Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0000929

Physical Location & Seq

Genomic Coordinates Forward (+)

29133528 .. 29135480

Gene Structure 1953 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G012370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1455 bp

ATGGCGCACAGGTTGCTAAGGAATGTGGAGGCGGACGGTTGGGAACGATCGGACTTCCCCATCATCTGCGAGTCATGCCTCGGCGACAACCCTTACGAGTGCAAGATCTGCACCCGCCCCTTCACCGTCTTCCGGTGGCGCCCCGGCCGCGACGCCCGCTTCAAGAAGTCCGAGATTTGCCAGACCTGCAGCAAGTTGAAGAACGTCTGCCAAGTCTGCCTCCTCGATCTCGACTACGGCCTCCCCGTCCAGGTCCGCGACACCGCCCTCGCCATCGGCTCCGACGACGCCATTCCCAAGAGCGACGTCAATCGCGAGTTCTTCGCCGAGGAACATGACCGAAAGGCTCGGGCTGGAATTGATTATGAATCGTCGTACGGGAAGGCGAGGCCGAATGACACGATTCTGAAGCTGCAGAGAACGACGCCGTATTACAAGAGGAACCGGGCGCATGTGTGCAGTTTCTATATTCGGGGCGAGTGCACTAGAGGTGCTGAGTGCCCTTACCGGCACGAGATGCCCGTCACTGGCGAGCTGTCACAGCAAAATATCAAAGATCGATACTACGGAGTCAATGATCCTGTGGCAATGAAGCTACTTAACAAGGCTGGAGAGATGCCGTCCCTGGAACCGCCGGAGGATGAAAGCATTAGAACCCTGTATGTGGGTGGGATTGATGCAAGAGTCTCTGAGCAGGATTTAAGGGATCAGTTTTATGCTCATGGCGAAATAGAATCCGTTAGGATGGTGCTCCAACGAGCATGTGCTTTTGTAACATACACAACAAGAGAAGCTGCAGAAAAGGCCGCAGAAGAACTCTCCAATAGGCTGGTGGTGAAGGGTTTGAGGTTGAAGTTAATGTGGGGTAGGCCGCAAGCACCGAAACAGGACTTGGAGGGCACAGATGAGGCTAGGCAACAGGCCGTGGCTCATAGTGGCTTGTTGCCTCGAGCGGTCATATCCCAACAGCAGAGCCAATTACAAGACCAATCTGCACCACCAGTGCAGCATTACTACAACATCCCACCTCCAGCTTCGCAGGAGAGAACGTATTATCCATCCATGGATCCTCAAAGAATGGGTGCAGTTGTTCGATCGCAGGATGGAGCTCCAAGTGGCCCCAGAGGGTCAGGTGAGAACAGTTCTGGTTCTGAGAGGCAGCATTATGCTTTTCAAAGTATGGCTCCTCCACATGGTCAATATAATCAGCAGTTTTATCCTCAACCATACAGCGGTTATATGCCTCCACCACCTTATCAGCAATACCCTCCGCAATATCATGCTGCAGTGCCACCACCATCATCCTTGCCGATGAATCAACATTACCAGCATTCTGCAACACCAGGGACTGCACCCTCAGGTTCTACATCGTCTGTACCTGCACAATCAAATTCTGGACCTTCCGAGTCTGGCTCTGGCTCTGGGCCTGCGCCAACAGGGTCATCACAGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000387 GO:0000398 GO:0000974 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008380 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0017069 GO:0017070 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0034622 GO:0034641 GO:0036002 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0050896 GO:0051704 GO:0051707 GO:0065003 GO:0071006 GO:0071007 GO:0071012 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1 Torus

