Prupe.2G141300_v2.0.a1

Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
19758198 .. 19763991
5794 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G141300.1

Sequence Viewer

Length: 1191 bp
ATGGCCGGTGGTTCAGATGTGGCTGAACCAGCTAGCTTGTCCTGTGCTAGCTGCGGCAAACCTGCCCAGCTTCAGTGTCCCAAATGTGTGCAATTGAAGCTTCCTCGTGAAACGGCTGCTTTCTGCACTCAGGATTGTTTTAAGGCTTCTTGGAGCTCTCATAAGTCAGTGCATCTAAAGGCCAAGCCGTCCGAACCTGGGACAGGTACCCCAGATAATGAAGGTTGGCTATATTGCTTGAAGAAAGGACAGGCTCGAACACCAAAGCTTCCCTATTTTGATTGGACTGGGACACTGAGGCCGTATCCTATATCTAGTAAGCGTATGGTACCTGCTCATATTGATCTACCTGATTGGGCAGCTGATGGAACTCCAAAAGTTGAGCCCAATAGTGATCTGCAGCATGTTGTCGAGATCAAGAAACCGGAACAAATTGAGAGAATGCGAGAAACTTGTCTAATTGCAAGGAAGGTCTTGGATAAAGCTGCTAGTGTAATCCGACCTGGTATCACAACTGATGAAATTGATCGGGTGGTCCATGAGGCTACTATTGCTGAGGGTGGATATCCATCTCCTCTCAATTATCATTTCTTCCCCAAGTCTTGCTGCACGTCAGTCAATGAAGTAATTTGCCATGGGATTCCTGATGCCAGGAAATTAGAGGATGGTGATATCGTCAATGTTGATGTGACCGTGTATTATAAAGGCGTCCATGGTGATCTAAATGAAACATACTTTGTGGGAAATGTTGATGAAGAGTCTCAACGGCTAGTCCAATCTACTTATGAGTGCTTGGAGAAAGCAATATCTATTGTAAAACCTGGAATGCGATTTCGAGAAGTTGGTGAAGTCATTAATCGCCATGCGACAATGTCGGGATTCTCTGTGGTGAAATCATATTGCGGTCATGGTATTGGGGAGCTTTTTCATTGTGCACCAAATATTCCCCATTATGCAAGAAATAAAGCTGTTGGTGTGATGAAAGCTGGACAGACATTTACAATTGAACCTATGATCAATGCAGGGGTTTGGCGTGATCGGATGTGGCCCGATGGATGGACTGCTGTTACAGCAGATGGCAAGCGCAGTGCTCAGTTTGAGCACACACTTCTGGTGACAGAGACGGGAGTTGAAGTTCTTACAGCTCGGTTGCCTTCTTCACCCAAAGTGTTCCCTTGGTTAAATGCTTAA

Protein Analysis

397

Amino Acids

43.7

Weight (kDa)

6.88

Isoelectric Point (pI)

