246
BceAI	ACGGC	4 cut(s)	146, 188, 717, 1228
BcgI	CGANNNNNNTGC	2 cut(s)	794, 828
BciT130I	CCWGG	3 cut(s)	240, 671, 1315
BclI	TGATCA	1 cut(s)	403
BcoDI	GTCTC	3 cut(s)	801, 1266, 1334
BfaI	CTAG	2 cut(s)	444, 491
BfmI	CTRYAG	2 cut(s)	86, 315
BfoI	RGCGCY	1 cut(s)	1218
BfrI	CTTAAG	1 cut(s)	275
BglI	GCCNNNNNGGC	1 cut(s)	1223
Bme1390I	CCNGG	3 cut(s)	240, 671, 1315
Bme18I	GGWCC	2 cut(s)	142, 1036
BmeRI	GACNNNNNGTC	1 cut(s)	1073
BmeT110I	CYCGRG	1 cut(s)	356
BmgBI	CACGTC	1 cut(s)	16
BmgT120I	GGNCC	4 cut(s)	142, 1036, 1356, 1357
BmiI	GGNNCC	3 cut(s)	696, 1216, 1358
BmrFI	CCNGG	3 cut(s)	240, 671, 1315
BmsI	GCATC	8 cut(s)	301, 503, 586, 775, 1113, 1128, 1168, 1197
BpmI	CTGGAG	2 cut(s)	1290, 1297
Bpu10I	CCTNAGC	3 cut(s)	439, 683, 1197
Bpu14I	TTCGAA	2 cut(s)	640, 973
BsaHI	GRCGYC	2 cut(s)	107, 1215
BsaJI	CCNNGG	3 cut(s)	748, 835, 1260
BsaXI	ACNNNNNCTCC	2 cut(s)	92, 122
Bsc4I	CCNNNNNNNGG	2 cut(s)	172, 1174
Bse1I	ACTGG	2 cut(s)	541, 1273
Bse21I	CCTNAGG	1 cut(s)	1296
Bse3DI	GCAATG	2 cut(s)	582, 590
BseBI	CCWGG	3 cut(s)	240, 671, 1315
BseDI	CCNNGG	3 cut(s)	748, 835, 1260
BseGI	GGATG	3 cut(s)	494, 1183, 1257
BseLI	CCNNNNNNNGG	2 cut(s)	172, 1174
BseMI	GCAATG	2 cut(s)	582, 590
BseMII	CTCAG	3 cut(s)	453, 1310, 1392
BseNI	ACTGG	2 cut(s)	541, 1273
BseRI	GAGGAG	1 cut(s)	1420
BseSI	GKGCMC	1 cut(s)	1360
BsgI	GTGCAG	1 cut(s)	38
Bsh1236I	CGCG	6 cut(s)	159, 257, 350, 454, 1117, 1175
BshFI	GGCC	4 cut(s)	122, 946, 1226, 1358
BshNI	GGYRCC	2 cut(s)	694, 1214
BsiHKAI	GWGCWC	2 cut(s)	210, 363
BsiHKCI	CYCGRG	1 cut(s)	356
BsiSI	CCGG	1 cut(s)	338
BslI	CCNNNNNNNGG	2 cut(s)	172, 1174
BsmAI	GTCTC	3 cut(s)	801, 1266, 1334
BsnI	GGCC	4 cut(s)	122, 946, 1226, 1358
BsoBI	CYCGRG	1 cut(s)	356
Bsp119I	TTCGAA	2 cut(s)	640, 973
Bsp120I	GGGCCC	1 cut(s)	1356
Bsp1286I	GDGCHC	3 cut(s)	210, 363, 1360
Bsp143I	GATC	3 cut(s)	403, 906, 1234
BspACI	CCGC	9 cut(s)	104, 123, 145, 166, 184, 187, 201, 1175, 1363
BspANI	GGCC	4 cut(s)	122, 946, 1226, 1358
BspCNI	CTCAG	3 cut(s)	452, 1309, 1393
