Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0012293.1

Orthogroup ID

OG0003129

Physical Location & Seq

Genomic Coordinates Reverse (-)

8893 .. 15168

Gene Structure 6276 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0012293.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2022 bp

atgaccatgatcggttacactcttggggattttcaggagattgacaagatcaggaagaagaccggcaagctttgcattcgggtggaggttctattgaaaaagccgctgccctttaagcggtggtactgggtggaggaagaggtcgagttcctgtgtaagttcaaatacgacaaattgtttgggcgttgctctacctgtggcttggttactcacgtcggtttgccttgctttgggccggcgctggaggaagatgaggaggggctagagaggactgtattgggggcacaccatgcagcggcaacgcttgggatggctagtggtttgcaactggttttggctactggtcaaaccttagtttttaagactcctattccaaatgaatctgctatgacgccggaaaggattacagggaagtgtatagctcattctgatgaaggggtgaatatatctccaaagaaactgaaacttagcttggcagtgggcaagcgcaacctgaatttggagctgaaaaaccttggcttggcctctatgccggtggacgatagttcgggtagtggcaaaagaaagcgaggacgtcttgtgggcagtaggaataaactgccatatggggagaagaaaaaagatgcagtgcttggtgaggttgtgaaagagaagaacgcttccaagaagggtaagggcaagaaggcatctgatgggacaagcttctatgcgtcatctatggcgtttctagtgtttggtttgtaccacaattgcgtgattgctaagaaatctccaactgatttccctctcaactcaaaccctagcccctcctcctcttgtctcacagctcgcctgaggctactgaatgcgatcatggccgacgtcgccaccctatcgtgtgctcgttgcagcaaacccgccaatctccagtgtcccaagtgtgtggaattgaagcttcctcgtgaagatgccgctttctgcactcaggattgttttaaggcttcgtggagctcgcataaatcggtacatttaaaggccaaacagtccaatgggacgggaaatccagagaacgaaggctgggaatattgcatgaagaaaggacagggtcgaactccgaaacttccttattttgattggacagggacattgagaccatatcctatatctagtaagcgtgtggtacctgctcatattgatttacctgattgggcagctgatggaatcccaaaagaggagcccagtagtgacctgcagcgtgttgttgagatcaaaactccggatcaaattgagaggatgcgagaaacttgtcgaatagcaagagaggttttggatgcagctgctcgtgtcatacgacctggtgtcacgactgatgaaattgatcgggtggtccatgatgctactattgctgcgggtggatatccatctcccctcaattatcattttttcccgaagtcttgctgcacgtcagtcaatgaagtaatttgccatgggattcctgatgccaggaaattagaggatggtgatatcgtcaatgttgatgtgactgtgtattacaaaggtgtccatggtgatctcaatgatacatactttgtgggaaatgttgatgaagagtctcgacggctagtccagtgtacttatgagtgcttggaaaaagcaatatccattgtaaaacctggagttagatttcgtgaagttggagaagtcattaatcgccatgctacgatggcgggattttctgtggtgaagtcatattgtggtcatggtataggggagctctttcattgtgcaccaaatattcctcactatgcaagaaataaagcagttggagtgatgaaagctgggcaaacttttacgattgaaccaatgatcaatgcaggagtttggcgtgatcgaatgtggcctgacgggtggactgctgttaccgcagatggaaaacgaagtgctcaatttgagcatacacttctggtgactgagactggagttgaagttcttacagcacggttgccttcatcgccaaaagtgtacccttggttagatgcttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016485 GO:0019538 GO:0031365 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0051604 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M24 zf-C6H2

Protein Analysis

673

Amino Acids

74.23

Weight (kDa)

8.84

Isoelectric Point (pI)

