Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0000929

Physical Location & Seq

Genomic Coordinates Reverse (-)

14103863 .. 14105890

Gene Structure 2028 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g13690.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1320 bp

ATGACACGAGCTGATTATGACAAGGAGTGCAAGATTTGCACACGTCCGTTCACAGTTTTCAGGTGGAGGCCTGGTCGTGATGCGCGATTTAAGAAGTCGGAGATTTGCCAGACGTGCAGTAAGTTGAAAAACGTTTGTCAAGTTTGTCTCTTGGATCTTGAATATGGCTTGCCAGTTCAGGTTCGAGATACTGCTCTGGCCATCAGTTCTGACGATGCTATTCCAAAGAGTGATGTAAATAGGGAGTTTTTTGCTGAGGAACATGACCGAAAGGCTAGAGCTGGTATAGATTATGAATCTTCATACGGAAAGGCACGGCCCAGTGACACTATTCTGAAACTTCAAAGAACAACACCCTATTACAAAAGGAACAGAGCACATGTCTGCAGTTTTTACATCCGGGAGTCAATGATCGATCCAGTGGCGATGAAGCTTCTTAACAAGGCCGGAGAGATGCCCTCCTTGGAACCTCCTGAGGATGGAAGCATAAGAACCTTATACGTGGGTGGGCTTGATGCGAGAATTTCGGAGCAGGATTTGAGGGATCAGTTTTATGCTCATGGAGAAATAGAATCCGTTAGGATGGTACTGCAACGAGCATGTGCGTTTGTAACCTACACAACAAGAGAAGGTGCAGAAAAGGCTGCAGAAGAACTCTCTAACAAACTGGTAATAAAGGGTTTGAGGTTGAAGTTAATGTGGGGTAGGCCTCAAGCACCTAAACAGGAATCAGAGGGCACGGCTGAAGCTAGACAGCAGGCGGTGGCTCATGGTGGTTTGTTGCCTCGAGCAGTCATATCTCAACAACAGAACCAATCACAAGACCCAGCTGCACCTGTGCACTACTACAACGTGCCACCTCCACCTTCACAGGAGAGGTCATTCTATCCATCCATGGATCCTCAAAGAATGGGTGCCCTTATTCCATCGAAGGAAGGGGCTCCTAGTGGGATCACAGGGTCAGGAGAGCGCAGTTCCGCTTCAGAGAGGCAGCAACATAGTCAGCATTATGCTTTTCAGAACATGGCTCATCCACATGGCCAATATCGTCAGCAGTTTTATCCTCCATATGGGCATATGCCTCCACCATCACCACAGTACCAGCAATACCCTCCGCAATATCATGCTACAGTGCCGCCACCAACATCCTTGCCAATGAACCATCAGTACCAGCATTCTGCGACACCAGGGCCGGCACCCCCAGGTTCTACATCTTCGGGATCTGCGCCGTCATCAGGATCTGCACCTTCAAGTTCTGGACCTTCGGAATCTACTCCATCTGCATCCGGATCTGCACCAACGGGGTCATCACAGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000387 GO:0000398 GO:0000974 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008380 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0017069 GO:0017070 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0034622 GO:0034641 GO:0036002 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0050896 GO:0051704 GO:0051707 GO:0065003 GO:0071006 GO:0071007 GO:0071012 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1 Torus

Protein Analysis

440

Amino Acids

48.49

Weight (kDa)

8.63

Isoelectric Point (pI)