BspFNI	CGCG	6 cut(s)	159, 257, 350, 454, 1117, 1175
BspHI	TCATGA	1 cut(s)	598
BspLI	GGNNCC	3 cut(s)	696, 1216, 1358
BspMAI	CTGCAG	2 cut(s)	90, 319
BspPI	GGATC	1 cut(s)	914
BspQI	GCTCTTC	1 cut(s)	237
BspT104I	TTCGAA	2 cut(s)	640, 973
BspT107I	GGYRCC	2 cut(s)	694, 1214
BspTI	CTTAAG	1 cut(s)	275
BsrDI	GCAATG	2 cut(s)	582, 590
BsrI	ACTGG	2 cut(s)	541, 1273
BssECI	CCNNGG	3 cut(s)	748, 835, 1260
BssMI	GATC	3 cut(s)	403, 906, 1234
BssNAI	GTATAC	1 cut(s)	780
BssNI	GRCGYC	2 cut(s)	107, 1215
BssT1I	CCWWGG	3 cut(s)	748, 835, 1260
Bst1107I	GTATAC	1 cut(s)	780
Bst2UI	CCWGG	3 cut(s)	240, 671, 1315
Bst4CI	ACNGT	4 cut(s)	175, 374, 481, 726
Bst6I	CTCTTC	2 cut(s)	237, 746
BstACI	GRCGYC	2 cut(s)	107, 1215
BstAFI	CTTAAG	1 cut(s)	275
BstAPI	GCANNNNNTGC	1 cut(s)	352
BstBI	TTCGAA	2 cut(s)	640, 973
BstC8I	GCNNGC	5 cut(s)	191, 348, 807, 881, 1437
BstDEI	CTNAG	6 cut(s)	439, 683, 690, 1197, 1296, 1401
BstF5I	GGATG	3 cut(s)	494, 1183, 1257
BstFNI	CGCG	6 cut(s)	159, 257, 350, 454, 1117, 1175
BstH2I	RGCGCY	1 cut(s)	1218
BstHHI	GCGC	7 cut(s)	161, 181, 259, 454, 574, 1119, 1217
BstKTI	GATC	3 cut(s)	406, 909, 1237
BstMAI	GTCTC	3 cut(s)	801, 1266, 1334
BstMBI	GATC	3 cut(s)	403, 906, 1234
BstMWI	GCNNNNNNNGC	9 cut(s)	165, 347, 352, 449, 818, 827, 1136, 1223, 1355
BstNI	CCWGG	3 cut(s)	240, 671, 1315
BstNSI	RCATGY	1 cut(s)	1339
BstSCI	CCNGG	3 cut(s)	238, 669, 1313
BstSFI	CTRYAG	2 cut(s)	86, 315
BstSLI	GKGCMC	1 cut(s)	1360
BstUI	CGCG	6 cut(s)	159, 257, 350, 454, 1117, 1175
BstZ17I	GTATAC	1 cut(s)	780
Bsu36I	CCTNAGG	1 cut(s)	1296
BsuRI	GGCC	4 cut(s)	122, 946, 1226, 1358
BtgZI	GCGATG	1 cut(s)	563
BtrI	CACGTC	1 cut(s)	16
BtsCI	GGATG	3 cut(s)	494, 1183, 1257
Cac8I	GCNNGC	5 cut(s)	191, 348, 807, 881, 1437
CciI	TCATGA	1 cut(s)	598
CfoI	GCGC	7 cut(s)	161, 181, 259, 454, 574, 1119, 1217
Cfr13I	GGNCC	4 cut(s)	142, 1036, 1356, 1357
CseI	GACGC	2 cut(s)	96, 584
Csp6I	GTAC	1 cut(s)	505
CviAII	CATG	6 cut(s)	290, 295, 599, 916, 1238, 1336
CviQI	GTAC	1 cut(s)	505
DdeI	CTNAG	6 cut(s)	439, 683, 690, 1197, 1296, 1401