39.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003129)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45240 AT2G45240
fragaria_vesca	FvH4_7g11350 FvH4_7g11370
malus_domestica	MD02G1206000.v1.1 MD07G1118400.v1.1 MD07G1118600.v1.1
prunus_persica	Prupe.2G141300_v2.0.a1
pyrus_communis	pycom02g16990 pycom07g10610
rosa_chinensis	RchiOBHm_Chr1g0349561 RchiOBHm_Chr1g0349651 RchiOBHm_Chr4g0403521 RchiOBHm_Chr7g0223151
rosa_laevigata	RLG00000028538 RLG00000028542
rosa_multiflora	Rmu_sc0001593.1_g000008 Rmu_sc0002495.1_g000024 Rmu_sc0002495.1_g000038 Rmu_sc0006074.1_g000011 Rmu_sc0012293.1_g000003
rosa_roxburghii	Rroxscaffold_4G00305410 Rroxscaffold_4G00305430
rosa_rugosa	Rorug01G0204500 Rorug05G0164500
rosa_samantha	Rh1AG221900 Rh1AG222400 Rh1BG188000 Rh1BG188300 Rh1CG206700 Rh1CG206800 Rh1CG207100 Rh1DG217400 Rh1DG217600
rosa_wichuraiana	Rw1G018860 Rw1G018910 Rw1G018950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	577, 864
Acc36I	ACCTGC	2 cut(s)	1171, 1236
Acc65I	GGTACC	1 cut(s)	1159
AccB1I	GGYRCC	1 cut(s)	1159
AccIII	TCCGGA	1 cut(s)	1255
AciI	CCGC	8 cut(s)	104, 118, 296, 897, 951, 1388, 1706, 1902
AclWI	GGATC	1 cut(s)	1266
AcoI	YGGCCR	1 cut(s)	855
AcsI	RAATTY	1 cut(s)	496
AcyI	GRCGYC	3 cut(s)	392, 574, 861
AfaI	GTAC	6 cut(s)	125, 743, 1005, 1161, 1612, 2003
AfiI	CCNNNNNNNGG	6 cut(s)	117, 230, 295, 499, 520, 1210
AgsI	TTSAA	5 cut(s)	97, 163, 931, 1838, 1964
AhdI	GACNNNNNGTC	2 cut(s)	1337, 1601
AjiI	CACGTC	2 cut(s)	214, 1443
AjnI	CCWGG	3 cut(s)	1333, 1481, 1651
AjuI	GAANNNNNNNTTGG	2 cut(s)	455, 487
AloI	GAACNNNNNNTCC	2 cut(s)	1950, 1982
Alw21I	GWGCWC	5 cut(s)	883, 992, 1755, 1768, 1924
Alw26I	GTCTC	4 cut(s)	824, 1123, 1596, 1946
Alw44I	GTGCAC	1 cut(s)	1764
AlwI	GGATC	1 cut(s)	1266
Aor13HI	TCCGGA	1 cut(s)	1255
AoxI	GGCC	5 cut(s)	233, 522, 855, 1014, 1877
ApaLI	GTGCAC	1 cut(s)	1764
ApeKI	GCWGC	9 cut(s)	106, 293, 888, 1190, 1231, 1313, 1316, 1385, 1437
ApoI	RAATTY	1 cut(s)	496
ArsI	GACNNNNNNTTYG	2 cut(s)	161, 193
AseI	ATTAAT	1 cut(s)	1686
Asp718I	GGTACC	1 cut(s)	1159
AspLEI	GCGC	2 cut(s)	241, 489
AspS9I	GGNCC	2 cut(s)	233, 1366
AsuHPI	GGTGA	6 cut(s)	451, 647, 1511, 1559, 1732, 1957
AvaII	GGWCC	1 cut(s)	1366
AxyI	CCTNAGG	1 cut(s)	833
BaeGI	GKGCMC	2 cut(s)	286, 1768
BanI	GGYRCC	1 cut(s)	1159
BanII	GRGCYC	3 cut(s)	992, 1218, 1755
