Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0002752

Physical Location & Seq

Genomic Coordinates Reverse (-)

23215845 .. 23217458

Gene Structure 1614 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g20010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

ATGGTTGAGATTTGGGAGACTGTTCCTCGTATTCTCTCTTCTGTCTCGCATAAACTTGCAGAGGAGGAAACCATCGCAAAACCCTGGTTCATCAGTCGCCAAATCGATTCCGATCAGCGCGAGCCGCCACCAGATTCAAGTCTCTACAAGATGACTCACGACGTGGAGATGAAGGAGGTCCCGGCGCCTTCCAACTCAGTTTCTTCGACTTCTCCGTCCACTTTACACAATTTGAAGGAGATTGCTTCACTCCTTGAGACTGCTGCTTATACACGGGAGGTTAGGCGGATTGTGCGTGCCGTTAGGCTAACGATGGTGTTGAGGCGGAAGCTGAAGGTTTCTGTGATTTCAGCATTCCTCAATTTTGCCCTTACACCGGGATCTGAGGTTCATAGCCGTTTATCGTCCTTTCTTCCCAAGGATGATGAACAGGATATGGACGTTGATACCGCAACATCTGCTACTCAAGTTCCCGCAAAACATGCCTTGCCAGAGCTAGAGATGTACTCCTACTTGCTTGTGCTCATTTTTCTGATTGATCAGAAAAAGTACAATGAGGCTAAAGCCTGTGCCTCGGCAAGCATTGCTCGTATTAAGAACTTGAATAGGAGAACCATTGACGTTCTGGCATCCAGGCTGTACTTCTATTACTCCCTGAGCTATGAACTCACTGGTGATCTTGCAGAAATTAGAGGAAATCTCCTGAATCTTCACCGGATTGCCACTTTGCGCCATGATGAGATGGGTCAGGAAACACTTCTTAATCTTCTGCTTCGCAATTATCTCCACTATAACCTGTATGATCAGGCAGAGAAACTGAGGTCCAAGGCACCTCGATTTGAGGCTCACTCCAACCAGCAGTTCTGTCGGTATCTCTTTCACCTAGGAAAGATCAGAACAATTCAGTTGGAGTACACTGATGCAAAGGCGTCCCTCCTGCAAGCTGCTAGGAAAGCTCCTACACCAGCCCTTGGTTTTCGGATTCAGTGCAACAAGTGGGCAATCATTGTACGCTTGTTGCTTGGAGAAATCCCTGAGAGAACCGTTTTTATGCAAAAAGGCATGGAGAAGGCGTTGCGGCCATACTACGAAATAACAAATGCTGTGAGAATTGGTGACTGGGAGCTTTTCAAGAATATTGCAGAAAAGTTCTCGGATGTATTCAACGCAGACCGAACCCACAATTTGATTGTTAGGCTGCGACATAATGTCATAAGGACAGGGTTGCGTAACATTAGCATATCTTATTCCCGTATTTCTCTGGTTGATGTTGCTAAAAAGTTGCGATTGGACTCTCCTAACCCGGTTGCTGATGCTGAAAGCATTGTGGCGAAGGCAATCCGAGATGGTGCAATTGATGCCGCTCTGGATCATGCAAATGGATGGATGGTGTCAAAGGAAACTGGGGATATCTACTCCACTAACGAGCCCCAAGCTGCATTCGACACAAGAATTGCATTTTGCCTCAATTTGCCCAACGACGCATTGCGAGCACTTAGGTTCCCACCAAATTCCCACAAGGAGAAAGAAAGTGCTGAGAAGAGGAGGGAGAGGCAACAACAGGAGCAAGAGCTTGCAAAGCACATAGCCGAGGAAGATGATGATGAGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko03050 ko05169 map03050 map05169

Pfam Domains

Protein Families

PCI Rpn3_C

Protein Analysis

538

Amino Acids

61.42

Weight (kDa)

8.42

Isoelectric Point (pI)