Protein Analysis

484

Amino Acids

53.93

Weight (kDa)

6.86

Isoelectric Point (pI)

67.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
STL11_N	PF21369	20 - 99	2.3e-21	STL11, N-terminal
Torus	PF16131	140 - 183	1.5e-06	Torus domain
zf-CCCH_RBM22	PF25584	147 - 173	1.7e-11	RBM22 CCCH zinc finger domain
RRM_1	PF00076	220 - 278	6.2e-11	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000929)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07360 AT2G29580 AT5G04210 AT5G07060 AT5G07060
fragaria_vesca	FvH4_4g11590 FvH4_4g11590 FvH4_4g11590 FvH4_4g11590 FvH4_4g11590 FvH4_4g36530 FvH4_4g36530 FvH4_7g07370
malus_domestica	MD01G1110000.v1.1 MD07G1175800.v1.1 MD16G1006600.v1.1
prunus_persica	Prupe.2G214800_v2.0.a1 Prupe.8G143100_v2.0.a1 Prupe.8G143100_v2.0.a1 Prupe.8G143100_v2.0.a1
pyrus_communis	pycom01g13690 pycom07g17000 pycom16g00630
rosa_chinensis	RchiOBHm_Chr1g0337351 RchiOBHm_Chr4g0408701 RchiOBHm_Chr4g0446281
rosa_laevigata	RLG00000005673 RLG00000008640 RLG00000029280 RLG00000029283
rosa_multiflora	Rmu_co8341103.1_g000001 Rmu_co8350441.1_g000001 Rmu_co8408813.1_g000001 Rmu_co8519167.1_g000003 Rmu_co8522047.1_g000002 Rmu_sc0002266.1_g000007 Rmu_sc0003060.1_g000002 Rmu_sc0005878.1_g000023 Rmu_sc0021927.1_g000001
rosa_roxburghii	Rroxscaffold_4G00314450 Rroxscaffold_4G00314490 Rroxscaffold_5G00353060 Rroxscaffold_5G00386720
rosa_rugosa	Rorug01G0134600.1 Rorug01G0134800.1 Rorug04G0086900 Rorug04G0369600 Rorug04G0369600
rosa_samantha	Rh1AG153600 Rh1BG122900 Rh1BG123100 Rh1CG144600 Rh1DG161300 Rh1DG161500 Rh4AG431500 Rh4BG148400 Rh4BG440900 Rh4CG159100 Rh4CG458200 Rh4DG144000 Rh4DG439400
rosa_wichuraiana	Rw1G012580 Rw4G012370 Rw4G036850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	309
Acc36I	ACCTGC	2 cut(s)	194, 1387
AccB1I	GGYRCC	1 cut(s)	138
AccBSI	CCGCTC	1 cut(s)	953
AccII	CGCG	3 cut(s)	150, 258, 315
AclWI	GGATC	4 cut(s)	572, 714, 1061, 1074
AcoI	YGGCCR	1 cut(s)	145
AcsI	RAATTY	1 cut(s)	1390
AcuI	CTGAAG	1 cut(s)	428
AcyI	GRCGYC	5 cut(s)	139, 153, 288, 306, 425