BauI	CACGAG	2 cut(s)	939, 1320
BbsI	GAAGAC	1 cut(s)	65
Bbv12I	GWGCWC	5 cut(s)	883, 992, 1755, 1768, 1924
BbvI	GCAGC	9 cut(s)	93, 305, 900, 1202, 1243, 1303, 1325, 1372, 1424
BccI	CCATC	7 cut(s)	304, 686, 1190, 1408, 1490, 1696, 1901
BceAI	ACGGC	1 cut(s)	1613
BciT130I	CCWGG	3 cut(s)	1335, 1483, 1653
BclI	TGATCA	1 cut(s)	1845
BcoDI	GTCTC	4 cut(s)	824, 1123, 1596, 1946
BfaI	CTAG	6 cut(s)	263, 315, 728, 801, 1146, 1601
BfmI	CTRYAG	1 cut(s)	1229
BfoI	RGCGCY	1 cut(s)	242
BfuAI	ACCTGC	2 cut(s)	1171, 1236
Bme1390I	CCNGG	3 cut(s)	1335, 1483, 1653
Bme18I	GGWCC	1 cut(s)	1366
BmeRI	GACNNNNNGTC	2 cut(s)	1337, 1601
BmgBI	CACGTC	2 cut(s)	214, 1443
BmgT120I	GGNCC	2 cut(s)	233, 1366
BmiI	GGNNCC	2 cut(s)	1161, 1215
BmrFI	CCNGG	3 cut(s)	1335, 1483, 1653
BmrI	ACTGGG	2 cut(s)	136, 1212
BmsI	GCATC	8 cut(s)	613, 695, 937, 1263, 1300, 1363, 1468, 2005
BmuI	ACTGGG	2 cut(s)	136, 1212
BpiI	GAAGAC	1 cut(s)	65
BpmI	CTGGAG	4 cut(s)	263, 890, 1674, 1977
BsaBI	GATNNNNATC	1 cut(s)	1399
BsaHI	GRCGYC	3 cut(s)	392, 574, 861
BsaI	GGTCTC	1 cut(s)	1123
BsaJI	CCNNGG	4 cut(s)	514, 1465, 1543, 2006
BsaWI	WCCGGW	1 cut(s)	1255
BsaXI	ACNNNNNCTCC	2 cut(s)	1950, 1980
Bsc4I	CCNNNNNNNGG	6 cut(s)	117, 230, 295, 499, 520, 1210
Bse118I	RCCGGY	3 cut(s)	62, 235, 532
Bse1I	ACTGG	7 cut(s)	131, 333, 346, 907, 1218, 1606, 1960
Bse21I	CCTNAGG	1 cut(s)	833
Bse8I	GATNNNNATC	1 cut(s)	1399
BseAI	TCCGGA	1 cut(s)	1255
BseBI	CCWGG	3 cut(s)	1335, 1483, 1653
BseDI	CCNNGG	4 cut(s)	514, 1465, 1543, 2006
BseGI	GGATG	4 cut(s)	315, 1278, 1315, 1501
BseJI	GATNNNNATC	1 cut(s)	1399
BseLI	CCNNNNNNNGG	6 cut(s)	117, 230, 295, 499, 520, 1210
BseMII	CTCAG	3 cut(s)	824, 977, 1941
BseNI	ACTGG	7 cut(s)	131, 333, 346, 907, 1218, 1606, 1960
BseRI	GAGGAG	4 cut(s)	269, 799, 802, 1226
BseSI	GKGCMC	2 cut(s)	286, 1768
BseXI	GCAGC	9 cut(s)	93, 305, 900, 1202, 1243, 1303, 1325, 1372, 1424
BseYI	CCCAGC	2 cut(s)	1056, 1817
BsgI	GTGCAG	2 cut(s)	943, 1423
BshFI	GGCC	5 cut(s)	235, 524, 857, 1016, 1879
BshNI	GGYRCC	1 cut(s)	1159
BsiHKAI	GWGCWC	5 cut(s)	883, 992, 1755, 1768, 1924
BsiSI	CCGG	5 cut(s)	63, 236, 395, 533, 1256
BslFI	GGGAC	4 cut(s)	709, 897, 1045, 1135
BslI	CCNNNNNNNGG	6 cut(s)	117, 230, 295, 499, 520, 1210
BsmAI	GTCTC	4 cut(s)	824, 1123, 1596, 1946
BsmFI	GGGAC	4 cut(s)	709, 897, 1045, 1135
BsmI	GAATGC	2 cut(s)	75, 850
