Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0000929

Physical Location & Seq

Genomic Coordinates Reverse (-)

25525777 .. 25528916

Gene Structure 3140 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1175800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1395 bp

ATGACACGAGCTGATTATGACAAGGAGTGCAAGATTTGCACGCGTCCGTTCACAGTTTTCAGGTGGAGGCCTGGTCGTGATGCGCGATTTAAGAAGTCGGAGATTTGCCAGACGTGCAGTAAGTTGAAAAACGTTTGTCAAGTTTGCCTCTTGGATCTGGAATACGGTTTGCCAGTTCAGGTTCGAGATACTGCTCTAGCCATCAGTTCTGATGATGCCATTCCAAAGAGTGATGTAAATAGGGAGTTTTTCGCCGAGGAGCACGACCGTAAGGCTAGAGCTGGTATAGATTACGAATCTTCATATGGAAAGGCACGGCCCAGTGACACTATTCTGAAGCTTCAAAGAACAATGCCCTATTACAAAAGGAACAGAGCACATGTCTGCAGTTTTTACATTCGTGGTGAGTGCACAAGAGGTGCTGAGTGCCCTTACAGACACGAGATGCCCATAACCGGGGAGTTGTCGCAGCAAAACATCAAAGATCGTTACTATGGAGTCAATGATCCAGTGGCAATGAAGCTTCTTAACAAGGCCGGAGAGATGCCCTCCTTGGAACCTCCTGAGGATGGAAGCATAAGAACCTTATATGTGGGTGGGCTTGATGCGAGAATTTCTGAGCAGGATTTGAGGGATCAGTTTTATGCTCATGGTGAAATAGAATCTGTTAGGATGGTACTTCAACGAGCATGTGCGTTTGTAACCTACACAACAAGAGAAGGTGCAGAAAAGGCTGCAGAAGAGCTCTCTAACAAACTGGTAGTAAAGGGTTTGAGGTTAAAGTTAATGTGGGGTAGGCCCCAAGCACCAAAACAGGAATCAGAGGGCATGGTTGAAGCGAGGCAGCAGGCGGTGGCTCATAGTGGTTTGTTGCCTCGAGCAGTCATATCTCAACAACAGAACCAATCACAAGACCCAGCTGCGCCTGTGCACTACTACAACATGCCGCCTCCACCTTCACAGGAGAGATCATTCTATCCGTCCATGGATCCTCAAAGAATGGGTGCCCTTATTCCATCCAAGGAAGGGGCTCCTAGTGGGGCCACAGGGTCAGGAGAGCGCAGTTCTGCTTCAGAGAGGCAGCAACATGGTCAGCATTATGCTTTTCAGAACATGGCTCAACCACATAACCAATATCGTCAGCAGTTTTATCCTCCTCCATATGGGTATATGCCTCCACCAGCACCACAGTACCAGCAACACCCTCCGCAATACAATTCTGCAGTGCCGCCGCCACCATCCTTGCCAATGAACCAACAGTATCAGAATTCTGCAACACCAGGGCCAGGACCCTCAGGTTCTACGTCCTCGGGATCTGCACCTTCAAGTTCTGGACCTTCGGAATCTACTCCATCTGGATCTGGGTCTGCACCAACGGGTTCTTCAGCGCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000387 GO:0000398 GO:0000974 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008380 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0017069 GO:0017070 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0034622 GO:0034641 GO:0036002 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0050896 GO:0051704 GO:0051707 GO:0065003 GO:0071006 GO:0071007 GO:0071012 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1 Torus

Protein Analysis

465

Amino Acids

51.46

Weight (kDa)

8.54

Isoelectric Point (pI)

