MD07G1118400.v1.1

Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val)

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Forward (+)
14639052 .. 14644520
5469 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1118400.v1.1.491

Sequence Viewer

Length: 1188 bp
ATGGCAGGTGGTGATGTCGCCGAACCAGCTAGCTTGTCCTGTGCCAGTTGCGGCAAGCCTGCCCATCTTCAGTGTCCCAAATGTGTGCAATTAAAGCTCCCTCGCGAAGCTGCTGCTTTCTGCACTCAGGATTGTTTTAAGGCTTCTTGGAACTCTCACAAATCCGTGCATCTAAAAGCCAAGTCGTCTGAAGCTGGGTCGGGTACTCCAGAGGAAGAAGGCTGGCTATATTGCTTGAGGAAAGGACAAGCTCGAACAGCAAAGCTTCCGTATTTTGATTGGACTGGGGCACTGAGGCCGTATCCTATATCTAGTAAGCGTATAGTACCTGCTCATATTGATCTGCCTGATTGGGCATCCGATGGGATTCCAAAAGCTGAGCCCAATAGTGATCTGCAGCGCGTTGTTGAGATCAAGACGGCGGATCAAATTGAGAGAATGCGAGAAACTTGTCGAATTGCAAGGGAGGTTTTAGATGCCGCTGCTCGTGTAATACGGCCTGGTATCACAACAGATGAAATTGATCAGGTGGTCCATGAGGCTACTATTGCTGCTGGTGGATATCCATCTCCTCTCAACTACCATTTTTTCCCCAAGTCTTGCTGCACGTCAGTCAATGAAGTAATTTGCCATGGTATTCCTGATGCCAGGAAATTAGAGGATGGTGATATAATCAATGTTGATGTGACTGTGTATTATAAAGGCGTCCATGGTGATTTAAATGAAACATACTTTGTGGGAAATGTTGATGAAGAGTCTCAACGGCTAGTCCAATCTACTTATGAGAGCATGGAGAAAGCAATATCCATCGTAAAACCTGGAATGCGATTCCGTGAAGTTGGTGAAGTCATTAATCGCCATGTAACTATGTCGGGATTCTCTGTGGTGAAATCAATTTGTGGTCATGGTATTGGGGAGCTTTTTCATTGTGCACCAAATATTCCCCATTACACAAGAAACAAAGCAGTTGGTGTAATGAAAGCTGGACAGACTTTTACAATTGAACCCATGATAAATGCAGGGGTTTGGCGTGATCGGATGTGGCCTGATGGATGGACAGCTGTTACAGCAGATGGCCAGCGCAGTGCACAGTTTGAGCACACACTTCTGGTGACAGAGACTGGAGTTGAAGTTCTTACAGCTCGGTTGCCATCATCACCCAAAGTGTTCCCTTGGTTAAATGCTTAA

Protein Analysis

396

Amino Acids

43.5

Weight (kDa)

6.36

Isoelectric Point (pI)