AfaI	GTAC	2 cut(s)	377, 1377
AfiI	CCNNNNNNNGG	6 cut(s)	132, 250, 527, 664, 1193, 1232
AgsI	TTSAA	4 cut(s)	163, 199, 853, 1175
AjnI	CCWGG	3 cut(s)	249, 624, 1342
AjuI	GAANNNNNNNTTGG	2 cut(s)	875, 907
AleI	CACNNNNGTG	1 cut(s)	1450
AloI	GAACNNNNNNTCC	2 cut(s)	1039, 1071
AluBI	AGCT	6 cut(s)	412, 535, 595, 794, 1034, 1109
AluI	AGCT	6 cut(s)	412, 535, 595, 794, 1034, 1109
Alw21I	GWGCWC	3 cut(s)	485, 753, 1111
Alw26I	GTCTC	1 cut(s)	691
Alw44I	GTGCAC	1 cut(s)	481
AlwI	GGATC	4 cut(s)	572, 714, 1061, 1074
AlwNI	CAGNNNCTG	1 cut(s)	1349
Ama87I	CYCGRG	2 cut(s)	348, 948
AoxI	GGCC	8 cut(s)	145, 238, 389, 804, 869, 921, 1117, 1424
ApaLI	GTGCAC	1 cut(s)	481
ApeKI	GCWGC	6 cut(s)	189, 412, 794, 1006, 1159, 1283
ApoI	RAATTY	1 cut(s)	1390
AspLEI	GCGC	4 cut(s)	7, 141, 451, 1432
AspS9I	GGNCC	4 cut(s)	253, 1118, 1397, 1424
AsuC2I	CCSGG	2 cut(s)	144, 446
AsuHPI	GGTGA	3 cut(s)	115, 847, 1145
AvaI	CYCGRG	2 cut(s)	348, 948
AvaII	GGWCC	2 cut(s)	253, 1397
AxyI	CCTNAGG	1 cut(s)	1357
BaeGI	GKGCMC	3 cut(s)	485, 503, 902
BamHI	GGATCC	1 cut(s)	1066
BanI	GGYRCC	1 cut(s)	138
BanII	GRGCYC	1 cut(s)	1111
BauI	CACGAG	1 cut(s)	512
BbsI	GAAGAC	1 cut(s)	121
Bbv12I	GWGCWC	3 cut(s)	485, 753, 1111
BbvI	GCAGC	6 cut(s)	201, 399, 781, 1018, 1171, 1270
BccI	CCATC	6 cut(s)	68, 281, 739, 1066, 1097, 1306
BceAI	ACGGC	4 cut(s)	253, 412, 604, 908
BciT130I	CCWGG	3 cut(s)	251, 626, 1344
BcnI	CCSGG	2 cut(s)	144, 446
BcoDI	GTCTC	1 cut(s)	691
BfaI	CTAG	2 cut(s)	486, 912
BfmI	CTRYAG	4 cut(s)	187, 413, 795, 1284
BfoI	RGCGCY	1 cut(s)	142
BfuAI	ACCTGC	2 cut(s)	194, 1387
BglII	AGATCT	1 cut(s)	105
BisI	GCNGC	9 cut(s)	148, 190, 413, 795, 807, 872, 1007, 1160, 1284
BlsI	GCNGC	9 cut(s)	149, 191, 414, 796, 808, 873, 1008, 1161, 1285
Bme1390I	CCNGG	5 cut(s)	144, 251, 446, 626, 1344
Bme18I	GGWCC	2 cut(s)	253, 1397
BmeT110I	CYCGRG	2 cut(s)	348, 948
BmgT120I	GGNCC	4 cut(s)	253, 1118, 1397, 1424
BmiI	GGNNCC	7 cut(s)	140, 280, 443, 630, 1068, 1120, 1185
BmrFI	CCNGG	5 cut(s)	144, 251, 446, 626, 1344
BmsI	GCATC	3 cut(s)	507, 606, 667
BpiI	GAAGAC	1 cut(s)	121
BplI	GAGNNNNNCTC	2 cut(s)	1397, 1429
BpmI	CTGGAG	2 cut(s)	630, 1014
Bpu10I	CCTNAGC	1 cut(s)	17