66.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
STL11_N	PF21369	1 - 76	1.2e-21	STL11, N-terminal
Torus	PF16131	106 - 159	1.8e-06	Torus domain
zf-CCCH_RBM22	PF25584	123 - 149	1.6e-11	RBM22 CCCH zinc finger domain
RRM_1	PF00076	196 - 253	1.2e-11	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000929)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07360 AT2G29580 AT5G04210 AT5G07060 AT5G07060
fragaria_vesca	FvH4_4g11590 FvH4_4g11590 FvH4_4g11590 FvH4_4g11590 FvH4_4g11590 FvH4_4g36530 FvH4_4g36530 FvH4_7g07370
malus_domestica	MD01G1110000.v1.1 MD07G1175800.v1.1 MD16G1006600.v1.1
prunus_persica	Prupe.2G214800_v2.0.a1 Prupe.8G143100_v2.0.a1 Prupe.8G143100_v2.0.a1 Prupe.8G143100_v2.0.a1
pyrus_communis	pycom01g13690 pycom07g17000 pycom16g00630
rosa_chinensis	RchiOBHm_Chr1g0337351 RchiOBHm_Chr4g0408701 RchiOBHm_Chr4g0446281
rosa_laevigata	RLG00000005673 RLG00000008640 RLG00000029280 RLG00000029283
rosa_multiflora	Rmu_co8341103.1_g000001 Rmu_co8350441.1_g000001 Rmu_co8408813.1_g000001 Rmu_co8519167.1_g000003 Rmu_co8522047.1_g000002 Rmu_sc0002266.1_g000007 Rmu_sc0003060.1_g000002 Rmu_sc0005878.1_g000023 Rmu_sc0021927.1_g000001
rosa_roxburghii	Rroxscaffold_4G00314450 Rroxscaffold_4G00314490 Rroxscaffold_5G00353060 Rroxscaffold_5G00386720
rosa_rugosa	Rorug01G0134600.1 Rorug01G0134800.1 Rorug04G0086900 Rorug04G0369600 Rorug04G0369600
rosa_samantha	Rh1AG153600 Rh1BG122900 Rh1BG123100 Rh1CG144600 Rh1DG161300 Rh1DG161500 Rh4AG431500 Rh4BG148400 Rh4BG440900 Rh4CG159100 Rh4CG458200 Rh4DG144000 Rh4DG439400
rosa_wichuraiana	Rw1G012580 Rw4G012370 Rw4G036850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1004
AccII	CGCG	2 cut(s)	43, 85
AciI	CCGC	5 cut(s)	851, 947, 1208, 1229, 1232
AclI	AACGTT	1 cut(s)	132
AclWI	GGATC	7 cut(s)	162, 500, 642, 983, 996, 1321, 1366
AcsI	RAATTY	2 cut(s)	612, 1267
AcuI	CTGAAG	3 cut(s)	356, 1056, 1368
AfaI	GTAC	2 cut(s)	678, 1193
AfiI	CCNNNNNNNGG	6 cut(s)	455, 456, 569, 1026, 1163, 1286
AflIII	ACRYGT	2 cut(s)	41, 379
AgsI	TTSAA	5 cut(s)	127, 344, 683, 836, 1326
AjiI	CACGTC	1 cut(s)	114
AjnI	CCWGG	3 cut(s)	70, 1279, 1285
AjuI	GAANNNNNNNTTGG	1 cut(s)	1366
AluBI	AGCT	6 cut(s)	11, 281, 340, 523, 745, 920
AluI	AGCT	6 cut(s)	11, 281, 340, 523, 745, 920