39.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C6H2 PF15801 15 - 58 3.7e-14 zf-MYND-like zinc finger, mRNA-binding
Peptidase_M24 PF00557 145 - 373 2.2e-54 Metallopeptidase family M24
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 699
Acc36I ACCTGC 1 cut(s) 337
AccII CGCG 2 cut(s) 105, 402
AciI CCGC 3 cut(s) 51, 422, 480
AclWI GGATC 1 cut(s) 432
AcoI YGGCCR 1 cut(s) 1075
AcuI CTGAAG 2 cut(s) 53, 210
AcyI GRCGYC 1 cut(s) 705
AfaI GTAC 2 cut(s) 205, 327
AgsI TTSAA 2 cut(s) 1004, 1130
AjiI CACGTC 1 cut(s) 609
AjnI CCWGG 3 cut(s) 499, 647, 817
AloI GAACNNNNNNTCC 2 cut(s) 1116, 1148
Alw21I GWGCWC 3 cut(s) 934, 1090, 1101
Alw26I GTCTC 2 cut(s) 762, 1112
Alw44I GTGCAC 2 cut(s) 930, 1086
AlwI GGATC 1 cut(s) 432
AlwNI CAGNNNCTG 1 cut(s) 1121
AoxI GGCC 4 cut(s) 296, 497, 1043, 1075
ApaLI GTGCAC 2 cut(s) 930, 1086
ApeKI GCWGC 6 cut(s) 110, 113, 397, 482, 551, 603
AseI ATTAAT 1 cut(s) 852
AspLEI GCGC 2 cut(s) 402, 1083
AspS9I GGNCC 1 cut(s) 532
AsuHPI GGTGA 7 cut(s) 23, 677, 725, 854, 898, 1123, 1149
AsuNHI GCTAGC 1 cut(s) 29
AvaII GGWCC 1 cut(s) 532
BaeGI GKGCMC 3 cut(s) 292, 934, 1090
BalI TGGCCA 1 cut(s) 1077
BanII GRGCYC 1 cut(s) 384
BauI CACGAG 1 cut(s) 486
Bbv12I GWGCWC 3 cut(s) 934, 1090, 1101
BbvI GCAGC 6 cut(s) 97, 100, 409, 469, 538, 590
BccI CCATC 9 cut(s) 72, 356, 574, 656, 815, 1043, 1047, 1067, 1159
BceAI ACGGC 4 cut(s) 283, 435, 512, 779
BcgI CGANNNNNNTGC 2 cut(s) 95, 129
BciT130I CCWGG 3 cut(s) 501, 649, 819
BciVI GTATCC 1 cut(s) 312
BclI TGATCA 1 cut(s) 523
BcoDI GTCTC 2 cut(s) 762, 1112
BfaI CTAG 3 cut(s) 30, 312, 767
BfmI CTRYAG 1 cut(s) 395
BfuAI ACCTGC 1 cut(s) 337
BfuI GTATCC 1 cut(s) 312
BisI GCNGC 8 cut(s) 52, 111, 114, 398, 480, 483, 552, 604
BlpI GCTNAGC 1 cut(s) 378
BlsI GCNGC 8 cut(s) 53, 112, 115, 399, 481, 484, 553, 605
Bme1390I CCNGG 3 cut(s) 501, 649, 819
Bme18I GGWCC 1 cut(s) 532
BmgBI CACGTC 1 cut(s) 609
BmgT120I GGNCC 1 cut(s) 532
BmrFI CCNGG 3 cut(s) 501, 649, 819
BmrI ACTGGG 1 cut(s) 294
BmsI GCATC 4 cut(s) 178, 365, 466, 634
BmtI GCTAGC 1 cut(s) 33
BmuI ACTGGG 1 cut(s) 294
BpmI CTGGAG 2 cut(s) 192, 1143
Bpu1102I GCTNAGC 1 cut(s) 378
BpuEI CTTGAG 1 cut(s) 256
BsaBI GATNNNNATC 1 cut(s) 565
BsaHI GRCGYC 1 cut(s) 705
BsaJI CCNNGG 3 cut(s) 631, 709, 1172
BsaXI ACNNNNNCTCC 2 cut(s) 1116, 1146
Bse1I ACTGG 3 cut(s) 45, 289, 1126
Bse8I GATNNNNATC 1 cut(s) 565
BseBI CCWGG 3 cut(s) 501, 649, 819
BseDI CCNNGG 3 cut(s) 631, 709, 1172
BseGI GGATG 4 cut(s) 356, 667, 1044, 1058
BseJI GATNNNNATC 1 cut(s) 565
BseMII CTCAG 3 cut(s) 140, 284, 369
BseNI ACTGG 3 cut(s) 45, 289, 1126
