pycom07g10610

Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
10728579 .. 10735110
6532 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g10610.7

Sequence Viewer

Length: 1194 bp
ATGGCAGGTGGTTCAGATGTCGCCGAACCGGCTAGCTTGTCCTGTGCCAGTTGCGGCAAGCCTGCCCATCTTCAGTGTCCCAAATGTGTGCAATTAAAGCTCCCTCGCGAAGCTGCTGCTTTCTGCACTCAGGATTGTTTTAAGGCTTCTTGGAACTCTCACAAATCCGTGCATCTAAAAGCCAAGTCATCCGAAGCTGGGACGGGTACTCCAGAGGATGAAGGCTGGCTATATTGCTTGAGGAAAGGACAAGCTCGAACAGCAAAGCTTCCGTATTTTGATTGGACTGGGGCACTGAGGCCGTATCCTATATCTAGTAAGCGTATAGTACCTGCTCATATTGATCTGCCTGATTGGGCATCCGATGGGATTCCAAAAGCTGAGCCCAATAGTGATCTGCAGCGTGTTGTTGATATCAAGACGGCGATCGATCAAATTGAGAGAATGCGAGAAACTTGTCGAATTGCAAGGGAGGTTTTAGATGCCGCTGCTCGTGTAATACGGCCTGGTATCACAACAGATGAAATTGATCGGGTGGTCCATGAGGCTACTATTGCTGCTGGTGGATATCCATCTCCTCTCAACTACCATTTTTTCCCAAAGTCTTGCTGCACGTCAGTCAATGAAGTAATTTGCCATGGTATTCCTGATGCCAGGAAATTAGAGGACGGTGATATAATCAATGTTGATGTGACTGTGTATTATAAAGGCGTCCATGGTGATTTAAATGAAACATACTTTGTGGGAAATGTTGATGAAGAGTCTCAACGGCTAGTCCAATCTACTTATGAGAGCATGGAGAAAGCAATATCCATCGTAAAACCTGGTGTGCGATTCCGTGAAGTCGGTGAAGTCATTAATCGCCATGTAACTATGTCGGGATTCTCTGTGGTGAAGTCGTATTGCGGTCATGGTATTGGGGAGCTTTTTCATTGTGCACCAAATATTCCCCATTACACAAGAAACAAAGCAGTTGGTGTAATGAAAGCTGGACAGACTTTTACAATTGAACCCATGATAAATGCAGGGGTTTGGCGTGATCGGATGTGGCCTGATGGATGGACAGCTGTTACAGCAGATGGCAAGCGCAGTGCACAGTTTGAGCACACACTTCTGGTGACAGAGACTGGAGTTGAAGTTCTTACAGCTCGGTTGCCTTCATCACCCAAAGTGTTCCCTTGGTTAAATGCTTAA

Protein Analysis

398

Amino Acids

43.73

Weight (kDa)

6.67

Isoelectric Point (pI)