Alw21I	GWGCWC	5 cut(s)	264, 379, 413, 747, 933
Alw44I	GTGCAC	2 cut(s)	409, 929
AlwI	GGATC	7 cut(s)	162, 500, 642, 983, 996, 1321, 1366
Ama87I	CYCGRG	2 cut(s)	876, 1309
AoxI	GGCC	6 cut(s)	68, 317, 534, 797, 1041, 1283
ApaLI	GTGCAC	2 cut(s)	409, 929
ApeKI	GCWGC	5 cut(s)	469, 734, 844, 920, 1081
ApoI	RAATTY	2 cut(s)	612, 1267
AspLEI	GCGC	4 cut(s)	85, 925, 1062, 1390
AspS9I	GGNCC	6 cut(s)	318, 798, 1041, 1283, 1289, 1334
AsuC2I	CCSGG	1 cut(s)	457
AsuHPI	GGTGA	2 cut(s)	416, 665
AvaI	CYCGRG	2 cut(s)	876, 1309
AvaII	GGWCC	2 cut(s)	1289, 1334
AxyI	CCTNAGG	2 cut(s)	564, 1294
BaeGI	GKGCMC	4 cut(s)	413, 431, 933, 1009
BaeI	ACNNNNGTAYC	2 cut(s)	1175, 1208
BamHI	GGATCC	1 cut(s)	988
BanI	GGYRCC	1 cut(s)	1004
BanII	GRGCYC	2 cut(s)	747, 1033
BauI	CACGAG	2 cut(s)	6, 440
Bbv12I	GWGCWC	5 cut(s)	264, 379, 413, 747, 933
BbvI	GCAGC	5 cut(s)	481, 721, 856, 907, 1093
BccI	CCATC	6 cut(s)	209, 563, 667, 1024, 1246, 1360
BceAI	ACGGC	1 cut(s)	332
BciT130I	CCWGG	3 cut(s)	72, 1281, 1287
BcnI	CCSGG	1 cut(s)	457
BfaI	CTAG	3 cut(s)	197, 276, 1035
BfmI	CTRYAG	3 cut(s)	385, 735, 1221
BisI	GCNGC	8 cut(s)	470, 735, 845, 921, 947, 1082, 1229, 1232
BlsI	GCNGC	8 cut(s)	471, 736, 846, 922, 948, 1083, 1230, 1233
Bme1390I	CCNGG	4 cut(s)	72, 457, 1281, 1287
Bme18I	GGWCC	2 cut(s)	1289, 1334
BmeT110I	CYCGRG	2 cut(s)	876, 1309
BmgBI	CACGTC	1 cut(s)	114
BmgT120I	GGNCC	6 cut(s)	318, 798, 1041, 1283, 1289, 1334
BmiI	GGNNCC	7 cut(s)	558, 800, 990, 1006, 1032, 1042, 1291
BmrFI	CCNGG	4 cut(s)	72, 457, 1281, 1287
BmrI	ACTGGG	1 cut(s)	315
BmsI	GCATC	5 cut(s)	70, 205, 435, 534, 595
BmuI	ACTGGG	1 cut(s)	315
BplI	GAGNNNNNCTC	2 cut(s)	533, 565
BpuMI	CCSGG	1 cut(s)	457
BsaJI	CCNNGG	7 cut(s)	255, 456, 552, 984, 1020, 1280, 1308
BsaXI	ACNNNNNCTCC	2 cut(s)	58, 88
Bsc4I	CCNNNNNNNGG	6 cut(s)	455, 456, 569, 1026, 1163, 1286
Bse1I	ACTGG	4 cut(s)	173, 321, 509, 762
Bse21I	CCTNAGG	2 cut(s)	564, 1294
Bse3DI	GCAATG	1 cut(s)	522
BseBI	CCWGG	3 cut(s)	72, 1281, 1287
BseDI	CCNNGG	7 cut(s)	255, 456, 552, 984, 1020, 1280, 1308
BseGI	GGATG	4 cut(s)	574, 678, 1016, 1238
BseLI	CCNNNNNNNGG	6 cut(s)	455, 456, 569, 1026, 1163, 1286
BseMI	GCAATG	1 cut(s)	522
BseMII	CTCAG	4 cut(s)	414, 555, 609, 1308
BseNI	ACTGG	4 cut(s)	173, 321, 509, 762
BseRI	GAGGAG	2 cut(s)	272, 1146
