MD07G1118600.v1.1

Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val)

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Forward (+)
14712209 .. 14717279
5071 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1118600.v1.1.491

Sequence Viewer

Length: 1191 bp
ATGGCAGGTGGTTCAGATGTCGCCGAACCAGCTAGCTTGTCCTGTGCCAGTTGCGGCAAGCCGGCCCATCTTCAGTGTCCCAAATGTGTGCAATTAAAGCTCCCTCGCGAAGCTGCTGCTTTCTGCACTCAGGATTGTTTTAAGGCTTCTTGGAACTCTCACAAATCCGTGCATCTAAAAGCCAAGTCGTCTGAAGCTGGGTCGGGTACTCCAGAGGAAGAAGGCTGGCTATATTGCTTGAGGAAAGGACAAGCTCGAACAGCAAAGCTTCCGTATTTTGATTGGACTGGGGCACTGAGGCCGTATCCTATATCTAGTAAGCGTATAGTACCTGCTCATATTGATCTGCCTGATTGGGCATCCGATGGGATTCCAAAAGCTGAGCCCAATAGTGATCTGCAGCGCGTTGTTGAGATCAAGACGGCGGATCAAATTGAGAGAATGCGAGAAACTTGTCGAATTGCAAGGGAGGTTTTAGATGCCGCTGCTCGTGTAATACGGCCTGGTATCACAACAGATGAAATTGATCGGGTGGTCCATGAGGCTACTATTGCTGCTGGTGGATATCCATCTCCTCTCAACTACCATTTTTTCCCCAAGTCTTGCTGCACGTCAGTCAATGAAGTAATTTGCCATGGTATTCCTGATGCCAGGAAATTAGAGGATGGTGATATAATCAATGTTGATGTGACTGTGTATTATAAAGGCGTCCATGGTGATTTAAATGAAACATACTTTGTGGGAAATGTTGATGAAGAGTCTCAACGGCTAGTCCAATCTACTTATGAGAGCATGGAGAAAGCAATATCCATCGTAAAACCTGGAATGCGATTCCGTGAAGTCGGTGAAGTCATTAATCGCCATGTAACAATGTCGGGATTCTCTGTGGTGAAATCATATTGTGGTCATGGTATTGGGGAGCTTTTTCATTGTGCACCAAATATTCCCCATTACACAAGAAACAAAGCAGTTGGTGTAATGAAAGCTGGACAGACTTTTACAATTGAACCCATGATAAATGCAGGGGTTTGGCGTGATCGGATGTGGCCTGATGGATGGACAGTTGTTACAGCAGATGGCAAGCGCAGTGCACAGTTTGAGCACACACTTCTGGTGACAGAGACTGGAGTTGAAGTTCTTACAGCTCGGTTGCCATCATCACCCAAAGTATTCCCTTGGTTAAATGCTTAA

Protein Analysis

397

Amino Acids

43.69

Weight (kDa)

6.67

Isoelectric Point (pI)