37.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 705
Acc36I ACCTGC 1 cut(s) 340
AccII CGCG 1 cut(s) 108
AciI CCGC 3 cut(s) 54, 486, 906
AcuI CTGAAG 1 cut(s) 56
AcyI GRCGYC 1 cut(s) 711
AfaI GTAC 2 cut(s) 208, 330
AfiI CCNNNNNNNGG 1 cut(s) 198
AgsI TTSAA 2 cut(s) 1010, 1136
AjiI CACGTC 1 cut(s) 615
AjnI CCWGG 3 cut(s) 505, 653, 823
AloI GAACNNNNNNTCC 2 cut(s) 1122, 1154
Alw21I GWGCWC 3 cut(s) 940, 1096, 1107
Alw26I GTCTC 2 cut(s) 768, 1118
Alw44I GTGCAC 2 cut(s) 936, 1092
AlwNI CAGNNNCTG 1 cut(s) 1127
AoxI GGCC 3 cut(s) 299, 503, 1049
ApaLI GTGCAC 2 cut(s) 936, 1092
ApeKI GCWGC 6 cut(s) 113, 116, 400, 488, 557, 609
AseI ATTAAT 1 cut(s) 858
AspLEI GCGC 1 cut(s) 1089
AspS9I GGNCC 1 cut(s) 538
AsuHPI GGTGA 6 cut(s) 683, 731, 860, 904, 1129, 1155
AsuNHI GCTAGC 1 cut(s) 32
AvaII GGWCC 1 cut(s) 538
BaeGI GKGCMC 3 cut(s) 295, 940, 1096
BanII GRGCYC 1 cut(s) 387
BauI CACGAG 1 cut(s) 492
Bbv12I GWGCWC 3 cut(s) 940, 1096, 1107
BbvI GCAGC 6 cut(s) 100, 103, 412, 475, 544, 596
BccI CCATC 7 cut(s) 75, 359, 580, 821, 1049, 1053, 1073
BceAI ACGGC 4 cut(s) 286, 438, 518, 785
BcgI CGANNNNNNTGC 2 cut(s) 98, 132
BciT130I CCWGG 3 cut(s) 507, 655, 825
BciVI GTATCC 1 cut(s) 315
BcoDI GTCTC 2 cut(s) 768, 1118
BfaI CTAG 3 cut(s) 33, 315, 773
BfmI CTRYAG 1 cut(s) 398
BfuAI ACCTGC 1 cut(s) 340
BfuI GTATCC 1 cut(s) 315
BglI GCCNNNNNGGC 1 cut(s) 29
BisI GCNGC 8 cut(s) 55, 114, 117, 401, 486, 489, 558, 610
BlpI GCTNAGC 1 cut(s) 381
BlsI GCNGC 8 cut(s) 56, 115, 118, 402, 487, 490, 559, 611
Bme1390I CCNGG 3 cut(s) 507, 655, 825
Bme18I GGWCC 1 cut(s) 538
BmgBI CACGTC 1 cut(s) 615
BmgT120I GGNCC 1 cut(s) 538
BmrFI CCNGG 3 cut(s) 507, 655, 825
BmrI ACTGGG 1 cut(s) 297
BmsI GCATC 4 cut(s) 181, 368, 472, 640
BmtI GCTAGC 1 cut(s) 36
BmuI ACTGGG 1 cut(s) 297
BpmI CTGGAG 2 cut(s) 195, 1149
Bpu1102I GCTNAGC 1 cut(s) 381
BpuEI CTTGAG 1 cut(s) 259
Bsa29I ATCGAT 1 cut(s) 429
BsaBI GATNNNNATC 1 cut(s) 571
BsaHI GRCGYC 1 cut(s) 711
BsaJI CCNNGG 3 cut(s) 637, 715, 1178
BsaXI ACNNNNNCTCC 4 cut(s) 193, 223, 1122, 1152
Bsc4I CCNNNNNNNGG 1 cut(s) 198
Bse118I RCCGGY 1 cut(s) 28
Bse1I ACTGG 3 cut(s) 48, 292, 1132
Bse8I GATNNNNATC 1 cut(s) 571
BseBI CCWGG 3 cut(s) 507, 655, 825
BseCI ATCGAT 1 cut(s) 429
BseDI CCNNGG 3 cut(s) 637, 715, 1178
BseGI GGATG 5 cut(s) 188, 223, 359, 1050, 1064
BseJI GATNNNNATC 1 cut(s) 571
BseLI CCNNNNNNNGG 1 cut(s) 198
BseMII CTCAG 3 cut(s) 143, 287, 372
BseNI ACTGG 3 cut(s) 48, 292, 1132
BseRI GAGGAG 1 cut(s) 567
BseSI GKGCMC 3 cut(s) 295, 940, 1096
BseXI GCAGC 6 cut(s) 100, 103, 412, 475, 544, 596
BseYI CCCAGC 1 cut(s) 197