46.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_PSMD3_N	PF25573	73 - 366	8.1e-106	PSMD3-like, N-terminal TPR repeats
PCI	PF01399	383 - 466	2.4e-18	PCI domain
Rpn3_C	PF08375	470 - 535	2.3e-24	Proteasome regulatory subunit C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002752)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20200 AT1G75990
fragaria_vesca	FvH4_2g15510 FvH4_2g15510
malus_domestica	MD05G1123400.v1.1 MD08G1008900.v1.1 MD10G1126400.v1.1
prunus_persica	Prupe.1G360600_v2.0.a1 Prupe.1G360600_v2.0.a1 Prupe.8G167300_v2.0.a1
pyrus_communis	pycom05g11770 pycom06g20010 pycom10g10860
rosa_chinensis	RchiOBHm_Chr6g0278511
rosa_laevigata	RLG00000007962 RLG00000013222
rosa_multiflora	Rmu_sc0000258.1_g000009 Rmu_sc0002777.1_g000004
rosa_roxburghii	Rroxscaffold_1G00029920 Rroxscaffold_4G00323800 Rroxscaffold_7G00189830 Rroxscaffold_7G00190320
rosa_rugosa	Rorug06G0117600
rosa_samantha	Rh2AG183600 Rh2AG196400 Rh2BG209000 Rh2DG190000 Rh2DG204200 Rh4AG134600 Rh4AG183800 Rh4DG179200 Rh5AG337600 Rh6AG226700 Rh6BG230900 Rh6CG234000 Rh6DG225300
rosa_wichuraiana	Rw0G003080 Rw4G016480 Rw6G019790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	214
AccB1I	GGYRCC	2 cut(s)	184, 829
AccB7I	CCANNNNNTGG	1 cut(s)	971
AccBSI	CCGCTC	1 cut(s)	1364
AccII	CGCG	1 cut(s)	120
AciI	CCGC	7 cut(s)	125, 286, 325, 450, 474, 1078, 1362
AclWI	GGATC	2 cut(s)	388, 1377
AcoI	YGGCCR	1 cut(s)	1079
AcsI	RAATTY	1 cut(s)	1510
AcuI	CTGAAG	1 cut(s)	353
AcyI	GRCGYC	2 cut(s)	185, 929
AdeI	CACNNNGTG	1 cut(s)	163
AfaI	GTAC	5 cut(s)	506, 551, 641, 914, 1011
AfiI	CCNNNNNNNGG	2 cut(s)	376, 971
AgsI	TTSAA	5 cut(s)	138, 235, 604, 1132, 1165
AhdI	GACNNNNNGTC	1 cut(s)	1208
AjiI	CACGTC	1 cut(s)	163
AjnI	CCWGG	2 cut(s)	83, 632
AjuI	GAANNNNNNNTTGG	2 cut(s)	845, 877
AloI	GAACNNNNNNTCC	2 cut(s)	372, 404
AluBI	AGCT	8 cut(s)	331, 496, 660, 944, 956, 1126, 1436, 1573
AluI	AGCT	8 cut(s)	331, 496, 660, 944, 956, 1126, 1436, 1573
Alw21I	GWGCWC	2 cut(s)	525, 1495
Alw26I	GTCTC	4 cut(s)	11, 49, 146, 251
AlwI	GGATC	2 cut(s)	388, 1377
AoxI	GGCC	1 cut(s)	1079
ApeKI	GCWGC	4 cut(s)	263, 944, 1198, 1436
ApoI	RAATTY	1 cut(s)	1510