BpuMI	CCSGG	2 cut(s)	144, 446
Bsa29I	ATCGAT	1 cut(s)	559
BsaHI	GRCGYC	5 cut(s)	139, 153, 288, 306, 425
BsaJI	CCNNGG	7 cut(s)	79, 142, 327, 624, 924, 1062, 1343
BsaWI	WCCGGW	1 cut(s)	132
BsaXI	ACNNNNNCTCC	2 cut(s)	1034, 1064
Bsc4I	CCNNNNNNNGG	6 cut(s)	132, 250, 527, 664, 1193, 1232
Bse118I	RCCGGY	1 cut(s)	507
Bse1I	ACTGG	2 cut(s)	532, 1001
Bse21I	CCTNAGG	1 cut(s)	1357
Bse3DI	GCAATG	1 cut(s)	594
BseBI	CCWGG	3 cut(s)	251, 626, 1344
BseCI	ATCGAT	1 cut(s)	559
BseDI	CCNNGG	7 cut(s)	79, 142, 327, 624, 924, 1062, 1343
BseGI	GGATG	6 cut(s)	646, 750, 1020, 1058, 1108, 1301
BseLI	CCNNNNNNNGG	6 cut(s)	132, 250, 527, 664, 1193, 1232
BseMI	GCAATG	1 cut(s)	594
BseMII	CTCAG	4 cut(s)	486, 681, 1143, 1371
BseNI	ACTGG	2 cut(s)	532, 1001
BseRI	GAGGAG	2 cut(s)	212, 1176
BseSI	GKGCMC	3 cut(s)	485, 503, 902
BseX3I	CGGCCG	1 cut(s)	145
BseXI	GCAGC	6 cut(s)	201, 399, 781, 1018, 1171, 1270
BsgI	GTGCAG	7 cut(s)	94, 478, 978, 1025, 1104, 1335, 1365
Bsh1236I	CGCG	3 cut(s)	150, 258, 315
Bsh1285I	CGRYCG	3 cut(s)	50, 148, 1097
BshFI	GGCC	8 cut(s)	147, 240, 391, 806, 871, 923, 1119, 1426
BshNI	GGYRCC	1 cut(s)	138
BshVI	ATCGAT	1 cut(s)	559
BsiEI	CGRYCG	3 cut(s)	50, 148, 1097
BsiHKAI	GWGCWC	3 cut(s)	485, 753, 1111
BsiHKCI	CYCGRG	2 cut(s)	348, 948
BsiSI	CCGG	5 cut(s)	133, 144, 445, 508, 635
BsiWI	CGTACG	1 cut(s)	375
BslFI	GGGAC	2 cut(s)	607, 1360
BslI	CCNNNNNNNGG	6 cut(s)	132, 250, 527, 664, 1193, 1232
BsmAI	GTCTC	1 cut(s)	691
BsmFI	GGGAC	2 cut(s)	607, 1360
BsmI	GAATGC	1 cut(s)	1330
BsnI	GGCC	8 cut(s)	147, 240, 391, 806, 871, 923, 1119, 1426
BsoBI	CYCGRG	2 cut(s)	348, 948
Bsp1286I	GDGCHC	5 cut(s)	485, 503, 753, 902, 1111
Bsp143I	GATC	8 cut(s)	47, 105, 226, 556, 577, 706, 1066, 1094
Bsp19I	CCATGG	1 cut(s)	1062
Bsp68I	TCGCGA	1 cut(s)	315
BspANI	GGCC	8 cut(s)	147, 240, 391, 806, 871, 923, 1119, 1426
BspCNI	CTCAG	4 cut(s)	487, 682, 1144, 1370
BspDI	ATCGAT	1 cut(s)	559
BspFNI	CGCG	3 cut(s)	150, 258, 315
BspLI	GGNNCC	7 cut(s)	140, 280, 443, 630, 1068, 1120, 1185
BspMAI	CTGCAG	4 cut(s)	191, 417, 799, 1288
BspMI	ACCTGC	2 cut(s)	194, 1387
BspPI	GGATC	4 cut(s)	572, 714, 1061, 1074
BspT107I	GGYRCC	1 cut(s)	138
BsrBI	CCGCTC	1 cut(s)	953