39.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 702
Acc36I ACCTGC 2 cut(s) 70, 340
Acc65I GGTACC 2 cut(s) 206, 328
AccB1I GGYRCC 2 cut(s) 206, 328
AciI CCGC 2 cut(s) 54, 903
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 1 cut(s) 56
AcyI GRCGYC 1 cut(s) 708
AfaI GTAC 2 cut(s) 208, 330
AfiI CCNNNNNNNGG 3 cut(s) 198, 203, 1056
AgsI TTSAA 4 cut(s) 97, 241, 1007, 1133
AjiI CACGTC 1 cut(s) 612
AjnI CCWGG 4 cut(s) 196, 502, 650, 820
AloI GAACNNNNNNTCC 2 cut(s) 1119, 1151
Alw21I GWGCWC 4 cut(s) 158, 937, 1093, 1104
Alw26I GTCTC 2 cut(s) 765, 1115
Alw44I GTGCAC 1 cut(s) 933
AoxI GGCC 4 cut(s) 3, 180, 299, 1046
ApaLI GTGCAC 1 cut(s) 933
ApeKI GCWGC 6 cut(s) 51, 116, 359, 400, 485, 606
AseI ATTAAT 1 cut(s) 855
Asp718I GGTACC 2 cut(s) 206, 328
AspLEI GCGC 1 cut(s) 1086
AspS9I GGNCC 2 cut(s) 535, 1047
AsuHPI GGTGA 6 cut(s) 680, 728, 857, 901, 1126, 1152
AsuNHI GCTAGC 2 cut(s) 32, 47
AvaII GGWCC 1 cut(s) 535
BaeGI GKGCMC 1 cut(s) 937
BanI GGYRCC 2 cut(s) 206, 328
BanII GRGCYC 2 cut(s) 158, 387
BauI CACGAG 1 cut(s) 105
Bbv12I GWGCWC 4 cut(s) 158, 937, 1093, 1104
BbvCI CCTCAGC 1 cut(s) 555
BbvI GCAGC 6 cut(s) 38, 103, 371, 412, 472, 593
BccI CCATC 6 cut(s) 359, 577, 659, 1046, 1050, 1070
BceAI ACGGC 4 cut(s) 129, 172, 286, 782
BciT130I CCWGG 4 cut(s) 198, 504, 652, 822
BciVI GTATCC 1 cut(s) 315
BclI TGATCA 1 cut(s) 1014
BcoDI GTCTC 2 cut(s) 765, 1115
BfaI CTAG 5 cut(s) 33, 48, 315, 489, 770
BfmI CTRYAG 1 cut(s) 398
BfuAI ACCTGC 2 cut(s) 70, 340
BfuI GTATCC 1 cut(s) 315
BisI GCNGC 7 cut(s) 52, 55, 117, 360, 401, 486, 607
BlsI GCNGC 7 cut(s) 53, 56, 118, 361, 402, 487, 608
Bme1390I CCNGG 4 cut(s) 198, 504, 652, 822
Bme18I GGWCC 1 cut(s) 535
BmgBI CACGTC 1 cut(s) 612
BmgT120I GGNCC 2 cut(s) 535, 1047
BmiI GGNNCC 2 cut(s) 208, 330
BmrFI CCNGG 4 cut(s) 198, 504, 652, 822
BmrI ACTGGG 1 cut(s) 297
BmsI GCATC 2 cut(s) 181, 637
BmtI GCTAGC 2 cut(s) 36, 51
BmuI ACTGGG 1 cut(s) 297
Bpu10I CCTNAGC 1 cut(s) 555
BsaBI GATNNNNATC 1 cut(s) 568
BsaHI GRCGYC 1 cut(s) 708
BsaJI CCNNGG 4 cut(s) 197, 634, 712, 1175
BsaWI WCCGGW 1 cut(s) 424
BsaXI ACNNNNNCTCC 2 cut(s) 1119, 1149
Bsc4I CCNNNNNNNGG 3 cut(s) 198, 203, 1056
Bse118I RCCGGY 1 cut(s) 5
Bse1I ACTGG 1 cut(s) 292
Bse8I GATNNNNATC 1 cut(s) 568
BseBI CCWGG 4 cut(s) 198, 504, 652, 822
BseDI CCNNGG 4 cut(s) 197, 634, 712, 1175
BseGI GGATG 3 cut(s) 670, 1047, 1061
BseJI GATNNNNATC 1 cut(s) 568
BseLI CCNNNNNNNGG 3 cut(s) 198, 203, 1056
BseMII CTCAG 4 cut(s) 143, 287, 546, 1106
BseNI ACTGG 1 cut(s) 292
BseRI GAGGAG 1 cut(s) 564
BseSI GKGCMC 1 cut(s) 937
BseXI GCAGC 6 cut(s) 38, 103, 371, 412, 472, 593