Asp700I	GAANNNNTTC	1 cut(s)	756
AspA2I	CCTAGG	1 cut(s)	883
AspLEI	GCGC	3 cut(s)	120, 187, 732
AspS9I	GGNCC	2 cut(s)	178, 822
AsuC2I	CCSGG	3 cut(s)	182, 378, 1304
AsuHPI	GGTGA	4 cut(s)	686, 704, 872, 1127
AvaII	GGWCC	2 cut(s)	178, 822
AvrII	CCTAGG	1 cut(s)	883
BanI	GGYRCC	2 cut(s)	184, 829
BanII	GRGCYC	1 cut(s)	1431
BarI	GAAGNNNNNNTAC	2 cut(s)	22, 54
Bbv12I	GWGCWC	2 cut(s)	525, 1495
BbvI	GCAGC	4 cut(s)	250, 931, 1185, 1423
BccI	CCATC	6 cut(s)	80, 307, 736, 1340, 1377, 1381
BceAI	ACGGC	2 cut(s)	284, 381
BcgI	CGANNNNNNTGC	2 cut(s)	848, 882
BciT130I	CCWGG	2 cut(s)	85, 634
BclI	TGATCA	2 cut(s)	538, 802
BcnI	CCSGG	3 cut(s)	182, 378, 1304
BcoDI	GTCTC	4 cut(s)	11, 49, 146, 251
BfaI	CTAG	3 cut(s)	497, 884, 948
BfoI	RGCGCY	1 cut(s)	188
BisI	GCNGC	7 cut(s)	125, 264, 945, 1079, 1199, 1362, 1437
BlnI	CCTAGG	1 cut(s)	883
BlsI	GCNGC	7 cut(s)	126, 265, 946, 1080, 1200, 1363, 1438
Bme1390I	CCNGG	5 cut(s)	85, 182, 378, 634, 1304
Bme18I	GGWCC	2 cut(s)	178, 822
BmeRI	GACNNNNNGTC	1 cut(s)	1208
BmgBI	CACGTC	1 cut(s)	163
BmgT120I	GGNCC	2 cut(s)	178, 822
BmiI	GGNNCC	4 cut(s)	180, 186, 831, 1502
BmrFI	CCNGG	5 cut(s)	85, 182, 378, 634, 1304
BmrI	ACTGGG	2 cut(s)	1129, 1413
BmsI	GCATC	4 cut(s)	638, 910, 1303, 1348
BmuI	ACTGGG	2 cut(s)	1129, 1413
BplI	GAGNNNNNCTC	6 cut(s)	491, 523, 684, 716, 833, 865
Bpu10I	CCTNAGC	1 cut(s)	656
BpuEI	CTTGAG	2 cut(s)	275, 450
BpuMI	CCSGG	3 cut(s)	182, 378, 1304
Bsa29I	ATCGAT	1 cut(s)	105
BsaBI	GATNNNNATC	1 cut(s)	111
BsaHI	GRCGYC	2 cut(s)	185, 929
BsaJI	CCNNGG	7 cut(s)	83, 417, 573, 825, 883, 970, 1590
BsaWI	WCCGGW	1 cut(s)	714
BsaXI	ACNNNNNCTCC	2 cut(s)	1058, 1088
Bsc4I	CCNNNNNNNGG	2 cut(s)	376, 971
Bse1I	ACTGG	3 cut(s)	676, 1124, 1408
Bse3DI	GCAATG	2 cut(s)	582, 1484
Bse8I	GATNNNNATC	1 cut(s)	111
BseBI	CCWGG	2 cut(s)	85, 634
BseCI	ATCGAT	1 cut(s)	105
BseDI	CCNNGG	7 cut(s)	83, 417, 573, 825, 883, 970, 1590
BseGI	GGATG	5 cut(s)	427, 629, 1162, 1388, 1392
BseJI	GATNNNNATC	1 cut(s)	111
BseLI	CCNNNNNNNGG	2 cut(s)	376, 971
BseMI	GCAATG	2 cut(s)	582, 1484
BseMII	CTCAG	6 cut(s)	210, 375, 647, 809, 1026, 1527
BseNI	ACTGG	3 cut(s)	676, 1124, 1408
BseRI	GAGGAG	2 cut(s)	77, 1558