39.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C6H2 PF15801 16 - 59 3.7e-14 zf-MYND-like zinc finger, mRNA-binding
Peptidase_M24 PF00557 146 - 374 8.3e-55 Metallopeptidase family M24
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 702
Acc36I ACCTGC 1 cut(s) 340
AccII CGCG 2 cut(s) 108, 405
AciI CCGC 3 cut(s) 54, 425, 483
AclWI GGATC 1 cut(s) 435
AcuI CTGAAG 2 cut(s) 56, 213
AcyI GRCGYC 1 cut(s) 708
AfaI GTAC 2 cut(s) 208, 330
AgsI TTSAA 2 cut(s) 1007, 1133
AjiI CACGTC 1 cut(s) 612
AjnI CCWGG 3 cut(s) 502, 650, 820
AloI GAACNNNNNNTCC 2 cut(s) 1119, 1151
Alw21I GWGCWC 3 cut(s) 937, 1093, 1104
Alw26I GTCTC 2 cut(s) 765, 1115
Alw44I GTGCAC 2 cut(s) 933, 1089
AlwI GGATC 1 cut(s) 435
AlwNI CAGNNNCTG 1 cut(s) 1124
AoxI GGCC 4 cut(s) 63, 299, 500, 1046
ApaLI GTGCAC 2 cut(s) 933, 1089
ApeKI GCWGC 6 cut(s) 113, 116, 400, 485, 554, 606
AseI ATTAAT 1 cut(s) 855
AspLEI GCGC 2 cut(s) 405, 1086
AspS9I GGNCC 2 cut(s) 64, 535
AsuHPI GGTGA 6 cut(s) 680, 728, 857, 901, 1126, 1152
AsuNHI GCTAGC 1 cut(s) 32
AvaII GGWCC 1 cut(s) 535
BaeGI GKGCMC 3 cut(s) 295, 937, 1093
BanII GRGCYC 1 cut(s) 387
BauI CACGAG 1 cut(s) 489
Bbv12I GWGCWC 3 cut(s) 937, 1093, 1104
BbvI GCAGC 6 cut(s) 100, 103, 412, 472, 541, 593
BccI CCATC 9 cut(s) 75, 359, 577, 659, 818, 1046, 1050, 1070, 1162
BceAI ACGGC 4 cut(s) 286, 438, 515, 782
BcgI CGANNNNNNTGC 2 cut(s) 98, 132
BciT130I CCWGG 3 cut(s) 504, 652, 822
BciVI GTATCC 1 cut(s) 315
BcoDI GTCTC 2 cut(s) 765, 1115
BfaI CTAG 3 cut(s) 33, 315, 770
BfmI CTRYAG 1 cut(s) 398
BfuAI ACCTGC 1 cut(s) 340
BfuI GTATCC 1 cut(s) 315
BisI GCNGC 8 cut(s) 55, 114, 117, 401, 483, 486, 555, 607
BlpI GCTNAGC 1 cut(s) 381
BlsI GCNGC 8 cut(s) 56, 115, 118, 402, 484, 487, 556, 608
Bme1390I CCNGG 3 cut(s) 504, 652, 822
Bme18I GGWCC 1 cut(s) 535
BmgBI CACGTC 1 cut(s) 612
BmgT120I GGNCC 2 cut(s) 64, 535
BmrFI CCNGG 3 cut(s) 504, 652, 822
BmrI ACTGGG 1 cut(s) 297
BmsI GCATC 4 cut(s) 181, 368, 469, 637
BmtI GCTAGC 1 cut(s) 36
BmuI ACTGGG 1 cut(s) 297
BpmI CTGGAG 2 cut(s) 195, 1146
Bpu1102I GCTNAGC 1 cut(s) 381
BpuEI CTTGAG 1 cut(s) 259
BsaBI GATNNNNATC 1 cut(s) 568
BsaHI GRCGYC 1 cut(s) 708
BsaJI CCNNGG 3 cut(s) 634, 712, 1175
BsaXI ACNNNNNCTCC 2 cut(s) 1119, 1149
Bse118I RCCGGY 1 cut(s) 61
Bse1I ACTGG 3 cut(s) 48, 292, 1129
Bse8I GATNNNNATC 1 cut(s) 568
BseBI CCWGG 3 cut(s) 504, 652, 822
BseDI CCNNGG 3 cut(s) 634, 712, 1175
BseGI GGATG 4 cut(s) 359, 670, 1047, 1061
BseJI GATNNNNATC 1 cut(s) 568
BseMII CTCAG 3 cut(s) 143, 287, 372
BseNI ACTGG 3 cut(s) 48, 292, 1129
BseRI GAGGAG 1 cut(s) 564
BseSI GKGCMC 3 cut(s) 295, 937, 1093