BseRI GAGGAG 1 cut(s) 561
BseSI GKGCMC 3 cut(s) 292, 934, 1090
BseXI GCAGC 6 cut(s) 97, 100, 409, 469, 538, 590
BseYI CCCAGC 1 cut(s) 194
BsgI GTGCAG 2 cut(s) 106, 589
Bsh1236I CGCG 2 cut(s) 105, 402
BshFI GGCC 4 cut(s) 298, 499, 1045, 1077
BsiHKAI GWGCWC 3 cut(s) 934, 1090, 1101
BslFI GGGAC 1 cut(s) 60
BsmAI GTCTC 2 cut(s) 762, 1112
BsmFI GGGAC 1 cut(s) 60
BsmI GAATGC 2 cut(s) 444, 828
BsnI GGCC 4 cut(s) 298, 499, 1045, 1077
Bsp1286I GDGCHC 5 cut(s) 292, 384, 934, 1090, 1101
Bsp143I GATC 6 cut(s) 340, 391, 411, 424, 523, 1033
Bsp1720I GCTNAGC 1 cut(s) 378
Bsp19I CCATGG 2 cut(s) 631, 709
Bsp68I TCGCGA 1 cut(s) 105
BspACI CCGC 3 cut(s) 51, 422, 480
BspANI GGCC 4 cut(s) 298, 499, 1045, 1077
BspCNI CTCAG 3 cut(s) 139, 285, 370
BspFNI CGCG 2 cut(s) 105, 402
BspMAI CTGCAG 1 cut(s) 399
BspMI ACCTGC 1 cut(s) 337
BspOI GCTAGC 1 cut(s) 33
BspPI GGATC 1 cut(s) 432
BsrI ACTGG 3 cut(s) 45, 289, 1126
BssECI CCNNGG 3 cut(s) 631, 709, 1172
BssMI GATC 6 cut(s) 340, 391, 411, 424, 523, 1033
BssNI GRCGYC 1 cut(s) 705
BssSI CACGAG 1 cut(s) 486
BssT1I CCWWGG 3 cut(s) 631, 709, 1172
Bst2BI CACGAG 1 cut(s) 486
Bst2UI CCWGG 3 cut(s) 501, 649, 819
Bst4CI ACNGT 2 cut(s) 691, 1092
Bst6I CTCTTC 1 cut(s) 747
BstACI GRCGYC 1 cut(s) 705
BstC8I GCNNGC 5 cut(s) 31, 56, 60, 224, 1079
BstDEI CTNAG 3 cut(s) 126, 293, 378
BstDSI CCRYGG 2 cut(s) 631, 709
BstF5I GGATG 4 cut(s) 356, 667, 1044, 1058
BstFNI CGCG 2 cut(s) 105, 402
BstHHI GCGC 2 cut(s) 402, 1083
BstKTI GATC 6 cut(s) 343, 394, 414, 427, 526, 1036
BstMAI GTCTC 2 cut(s) 762, 1112
BstMBI GATC 6 cut(s) 340, 391, 411, 424, 523, 1033
BstMWI GCNNNNNNNGC 5 cut(s) 26, 94, 257, 548, 1067
BstNI CCWGG 3 cut(s) 501, 649, 819
BstSCI CCNGG 3 cut(s) 499, 647, 817
BstSFI CTRYAG 1 cut(s) 395
BstSLI GKGCMC 3 cut(s) 292, 934, 1090
BstUI CGCG 2 cut(s) 105, 402
BstV1I GCAGC 6 cut(s) 97, 100, 409, 469, 538, 590
BsuI GTATCC 1 cut(s) 312
BsuRI GGCC 4 cut(s) 298, 499, 1045, 1077
BtgI CCRYGG 2 cut(s) 631, 709
BtrI CACGTC 1 cut(s) 609
BtsCI GGATG 4 cut(s) 356, 667, 1044, 1058
BtsI GCAGTG 1 cut(s) 1090
BtsIMutI CAGTG 3 cut(s) 77, 290, 1090
BtuMI TCGCGA 1 cut(s) 105
BveI ACCTGC 1 cut(s) 337
Cac8I GCNNGC 5 cut(s) 31, 56, 60, 224, 1079
CaiI CAGNNNCTG 1 cut(s) 1121
CfoI GCGC 2 cut(s) 402, 1083
Cfr13I GGNCC 1 cut(s) 532
CseI GACGC 1 cut(s) 694
Csp6I GTAC 2 cut(s) 204, 326
CviAII CATG 7 cut(s) 536, 632, 710, 790, 860, 905, 1009
CviQI GTAC 2 cut(s) 204, 326
DdeI CTNAG 3 cut(s) 126, 293, 378
DpnI GATC 6 cut(s) 342, 393, 413, 426, 525, 1035
DpnII GATC 6 cut(s) 340, 391, 411, 424, 523, 1033
DraI TTTAAA 1 cut(s) 720