BseXI	GCAGC	4 cut(s)	250, 931, 1185, 1423
Bsh1236I	CGCG	1 cut(s)	120
BshFI	GGCC	1 cut(s)	1081
BshNI	GGYRCC	2 cut(s)	184, 829
BshVI	ATCGAT	1 cut(s)	105
BsiHKAI	GWGCWC	2 cut(s)	525, 1495
BsiSI	CCGG	4 cut(s)	182, 377, 715, 1304
BslFI	GGGAC	2 cut(s)	164, 916
BslI	CCNNNNNNNGG	2 cut(s)	376, 971
BsmAI	GTCTC	4 cut(s)	11, 49, 146, 251
BsmFI	GGGAC	2 cut(s)	164, 916
BsmI	GAATGC	2 cut(s)	353, 1439
BsnI	GGCC	1 cut(s)	1081
Bsp1286I	GDGCHC	3 cut(s)	525, 1431, 1495
Bsp143I	GATC	7 cut(s)	112, 380, 538, 676, 802, 891, 1369
BspACI	CCGC	7 cut(s)	125, 286, 325, 450, 474, 1078, 1362
BspANI	GGCC	1 cut(s)	1081
BspCNI	CTCAG	6 cut(s)	209, 376, 648, 810, 1027, 1528
BspDI	ATCGAT	1 cut(s)	105
BspFNI	CGCG	1 cut(s)	120
BspLI	GGNNCC	4 cut(s)	180, 186, 831, 1502
BspPI	GGATC	2 cut(s)	388, 1377
BspT107I	GGYRCC	2 cut(s)	184, 829
BsrBI	CCGCTC	1 cut(s)	1364
BsrDI	GCAATG	2 cut(s)	582, 1484
BsrI	ACTGG	3 cut(s)	676, 1124, 1408
BssECI	CCNNGG	7 cut(s)	83, 417, 573, 825, 883, 970, 1590
BssMI	GATC	7 cut(s)	112, 380, 538, 676, 802, 891, 1369
BssNI	GRCGYC	2 cut(s)	185, 929
BssT1I	CCWWGG	4 cut(s)	417, 825, 883, 970
Bst2UI	CCWGG	2 cut(s)	85, 634
Bst4CI	ACNGT	2 cut(s)	22, 1045
Bst6I	CTCTTC	2 cut(s)	43, 1535
BstACI	GRCGYC	2 cut(s)	185, 929
BstAPI	GCANNNNNTGC	4 cut(s)	458, 482, 584, 1358
BstC8I	GCNNGC	6 cut(s)	122, 297, 580, 942, 1491, 1575
BstDEI	CTNAG	7 cut(s)	196, 384, 656, 818, 1035, 1496, 1536
BstF5I	GGATG	5 cut(s)	427, 629, 1162, 1388, 1392
BstFNI	CGCG	1 cut(s)	120
BstH2I	RGCGCY	1 cut(s)	188
BstHHI	GCGC	3 cut(s)	120, 187, 732
BstKTI	GATC	7 cut(s)	115, 383, 541, 679, 805, 894, 1372
BstMAI	GTCTC	4 cut(s)	11, 49, 146, 251
BstMBI	GATC	7 cut(s)	112, 380, 538, 676, 802, 891, 1369
BstMWI	GCNNNNNNNGC	9 cut(s)	124, 292, 458, 482, 584, 953, 1358, 1490, 1579
BstNI	CCWGG	2 cut(s)	85, 634
BstNSI	RCATGY	1 cut(s)	485
BstSCI	CCNGG	5 cut(s)	83, 180, 376, 632, 1302
BstUI	CGCG	1 cut(s)	120
BstV1I	GCAGC	4 cut(s)	250, 931, 1185, 1423
BstX2I	RGATCY	1 cut(s)	380
BstYI	RGATCY	1 cut(s)	380
Bsu15I	ATCGAT	1 cut(s)	105
BsuRI	GGCC	1 cut(s)	1081
BsuTUI	ATCGAT	1 cut(s)	105
BtgZI	GCGATG	1 cut(s)	58
BtrI	CACGTC	1 cut(s)	163