DinI	GGCGCC	1 cut(s)	1216
DpnI	GATC	3 cut(s)	405, 908, 1236
DpnII	GATC	3 cut(s)	403, 906, 1234
DriI	GACNNNNNGTC	1 cut(s)	1073
Eam1104I	CTCTTC	2 cut(s)	237, 746
Eam1105I	GACNNNNNGTC	1 cut(s)	1073
EarI	CTCTTC	2 cut(s)	237, 746
EciI	GGCGGA	2 cut(s)	155, 173
Ecl136II	GAGCTC	1 cut(s)	361
Eco130I	CCWWGG	3 cut(s)	748, 835, 1260
Eco147I	AGGCCT	1 cut(s)	1226
Eco24I	GRGCYC	2 cut(s)	363, 1360
Eco32I	GATATC	1 cut(s)	367
Eco47I	GGWCC	2 cut(s)	142, 1036
Eco53kI	GAGCTC	1 cut(s)	361
Eco57I	CTGAAG	1 cut(s)	267
Eco81I	CCTNAGG	1 cut(s)	1296
Eco88I	CYCGRG	1 cut(s)	356
EcoICRI	GAGCTC	1 cut(s)	361
EcoO109I	RGGNCCY	1 cut(s)	1357
EcoRI	GAATTC	1 cut(s)	846
EcoRII	CCWGG	3 cut(s)	238, 669, 1313
EcoRV	GATATC	1 cut(s)	367
EcoT14I	CCWWGG	3 cut(s)	748, 835, 1260
EcoT38I	GRGCYC	2 cut(s)	363, 1360
EgeI	GGCGCC	1 cut(s)	1216
EheI	GGCGCC	1 cut(s)	1216
ErhI	CCWWGG	3 cut(s)	748, 835, 1260
FaeI	CATG	6 cut(s)	293, 298, 602, 919, 1241, 1339
FalI	AAGNNNNNCTT	2 cut(s)	810, 842
FatI	CATG	6 cut(s)	289, 294, 598, 915, 1237, 1335
FbaI	TGATCA	1 cut(s)	403
FblI	GTMKAC	1 cut(s)	779
FokI	GGATG	3 cut(s)	481, 1190, 1264
FriOI	GRGCYC	2 cut(s)	363, 1360
FspBI	CTAG	2 cut(s)	444, 491
GlaI	GCGC	7 cut(s)	160, 180, 258, 453, 573, 1118, 1216
GsuI	CTGGAG	2 cut(s)	1290, 1297
HaeII	RGCGCY	1 cut(s)	1218
HaeIII	GGCC	4 cut(s)	122, 946, 1226, 1358
HapII	CCGG	1 cut(s)	338
HgaI	GACGC	2 cut(s)	96, 584
HhaI	GCGC	7 cut(s)	161, 181, 259, 454, 574, 1119, 1217
Hin1I	GRCGYC	2 cut(s)	107, 1215
Hin1II	CATG	6 cut(s)	293, 298, 602, 919, 1241, 1339
Hin6I	GCGC	7 cut(s)	159, 179, 257, 452, 572, 1117, 1215
HinP1I	GCGC	7 cut(s)	159, 179, 257, 452, 572, 1117, 1215
HincII	GTYRAC	1 cut(s)	304
HindII	GTYRAC	1 cut(s)	304
HindIII	AAGCTT	2 cut(s)	429, 936
HinfI	GANTC	4 cut(s)	35, 71, 757, 794
HpaII	CCGG	1 cut(s)	338
HphI	GGTGA	1 cut(s)	992
Hpy166II	GTNNAC	2 cut(s)	304, 780
Hpy188I	TCNGA	7 cut(s)	70, 247, 399, 408, 762, 845, 998
Hpy188III	TCNNGA	7 cut(s)	11, 221, 498, 599, 614, 1081, 1161
Hpy8I	GTNNAC	2 cut(s)	304, 780