BsgI GTGCAG 2 cut(s) 109, 595
Bsh1236I CGCG 1 cut(s) 108
Bsh1285I CGRYCG 1 cut(s) 429
BshFI GGCC 3 cut(s) 301, 505, 1051
BshVI ATCGAT 1 cut(s) 429
BsiEI CGRYCG 1 cut(s) 429
BsiHKAI GWGCWC 3 cut(s) 940, 1096, 1107
BsiSI CCGG 1 cut(s) 29
BslFI GGGAC 2 cut(s) 63, 214
BslI CCNNNNNNNGG 1 cut(s) 198
BsmAI GTCTC 2 cut(s) 768, 1118
BsmFI GGGAC 2 cut(s) 63, 214
BsmI GAATGC 1 cut(s) 450
BsnI GGCC 3 cut(s) 301, 505, 1051
Bsp1286I GDGCHC 5 cut(s) 295, 387, 940, 1096, 1107
Bsp143I GATC 6 cut(s) 343, 394, 426, 430, 529, 1039
Bsp1720I GCTNAGC 1 cut(s) 381
Bsp19I CCATGG 2 cut(s) 637, 715
Bsp68I TCGCGA 1 cut(s) 108
BspACI CCGC 3 cut(s) 54, 486, 906
BspANI GGCC 3 cut(s) 301, 505, 1051
BspCNI CTCAG 3 cut(s) 142, 288, 373
BspDI ATCGAT 1 cut(s) 429
BspFNI CGCG 1 cut(s) 108
BspMAI CTGCAG 1 cut(s) 402
BspMI ACCTGC 1 cut(s) 340
BspOI GCTAGC 1 cut(s) 36
BsrFI RCCGGY 1 cut(s) 28
BsrI ACTGG 3 cut(s) 48, 292, 1132
BssAI RCCGGY 1 cut(s) 28
BssECI CCNNGG 3 cut(s) 637, 715, 1178
BssMI GATC 6 cut(s) 343, 394, 426, 430, 529, 1039
BssNI GRCGYC 1 cut(s) 711
BssSI CACGAG 1 cut(s) 492
BssT1I CCWWGG 3 cut(s) 637, 715, 1178
Bst2BI CACGAG 1 cut(s) 492
Bst2UI CCWGG 3 cut(s) 507, 655, 825
Bst4CI ACNGT 3 cut(s) 671, 697, 1098
Bst6I CTCTTC 1 cut(s) 753
BstACI GRCGYC 1 cut(s) 711
BstC8I GCNNGC 5 cut(s) 34, 59, 63, 227, 1085
BstDEI CTNAG 3 cut(s) 129, 296, 381
BstDSI CCRYGG 2 cut(s) 637, 715
BstF5I GGATG 5 cut(s) 188, 223, 359, 1050, 1064
BstFNI CGCG 1 cut(s) 108
BstHHI GCGC 1 cut(s) 1089
BstKTI GATC 6 cut(s) 346, 397, 429, 433, 532, 1042
BstMAI GTCTC 2 cut(s) 768, 1118
BstMBI GATC 6 cut(s) 343, 394, 426, 430, 529, 1039
BstMCI CGRYCG 1 cut(s) 429
BstMWI GCNNNNNNNGC 5 cut(s) 29, 97, 260, 554, 1073
BstNI CCWGG 3 cut(s) 507, 655, 825
BstSCI CCNGG 3 cut(s) 505, 653, 823
BstSFI CTRYAG 1 cut(s) 398
BstSLI GKGCMC 3 cut(s) 295, 940, 1096
BstUI CGCG 1 cut(s) 108
BstV1I GCAGC 6 cut(s) 100, 103, 412, 475, 544, 596
Bsu15I ATCGAT 1 cut(s) 429
BsuI GTATCC 1 cut(s) 315
BsuRI GGCC 3 cut(s) 301, 505, 1051
BsuTUI ATCGAT 1 cut(s) 429
BtgI CCRYGG 2 cut(s) 637, 715
BtrI CACGTC 1 cut(s) 615
BtsCI GGATG 5 cut(s) 188, 223, 359, 1050, 1064
BtsI GCAGTG 1 cut(s) 1096
BtsIMutI CAGTG 3 cut(s) 80, 293, 1096
BtuMI TCGCGA 1 cut(s) 108
BveI ACCTGC 1 cut(s) 340
Cac8I GCNNGC 5 cut(s) 34, 59, 63, 227, 1085
CaiI CAGNNNCTG 1 cut(s) 1127
CfoI GCGC 1 cut(s) 1089
Cfr10I RCCGGY 1 cut(s) 28
Cfr13I GGNCC 1 cut(s) 538
ClaI ATCGAT 1 cut(s) 429
CseI GACGC 1 cut(s) 700
CsiI ACCWGGT 1 cut(s) 823
Csp6I GTAC 2 cut(s) 207, 329
CviAII CATG 7 cut(s) 542, 638, 716, 796, 866, 911, 1015
CviQI GTAC 2 cut(s) 207, 329
DdeI CTNAG 3 cut(s) 129, 296, 381