BseYI CCCAGC 1 cut(s) 66
BsgI GTGCAG 2 cut(s) 109, 592
BshFI GGCC 4 cut(s) 5, 182, 301, 1048
BshNI GGYRCC 2 cut(s) 206, 328
BsiHKAI GWGCWC 4 cut(s) 158, 937, 1093, 1104
BsiSI CCGG 2 cut(s) 6, 425
BslFI GGGAC 3 cut(s) 63, 214, 304
BslI CCNNNNNNNGG 3 cut(s) 198, 203, 1056
BsmAI GTCTC 2 cut(s) 765, 1115
BsmBI CGTCTC 1 cut(s) 1115
BsmFI GGGAC 3 cut(s) 63, 214, 304
BsmI GAATGC 2 cut(s) 447, 831
BsnI GGCC 4 cut(s) 5, 182, 301, 1048
Bsp1286I GDGCHC 5 cut(s) 158, 387, 937, 1093, 1104
Bsp143I GATC 7 cut(s) 343, 394, 414, 526, 718, 1014, 1036
Bsp19I CCATGG 2 cut(s) 634, 712
BspACI CCGC 2 cut(s) 54, 903
BspANI GGCC 4 cut(s) 5, 182, 301, 1048
BspCNI CTCAG 4 cut(s) 142, 288, 547, 1105
BspLI GGNNCC 2 cut(s) 208, 330
BspMAI CTGCAG 1 cut(s) 402
BspMI ACCTGC 2 cut(s) 70, 340
BspOI GCTAGC 2 cut(s) 36, 51
BspT107I GGYRCC 2 cut(s) 206, 328
BsrFI RCCGGY 1 cut(s) 5
BsrI ACTGG 1 cut(s) 292
BssAI RCCGGY 1 cut(s) 5
BssECI CCNNGG 4 cut(s) 197, 634, 712, 1175
BssMI GATC 7 cut(s) 343, 394, 414, 526, 718, 1014, 1036
BssNI GRCGYC 1 cut(s) 708
BssSI CACGAG 1 cut(s) 105
BssT1I CCWWGG 3 cut(s) 634, 712, 1175
Bst2BI CACGAG 1 cut(s) 105
Bst2UI CCWGG 4 cut(s) 198, 504, 652, 822
Bst4CI ACNGT 1 cut(s) 694
Bst6I CTCTTC 1 cut(s) 750
BstACI GRCGYC 1 cut(s) 708
BstC8I GCNNGC 3 cut(s) 34, 49, 1082
BstDEI CTNAG 4 cut(s) 129, 296, 555, 1092
BstDSI CCRYGG 2 cut(s) 634, 712
BstENI CCTNNNNNAGG 1 cut(s) 201
BstF5I GGATG 3 cut(s) 670, 1047, 1061
BstHHI GCGC 1 cut(s) 1086
BstKTI GATC 7 cut(s) 346, 397, 417, 529, 721, 1017, 1039
BstMAI GTCTC 2 cut(s) 765, 1115
BstMBI GATC 7 cut(s) 343, 394, 414, 526, 718, 1014, 1036
BstMWI GCNNNNNNNGC 4 cut(s) 29, 97, 551, 1070
BstNI CCWGG 4 cut(s) 198, 504, 652, 822
BstNSI RCATGY 1 cut(s) 407
BstSCI CCNGG 4 cut(s) 196, 502, 650, 820
BstSFI CTRYAG 1 cut(s) 398
BstSLI GKGCMC 1 cut(s) 937
BstV1I GCAGC 6 cut(s) 38, 103, 371, 412, 472, 593
BsuI GTATCC 1 cut(s) 315
BsuRI GGCC 4 cut(s) 5, 182, 301, 1048
BtgI CCRYGG 2 cut(s) 634, 712
BtrI CACGTC 1 cut(s) 612
BtsCI GGATG 3 cut(s) 670, 1047, 1061
BtsI GCAGTG 1 cut(s) 1093
BtsIMutI CAGTG 4 cut(s) 80, 174, 293, 1093
BveI ACCTGC 2 cut(s) 70, 340
Cac8I GCNNGC 3 cut(s) 34, 49, 1082
CfoI GCGC 1 cut(s) 1086
Cfr10I RCCGGY 1 cut(s) 5
Cfr13I GGNCC 2 cut(s) 535, 1047
CseI GACGC 1 cut(s) 697
CsiI ACCWGGT 1 cut(s) 502
Csp6I GTAC 2 cut(s) 207, 329
CviAII CATG 6 cut(s) 404, 539, 635, 713, 863, 908
CviQI GTAC 2 cut(s) 207, 329
DdeI CTNAG 4 cut(s) 129, 296, 555, 1092
DpnI GATC 7 cut(s) 345, 396, 416, 528, 720, 1016, 1038
DpnII GATC 7 cut(s) 343, 394, 414, 526, 718, 1014, 1036
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 750
EarI CTCTTC 1 cut(s) 750