Hpy99I	CGWCG	7 cut(s)	35, 112, 485, 1463, 1466, 1469, 1472
HpyAV	CCTTC	1 cut(s)	91
HpyCH4III	ACNGT	4 cut(s)	175, 374, 481, 726
HpyCH4IV	ACGT	1 cut(s)	15
HpyF10VI	GCNNNNNNNGC	9 cut(s)	165, 347, 352, 449, 818, 827, 1136, 1223, 1355
HpyF3I	CTNAG	6 cut(s)	439, 683, 690, 1197, 1296, 1401
HpySE526I	ACGT	1 cut(s)	15
Hsp92I	GRCGYC	2 cut(s)	107, 1215
Hsp92II	CATG	6 cut(s)	293, 298, 602, 919, 1241, 1339
HspAI	GCGC	7 cut(s)	159, 179, 257, 452, 572, 1117, 1215
KasI	GGCGCC	1 cut(s)	1214
Ksp22I	TGATCA	1 cut(s)	403
Kzo9I	GATC	3 cut(s)	403, 906, 1234
LguI	GCTCTTC	1 cut(s)	237
LmnI	GCTCC	2 cut(s)	186, 1426
LweI	GCATC	8 cut(s)	301, 503, 586, 775, 1113, 1128, 1168, 1197
MaeI	CTAG	2 cut(s)	444, 491
MaeII	ACGT	1 cut(s)	15
MaeIII	GTNAC	4 cut(s)	374, 633, 854, 1208
MalI	GATC	3 cut(s)	405, 908, 1236
MboI	GATC	3 cut(s)	403, 906, 1234
MboII	GAAGA	5 cut(s)	224, 227, 486, 733, 904
MfeI	CAATTG	1 cut(s)	770
MhlI	GDGCHC	3 cut(s)	210, 363, 1360
MluCI	AATT	7 cut(s)	456, 552, 770, 846, 975, 1048, 1053
MluI	ACGCGT	1 cut(s)	348
Mly113I	GGCGCC	1 cut(s)	1215
MlyI	GAGTC	1 cut(s)	803
MroXI	GAANNNNTTC	2 cut(s)	621, 1350
MseI	TTAA	5 cut(s)	276, 459, 1052, 1148, 1477
MslI	CAYNNNNRTG	2 cut(s)	914, 1242
MspCI	CTTAAG	1 cut(s)	275
MspI	CCGG	1 cut(s)	338
MspR9I	CCNGG	3 cut(s)	240, 671, 1315
MunI	CAATTG	1 cut(s)	770
MvaI	CCWGG	3 cut(s)	240, 671, 1315
MvnI	CGCG	6 cut(s)	159, 257, 350, 454, 1117, 1175
MwoI	GCNNNNNNNGC	9 cut(s)	165, 347, 352, 449, 818, 827, 1136, 1223, 1355
NarI	GGCGCC	1 cut(s)	1215
NdeII	GATC	3 cut(s)	403, 906, 1234
NlaIII	CATG	6 cut(s)	293, 298, 602, 919, 1241, 1339
NlaIV	GGNNCC	3 cut(s)	696, 1216, 1358
NmeAIII	GCCGAG	1 cut(s)	1165
NmuCI	GTSAC	1 cut(s)	1208
NspI	RCATGY	1 cut(s)	1339
NspV	TTCGAA	2 cut(s)	640, 973
PagI	TCATGA	1 cut(s)	598
PceI	AGGCCT	1 cut(s)	1226
PciSI	GCTCTTC	1 cut(s)	237
PcsI	WCGNNNNNNNCGW	3 cut(s)	354, 1464, 1467
PdmI	GAANNNNTTC	2 cut(s)	621, 1350
PfeI	GAWTC	3 cut(s)	35, 71, 757
PfoI	TCCNGGA	1 cut(s)	1313
PleI	GAGTC	1 cut(s)	802
PluTI	GGCGCC	1 cut(s)	1218