EaeI YGGCCR 1 cut(s) 1075
Eam1104I CTCTTC 1 cut(s) 747
EarI CTCTTC 1 cut(s) 747
EciI GGCGGA 1 cut(s) 437
Eco130I CCWWGG 3 cut(s) 631, 709, 1172
Eco24I GRGCYC 1 cut(s) 384
Eco32I GATATC 1 cut(s) 563
Eco47I GGWCC 1 cut(s) 532
Eco57I CTGAAG 2 cut(s) 53, 210
EcoRII CCWGG 3 cut(s) 499, 647, 817
EcoRV GATATC 1 cut(s) 563
EcoT14I CCWWGG 3 cut(s) 631, 709, 1172
EcoT38I GRGCYC 1 cut(s) 384
ErhI CCWWGG 3 cut(s) 631, 709, 1172
FaeI CATG 7 cut(s) 539, 635, 713, 793, 863, 908, 1012
FaqI GGGAC 1 cut(s) 60
FatI CATG 7 cut(s) 535, 631, 709, 789, 859, 904, 1008
FbaI TGATCA 1 cut(s) 523
Fnu4HI GCNGC 8 cut(s) 52, 111, 114, 398, 480, 483, 552, 604
FokI GGATG 4 cut(s) 343, 674, 1051, 1065
FriOI GRGCYC 1 cut(s) 384
Fsp4HI GCNGC 8 cut(s) 52, 111, 114, 398, 480, 483, 552, 604
FspBI CTAG 3 cut(s) 30, 312, 767
GlaI GCGC 2 cut(s) 401, 1082
GluI GCNGC 8 cut(s) 52, 111, 114, 398, 480, 483, 552, 604
GsaI CCCAGC 1 cut(s) 198
GsuI CTGGAG 2 cut(s) 192, 1143
HaeIII GGCC 4 cut(s) 298, 499, 1045, 1077
HgaI GACGC 1 cut(s) 694
HhaI GCGC 2 cut(s) 402, 1083
Hin1I GRCGYC 1 cut(s) 705
Hin1II CATG 7 cut(s) 539, 635, 713, 793, 863, 908, 1012
Hin6I GCGC 2 cut(s) 400, 1081
HinP1I GCGC 2 cut(s) 400, 1081
HindIII AAGCTT 1 cut(s) 263
HinfI GANTC 4 cut(s) 367, 755, 828, 876
HphI GGTGA 7 cut(s) 23, 677, 725, 854, 898, 1123, 1149
Hpy166II GTNNAC 2 cut(s) 932, 1088
Hpy188I TCNGA 3 cut(s) 190, 361, 1038
Hpy188III TCNNGA 6 cut(s) 104, 128, 209, 415, 641, 873
Hpy8I GTNNAC 2 cut(s) 932, 1088
HpyAV CCTTC 1 cut(s) 212
HpyCH4III ACNGT 2 cut(s) 691, 1092
HpyCH4IV ACGT 1 cut(s) 608
HpyCH4V TGCA 9 cut(s) 88, 123, 169, 397, 461, 606, 932, 1019, 1088
HpyF10VI GCNNNNNNNGC 5 cut(s) 26, 94, 257, 548, 1067
HpyF3I CTNAG 3 cut(s) 126, 293, 378
HpySE526I ACGT 1 cut(s) 608
Hsp92I GRCGYC 1 cut(s) 705
Hsp92II CATG 7 cut(s) 539, 635, 713, 793, 863, 908, 1012
HspAI GCGC 2 cut(s) 400, 1081
Ksp22I TGATCA 1 cut(s) 523
Kzo9I GATC 6 cut(s) 340, 391, 411, 424, 523, 1033
LmnI GCTCC 2 cut(s) 102, 916
Lsp1109I GCAGC 6 cut(s) 97, 100, 409, 469, 538, 590
LweI GCATC 4 cut(s) 178, 365, 466, 634
MaeI CTAG 3 cut(s) 30, 312, 767
MaeII ACGT 1 cut(s) 608
MaeIII GTNAC 4 cut(s) 685, 862, 1063, 1111
MalI GATC 6 cut(s) 342, 393, 413, 426, 525, 1035
MboI GATC 6 cut(s) 340, 391, 411, 424, 523, 1033
MboII GAAGA 3 cut(s) 59, 227, 764
MfeI CAATTG 1 cut(s) 999
MhlI GDGCHC 5 cut(s) 292, 384, 934, 1090, 1101
MlsI TGGCCA 1 cut(s) 1077
MluCI AATT 8 cut(s) 89, 429, 456, 519, 624, 653, 894, 999
MluNI TGGCCA 1 cut(s) 1077
MlyI GAGTC 1 cut(s) 764
MnlI CCTC 8 cut(s) 111, 205, 231, 288, 460, 532, 582, 652