Ecl136II GAGCTC 1 cut(s) 156
Eco130I CCWWGG 3 cut(s) 634, 712, 1175
Eco24I GRGCYC 2 cut(s) 158, 387
Eco32I GATATC 2 cut(s) 566, 673
Eco47I GGWCC 1 cut(s) 535
Eco53kI GAGCTC 1 cut(s) 156
Eco57I CTGAAG 1 cut(s) 56
EcoICRI GAGCTC 1 cut(s) 156
EcoNI CCTNNNNNAGG 1 cut(s) 201
EcoRII CCWGG 4 cut(s) 196, 502, 650, 820
EcoRV GATATC 2 cut(s) 566, 673
EcoT14I CCWWGG 3 cut(s) 634, 712, 1175
EcoT38I GRGCYC 2 cut(s) 158, 387
ErhI CCWWGG 3 cut(s) 634, 712, 1175
Esp3I CGTCTC 1 cut(s) 1115
FaeI CATG 6 cut(s) 407, 542, 638, 716, 866, 911
FaqI GGGAC 3 cut(s) 63, 214, 304
FatI CATG 6 cut(s) 403, 538, 634, 712, 862, 907
FbaI TGATCA 1 cut(s) 1014
Fnu4HI GCNGC 7 cut(s) 52, 55, 117, 360, 401, 486, 607
FokI GGATG 3 cut(s) 677, 1054, 1068
FriOI GRGCYC 2 cut(s) 158, 387
Fsp4HI GCNGC 7 cut(s) 52, 55, 117, 360, 401, 486, 607
FspBI CTAG 5 cut(s) 33, 48, 315, 489, 770
GlaI GCGC 1 cut(s) 1085
GluI GCNGC 7 cut(s) 52, 55, 117, 360, 401, 486, 607
GsaI CCCAGC 1 cut(s) 70
HaeIII GGCC 4 cut(s) 5, 182, 301, 1048
HapII CCGG 2 cut(s) 6, 425
HgaI GACGC 1 cut(s) 697
HhaI GCGC 1 cut(s) 1086
Hin1I GRCGYC 1 cut(s) 708
Hin1II CATG 6 cut(s) 407, 542, 638, 716, 866, 911
Hin6I GCGC 1 cut(s) 1084
HinP1I GCGC 1 cut(s) 1084
HindIII AAGCTT 2 cut(s) 98, 266
HinfI GANTC 3 cut(s) 640, 758, 879
HpaII CCGG 2 cut(s) 6, 425
HphI GGTGA 6 cut(s) 680, 728, 857, 901, 1126, 1152
Hpy166II GTNNAC 1 cut(s) 935
Hpy188I TCNGA 4 cut(s) 16, 193, 500, 1041
Hpy188III TCNNGA 7 cut(s) 107, 131, 412, 418, 644, 836, 876
Hpy8I GTNNAC 1 cut(s) 935
HpyAV CCTTC 3 cut(s) 215, 463, 1164
HpyCH4III ACNGT 1 cut(s) 694
HpyCH4IV ACGT 1 cut(s) 611
HpyCH4V TGCA 9 cut(s) 91, 126, 172, 400, 464, 609, 935, 956, 1022
HpyF10VI GCNNNNNNNGC 4 cut(s) 29, 97, 551, 1070
HpyF3I CTNAG 4 cut(s) 129, 296, 555, 1092
HpySE526I ACGT 1 cut(s) 611
Hsp92I GRCGYC 1 cut(s) 708
Hsp92II CATG 6 cut(s) 407, 542, 638, 716, 866, 911
HspAI GCGC 1 cut(s) 1084
KpnI GGTACC 2 cut(s) 210, 332
Ksp22I TGATCA 1 cut(s) 1014
Kzo9I GATC 7 cut(s) 343, 394, 414, 526, 718, 1014, 1036
LmnI GCTCC 2 cut(s) 153, 919
Lsp1109I GCAGC 6 cut(s) 38, 103, 371, 412, 472, 593
LweI GCATC 2 cut(s) 181, 637
MabI ACCWGGT 1 cut(s) 502
MaeI CTAG 5 cut(s) 33, 48, 315, 489, 770
MaeII ACGT 1 cut(s) 611
MaeIII GTNAC 3 cut(s) 688, 1066, 1114
MalI GATC 7 cut(s) 345, 396, 416, 528, 720, 1016, 1038
MboI GATC 7 cut(s) 343, 394, 414, 526, 718, 1014, 1036
MboII GAAGA 4 cut(s) 253, 583, 767, 1149
MfeI CAATTG 2 cut(s) 92, 1002
MhlI GDGCHC 5 cut(s) 158, 387, 937, 1093, 1104
MluCI AATT 8 cut(s) 92, 432, 459, 522, 580, 627, 656, 1002
MlyI GAGTC 1 cut(s) 767
MmeI TCCRAC 1 cut(s) 523