BsrDI	GCAATG	1 cut(s)	594
BsrFI	RCCGGY	1 cut(s)	507
BsrI	ACTGG	2 cut(s)	532, 1001
BssAI	RCCGGY	1 cut(s)	507
BssECI	CCNNGG	7 cut(s)	79, 142, 327, 624, 924, 1062, 1343
BssMI	GATC	8 cut(s)	47, 105, 226, 556, 577, 706, 1066, 1094
BssNI	GRCGYC	5 cut(s)	139, 153, 288, 306, 425
BssSI	CACGAG	1 cut(s)	512
BssT1I	CCWWGG	1 cut(s)	1062
Bst2BI	CACGAG	1 cut(s)	512
Bst2UI	CCWGG	3 cut(s)	251, 626, 1344
Bst4CI	ACNGT	3 cut(s)	38, 127, 1142
BstACI	GRCGYC	5 cut(s)	139, 153, 288, 306, 425
BstAPI	GCANNNNNTGC	3 cut(s)	13, 108, 517
BstC8I	GCNNGC	4 cut(s)	157, 533, 876, 1428
BstDEI	CTNAG	5 cut(s)	17, 495, 690, 1152, 1357
BstDSI	CCRYGG	2 cut(s)	924, 1062
BstF5I	GGATG	6 cut(s)	646, 750, 1020, 1058, 1108, 1301
BstFNI	CGCG	3 cut(s)	150, 258, 315
BstH2I	RGCGCY	1 cut(s)	142
BstHHI	GCGC	4 cut(s)	7, 141, 451, 1432
BstKTI	GATC	8 cut(s)	50, 108, 229, 559, 580, 709, 1069, 1097
BstMAI	GTCTC	1 cut(s)	691
BstMBI	GATC	8 cut(s)	47, 105, 226, 556, 577, 706, 1066, 1094
BstMCI	CGRYCG	3 cut(s)	50, 148, 1097
BstNI	CCWGG	3 cut(s)	251, 626, 1344
BstNSI	RCATGY	2 cut(s)	455, 765
BstSCI	CCNGG	5 cut(s)	142, 249, 444, 624, 1342
BstSFI	CTRYAG	4 cut(s)	187, 413, 795, 1284
BstSLI	GKGCMC	3 cut(s)	485, 503, 902
BstUI	CGCG	3 cut(s)	150, 258, 315
BstV1I	GCAGC	6 cut(s)	201, 399, 781, 1018, 1171, 1270
BstV2I	GAAGAC	1 cut(s)	121
BstX2I	RGATCY	2 cut(s)	105, 1066
BstXI	CCANNNNNNTGG	1 cut(s)	829
BstYI	RGATCY	2 cut(s)	105, 1066
BstZI	CGGCCG	1 cut(s)	145
Bsu15I	ATCGAT	1 cut(s)	559
Bsu36I	CCTNAGG	1 cut(s)	1357
BsuRI	GGCC	8 cut(s)	147, 240, 391, 806, 871, 923, 1119, 1426
BsuTUI	ATCGAT	1 cut(s)	559
BtgI	CCRYGG	2 cut(s)	924, 1062
BtsCI	GGATG	6 cut(s)	646, 750, 1020, 1058, 1108, 1301
BtsI	GCAGTG	1 cut(s)	1293
BtsIMutI	CAGTG	3 cut(s)	525, 1008, 1293
BtuMI	TCGCGA	1 cut(s)	315
BveI	ACCTGC	2 cut(s)	194, 1387
Cac8I	GCNNGC	4 cut(s)	157, 533, 876, 1428
CaiI	CAGNNNCTG	1 cut(s)	1349
CfoI	GCGC	4 cut(s)	7, 141, 451, 1432
Cfr10I	RCCGGY	1 cut(s)	507
Cfr13I	GGNCC	4 cut(s)	253, 1118, 1397, 1424
ClaI	ATCGAT	1 cut(s)	559
CseI	GACGC	3 cut(s)	161, 296, 433
Csp6I	GTAC	2 cut(s)	376, 1376
CviAII	CATG	8 cut(s)	75, 335, 452, 722, 762, 1063, 1193, 1280
CviQI	GTAC	2 cut(s)	376, 1376