BseSI	GKGCMC	4 cut(s)	413, 431, 933, 1009
BseXI	GCAGC	5 cut(s)	481, 721, 856, 907, 1093
BseYI	CCCAGC	1 cut(s)	916
BsgI	GTGCAG	4 cut(s)	136, 744, 1302, 1353
Bsh1236I	CGCG	2 cut(s)	43, 85
Bsh1285I	CGRYCG	1 cut(s)	268
BshFI	GGCC	6 cut(s)	70, 319, 536, 799, 1043, 1285
BshNI	GGYRCC	1 cut(s)	1004
BsiEI	CGRYCG	1 cut(s)	268
BsiHKAI	GWGCWC	5 cut(s)	264, 379, 413, 747, 933
BsiHKCI	CYCGRG	2 cut(s)	876, 1309
BsiSI	CCGG	2 cut(s)	456, 537
BslI	CCNNNNNNNGG	6 cut(s)	455, 456, 569, 1026, 1163, 1286
BsnI	GGCC	6 cut(s)	70, 319, 536, 799, 1043, 1285
BsoBI	CYCGRG	2 cut(s)	876, 1309
Bsp1286I	GDGCHC	8 cut(s)	264, 379, 413, 431, 747, 933, 1009, 1033
Bsp143I	GATC	8 cut(s)	154, 484, 505, 634, 968, 988, 1313, 1358
Bsp19I	CCATGG	1 cut(s)	984
BspACI	CCGC	5 cut(s)	851, 947, 1208, 1229, 1232
BspANI	GGCC	6 cut(s)	70, 319, 536, 799, 1043, 1285
BspCNI	CTCAG	4 cut(s)	415, 556, 610, 1307
BspFNI	CGCG	2 cut(s)	43, 85
BspLI	GGNNCC	7 cut(s)	558, 800, 990, 1006, 1032, 1042, 1291
BspMAI	CTGCAG	3 cut(s)	389, 739, 1225
BspPI	GGATC	7 cut(s)	162, 500, 642, 983, 996, 1321, 1366
BspQI	GCTCTTC	1 cut(s)	735
BspT107I	GGYRCC	1 cut(s)	1004
BsrDI	GCAATG	1 cut(s)	522
BsrI	ACTGG	4 cut(s)	173, 321, 509, 762
BssECI	CCNNGG	7 cut(s)	255, 456, 552, 984, 1020, 1280, 1308
BssMI	GATC	8 cut(s)	154, 484, 505, 634, 968, 988, 1313, 1358
BssSI	CACGAG	2 cut(s)	6, 440
BssT1I	CCWWGG	3 cut(s)	552, 984, 1020
Bst2BI	CACGAG	2 cut(s)	6, 440
Bst2UI	CCWGG	3 cut(s)	72, 1281, 1287
Bst4CI	ACNGT	5 cut(s)	55, 167, 269, 1191, 1260
Bst6I	CTCTTC	1 cut(s)	735
BstAPI	GCANNNNNTGC	1 cut(s)	36
BstC8I	GCNNGC	2 cut(s)	41, 849
BstDEI	CTNAG	4 cut(s)	423, 564, 618, 1294
BstDSI	CCRYGG	1 cut(s)	984
BstF5I	GGATG	4 cut(s)	574, 678, 1016, 1238
BstFNI	CGCG	2 cut(s)	43, 85
BstHHI	GCGC	4 cut(s)	85, 925, 1062, 1390
BstKTI	GATC	8 cut(s)	157, 487, 508, 637, 971, 991, 1316, 1361
BstMBI	GATC	8 cut(s)	154, 484, 505, 634, 968, 988, 1313, 1358
BstMCI	CGRYCG	1 cut(s)	268
BstMWI	GCNNNNNNNGC	3 cut(s)	36, 114, 731
BstNI	CCWGG	3 cut(s)	72, 1281, 1287
BstNSI	RCATGY	3 cut(s)	383, 693, 946
BstSCI	CCNGG	4 cut(s)	70, 455, 1279, 1285
BstSFI	CTRYAG	3 cut(s)	385, 735, 1221
BstSLI	GKGCMC	4 cut(s)	413, 431, 933, 1009
BstUI	CGCG	2 cut(s)	43, 85
BstV1I	GCAGC	5 cut(s)	481, 721, 856, 907, 1093