BseXI GCAGC 6 cut(s) 100, 103, 412, 472, 541, 593
BseYI CCCAGC 1 cut(s) 197
BsgI GTGCAG 2 cut(s) 109, 592
Bsh1236I CGCG 2 cut(s) 108, 405
BshFI GGCC 4 cut(s) 65, 301, 502, 1048
BsiHKAI GWGCWC 3 cut(s) 937, 1093, 1104
BsiSI CCGG 1 cut(s) 62
BslFI GGGAC 1 cut(s) 63
BsmAI GTCTC 2 cut(s) 765, 1115
BsmFI GGGAC 1 cut(s) 63
BsmI GAATGC 2 cut(s) 447, 831
BsnI GGCC 4 cut(s) 65, 301, 502, 1048
Bsp1286I GDGCHC 5 cut(s) 295, 387, 937, 1093, 1104
Bsp143I GATC 6 cut(s) 343, 394, 414, 427, 526, 1036
Bsp1720I GCTNAGC 1 cut(s) 381
Bsp19I CCATGG 2 cut(s) 634, 712
Bsp68I TCGCGA 1 cut(s) 108
BspACI CCGC 3 cut(s) 54, 425, 483
BspANI GGCC 4 cut(s) 65, 301, 502, 1048
BspCNI CTCAG 3 cut(s) 142, 288, 373
BspFNI CGCG 2 cut(s) 108, 405
BspMAI CTGCAG 1 cut(s) 402
BspMI ACCTGC 1 cut(s) 340
BspOI GCTAGC 1 cut(s) 36
BspPI GGATC 1 cut(s) 435
BsrFI RCCGGY 1 cut(s) 61
BsrI ACTGG 3 cut(s) 48, 292, 1129
BssAI RCCGGY 1 cut(s) 61
BssECI CCNNGG 3 cut(s) 634, 712, 1175
BssMI GATC 6 cut(s) 343, 394, 414, 427, 526, 1036
BssNI GRCGYC 1 cut(s) 708
BssSI CACGAG 1 cut(s) 489
BssT1I CCWWGG 3 cut(s) 634, 712, 1175
Bst2BI CACGAG 1 cut(s) 489
Bst2UI CCWGG 3 cut(s) 504, 652, 822
Bst4CI ACNGT 3 cut(s) 694, 1063, 1095
Bst6I CTCTTC 1 cut(s) 750
BstACI GRCGYC 1 cut(s) 708
BstC8I GCNNGC 5 cut(s) 34, 59, 63, 227, 1082
BstDEI CTNAG 3 cut(s) 129, 296, 381
BstDSI CCRYGG 2 cut(s) 634, 712
BstF5I GGATG 4 cut(s) 359, 670, 1047, 1061
BstFNI CGCG 2 cut(s) 108, 405
BstHHI GCGC 2 cut(s) 405, 1086
BstKTI GATC 6 cut(s) 346, 397, 417, 430, 529, 1039
BstMAI GTCTC 2 cut(s) 765, 1115
BstMBI GATC 6 cut(s) 343, 394, 414, 427, 526, 1036
BstMWI GCNNNNNNNGC 4 cut(s) 29, 97, 260, 551
BstNI CCWGG 3 cut(s) 504, 652, 822
BstSCI CCNGG 3 cut(s) 502, 650, 820
BstSFI CTRYAG 1 cut(s) 398
BstSLI GKGCMC 3 cut(s) 295, 937, 1093
BstUI CGCG 2 cut(s) 108, 405
BstV1I GCAGC 6 cut(s) 100, 103, 412, 472, 541, 593
BsuI GTATCC 1 cut(s) 315
BsuRI GGCC 4 cut(s) 65, 301, 502, 1048
BtgI CCRYGG 2 cut(s) 634, 712
BtrI CACGTC 1 cut(s) 612
BtsCI GGATG 4 cut(s) 359, 670, 1047, 1061
BtsI GCAGTG 1 cut(s) 1093
BtsIMutI CAGTG 3 cut(s) 80, 293, 1093
BtuMI TCGCGA 1 cut(s) 108
BveI ACCTGC 1 cut(s) 340
Cac8I GCNNGC 5 cut(s) 34, 59, 63, 227, 1082
CaiI CAGNNNCTG 1 cut(s) 1124
CfoI GCGC 2 cut(s) 405, 1086
Cfr10I RCCGGY 1 cut(s) 61
Cfr13I GGNCC 2 cut(s) 64, 535
CseI GACGC 1 cut(s) 697
Csp6I GTAC 2 cut(s) 207, 329
CviAII CATG 7 cut(s) 539, 635, 713, 793, 863, 908, 1012
CviQI GTAC 2 cut(s) 207, 329
DdeI CTNAG 3 cut(s) 129, 296, 381
DpnI GATC 6 cut(s) 345, 396, 416, 429, 528, 1038