DdeI	CTNAG	5 cut(s)	17, 495, 690, 1152, 1357
DinI	GGCGCC	1 cut(s)	140
DpnI	GATC	8 cut(s)	49, 107, 228, 558, 579, 708, 1068, 1096
DpnII	GATC	8 cut(s)	47, 105, 226, 556, 577, 706, 1066, 1094
EaeI	YGGCCR	1 cut(s)	145
EagI	CGGCCG	1 cut(s)	145
EciI	GGCGGA	1 cut(s)	47
Ecl136II	GAGCTC	1 cut(s)	1109
EclXI	CGGCCG	1 cut(s)	145
Eco130I	CCWWGG	1 cut(s)	1062
Eco24I	GRGCYC	1 cut(s)	1111
Eco47I	GGWCC	2 cut(s)	253, 1397
Eco52I	CGGCCG	1 cut(s)	145
Eco53kI	GAGCTC	1 cut(s)	1109
Eco57I	CTGAAG	1 cut(s)	428
Eco81I	CCTNAGG	1 cut(s)	1357
Eco88I	CYCGRG	2 cut(s)	348, 948
EcoICRI	GAGCTC	1 cut(s)	1109
EcoRII	CCWGG	3 cut(s)	249, 624, 1342
EcoT14I	CCWWGG	1 cut(s)	1062
EcoT38I	GRGCYC	1 cut(s)	1111
EgeI	GGCGCC	1 cut(s)	140
EheI	GGCGCC	1 cut(s)	140
ErhI	CCWWGG	1 cut(s)	1062
FaeI	CATG	8 cut(s)	78, 338, 455, 725, 765, 1066, 1196, 1283
FaqI	GGGAC	2 cut(s)	607, 1360
FatI	CATG	8 cut(s)	74, 334, 451, 721, 761, 1062, 1192, 1279
FauI	CCCGC	2 cut(s)	122, 164
Fnu4HI	GCNGC	9 cut(s)	148, 190, 413, 795, 807, 872, 1007, 1160, 1284
FokI	GGATG	6 cut(s)	653, 757, 1007, 1045, 1115, 1288
FriOI	GRGCYC	1 cut(s)	1111
Fsp4HI	GCNGC	9 cut(s)	148, 190, 413, 795, 807, 872, 1007, 1160, 1284
FspBI	CTAG	2 cut(s)	486, 912
GlaI	GCGC	4 cut(s)	6, 140, 450, 1431
GluI	GCNGC	9 cut(s)	148, 190, 413, 795, 807, 872, 1007, 1160, 1284
GsuI	CTGGAG	2 cut(s)	630, 1014
HaeII	RGCGCY	1 cut(s)	142
HaeIII	GGCC	8 cut(s)	147, 240, 391, 806, 871, 923, 1119, 1426
HapII	CCGG	5 cut(s)	133, 144, 445, 508, 635
HgaI	GACGC	3 cut(s)	161, 296, 433
HhaI	GCGC	4 cut(s)	7, 141, 451, 1432
Hin1I	GRCGYC	5 cut(s)	139, 153, 288, 306, 425
Hin1II	CATG	8 cut(s)	78, 338, 455, 725, 765, 1066, 1196, 1283
Hin6I	GCGC	4 cut(s)	5, 139, 449, 1430
HinP1I	GCGC	4 cut(s)	5, 139, 449, 1430
HinfI	GANTC	8 cut(s)	71, 368, 403, 570, 684, 734, 1315, 1406
HpaII	CCGG	5 cut(s)	133, 144, 445, 508, 635
HphI	GGTGA	3 cut(s)	115, 847, 1145
Hpy166II	GTNNAC	1 cut(s)	483
Hpy188I	TCNGA	7 cut(s)	52, 172, 283, 408, 691, 1153, 1405
Hpy188III	TCNNGA	4 cut(s)	163, 230, 314, 1395
Hpy8I	GTNNAC	1 cut(s)	483
Hpy99I	CGWCG	6 cut(s)	155, 287, 290, 308, 376, 427
HpyAV	CCTTC	4 cut(s)	130, 376, 832, 1410
HpyCH4III	ACNGT	3 cut(s)	38, 127, 1142