BstX2I	RGATCY	4 cut(s)	154, 988, 1313, 1358
BstYI	RGATCY	4 cut(s)	154, 988, 1313, 1358
Bsu36I	CCTNAGG	2 cut(s)	564, 1294
BsuRI	GGCC	6 cut(s)	70, 319, 536, 799, 1043, 1285
BtgI	CCRYGG	1 cut(s)	984
BtrI	CACGTC	1 cut(s)	114
BtsCI	GGATG	4 cut(s)	574, 678, 1016, 1238
BtsI	GCAGTG	1 cut(s)	1230
BtsIMutI	CAGTG	3 cut(s)	328, 516, 1230
Cac8I	GCNNGC	2 cut(s)	41, 849
CfoI	GCGC	4 cut(s)	85, 925, 1062, 1390
Cfr13I	GGNCC	6 cut(s)	318, 798, 1041, 1283, 1289, 1334
CseI	GACGC	1 cut(s)	32
Csp6I	GTAC	2 cut(s)	677, 1192
CspCI	CAANNNNNGTGG	2 cut(s)	1224, 1259
CviAII	CATG	8 cut(s)	380, 650, 690, 829, 943, 985, 1088, 1114
CviQI	GTAC	2 cut(s)	677, 1192
DdeI	CTNAG	4 cut(s)	423, 564, 618, 1294
DpnI	GATC	8 cut(s)	156, 486, 507, 636, 970, 990, 1315, 1360
DpnII	GATC	8 cut(s)	154, 484, 505, 634, 968, 988, 1313, 1358
Eam1104I	CTCTTC	1 cut(s)	735
EarI	CTCTTC	1 cut(s)	735
Ecl136II	GAGCTC	1 cut(s)	745
Eco130I	CCWWGG	3 cut(s)	552, 984, 1020
Eco147I	AGGCCT	1 cut(s)	70
Eco24I	GRGCYC	2 cut(s)	747, 1033
Eco47I	GGWCC	2 cut(s)	1289, 1334
Eco53kI	GAGCTC	1 cut(s)	745
Eco57I	CTGAAG	3 cut(s)	356, 1056, 1368
Eco81I	CCTNAGG	2 cut(s)	564, 1294
Eco88I	CYCGRG	2 cut(s)	876, 1309
EcoICRI	GAGCTC	1 cut(s)	745
EcoO109I	RGGNCCY	2 cut(s)	798, 1289
EcoRI	GAATTC	1 cut(s)	1267
EcoRII	CCWGG	3 cut(s)	70, 1279, 1285
EcoT14I	CCWWGG	3 cut(s)	552, 984, 1020
EcoT38I	GRGCYC	2 cut(s)	747, 1033
ErhI	CCWWGG	3 cut(s)	552, 984, 1020
FaeI	CATG	8 cut(s)	383, 653, 693, 832, 946, 988, 1091, 1117
FatI	CATG	8 cut(s)	379, 649, 689, 828, 942, 984, 1087, 1113
FauNDI	CATATG	2 cut(s)	304, 1162
Fnu4HI	GCNGC	8 cut(s)	470, 735, 845, 921, 947, 1082, 1229, 1232
FokI	GGATG	4 cut(s)	581, 685, 1003, 1225
FriOI	GRGCYC	2 cut(s)	747, 1033
Fsp4HI	GCNGC	8 cut(s)	470, 735, 845, 921, 947, 1082, 1229, 1232
FspBI	CTAG	3 cut(s)	197, 276, 1035
GlaI	GCGC	4 cut(s)	84, 924, 1061, 1389
GluI	GCNGC	8 cut(s)	470, 735, 845, 921, 947, 1082, 1229, 1232
GsaI	CCCAGC	1 cut(s)	920
HaeIII	GGCC	6 cut(s)	70, 319, 536, 799, 1043, 1285
HapII	CCGG	2 cut(s)	456, 537
HgaI	GACGC	1 cut(s)	32
HhaI	GCGC	4 cut(s)	85, 925, 1062, 1390
Hin1II	CATG	8 cut(s)	383, 653, 693, 832, 946, 988, 1091, 1117
Hin6I	GCGC	4 cut(s)	83, 923, 1060, 1388
HinP1I	GCGC	4 cut(s)	83, 923, 1060, 1388
HindIII	AAGCTT	2 cut(s)	338, 521