BtsCI	GGATG	5 cut(s)	427, 629, 1162, 1388, 1392
BtsIMutI	CAGTG	3 cut(s)	669, 915, 992
Cac8I	GCNNGC	6 cut(s)	122, 297, 580, 942, 1491, 1575
CfoI	GCGC	3 cut(s)	120, 187, 732
Cfr13I	GGNCC	2 cut(s)	178, 822
ClaI	ATCGAT	1 cut(s)	105
CseI	GACGC	2 cut(s)	918, 1490
Csp6I	GTAC	5 cut(s)	505, 550, 640, 913, 1010
CviAII	CATG	4 cut(s)	482, 734, 1063, 1373
CviQI	GTAC	5 cut(s)	505, 550, 640, 913, 1010
DdeI	CTNAG	7 cut(s)	196, 384, 656, 818, 1035, 1496, 1536
DinI	GGCGCC	1 cut(s)	186
DpnI	GATC	7 cut(s)	114, 382, 540, 678, 804, 893, 1371
DpnII	GATC	7 cut(s)	112, 380, 538, 676, 802, 891, 1369
DraIII	CACNNNGTG	1 cut(s)	163
DrdI	GACNNNNNNGTC	1 cut(s)	214
DriI	GACNNNNNGTC	1 cut(s)	1208
DseDI	GACNNNNNNGTC	1 cut(s)	214
EaeI	YGGCCR	1 cut(s)	1079
Eam1104I	CTCTTC	2 cut(s)	43, 1535
Eam1105I	GACNNNNNGTC	1 cut(s)	1208
EarI	CTCTTC	2 cut(s)	43, 1535
EciI	GGCGGA	2 cut(s)	301, 340
Eco130I	CCWWGG	4 cut(s)	417, 825, 883, 970
Eco24I	GRGCYC	1 cut(s)	1431
Eco32I	GATATC	1 cut(s)	1411
Eco47I	GGWCC	2 cut(s)	178, 822
Eco57I	CTGAAG	1 cut(s)	353
EcoO109I	RGGNCCY	1 cut(s)	178
EcoRII	CCWGG	2 cut(s)	83, 632
EcoRV	GATATC	1 cut(s)	1411
EcoT14I	CCWWGG	4 cut(s)	417, 825, 883, 970
EcoT38I	GRGCYC	1 cut(s)	1431
EgeI	GGCGCC	1 cut(s)	186
EheI	GGCGCC	1 cut(s)	186
ErhI	CCWWGG	4 cut(s)	417, 825, 883, 970
FaeI	CATG	4 cut(s)	485, 737, 1066, 1376
FaqI	GGGAC	2 cut(s)	164, 916
FatI	CATG	4 cut(s)	481, 733, 1062, 1372
FauI	CCCGC	1 cut(s)	481
FbaI	TGATCA	2 cut(s)	538, 802
Fnu4HI	GCNGC	7 cut(s)	125, 264, 945, 1079, 1199, 1362, 1437
FokI	GGATG	5 cut(s)	434, 616, 1169, 1395, 1399
FriOI	GRGCYC	1 cut(s)	1431
Fsp4HI	GCNGC	7 cut(s)	125, 264, 945, 1079, 1199, 1362, 1437
FspBI	CTAG	3 cut(s)	497, 884, 948
GlaI	GCGC	3 cut(s)	119, 186, 731
GluI	GCNGC	7 cut(s)	125, 264, 945, 1079, 1199, 1362, 1437
HaeII	RGCGCY	1 cut(s)	188
HaeIII	GGCC	1 cut(s)	1081
HapII	CCGG	4 cut(s)	182, 377, 715, 1304
HgaI	GACGC	2 cut(s)	918, 1490
HhaI	GCGC	3 cut(s)	120, 187, 732
Hin1I	GRCGYC	2 cut(s)	185, 929
Hin1II	CATG	4 cut(s)	485, 737, 1066, 1376
Hin6I	GCGC	3 cut(s)	118, 185, 730
HinP1I	GCGC	3 cut(s)	118, 185, 730
HinfI	GANTC	6 cut(s)	107, 134, 154, 706, 982, 1292
HpaII	CCGG	4 cut(s)	182, 377, 715, 1304