BsnI	GGCC	5 cut(s)	235, 524, 857, 1016, 1879
Bso31I	GGTCTC	1 cut(s)	1123
Bsp1286I	GDGCHC	7 cut(s)	286, 883, 992, 1218, 1755, 1768, 1924
Bsp13I	TCCGGA	1 cut(s)	1255
Bsp143I	GATC	9 cut(s)	9, 48, 849, 1245, 1258, 1357, 1549, 1845, 1867
Bsp19I	CCATGG	2 cut(s)	1465, 1543
BspACI	CCGC	8 cut(s)	104, 118, 296, 897, 951, 1388, 1706, 1902
BspANI	GGCC	5 cut(s)	235, 524, 857, 1016, 1879
BspCNI	CTCAG	3 cut(s)	825, 976, 1942
BspEI	TCCGGA	1 cut(s)	1255
BspLI	GGNNCC	2 cut(s)	1161, 1215
BspMAI	CTGCAG	1 cut(s)	1233
BspMI	ACCTGC	2 cut(s)	1171, 1236
BspPI	GGATC	1 cut(s)	1266
BspT107I	GGYRCC	1 cut(s)	1159
BspTNI	GGTCTC	1 cut(s)	1123
BsrFI	RCCGGY	3 cut(s)	62, 235, 532
BsrI	ACTGG	7 cut(s)	131, 333, 346, 907, 1218, 1606, 1960
BssAI	RCCGGY	3 cut(s)	62, 235, 532
BssECI	CCNNGG	4 cut(s)	514, 1465, 1543, 2006
BssMI	GATC	9 cut(s)	9, 48, 849, 1245, 1258, 1357, 1549, 1845, 1867
BssNI	GRCGYC	3 cut(s)	392, 574, 861
BssSI	CACGAG	2 cut(s)	939, 1320
BssT1I	CCWWGG	4 cut(s)	514, 1465, 1543, 2006
Bst2BI	CACGAG	2 cut(s)	939, 1320
Bst2UI	CCWGG	3 cut(s)	1335, 1483, 1653
Bst4CI	ACNGT	4 cut(s)	274, 1023, 1525, 1980
Bst6I	CTCTTC	2 cut(s)	132, 1581
BstACI	GRCGYC	3 cut(s)	392, 574, 861
BstAPI	GCANNNNNTGC	2 cut(s)	72, 290
BstC8I	GCNNGC	5 cut(s)	68, 237, 485, 829, 992
BstDEI	CTNAG	6 cut(s)	352, 467, 762, 833, 963, 1950
BstDSI	CCRYGG	2 cut(s)	1465, 1543
BstF5I	GGATG	4 cut(s)	315, 1278, 1315, 1501
BstH2I	RGCGCY	1 cut(s)	242
BstHHI	GCGC	2 cut(s)	241, 489
BstKTI	GATC	9 cut(s)	12, 51, 852, 1248, 1261, 1360, 1552, 1848, 1870
BstMAI	GTCTC	4 cut(s)	824, 1123, 1596, 1946
BstMBI	GATC	9 cut(s)	9, 48, 849, 1245, 1258, 1357, 1549, 1845, 1867
BstMWI	GCNNNNNNNGC	9 cut(s)	72, 115, 290, 854, 863, 1382, 1703, 1901, 1990
BstNI	CCWGG	3 cut(s)	1335, 1483, 1653
BstSCI	CCNGG	3 cut(s)	1333, 1481, 1651
BstSFI	CTRYAG	1 cut(s)	1229
BstSLI	GKGCMC	2 cut(s)	286, 1768
BstV1I	GCAGC	9 cut(s)	93, 305, 900, 1202, 1243, 1303, 1325, 1372, 1424
BstV2I	GAAGAC	1 cut(s)	65
BstXI	CCANNNNNNTGG	1 cut(s)	922
Bsu36I	CCTNAGG	1 cut(s)	833
BsuRI	GGCC	5 cut(s)	235, 524, 857, 1016, 1879
BtgI	CCRYGG	2 cut(s)	1465, 1543
BtgZI	GCGATG	1 cut(s)	1974
BtrI	CACGTC	2 cut(s)	214, 1443
BtsCI	GGATG	4 cut(s)	315, 1278, 1315, 1501
BtsI	GCAGTG	2 cut(s)	483, 633
BtsIMutI	CAGTG	4 cut(s)	483, 633, 914, 1613
BveI	ACCTGC	2 cut(s)	1171, 1236
Cac8I	GCNNGC	5 cut(s)	68, 237, 485, 829, 992