Mox20I TGGCCA 1 cut(s) 1077
MscI TGGCCA 1 cut(s) 1077
MseI TTAA 6 cut(s) 92, 138, 719, 852, 1178, 1186
Msp20I TGGCCA 1 cut(s) 1077
MspA1I CMGCKG 2 cut(s) 482, 1061
MspR9I CCNGG 3 cut(s) 501, 649, 819
MunI CAATTG 1 cut(s) 999
Mva1269I GAATGC 2 cut(s) 444, 828
MvaI CCWGG 3 cut(s) 501, 649, 819
MvnI CGCG 2 cut(s) 105, 402
MwoI GCNNNNNNNGC 5 cut(s) 26, 94, 257, 548, 1067
NcoI CCATGG 2 cut(s) 631, 709
NdeII GATC 6 cut(s) 340, 391, 411, 424, 523, 1033
NheI GCTAGC 1 cut(s) 29
NlaIII CATG 7 cut(s) 539, 635, 713, 793, 863, 908, 1012
NmuCI GTSAC 2 cut(s) 685, 1111
NruI TCGCGA 1 cut(s) 105
PctI GAATGC 2 cut(s) 444, 828
PfeI GAWTC 3 cut(s) 367, 828, 876
PkrI GCNGC 8 cut(s) 53, 112, 115, 399, 481, 484, 553, 605
PleI GAGTC 1 cut(s) 763
PpsI GAGTC 1 cut(s) 763
PshBI ATTAAT 1 cut(s) 852
PsiI TTATAA 1 cut(s) 699
Psp6I CCWGG 3 cut(s) 499, 647, 817
PspFI CCCAGC 1 cut(s) 194
PspGI CCWGG 3 cut(s) 499, 647, 817
PspPI GGNCC 1 cut(s) 532
PstI CTGCAG 1 cut(s) 399
PstNI CAGNNNCTG 1 cut(s) 1121
PvuII CAGCTG 1 cut(s) 1061
RruI TCGCGA 1 cut(s) 105
RsaI GTAC 2 cut(s) 205, 327
RsaNI GTAC 2 cut(s) 204, 326
SaqAI TTAA 6 cut(s) 92, 138, 719, 852, 1178, 1186
SatI GCNGC 8 cut(s) 52, 111, 114, 398, 480, 483, 552, 604
Sau3AI GATC 6 cut(s) 340, 391, 411, 424, 523, 1033
Sau96I GGNCC 1 cut(s) 532
SchI GAGTC 1 cut(s) 764
ScrFI CCNGG 3 cut(s) 501, 649, 819
SduI GDGCHC 5 cut(s) 292, 384, 934, 1090, 1101
SfaNI GCATC 4 cut(s) 178, 365, 466, 634
SfcI CTRYAG 1 cut(s) 395
SinI GGWCC 1 cut(s) 532
SmiI ATTTAAAT 1 cut(s) 720
SmlI CTYRAG 1 cut(s) 235
SmoI CTYRAG 1 cut(s) 235
Sse9I AATT 8 cut(s) 89, 429, 456, 519, 624, 653, 894, 999
SsiI CCGC 3 cut(s) 51, 422, 480
SspI AATATT 1 cut(s) 940
SspMI CTAG 3 cut(s) 30, 312, 767
StyD4I CCNGG 3 cut(s) 499, 647, 817
StyI CCWWGG 3 cut(s) 631, 709, 1172
SwaI ATTTAAAT 1 cut(s) 720
TaaI ACNGT 2 cut(s) 691, 1092
TaiI ACGT 1 cut(s) 611
TaqI TCGA 2 cut(s) 253, 454
TasI AATT 8 cut(s) 89, 429, 456, 519, 624, 653, 894, 999
TauI GCSGC 2 cut(s) 54, 482
TfiI GAWTC 3 cut(s) 367, 828, 876
Tru1I TTAA 6 cut(s) 92, 138, 719, 852, 1178, 1186
Tru9I TTAA 6 cut(s) 92, 138, 719, 852, 1178, 1186
TscAI CASTG 3 cut(s) 77, 297, 1090
TseFI GTSAC 2 cut(s) 685, 1111
TseI GCWGC 6 cut(s) 110, 113, 397, 482, 551, 603
Tsp45I GTSAC 2 cut(s) 685, 1111
TspDTI ATGAA 6 cut(s) 531, 633, 738, 765, 914, 992
TspGWI ACGGA 3 cut(s) 154, 258, 821
TspRI CASTG 3 cut(s) 77, 297, 1090
VneI GTGCAC 2 cut(s) 930, 1086
VpaK11BI GGWCC 1 cut(s) 532
VspI ATTAAT 1 cut(s) 852
XspI CTAG 3 cut(s) 30, 312, 767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.