HphI	GGTGA	4 cut(s)	686, 704, 872, 1127
Hpy166II	GTNNAC	2 cut(s)	219, 915
Hpy188I	TCNGA	8 cut(s)	112, 385, 534, 543, 896, 981, 1156, 1343
Hpy188III	TCNNGA	5 cut(s)	158, 703, 749, 1132, 1367
Hpy8I	GTNNAC	2 cut(s)	219, 915
Hpy99I	CGWCG	2 cut(s)	164, 1484
HpyAV	CCTTC	6 cut(s)	166, 198, 229, 328, 1063, 1327
HpyCH4III	ACNGT	2 cut(s)	22, 1045
HpyCH4IV	ACGT	3 cut(s)	162, 441, 621
HpyF10VI	GCNNNNNNNGC	9 cut(s)	124, 292, 458, 482, 584, 953, 1358, 1490, 1579
HpyF3I	CTNAG	7 cut(s)	196, 384, 656, 818, 1035, 1496, 1536
HpySE526I	ACGT	3 cut(s)	162, 441, 621
Hsp92I	GRCGYC	2 cut(s)	185, 929
Hsp92II	CATG	4 cut(s)	485, 737, 1066, 1376
HspAI	GCGC	3 cut(s)	118, 185, 730
KasI	GGCGCC	1 cut(s)	184
Ksp22I	TGATCA	2 cut(s)	538, 802
Kzo9I	GATC	7 cut(s)	112, 380, 538, 676, 802, 891, 1369
LmnI	GCTCC	3 cut(s)	961, 1123, 1564
Lsp1109I	GCAGC	4 cut(s)	250, 931, 1185, 1423
LweI	GCATC	4 cut(s)	638, 910, 1303, 1348
MaeI	CTAG	3 cut(s)	497, 884, 948
MaeII	ACGT	3 cut(s)	162, 441, 621
MaeIII	GTNAC	2 cut(s)	1115, 1229
MalI	GATC	7 cut(s)	114, 382, 540, 678, 804, 893, 1371
MbiI	CCGCTC	1 cut(s)	1364
MboI	GATC	7 cut(s)	112, 380, 538, 676, 802, 891, 1369
MboII	GAAGA	7 cut(s)	30, 195, 404, 701, 758, 1552, 1607
MfeI	CAATTG	1 cut(s)	1353
MflI	RGATCY	1 cut(s)	380
MhlI	GDGCHC	3 cut(s)	525, 1431, 1495
Mly113I	GGCGCC	1 cut(s)	185
MlyI	GAGTC	2 cut(s)	148, 1286
MmeI	TCCRAC	3 cut(s)	216, 876, 888
MroXI	GAANNNNTTC	1 cut(s)	756
MseI	TTAA	2 cut(s)	594, 762
MslI	CAYNNNNRTG	1 cut(s)	1377
MspI	CCGG	4 cut(s)	182, 377, 715, 1304
MspR9I	CCNGG	5 cut(s)	85, 182, 378, 634, 1304
MunI	CAATTG	1 cut(s)	1353
Mva1269I	GAATGC	2 cut(s)	353, 1439
MvaI	CCWGG	2 cut(s)	85, 634
MvnI	CGCG	1 cut(s)	120
MwoI	GCNNNNNNNGC	9 cut(s)	124, 292, 458, 482, 584, 953, 1358, 1490, 1579
NarI	GGCGCC	1 cut(s)	185
NciI	CCSGG	3 cut(s)	182, 378, 1304
NdeII	GATC	7 cut(s)	112, 380, 538, 676, 802, 891, 1369
NlaIII	CATG	4 cut(s)	485, 737, 1066, 1376
NlaIV	GGNNCC	4 cut(s)	180, 186, 831, 1502
NmeAIII	GCCGAG	1 cut(s)	554
NmuCI	GTSAC	1 cut(s)	1115
NspI	RCATGY	1 cut(s)	485
PcsI	WCGNNNNNNNCGW	1 cut(s)	212
PctI	GAATGC	2 cut(s)	353, 1439
PdmI	GAANNNNTTC	1 cut(s)	756