CfoI	GCGC	2 cut(s)	241, 489
Cfr10I	RCCGGY	3 cut(s)	62, 235, 532
Cfr13I	GGNCC	2 cut(s)	233, 1366
CseI	GACGC	2 cut(s)	400, 699
CsiI	ACCWGGT	1 cut(s)	1333
Csp6I	GTAC	6 cut(s)	124, 742, 1004, 1160, 1611, 2002
CviAII	CATG	9 cut(s)	7, 290, 853, 1069, 1370, 1466, 1544, 1694, 1739
CviQI	GTAC	6 cut(s)	124, 742, 1004, 1160, 1611, 2002
DdeI	CTNAG	6 cut(s)	352, 467, 762, 833, 963, 1950
DpnI	GATC	9 cut(s)	11, 50, 851, 1247, 1260, 1359, 1551, 1847, 1869
DpnII	GATC	9 cut(s)	9, 48, 849, 1245, 1258, 1357, 1549, 1845, 1867
DraI	TTTAAA	1 cut(s)	1011
DriI	GACNNNNNGTC	2 cut(s)	1337, 1601
EaeI	YGGCCR	1 cut(s)	855
Eam1104I	CTCTTC	2 cut(s)	132, 1581
Eam1105I	GACNNNNNGTC	2 cut(s)	1337, 1601
EarI	CTCTTC	2 cut(s)	132, 1581
Ecl136II	GAGCTC	2 cut(s)	990, 1753
Eco130I	CCWWGG	4 cut(s)	514, 1465, 1543, 2006
Eco24I	GRGCYC	3 cut(s)	992, 1218, 1755
Eco31I	GGTCTC	1 cut(s)	1123
Eco32I	GATATC	2 cut(s)	1397, 1504
Eco47I	GGWCC	1 cut(s)	1366
Eco53kI	GAGCTC	2 cut(s)	990, 1753
Eco81I	CCTNAGG	1 cut(s)	833
EcoICRI	GAGCTC	2 cut(s)	990, 1753
EcoRII	CCWGG	3 cut(s)	1333, 1481, 1651
EcoRV	GATATC	2 cut(s)	1397, 1504
EcoT14I	CCWWGG	4 cut(s)	514, 1465, 1543, 2006
EcoT38I	GRGCYC	3 cut(s)	992, 1218, 1755
ErhI	CCWWGG	4 cut(s)	514, 1465, 1543, 2006
FaeI	CATG	9 cut(s)	10, 293, 856, 1072, 1373, 1469, 1547, 1697, 1742
FaqI	GGGAC	4 cut(s)	709, 897, 1045, 1135
FatI	CATG	9 cut(s)	6, 289, 852, 1068, 1369, 1465, 1543, 1693, 1738
FauI	CCCGC	3 cut(s)	904, 1381, 1699
FauNDI	CATATG	1 cut(s)	604
FbaI	TGATCA	1 cut(s)	1845
FokI	GGATG	4 cut(s)	322, 1285, 1322, 1508
FriOI	GRGCYC	3 cut(s)	992, 1218, 1755
FspBI	CTAG	6 cut(s)	263, 315, 728, 801, 1146, 1601
GlaI	GCGC	2 cut(s)	240, 488
GsaI	CCCAGC	2 cut(s)	1060, 1821
GsuI	CTGGAG	4 cut(s)	263, 890, 1674, 1977
HaeII	RGCGCY	1 cut(s)	242
HaeIII	GGCC	5 cut(s)	235, 524, 857, 1016, 1879
HapII	CCGG	5 cut(s)	63, 236, 395, 533, 1256
HgaI	GACGC	2 cut(s)	400, 699
HhaI	GCGC	2 cut(s)	241, 489
Hin1I	GRCGYC	3 cut(s)	392, 574, 861
Hin1II	CATG	9 cut(s)	10, 293, 856, 1072, 1373, 1469, 1547, 1697, 1742
Hin6I	GCGC	2 cut(s)	239, 487
HinP1I	GCGC	2 cut(s)	239, 487
HindIII	AAGCTT	3 cut(s)	68, 700, 932
HinfI	GANTC	5 cut(s)	364, 380, 1200, 1471, 1589
HpaII	CCGG	5 cut(s)	63, 236, 395, 533, 1256
HphI	GGTGA	6 cut(s)	451, 647, 1511, 1559, 1732, 1957
Hpy166II	GTNNAC	5 cut(s)	538, 1611, 1766, 1890, 2002