DpnI GATC 6 cut(s) 345, 396, 428, 432, 531, 1041
DpnII GATC 6 cut(s) 343, 394, 426, 430, 529, 1039
DraI TTTAAA 1 cut(s) 726
Eam1104I CTCTTC 1 cut(s) 753
EarI CTCTTC 1 cut(s) 753
Eco130I CCWWGG 3 cut(s) 637, 715, 1178
Eco24I GRGCYC 1 cut(s) 387
Eco32I GATATC 2 cut(s) 415, 569
Eco47I GGWCC 1 cut(s) 538
Eco57I CTGAAG 1 cut(s) 56
EcoRII CCWGG 3 cut(s) 505, 653, 823
EcoRV GATATC 2 cut(s) 415, 569
EcoT14I CCWWGG 3 cut(s) 637, 715, 1178
EcoT38I GRGCYC 1 cut(s) 387
ErhI CCWWGG 3 cut(s) 637, 715, 1178
FaeI CATG 7 cut(s) 545, 641, 719, 799, 869, 914, 1018
FaqI GGGAC 2 cut(s) 63, 214
FatI CATG 7 cut(s) 541, 637, 715, 795, 865, 910, 1014
Fnu4HI GCNGC 8 cut(s) 55, 114, 117, 401, 486, 489, 558, 610
FokI GGATG 5 cut(s) 175, 230, 346, 1057, 1071
FriOI GRGCYC 1 cut(s) 387
Fsp4HI GCNGC 8 cut(s) 55, 114, 117, 401, 486, 489, 558, 610
FspBI CTAG 3 cut(s) 33, 315, 773
GlaI GCGC 1 cut(s) 1088
GluI GCNGC 8 cut(s) 55, 114, 117, 401, 486, 489, 558, 610
GsaI CCCAGC 1 cut(s) 201
GsuI CTGGAG 2 cut(s) 195, 1149
HaeIII GGCC 3 cut(s) 301, 505, 1051
HapII CCGG 1 cut(s) 29
HgaI GACGC 1 cut(s) 700
HhaI GCGC 1 cut(s) 1089
Hin1I GRCGYC 1 cut(s) 711
Hin1II CATG 7 cut(s) 545, 641, 719, 799, 869, 914, 1018
Hin6I GCGC 1 cut(s) 1087
HinP1I GCGC 1 cut(s) 1087
HindIII AAGCTT 1 cut(s) 266
HinfI GANTC 4 cut(s) 370, 761, 834, 882
HpaII CCGG 1 cut(s) 29
HphI GGTGA 6 cut(s) 683, 731, 860, 904, 1129, 1155
Hpy166II GTNNAC 2 cut(s) 938, 1094
Hpy188I TCNGA 4 cut(s) 16, 193, 364, 1044
Hpy188III TCNNGA 6 cut(s) 107, 131, 212, 418, 647, 879
Hpy8I GTNNAC 2 cut(s) 938, 1094
HpyAV CCTTC 2 cut(s) 215, 1167
HpyCH4III ACNGT 3 cut(s) 671, 697, 1098
HpyCH4IV ACGT 1 cut(s) 614
HpyCH4V TGCA 9 cut(s) 91, 126, 172, 400, 467, 612, 938, 1025, 1094
HpyF10VI GCNNNNNNNGC 5 cut(s) 29, 97, 260, 554, 1073
HpyF3I CTNAG 3 cut(s) 129, 296, 381
HpySE526I ACGT 1 cut(s) 614
Hsp92I GRCGYC 1 cut(s) 711
Hsp92II CATG 7 cut(s) 545, 641, 719, 799, 869, 914, 1018
HspAI GCGC 1 cut(s) 1087
Kzo9I GATC 6 cut(s) 343, 394, 426, 430, 529, 1039
LmnI GCTCC 2 cut(s) 105, 922
Lsp1109I GCAGC 6 cut(s) 100, 103, 412, 475, 544, 596
LweI GCATC 4 cut(s) 181, 368, 472, 640
MabI ACCWGGT 1 cut(s) 823
MaeI CTAG 3 cut(s) 33, 315, 773
MaeII ACGT 1 cut(s) 614
MaeIII GTNAC 4 cut(s) 691, 868, 1069, 1117
MalI GATC 6 cut(s) 345, 396, 428, 432, 531, 1041
MboI GATC 6 cut(s) 343, 394, 426, 430, 529, 1039
MboII GAAGA 2 cut(s) 62, 770
MfeI CAATTG 1 cut(s) 1005
MhlI GDGCHC 5 cut(s) 295, 387, 940, 1096, 1107
MluCI AATT 7 cut(s) 92, 435, 462, 525, 630, 659, 1005
MlyI GAGTC 1 cut(s) 770
MnlI CCTC 8 cut(s) 114, 208, 234, 291, 466, 538, 588, 658