DpnII GATC 6 cut(s) 343, 394, 414, 427, 526, 1036
DraI TTTAAA 1 cut(s) 723
Eam1104I CTCTTC 1 cut(s) 750
EarI CTCTTC 1 cut(s) 750
EciI GGCGGA 1 cut(s) 440
Eco130I CCWWGG 3 cut(s) 634, 712, 1175
Eco24I GRGCYC 1 cut(s) 387
Eco32I GATATC 1 cut(s) 566
Eco47I GGWCC 1 cut(s) 535
Eco57I CTGAAG 2 cut(s) 56, 213
EcoRII CCWGG 3 cut(s) 502, 650, 820
EcoRV GATATC 1 cut(s) 566
EcoT14I CCWWGG 3 cut(s) 634, 712, 1175
EcoT38I GRGCYC 1 cut(s) 387
ErhI CCWWGG 3 cut(s) 634, 712, 1175
FaeI CATG 7 cut(s) 542, 638, 716, 796, 866, 911, 1015
FaqI GGGAC 1 cut(s) 63
FatI CATG 7 cut(s) 538, 634, 712, 792, 862, 907, 1011
Fnu4HI GCNGC 8 cut(s) 55, 114, 117, 401, 483, 486, 555, 607
FokI GGATG 4 cut(s) 346, 677, 1054, 1068
FriOI GRGCYC 1 cut(s) 387
Fsp4HI GCNGC 8 cut(s) 55, 114, 117, 401, 483, 486, 555, 607
FspBI CTAG 3 cut(s) 33, 315, 770
GlaI GCGC 2 cut(s) 404, 1085
GluI GCNGC 8 cut(s) 55, 114, 117, 401, 483, 486, 555, 607
GsaI CCCAGC 1 cut(s) 201
GsuI CTGGAG 2 cut(s) 195, 1146
HaeIII GGCC 4 cut(s) 65, 301, 502, 1048
HapII CCGG 1 cut(s) 62
HgaI GACGC 1 cut(s) 697
HhaI GCGC 2 cut(s) 405, 1086
Hin1I GRCGYC 1 cut(s) 708
Hin1II CATG 7 cut(s) 542, 638, 716, 796, 866, 911, 1015
Hin6I GCGC 2 cut(s) 403, 1084
HinP1I GCGC 2 cut(s) 403, 1084
HindIII AAGCTT 1 cut(s) 266
HinfI GANTC 4 cut(s) 370, 758, 831, 879
HpaII CCGG 1 cut(s) 62
HphI GGTGA 6 cut(s) 680, 728, 857, 901, 1126, 1152
Hpy166II GTNNAC 2 cut(s) 935, 1091
Hpy188I TCNGA 4 cut(s) 16, 193, 364, 1041
Hpy188III TCNNGA 6 cut(s) 107, 131, 212, 418, 644, 876
Hpy8I GTNNAC 2 cut(s) 935, 1091
HpyAV CCTTC 1 cut(s) 215
HpyCH4III ACNGT 3 cut(s) 694, 1063, 1095
HpyCH4IV ACGT 1 cut(s) 611
HpyCH4V TGCA 9 cut(s) 91, 126, 172, 400, 464, 609, 935, 1022, 1091
HpyF10VI GCNNNNNNNGC 4 cut(s) 29, 97, 260, 551
HpyF3I CTNAG 3 cut(s) 129, 296, 381
HpySE526I ACGT 1 cut(s) 611
Hsp92I GRCGYC 1 cut(s) 708
Hsp92II CATG 7 cut(s) 542, 638, 716, 796, 866, 911, 1015
HspAI GCGC 2 cut(s) 403, 1084
KroI GCCGGC 1 cut(s) 61
KroNI GCCGGC 1 cut(s) 63
Kzo9I GATC 6 cut(s) 343, 394, 414, 427, 526, 1036
LmnI GCTCC 2 cut(s) 105, 919
Lsp1109I GCAGC 6 cut(s) 100, 103, 412, 472, 541, 593
LweI GCATC 4 cut(s) 181, 368, 469, 637
MaeI CTAG 3 cut(s) 33, 315, 770
MaeII ACGT 1 cut(s) 611
MaeIII GTNAC 4 cut(s) 688, 865, 1066, 1114
MalI GATC 6 cut(s) 345, 396, 416, 429, 528, 1038
MboI GATC 6 cut(s) 343, 394, 414, 427, 526, 1036
MboII GAAGA 3 cut(s) 62, 230, 767
MfeI CAATTG 1 cut(s) 1002
MhlI GDGCHC 5 cut(s) 295, 387, 937, 1093, 1104
MluCI AATT 7 cut(s) 92, 432, 459, 522, 627, 656, 1002
MlyI GAGTC 1 cut(s) 767
MnlI CCTC 8 cut(s) 114, 208, 234, 291, 463, 535, 585, 655