Hpy188I	TCNGA	3 cut(s)	430, 691, 1095
Hpy8I	GTNNAC	5 cut(s)	538, 1611, 1766, 1890, 2002
Hpy99I	CGWCG	4 cut(s)	218, 863, 866, 1599
HpyAV	CCTTC	5 cut(s)	428, 661, 676, 1046, 1995
HpyCH4III	ACNGT	4 cut(s)	274, 1023, 1525, 1980
HpyCH4IV	ACGT	4 cut(s)	213, 574, 861, 1442
HpyF10VI	GCNNNNNNNGC	9 cut(s)	72, 115, 290, 854, 863, 1382, 1703, 1901, 1990
HpyF3I	CTNAG	6 cut(s)	352, 467, 762, 833, 963, 1950
HpySE526I	ACGT	4 cut(s)	213, 574, 861, 1442
Hsp92I	GRCGYC	3 cut(s)	392, 574, 861
Hsp92II	CATG	9 cut(s)	10, 293, 856, 1072, 1373, 1469, 1547, 1697, 1742
HspAI	GCGC	2 cut(s)	239, 487
Kpn2I	TCCGGA	1 cut(s)	1255
KpnI	GGTACC	1 cut(s)	1163
KroI	GCCGGC	1 cut(s)	235
KroNI	GCCGGC	1 cut(s)	237
Ksp22I	TGATCA	1 cut(s)	1845
Kzo9I	GATC	9 cut(s)	9, 48, 849, 1245, 1258, 1357, 1549, 1845, 1867
LmnI	GCTCC	4 cut(s)	502, 987, 1213, 1750
Lsp1109I	GCAGC	9 cut(s)	93, 305, 900, 1202, 1243, 1303, 1325, 1372, 1424
LweI	GCATC	8 cut(s)	613, 695, 937, 1263, 1300, 1363, 1468, 2005
MabI	ACCWGGT	1 cut(s)	1333
MaeI	CTAG	6 cut(s)	263, 315, 728, 801, 1146, 1601
MaeII	ACGT	4 cut(s)	213, 574, 861, 1442
MaeIII	GTNAC	7 cut(s)	14, 205, 1223, 1339, 1519, 1897, 1945
MalI	GATC	9 cut(s)	11, 50, 851, 1247, 1260, 1359, 1551, 1847, 1869
MboI	GATC	9 cut(s)	9, 48, 849, 1245, 1258, 1357, 1549, 1845, 1867
MboII	GAAGA	9 cut(s)	67, 70, 149, 260, 625, 664, 956, 1084, 1598
MfeI	CAATTG	1 cut(s)	748
MhlI	GDGCHC	7 cut(s)	286, 883, 992, 1218, 1755, 1768, 1924
MlyI	GAGTC	2 cut(s)	358, 1598
MmeI	TCCRAC	3 cut(s)	797, 1654, 1783
MroI	TCCGGA	1 cut(s)	1255
MroNI	GCCGGC	1 cut(s)	235
MseI	TTAA	5 cut(s)	114, 360, 975, 1010, 1686
MslI	CAYNNNNRTG	2 cut(s)	80, 429
MspA1I	CMGCKG	4 cut(s)	106, 296, 1193, 1316
MspI	CCGG	5 cut(s)	63, 236, 395, 533, 1256
MspR9I	CCNGG	3 cut(s)	1335, 1483, 1653
MunI	CAATTG	1 cut(s)	748
Mva1269I	GAATGC	2 cut(s)	75, 850
MvaI	CCWGG	3 cut(s)	1335, 1483, 1653
MwoI	GCNNNNNNNGC	9 cut(s)	72, 115, 290, 854, 863, 1382, 1703, 1901, 1990
NaeI	GCCGGC	1 cut(s)	237
NcoI	CCATGG	2 cut(s)	1465, 1543
NdeI	CATATG	1 cut(s)	604
NdeII	GATC	9 cut(s)	9, 48, 849, 1245, 1258, 1357, 1549, 1845, 1867
NgoMIV	GCCGGC	1 cut(s)	235
NlaIII	CATG	9 cut(s)	10, 293, 856, 1072, 1373, 1469, 1547, 1697, 1742
NlaIV	GGNNCC	2 cut(s)	1161, 1215
NmuCI	GTSAC	4 cut(s)	1223, 1339, 1519, 1945
PcsI	WCGNNNNNNNCGW	1 cut(s)	1327