MnlI CCTC 6 cut(s) 114, 291, 535, 550, 585, 655
MseI TTAA 4 cut(s) 141, 855, 1181, 1189
MspA1I CMGCKG 1 cut(s) 362
MspI CCGG 2 cut(s) 6, 425
MspR9I CCNGG 4 cut(s) 198, 504, 652, 822
MunI CAATTG 2 cut(s) 92, 1002
Mva1269I GAATGC 2 cut(s) 447, 831
MvaI CCWGG 4 cut(s) 198, 504, 652, 822
MwoI GCNNNNNNNGC 4 cut(s) 29, 97, 551, 1070
NcoI CCATGG 2 cut(s) 634, 712
NdeII GATC 7 cut(s) 343, 394, 414, 526, 718, 1014, 1036
NheI GCTAGC 2 cut(s) 32, 47
NlaIII CATG 6 cut(s) 407, 542, 638, 716, 866, 911
NlaIV GGNNCC 2 cut(s) 208, 330
NmuCI GTSAC 2 cut(s) 688, 1114
NspI RCATGY 1 cut(s) 407
PctI GAATGC 2 cut(s) 447, 831
PfeI GAWTC 2 cut(s) 640, 879
PflFI GACNNNGTC 1 cut(s) 871
PkrI GCNGC 7 cut(s) 53, 56, 118, 361, 402, 487, 608
PleI GAGTC 1 cut(s) 766
PpsI GAGTC 1 cut(s) 766
PshBI ATTAAT 1 cut(s) 855
PsiI TTATAA 1 cut(s) 702
Psp124BI GAGCTC 1 cut(s) 158
Psp6I CCWGG 4 cut(s) 196, 502, 650, 820
PspFI CCCAGC 1 cut(s) 66
PspGI CCWGG 4 cut(s) 196, 502, 650, 820
PspN4I GGNNCC 2 cut(s) 208, 330
PspPI GGNCC 2 cut(s) 535, 1047
PstI CTGCAG 1 cut(s) 402
PsyI GACNNNGTC 1 cut(s) 871
PvuII CAGCTG 1 cut(s) 362
RsaI GTAC 2 cut(s) 208, 330
RsaNI GTAC 2 cut(s) 207, 329
SacI GAGCTC 1 cut(s) 158
SaqAI TTAA 4 cut(s) 141, 855, 1181, 1189
SatI GCNGC 7 cut(s) 52, 55, 117, 360, 401, 486, 607
Sau3AI GATC 7 cut(s) 343, 394, 414, 526, 718, 1014, 1036
Sau96I GGNCC 2 cut(s) 535, 1047
SchI GAGTC 1 cut(s) 767
ScrFI CCNGG 4 cut(s) 198, 504, 652, 822
SduI GDGCHC 5 cut(s) 158, 387, 937, 1093, 1104
SexAI ACCWGGT 1 cut(s) 502
SfaNI GCATC 2 cut(s) 181, 637
SfcI CTRYAG 1 cut(s) 398
SinI GGWCC 1 cut(s) 535
Sse9I AATT 8 cut(s) 92, 432, 459, 522, 580, 627, 656, 1002
SsiI CCGC 2 cut(s) 54, 903
SspI AATATT 1 cut(s) 943
SspMI CTAG 5 cut(s) 33, 48, 315, 489, 770
SstI GAGCTC 1 cut(s) 158
StyD4I CCNGG 4 cut(s) 196, 502, 650, 820
StyI CCWWGG 3 cut(s) 634, 712, 1175
TaaI ACNGT 1 cut(s) 694
TaiI ACGT 1 cut(s) 614
TaqI TCGA 3 cut(s) 256, 411, 835
TasI AATT 8 cut(s) 92, 432, 459, 522, 580, 627, 656, 1002
TauI GCSGC 1 cut(s) 57
TfiI GAWTC 2 cut(s) 640, 879
Tru1I TTAA 4 cut(s) 141, 855, 1181, 1189
Tru9I TTAA 4 cut(s) 141, 855, 1181, 1189
TscAI CASTG 4 cut(s) 80, 174, 300, 1093
TseFI GTSAC 2 cut(s) 688, 1114
TseI GCWGC 6 cut(s) 51, 116, 359, 400, 485, 606
Tsp45I GTSAC 2 cut(s) 688, 1114
TspDTI ATGAA 7 cut(s) 234, 534, 636, 741, 768, 917, 995
TspRI CASTG 4 cut(s) 80, 174, 300, 1093
Tth111I GACNNNGTC 1 cut(s) 871
VneI GTGCAC 1 cut(s) 933
VpaK11BI GGWCC 1 cut(s) 535
VspI ATTAAT 1 cut(s) 855
XagI CCTNNNNNAGG 1 cut(s) 201
XceI RCATGY 1 cut(s) 407
XspI CTAG 5 cut(s) 33, 48, 315, 489, 770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.