PfeI	GAWTC	4 cut(s)	107, 134, 706, 982
PflMI	CCANNNNNTGG	1 cut(s)	971
PkrI	GCNGC	7 cut(s)	126, 265, 946, 1080, 1200, 1363, 1438
PleI	GAGTC	2 cut(s)	148, 1286
PluTI	GGCGCC	1 cut(s)	188
PpsI	GAGTC	2 cut(s)	148, 1286
PpuMI	RGGWCCY	1 cut(s)	178
Psp5II	RGGWCCY	1 cut(s)	178
Psp6I	CCWGG	2 cut(s)	83, 632
PspGI	CCWGG	2 cut(s)	83, 632
PspN4I	GGNNCC	4 cut(s)	180, 186, 831, 1502
PspPI	GGNCC	2 cut(s)	178, 822
PspPPI	RGGWCCY	1 cut(s)	178
PsuI	RGATCY	1 cut(s)	380
RsaI	GTAC	5 cut(s)	506, 551, 641, 914, 1011
RsaNI	GTAC	5 cut(s)	505, 550, 640, 913, 1010
RseI	CAYNNNNRTG	1 cut(s)	1377
SaqAI	TTAA	2 cut(s)	594, 762
SatI	GCNGC	7 cut(s)	125, 264, 945, 1079, 1199, 1362, 1437
Sau3AI	GATC	7 cut(s)	112, 380, 538, 676, 802, 891, 1369
Sau96I	GGNCC	2 cut(s)	178, 822
SchI	GAGTC	2 cut(s)	148, 1286
ScrFI	CCNGG	5 cut(s)	85, 182, 378, 634, 1304
SduI	GDGCHC	3 cut(s)	525, 1431, 1495
SfaNI	GCATC	4 cut(s)	638, 910, 1303, 1348
SfoI	GGCGCC	1 cut(s)	186
SinI	GGWCC	2 cut(s)	178, 822
SmiMI	CAYNNNNRTG	1 cut(s)	1377
SmlI	CTYRAG	2 cut(s)	254, 465
SmoI	CTYRAG	2 cut(s)	254, 465
SsiI	CCGC	7 cut(s)	125, 286, 325, 450, 474, 1078, 1362
SspDI	GGCGCC	1 cut(s)	184
SspI	AATATT	1 cut(s)	1138
SspMI	CTAG	3 cut(s)	497, 884, 948
StyD4I	CCNGG	5 cut(s)	83, 180, 376, 632, 1302
StyI	CCWWGG	4 cut(s)	417, 825, 883, 970
TaaI	ACNGT	2 cut(s)	22, 1045
TaiI	ACGT	3 cut(s)	165, 444, 624
TaqI	TCGA	4 cut(s)	105, 206, 835, 1443
TaqII	GACCGA	1 cut(s)	1188
TatI	WGTACW	4 cut(s)	504, 549, 639, 912
TauI	GCSGC	3 cut(s)	127, 1081, 1364
TfiI	GAWTC	4 cut(s)	107, 134, 706, 982
Tru1I	TTAA	2 cut(s)	594, 762
Tru9I	TTAA	2 cut(s)	594, 762
TscAI	CASTG	3 cut(s)	676, 922, 992
TseFI	GTSAC	1 cut(s)	1115
TseI	GCWGC	4 cut(s)	263, 944, 1198, 1436
Tsp45I	GTSAC	1 cut(s)	1115
TspDTI	ATGAA	5 cut(s)	79, 185, 380, 441, 678
TspGWI	ACGGA	1 cut(s)	204
TspRI	CASTG	3 cut(s)	676, 922, 992
Van91I	CCANNNNNTGG	1 cut(s)	971
VpaK11BI	GGWCC	2 cut(s)	178, 822
XapI	RAATTY	1 cut(s)	1510
XceI	RCATGY	1 cut(s)	485
XcmI	CCANNNNNNNNNTGG	1 cut(s)	622
XmaJI	CCTAGG	1 cut(s)	883
XmnI	GAANNNNTTC	1 cut(s)	756
XspI	CTAG	3 cut(s)	497, 884, 948

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.