MseI TTAA 6 cut(s) 95, 141, 725, 858, 1184, 1192
MspA1I CMGCKG 2 cut(s) 488, 1067
MspI CCGG 1 cut(s) 29
MspR9I CCNGG 3 cut(s) 507, 655, 825
MunI CAATTG 1 cut(s) 1005
Mva1269I GAATGC 1 cut(s) 450
MvaI CCWGG 3 cut(s) 507, 655, 825
MvnI CGCG 1 cut(s) 108
MwoI GCNNNNNNNGC 5 cut(s) 29, 97, 260, 554, 1073
NcoI CCATGG 2 cut(s) 637, 715
NdeII GATC 6 cut(s) 343, 394, 426, 430, 529, 1039
NheI GCTAGC 1 cut(s) 32
NlaIII CATG 7 cut(s) 545, 641, 719, 799, 869, 914, 1018
NmuCI GTSAC 2 cut(s) 691, 1117
NruI TCGCGA 1 cut(s) 108
PctI GAATGC 1 cut(s) 450
PfeI GAWTC 3 cut(s) 370, 834, 882
PkrI GCNGC 8 cut(s) 56, 115, 118, 402, 487, 490, 559, 611
Ple19I CGATCG 1 cut(s) 429
PleI GAGTC 1 cut(s) 769
PpsI GAGTC 1 cut(s) 769
PshBI ATTAAT 1 cut(s) 858
PsiI TTATAA 1 cut(s) 705
Psp6I CCWGG 3 cut(s) 505, 653, 823
PspFI CCCAGC 1 cut(s) 197
PspGI CCWGG 3 cut(s) 505, 653, 823
PspPI GGNCC 1 cut(s) 538
PstI CTGCAG 1 cut(s) 402
PstNI CAGNNNCTG 1 cut(s) 1127
PvuI CGATCG 1 cut(s) 429
PvuII CAGCTG 1 cut(s) 1067
RruI TCGCGA 1 cut(s) 108
RsaI GTAC 2 cut(s) 208, 330
RsaNI GTAC 2 cut(s) 207, 329
SaqAI TTAA 6 cut(s) 95, 141, 725, 858, 1184, 1192
SatI GCNGC 8 cut(s) 55, 114, 117, 401, 486, 489, 558, 610
Sau3AI GATC 6 cut(s) 343, 394, 426, 430, 529, 1039
Sau96I GGNCC 1 cut(s) 538
SchI GAGTC 1 cut(s) 770
ScrFI CCNGG 3 cut(s) 507, 655, 825
SduI GDGCHC 5 cut(s) 295, 387, 940, 1096, 1107
SexAI ACCWGGT 1 cut(s) 823
SfaNI GCATC 4 cut(s) 181, 368, 472, 640
SfcI CTRYAG 1 cut(s) 398
SinI GGWCC 1 cut(s) 538
SmiI ATTTAAAT 1 cut(s) 726
SmlI CTYRAG 1 cut(s) 238
SmoI CTYRAG 1 cut(s) 238
Sse9I AATT 7 cut(s) 92, 435, 462, 525, 630, 659, 1005
SsiI CCGC 3 cut(s) 54, 486, 906
SspI AATATT 1 cut(s) 946
SspMI CTAG 3 cut(s) 33, 315, 773
StyD4I CCNGG 3 cut(s) 505, 653, 823
StyI CCWWGG 3 cut(s) 637, 715, 1178
SwaI ATTTAAAT 1 cut(s) 726
TaaI ACNGT 3 cut(s) 671, 697, 1098
TaiI ACGT 1 cut(s) 617
TaqI TCGA 3 cut(s) 256, 429, 460
TasI AATT 7 cut(s) 92, 435, 462, 525, 630, 659, 1005
TauI GCSGC 2 cut(s) 57, 488
TfiI GAWTC 3 cut(s) 370, 834, 882
Tru1I TTAA 6 cut(s) 95, 141, 725, 858, 1184, 1192
Tru9I TTAA 6 cut(s) 95, 141, 725, 858, 1184, 1192
TscAI CASTG 3 cut(s) 80, 300, 1096
TseFI GTSAC 2 cut(s) 691, 1117
TseI GCWGC 6 cut(s) 113, 116, 400, 488, 557, 609
Tsp45I GTSAC 2 cut(s) 691, 1117
TspDTI ATGAA 8 cut(s) 234, 537, 639, 744, 771, 920, 998, 1149
TspGWI ACGGA 3 cut(s) 157, 261, 827
TspRI CASTG 3 cut(s) 80, 300, 1096
VneI GTGCAC 2 cut(s) 936, 1092
VpaK11BI GGWCC 1 cut(s) 538
VspI ATTAAT 1 cut(s) 858
XspI CTAG 3 cut(s) 33, 315, 773
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.