HinfI	GANTC	5 cut(s)	296, 498, 662, 818, 1343
HpaII	CCGG	2 cut(s)	456, 537
HphI	GGTGA	2 cut(s)	416, 665
Hpy166II	GTNNAC	3 cut(s)	51, 411, 931
Hpy188I	TCNGA	9 cut(s)	100, 211, 336, 619, 823, 1075, 1110, 1266, 1342
Hpy188III	TCNNGA	8 cut(s)	77, 158, 185, 563, 1053, 1311, 1332, 1356
Hpy8I	GTNNAC	3 cut(s)	51, 411, 931
HpyAV	CCTTC	5 cut(s)	713, 966, 1019, 1332, 1347
HpyCH4III	ACNGT	5 cut(s)	55, 167, 269, 1191, 1260
HpyCH4IV	ACGT	3 cut(s)	113, 132, 1304
HpyF10VI	GCNNNNNNNGC	3 cut(s)	36, 114, 731
HpyF3I	CTNAG	4 cut(s)	423, 564, 618, 1294
HpySE526I	ACGT	3 cut(s)	113, 132, 1304
Hsp92II	CATG	8 cut(s)	383, 653, 693, 832, 946, 988, 1091, 1117
HspAI	GCGC	4 cut(s)	83, 923, 1060, 1388
Kzo9I	GATC	8 cut(s)	154, 484, 505, 634, 968, 988, 1313, 1358
LguI	GCTCTTC	1 cut(s)	735
LmnI	GCTCC	2 cut(s)	259, 1036
Lsp1109I	GCAGC	5 cut(s)	481, 721, 856, 907, 1093
LweI	GCATC	5 cut(s)	70, 205, 435, 534, 595
MaeI	CTAG	3 cut(s)	197, 276, 1035
MaeII	ACGT	3 cut(s)	113, 132, 1304
MaeIII	GTNAC	3 cut(s)	323, 488, 700
MalI	GATC	8 cut(s)	156, 486, 507, 636, 970, 990, 1315, 1360
MboI	GATC	8 cut(s)	154, 484, 505, 634, 968, 988, 1313, 1358
MboII	GAAGA	3 cut(s)	291, 752, 1374
MflI	RGATCY	4 cut(s)	154, 988, 1313, 1358
MhlI	GDGCHC	8 cut(s)	264, 379, 413, 431, 747, 933, 1009, 1033
MluCI	AATT	3 cut(s)	612, 1216, 1267
MluI	ACGCGT	1 cut(s)	41
MlyI	GAGTC	1 cut(s)	507
MmeI	TCCRAC	1 cut(s)	78
MseI	TTAA	4 cut(s)	90, 528, 779, 785
MspA1I	CMGCKG	1 cut(s)	920
MspI	CCGG	2 cut(s)	456, 537
MspR9I	CCNGG	4 cut(s)	72, 457, 1281, 1287
MvaI	CCWGG	3 cut(s)	72, 1281, 1287
MvnI	CGCG	2 cut(s)	43, 85
MwoI	GCNNNNNNNGC	3 cut(s)	36, 114, 731
NciI	CCSGG	1 cut(s)	457
NcoI	CCATGG	1 cut(s)	984
NdeI	CATATG	2 cut(s)	304, 1162
NdeII	GATC	8 cut(s)	154, 484, 505, 634, 968, 988, 1313, 1358
NlaIII	CATG	8 cut(s)	383, 653, 693, 832, 946, 988, 1091, 1117
NlaIV	GGNNCC	7 cut(s)	558, 800, 990, 1006, 1032, 1042, 1291
NmeAIII	GCCGAG	1 cut(s)	280
NmuCI	GTSAC	1 cut(s)	323
NspI	RCATGY	3 cut(s)	383, 693, 946
PaeR7I	CTCGAG	1 cut(s)	876
PceI	AGGCCT	1 cut(s)	70
PciI	ACATGT	1 cut(s)	379
PciSI	GCTCTTC	1 cut(s)	735
PcsI	WCGNNNNNNNCGW	1 cut(s)	82
PfeI	GAWTC	4 cut(s)	296, 662, 818, 1343
PkrI	GCNGC	8 cut(s)	471, 736, 846, 922, 948, 1083, 1230, 1233
PleI	GAGTC	1 cut(s)	506
PpsI	GAGTC	1 cut(s)	506