HpyCH4IV	ACGT	3 cut(s)	204, 306, 1049
HpyF3I	CTNAG	5 cut(s)	17, 495, 690, 1152, 1357
HpySE526I	ACGT	3 cut(s)	204, 306, 1049
Hsp92I	GRCGYC	5 cut(s)	139, 153, 288, 306, 425
Hsp92II	CATG	8 cut(s)	78, 338, 455, 725, 765, 1066, 1196, 1283
HspAI	GCGC	4 cut(s)	5, 139, 449, 1430
KasI	GGCGCC	1 cut(s)	138
Kzo9I	GATC	8 cut(s)	47, 105, 226, 556, 577, 706, 1066, 1094
LmnI	GCTCC	5 cut(s)	284, 756, 1106, 1114, 1189
Lsp1109I	GCAGC	6 cut(s)	201, 399, 781, 1018, 1171, 1270
LweI	GCATC	3 cut(s)	507, 606, 667
MaeI	CTAG	2 cut(s)	486, 912
MaeII	ACGT	3 cut(s)	204, 306, 1049
MaeIII	GTNAC	3 cut(s)	523, 537, 772
MalI	GATC	8 cut(s)	49, 107, 228, 558, 579, 708, 1068, 1096
MbiI	CCGCTC	1 cut(s)	953
MboI	GATC	8 cut(s)	47, 105, 226, 556, 577, 706, 1066, 1094
MboII	GAAGA	4 cut(s)	121, 211, 313, 824
MflI	RGATCY	2 cut(s)	105, 1066
MhlI	GDGCHC	5 cut(s)	485, 503, 753, 902, 1111
MluCI	AATT	3 cut(s)	357, 977, 1390
Mly113I	GGCGCC	1 cut(s)	139
MlyI	GAGTC	4 cut(s)	80, 579, 693, 1415
MmeI	TCCRAC	2 cut(s)	306, 778
MseI	TTAA	3 cut(s)	600, 701, 857
MslI	CAYNNNNRTG	1 cut(s)	1450
MspA1I	CMGCKG	1 cut(s)	1233
MspI	CCGG	5 cut(s)	133, 144, 445, 508, 635
MspR9I	CCNGG	5 cut(s)	144, 251, 446, 626, 1344
Mva1269I	GAATGC	1 cut(s)	1330
MvaI	CCWGG	3 cut(s)	251, 626, 1344
MvnI	CGCG	3 cut(s)	150, 258, 315
NarI	GGCGCC	1 cut(s)	139
NciI	CCSGG	2 cut(s)	144, 446
NcoI	CCATGG	1 cut(s)	1062
NdeII	GATC	8 cut(s)	47, 105, 226, 556, 577, 706, 1066, 1094
NlaIII	CATG	8 cut(s)	78, 338, 455, 725, 765, 1066, 1196, 1283
NlaIV	GGNNCC	7 cut(s)	140, 280, 443, 630, 1068, 1120, 1185
NmeAIII	GCCGAG	2 cut(s)	60, 352
NmuCI	GTSAC	2 cut(s)	523, 537
NruI	TCGCGA	1 cut(s)	315
NspI	RCATGY	2 cut(s)	455, 765
OliI	CACNNNNGTG	1 cut(s)	1450
PaeR7I	CTCGAG	1 cut(s)	948
PcsI	WCGNNNNNNNCGW	4 cut(s)	243, 282, 312, 519
PctI	GAATGC	1 cut(s)	1330
PfeI	GAWTC	4 cut(s)	368, 403, 734, 1315
Pfl23II	CGTACG	1 cut(s)	375
PkrI	GCNGC	9 cut(s)	149, 191, 414, 796, 808, 873, 1008, 1161, 1285
Ple19I	CGATCG	2 cut(s)	50, 1097
PleI	GAGTC	4 cut(s)	79, 578, 692, 1414
PluTI	GGCGCC	1 cut(s)	142
PpsI	GAGTC	4 cut(s)	79, 578, 692, 1414
Psp124BI	GAGCTC	1 cut(s)	1111
Psp6I	CCWGG	3 cut(s)	249, 624, 1342