PctI	GAATGC	2 cut(s)	75, 850
PdiI	GCCGGC	1 cut(s)	237
PfeI	GAWTC	3 cut(s)	380, 1200, 1471
PflFI	GACNNNGTC	1 cut(s)	1083
PleI	GAGTC	2 cut(s)	358, 1597
PpsI	GAGTC	2 cut(s)	358, 1597
PshBI	ATTAAT	1 cut(s)	1686
Psp124BI	GAGCTC	2 cut(s)	992, 1755
Psp6I	CCWGG	3 cut(s)	1333, 1481, 1651
PspFI	CCCAGC	2 cut(s)	1056, 1817
PspGI	CCWGG	3 cut(s)	1333, 1481, 1651
PspN4I	GGNNCC	2 cut(s)	1161, 1215
PspPI	GGNCC	2 cut(s)	233, 1366
PstI	CTGCAG	1 cut(s)	1233
PsyI	GACNNNGTC	1 cut(s)	1083
PvuII	CAGCTG	2 cut(s)	1193, 1316
RsaI	GTAC	6 cut(s)	125, 743, 1005, 1161, 1612, 2003
RsaNI	GTAC	6 cut(s)	124, 742, 1004, 1160, 1611, 2002
RseI	CAYNNNNRTG	2 cut(s)	80, 429
SacI	GAGCTC	2 cut(s)	992, 1755
SaqAI	TTAA	5 cut(s)	114, 360, 975, 1010, 1686
Sau3AI	GATC	9 cut(s)	9, 48, 849, 1245, 1258, 1357, 1549, 1845, 1867
Sau96I	GGNCC	2 cut(s)	233, 1366
SchI	GAGTC	2 cut(s)	358, 1598
ScrFI	CCNGG	3 cut(s)	1335, 1483, 1653
SduI	GDGCHC	7 cut(s)	286, 883, 992, 1218, 1755, 1768, 1924
SexAI	ACCWGGT	1 cut(s)	1333
SfaNI	GCATC	8 cut(s)	613, 695, 937, 1263, 1300, 1363, 1468, 2005
SfcI	CTRYAG	1 cut(s)	1229
SinI	GGWCC	1 cut(s)	1366
SmiMI	CAYNNNNRTG	2 cut(s)	80, 429
SsiI	CCGC	8 cut(s)	104, 118, 296, 897, 951, 1388, 1706, 1902
SspI	AATATT	2 cut(s)	1064, 1774
SspMI	CTAG	6 cut(s)	263, 315, 728, 801, 1146, 1601
SstI	GAGCTC	2 cut(s)	992, 1755
StyD4I	CCNGG	3 cut(s)	1333, 1481, 1651
StyI	CCWWGG	4 cut(s)	514, 1465, 1543, 2006
TaaI	ACNGT	4 cut(s)	274, 1023, 1525, 1980
TaiI	ACGT	4 cut(s)	216, 577, 864, 1445
TaqI	TCGA	5 cut(s)	144, 1087, 1288, 1594, 1870
TatI	WGTACW	1 cut(s)	1610
TauI	GCSGC	3 cut(s)	106, 299, 953
TfiI	GAWTC	3 cut(s)	380, 1200, 1471
Tru1I	TTAA	5 cut(s)	114, 360, 975, 1010, 1686
Tru9I	TTAA	5 cut(s)	114, 360, 975, 1010, 1686
TscAI	CASTG	4 cut(s)	483, 633, 914, 1613
TseFI	GTSAC	4 cut(s)	1223, 1339, 1519, 1945
TseI	GCWGC	9 cut(s)	106, 293, 888, 1190, 1231, 1313, 1316, 1385, 1437
Tsp45I	GTSAC	4 cut(s)	1223, 1339, 1519, 1945
TspDTI	ATGAA	9 cut(s)	393, 447, 1085, 1365, 1467, 1599, 1748, 1826, 1977
TspRI	CASTG	4 cut(s)	483, 633, 914, 1613
Tth111I	GACNNNGTC	1 cut(s)	1083
VneI	GTGCAC	1 cut(s)	1764
VpaK11BI	GGWCC	1 cut(s)	1366
VspI	ATTAAT	1 cut(s)	1686
XapI	RAATTY	1 cut(s)	496
XspI	CTAG	6 cut(s)	263, 315, 728, 801, 1146, 1601
ZraI	GACGTC	2 cut(s)	575, 862

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.