MroNI GCCGGC 1 cut(s) 61
MseI TTAA 6 cut(s) 95, 141, 722, 855, 1181, 1189
MspA1I CMGCKG 1 cut(s) 485
MspI CCGG 1 cut(s) 62
MspR9I CCNGG 3 cut(s) 504, 652, 822
MunI CAATTG 1 cut(s) 1002
Mva1269I GAATGC 2 cut(s) 447, 831
MvaI CCWGG 3 cut(s) 504, 652, 822
MvnI CGCG 2 cut(s) 108, 405
MwoI GCNNNNNNNGC 4 cut(s) 29, 97, 260, 551
NaeI GCCGGC 1 cut(s) 63
NcoI CCATGG 2 cut(s) 634, 712
NdeII GATC 6 cut(s) 343, 394, 414, 427, 526, 1036
NgoMIV GCCGGC 1 cut(s) 61
NheI GCTAGC 1 cut(s) 32
NlaIII CATG 7 cut(s) 542, 638, 716, 796, 866, 911, 1015
NmuCI GTSAC 2 cut(s) 688, 1114
NruI TCGCGA 1 cut(s) 108
PctI GAATGC 2 cut(s) 447, 831
PdiI GCCGGC 1 cut(s) 63
PfeI GAWTC 3 cut(s) 370, 831, 879
PkrI GCNGC 8 cut(s) 56, 115, 118, 402, 484, 487, 556, 608
PleI GAGTC 1 cut(s) 766
PpsI GAGTC 1 cut(s) 766
PshBI ATTAAT 1 cut(s) 855
PsiI TTATAA 1 cut(s) 702
Psp6I CCWGG 3 cut(s) 502, 650, 820
PspFI CCCAGC 1 cut(s) 197
PspGI CCWGG 3 cut(s) 502, 650, 820
PspPI GGNCC 2 cut(s) 64, 535
PstI CTGCAG 1 cut(s) 402
PstNI CAGNNNCTG 1 cut(s) 1124
RruI TCGCGA 1 cut(s) 108
RsaI GTAC 2 cut(s) 208, 330
RsaNI GTAC 2 cut(s) 207, 329
SaqAI TTAA 6 cut(s) 95, 141, 722, 855, 1181, 1189
SatI GCNGC 8 cut(s) 55, 114, 117, 401, 483, 486, 555, 607
Sau3AI GATC 6 cut(s) 343, 394, 414, 427, 526, 1036
Sau96I GGNCC 2 cut(s) 64, 535
SchI GAGTC 1 cut(s) 767
ScrFI CCNGG 3 cut(s) 504, 652, 822
SduI GDGCHC 5 cut(s) 295, 387, 937, 1093, 1104
SfaNI GCATC 4 cut(s) 181, 368, 469, 637
SfcI CTRYAG 1 cut(s) 398
SinI GGWCC 1 cut(s) 535
SmiI ATTTAAAT 1 cut(s) 723
SmlI CTYRAG 1 cut(s) 238
SmoI CTYRAG 1 cut(s) 238
Sse9I AATT 7 cut(s) 92, 432, 459, 522, 627, 656, 1002
SsiI CCGC 3 cut(s) 54, 425, 483
SspI AATATT 1 cut(s) 943
SspMI CTAG 3 cut(s) 33, 315, 770
StyD4I CCNGG 3 cut(s) 502, 650, 820
StyI CCWWGG 3 cut(s) 634, 712, 1175
SwaI ATTTAAAT 1 cut(s) 723
TaaI ACNGT 3 cut(s) 694, 1063, 1095
TaiI ACGT 1 cut(s) 614
TaqI TCGA 2 cut(s) 256, 457
TasI AATT 7 cut(s) 92, 432, 459, 522, 627, 656, 1002
TauI GCSGC 2 cut(s) 57, 485
TfiI GAWTC 3 cut(s) 370, 831, 879
Tru1I TTAA 6 cut(s) 95, 141, 722, 855, 1181, 1189
Tru9I TTAA 6 cut(s) 95, 141, 722, 855, 1181, 1189
TscAI CASTG 3 cut(s) 80, 300, 1093
TseFI GTSAC 2 cut(s) 688, 1114
TseI GCWGC 6 cut(s) 113, 116, 400, 485, 554, 606
Tsp45I GTSAC 2 cut(s) 688, 1114
TspDTI ATGAA 6 cut(s) 534, 636, 741, 768, 917, 995
TspGWI ACGGA 3 cut(s) 157, 261, 824
TspRI CASTG 3 cut(s) 80, 300, 1093
VneI GTGCAC 2 cut(s) 933, 1089
VpaK11BI GGWCC 1 cut(s) 535
VspI ATTAAT 1 cut(s) 855
XspI CTAG 3 cut(s) 33, 315, 770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.