PspGI	CCWGG	3 cut(s)	249, 624, 1342
PspLI	CGTACG	1 cut(s)	375
PspN4I	GGNNCC	7 cut(s)	140, 280, 443, 630, 1068, 1120, 1185
PspPI	GGNCC	4 cut(s)	253, 1118, 1397, 1424
PspXI	VCTCGAGB	1 cut(s)	948
PstI	CTGCAG	4 cut(s)	191, 417, 799, 1288
PstNI	CAGNNNCTG	1 cut(s)	1349
PsuI	RGATCY	2 cut(s)	105, 1066
PvuI	CGATCG	2 cut(s)	50, 1097
RruI	TCGCGA	1 cut(s)	315
RsaI	GTAC	2 cut(s)	377, 1377
RsaNI	GTAC	2 cut(s)	376, 1376
RseI	CAYNNNNRTG	1 cut(s)	1450
SacI	GAGCTC	1 cut(s)	1111
SaqAI	TTAA	3 cut(s)	600, 701, 857
SatI	GCNGC	9 cut(s)	148, 190, 413, 795, 807, 872, 1007, 1160, 1284
Sau3AI	GATC	8 cut(s)	47, 105, 226, 556, 577, 706, 1066, 1094
Sau96I	GGNCC	4 cut(s)	253, 1118, 1397, 1424
SchI	GAGTC	4 cut(s)	80, 579, 693, 1415
ScrFI	CCNGG	5 cut(s)	144, 251, 446, 626, 1344
SduI	GDGCHC	5 cut(s)	485, 503, 753, 902, 1111
SfaNI	GCATC	3 cut(s)	507, 606, 667
SfcI	CTRYAG	4 cut(s)	187, 413, 795, 1284
SfoI	GGCGCC	1 cut(s)	140
Sfr274I	CTCGAG	1 cut(s)	948
SinI	GGWCC	2 cut(s)	253, 1397
SlaI	CTCGAG	1 cut(s)	948
SmiMI	CAYNNNNRTG	1 cut(s)	1450
SmlI	CTYRAG	1 cut(s)	948
SmoI	CTYRAG	1 cut(s)	948
Sse9I	AATT	3 cut(s)	357, 977, 1390
SspDI	GGCGCC	1 cut(s)	138
SspMI	CTAG	2 cut(s)	486, 912
SstI	GAGCTC	1 cut(s)	1111
StyD4I	CCNGG	5 cut(s)	142, 249, 444, 624, 1342
StyI	CCWWGG	1 cut(s)	1062
TaaI	ACNGT	3 cut(s)	38, 127, 1142
TaiI	ACGT	3 cut(s)	207, 309, 1052
TaqI	TCGA	5 cut(s)	225, 231, 559, 949, 1093
TaqII	GACCGA	1 cut(s)	354
TasI	AATT	3 cut(s)	357, 977, 1390
TauI	GCSGC	3 cut(s)	150, 809, 874
TfiI	GAWTC	4 cut(s)	368, 403, 734, 1315
Tru1I	TTAA	3 cut(s)	600, 701, 857
Tru9I	TTAA	3 cut(s)	600, 701, 857
TscAI	CASTG	3 cut(s)	532, 1008, 1293
TseFI	GTSAC	2 cut(s)	523, 537
TseI	GCWGC	6 cut(s)	189, 412, 794, 1006, 1159, 1283
Tsp45I	GTSAC	2 cut(s)	523, 537
TspDTI	ATGAA	4 cut(s)	381, 605, 657, 1328
TspGWI	ACGGA	2 cut(s)	582, 727
TspRI	CASTG	3 cut(s)	532, 1008, 1293
VneI	GTGCAC	1 cut(s)	481
VpaK11BI	GGWCC	2 cut(s)	253, 1397
XapI	RAATTY	1 cut(s)	1390
XceI	RCATGY	2 cut(s)	455, 765
XcmI	CCANNNNNNNNNTGG	1 cut(s)	829
XhoI	CTCGAG	1 cut(s)	948
XspI	CTAG	2 cut(s)	486, 912
ZraI	GACGTC	1 cut(s)	307

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.