PpsI	GAGTC	1 cut(s)	802
PsiI	TTATAA	1 cut(s)	657
Psp124BI	GAGCTC	1 cut(s)	363
Psp6I	CCWGG	3 cut(s)	238, 669, 1313
PspGI	CCWGG	3 cut(s)	238, 669, 1313
PspN4I	GGNNCC	3 cut(s)	696, 1216, 1358
PspOMI	GGGCCC	1 cut(s)	1356
PspPI	GGNCC	4 cut(s)	142, 1036, 1356, 1357
PstI	CTGCAG	2 cut(s)	90, 319
RsaI	GTAC	1 cut(s)	506
RsaNI	GTAC	1 cut(s)	505
RseI	CAYNNNNRTG	2 cut(s)	914, 1242
SacI	GAGCTC	1 cut(s)	363
SapI	GCTCTTC	1 cut(s)	237
SaqAI	TTAA	5 cut(s)	276, 459, 1052, 1148, 1477
Sau3AI	GATC	3 cut(s)	403, 906, 1234
Sau96I	GGNCC	4 cut(s)	142, 1036, 1356, 1357
SchI	GAGTC	1 cut(s)	803
ScrFI	CCNGG	3 cut(s)	240, 671, 1315
SduI	GDGCHC	3 cut(s)	210, 363, 1360
SfaNI	GCATC	8 cut(s)	301, 503, 586, 775, 1113, 1128, 1168, 1197
SfcI	CTRYAG	2 cut(s)	86, 315
SfoI	GGCGCC	1 cut(s)	1216
SfuI	TTCGAA	2 cut(s)	640, 973
SinI	GGWCC	2 cut(s)	142, 1036
SmiMI	CAYNNNNRTG	2 cut(s)	914, 1242
SmlI	CTYRAG	1 cut(s)	275
SmoI	CTYRAG	1 cut(s)	275
Sse9I	AATT	7 cut(s)	456, 552, 770, 846, 975, 1048, 1053
SseBI	AGGCCT	1 cut(s)	1226
SsiI	CCGC	9 cut(s)	104, 123, 145, 166, 184, 187, 201, 1175, 1363
SspDI	GGCGCC	1 cut(s)	1214
SspMI	CTAG	2 cut(s)	444, 491
SstI	GAGCTC	1 cut(s)	363
StuI	AGGCCT	1 cut(s)	1226
StyD4I	CCNGG	3 cut(s)	238, 669, 1313
StyI	CCWWGG	3 cut(s)	748, 835, 1260
TaaI	ACNGT	4 cut(s)	175, 374, 481, 726
TaiI	ACGT	1 cut(s)	18
TaqI	TCGA	5 cut(s)	222, 363, 483, 640, 973
TasI	AATT	7 cut(s)	456, 552, 770, 846, 975, 1048, 1053
TatI	WGTACW	1 cut(s)	504
TauI	GCSGC	4 cut(s)	107, 125, 189, 203
TfiI	GAWTC	3 cut(s)	35, 71, 757
Tru1I	TTAA	5 cut(s)	276, 459, 1052, 1148, 1477
Tru9I	TTAA	5 cut(s)	276, 459, 1052, 1148, 1477
TseFI	GTSAC	1 cut(s)	1208
Tsp45I	GTSAC	1 cut(s)	1208
TspDTI	ATGAA	2 cut(s)	38, 904
TspGWI	ACGGA	1 cut(s)	1196
Vha464I	CTTAAG	1 cut(s)	275
VpaK11BI	GGWCC	2 cut(s)	142, 1036
XapI	RAATTY	2 cut(s)	552, 846
XceI	RCATGY	1 cut(s)	1339
XmiI	GTMKAC	1 cut(s)	779
XmnI	GAANNNNTTC	2 cut(s)	621, 1350
XspI	CTAG	2 cut(s)	444, 491

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.