PpuMI	RGGWCCY	1 cut(s)	1289
PscI	ACATGT	1 cut(s)	379
Psp124BI	GAGCTC	1 cut(s)	747
Psp1406I	AACGTT	1 cut(s)	132
Psp5II	RGGWCCY	1 cut(s)	1289
Psp6I	CCWGG	3 cut(s)	70, 1279, 1285
PspFI	CCCAGC	1 cut(s)	916
PspGI	CCWGG	3 cut(s)	70, 1279, 1285
PspN4I	GGNNCC	7 cut(s)	558, 800, 990, 1006, 1032, 1042, 1291
PspPI	GGNCC	6 cut(s)	318, 798, 1041, 1283, 1289, 1334
PspPPI	RGGWCCY	1 cut(s)	1289
PspXI	VCTCGAGB	1 cut(s)	876
PstI	CTGCAG	3 cut(s)	389, 739, 1225
PsuI	RGATCY	4 cut(s)	154, 988, 1313, 1358
PvuII	CAGCTG	1 cut(s)	920
RsaI	GTAC	2 cut(s)	678, 1193
RsaNI	GTAC	2 cut(s)	677, 1192
SacI	GAGCTC	1 cut(s)	747
SapI	GCTCTTC	1 cut(s)	735
SaqAI	TTAA	4 cut(s)	90, 528, 779, 785
SatI	GCNGC	8 cut(s)	470, 735, 845, 921, 947, 1082, 1229, 1232
Sau3AI	GATC	8 cut(s)	154, 484, 505, 634, 968, 988, 1313, 1358
Sau96I	GGNCC	6 cut(s)	318, 798, 1041, 1283, 1289, 1334
SchI	GAGTC	1 cut(s)	507
ScrFI	CCNGG	4 cut(s)	72, 457, 1281, 1287
SduI	GDGCHC	8 cut(s)	264, 379, 413, 431, 747, 933, 1009, 1033
SfaNI	GCATC	5 cut(s)	70, 205, 435, 534, 595
SfcI	CTRYAG	3 cut(s)	385, 735, 1221
Sfr274I	CTCGAG	1 cut(s)	876
SinI	GGWCC	2 cut(s)	1289, 1334
SlaI	CTCGAG	1 cut(s)	876
SmlI	CTYRAG	1 cut(s)	876
SmoI	CTYRAG	1 cut(s)	876
Sse9I	AATT	3 cut(s)	612, 1216, 1267
SseBI	AGGCCT	1 cut(s)	70
SsiI	CCGC	5 cut(s)	851, 947, 1208, 1229, 1232
SspMI	CTAG	3 cut(s)	197, 276, 1035
SstI	GAGCTC	1 cut(s)	747
StuI	AGGCCT	1 cut(s)	70
StyD4I	CCNGG	4 cut(s)	70, 455, 1279, 1285
StyI	CCWWGG	3 cut(s)	552, 984, 1020
TaaI	ACNGT	5 cut(s)	55, 167, 269, 1191, 1260
TaiI	ACGT	3 cut(s)	116, 135, 1307
TaqI	TCGA	2 cut(s)	184, 877
TasI	AATT	3 cut(s)	612, 1216, 1267
TauI	GCSGC	3 cut(s)	949, 1231, 1234
TfiI	GAWTC	4 cut(s)	296, 662, 818, 1343
Tru1I	TTAA	4 cut(s)	90, 528, 779, 785
Tru9I	TTAA	4 cut(s)	90, 528, 779, 785
TscAI	CASTG	3 cut(s)	328, 516, 1230
TseFI	GTSAC	1 cut(s)	323
TseI	GCWGC	5 cut(s)	469, 734, 844, 920, 1081
Tsp45I	GTSAC	1 cut(s)	323
TspDTI	ATGAA	3 cut(s)	291, 533, 1265
TspGWI	ACGGA	2 cut(s)	36, 969
TspRI	CASTG	3 cut(s)	328, 516, 1230
VneI	GTGCAC	2 cut(s)	409, 929
VpaK11BI	GGWCC	2 cut(s)	1289, 1334
XapI	RAATTY	2 cut(s)	612, 1267
XceI	RCATGY	3 cut(s)	383, 693, 946
XhoI	CTCGAG	1 cut(s)	876
XspI	CTAG	3 cut(s)	197, 276, 1035

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.