65.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000929)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07360 AT2G29580 AT5G04210 AT5G07060 AT5G07060
fragaria_vesca	FvH4_4g11590 FvH4_4g11590 FvH4_4g11590 FvH4_4g11590 FvH4_4g11590 FvH4_4g36530 FvH4_4g36530 FvH4_7g07370
malus_domestica	MD01G1110000.v1.1 MD07G1175800.v1.1 MD16G1006600.v1.1
prunus_persica	Prupe.2G214800_v2.0.a1 Prupe.8G143100_v2.0.a1 Prupe.8G143100_v2.0.a1 Prupe.8G143100_v2.0.a1
pyrus_communis	pycom01g13690 pycom07g17000 pycom16g00630
rosa_chinensis	RchiOBHm_Chr1g0337351 RchiOBHm_Chr4g0408701 RchiOBHm_Chr4g0446281
rosa_laevigata	RLG00000005673 RLG00000008640 RLG00000029280 RLG00000029283
rosa_multiflora	Rmu_co8341103.1_g000001 Rmu_co8350441.1_g000001 Rmu_co8408813.1_g000001 Rmu_co8519167.1_g000003 Rmu_co8522047.1_g000002 Rmu_sc0002266.1_g000007 Rmu_sc0003060.1_g000002 Rmu_sc0005878.1_g000023 Rmu_sc0021927.1_g000001
rosa_roxburghii	Rroxscaffold_4G00314450 Rroxscaffold_4G00314490 Rroxscaffold_5G00353060 Rroxscaffold_5G00386720
rosa_rugosa	Rorug01G0134600.1 Rorug01G0134800.1 Rorug04G0086900 Rorug04G0369600 Rorug04G0369600
rosa_samantha	Rh1AG153600 Rh1BG122900 Rh1BG123100 Rh1CG144600 Rh1DG161300 Rh1DG161500 Rh4AG431500 Rh4BG148400 Rh4BG440900 Rh4CG159100 Rh4CG458200 Rh4DG144000 Rh4DG439400
rosa_wichuraiana	Rw1G012580 Rw4G012370 Rw4G036850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	914, 1195
AccII	CGCG	1 cut(s)	85
AccIII	TCCGGA	1 cut(s)	1286
AciI	CCGC	4 cut(s)	761, 978, 1115, 1136
AclI	AACGTT	1 cut(s)	132
AclWI	GGATC	9 cut(s)	162, 410, 552, 893, 906, 959, 1228, 1246, 1297
AcoI	YGGCCR	2 cut(s)	198, 1039
AcsI	RAATTY	1 cut(s)	522
AcuI	CTGAAG	2 cut(s)	765, 966
AfaI	GTAC	3 cut(s)	588, 1100, 1169
AfiI	CCNNNNNNNGG	3 cut(s)	479, 1070, 1235
AflIII	ACRYGT	2 cut(s)	41, 379
AgsI	TTSAA	5 cut(s)	127, 161, 344, 691, 1251
AjiI	CACGTC	2 cut(s)	44, 114
AjnI	CCWGG	3 cut(s)	70, 1186, 1201
AleI	CACNNNNGTG	1 cut(s)	1315
AluBI	AGCT	5 cut(s)	11, 281, 433, 749, 830
AluI	AGCT	5 cut(s)	11, 281, 433, 749, 830
Alw21I	GWGCWC	2 cut(s)	379, 843
Alw26I	GTCTC	1 cut(s)	152
Alw44I	GTGCAC	1 cut(s)	839
AlwI	GGATC	9 cut(s)	162, 410, 552, 893, 906, 959, 1228, 1246, 1297
AlwNI	CAGNNNCTG	1 cut(s)	1241
Ama87I	CYCGRG	1 cut(s)	786
Aor13HI	TCCGGA	1 cut(s)	1286
AoxI	GGCC	7 cut(s)	68, 198, 317, 444, 707, 1039, 1190
ApaLI	GTGCAC	1 cut(s)	839
ApeKI	GCWGC	3 cut(s)	644, 830, 991
ApoI	RAATTY	1 cut(s)	522
AspLEI	GCGC	3 cut(s)	85, 972, 1228
AspS9I	GGNCC	3 cut(s)	318, 1190, 1259
AsuC2I	CCSGG	1 cut(s)	401
AsuHPI	GGTGA	1 cut(s)	1083
AvaI	CYCGRG	1 cut(s)	786
AvaII	GGWCC	1 cut(s)	1259
AxyI	CCTNAGG	1 cut(s)	474
BaeGI	GKGCMC	3 cut(s)	740, 843, 919
BaeI	ACNNNNGTAYC	2 cut(s)	1082, 1115
BalI	TGGCCA	2 cut(s)	200, 1041
BamHI	GGATCC	1 cut(s)	898
BanI	GGYRCC	2 cut(s)	914, 1195
BanII	GRGCYC	1 cut(s)	943
BauI	CACGAG	1 cut(s)	6
Bbv12I	GWGCWC	2 cut(s)	379, 843
BbvCI	CCTCAGC	1 cut(s)	255
BbvI	GCAGC	3 cut(s)	631, 817, 1003
BccI	CCATC	8 cut(s)	209, 473, 577, 898, 934, 1096, 1170, 1285
BceAI	ACGGC	3 cut(s)	332, 756, 1213
BciT130I	CCWGG	3 cut(s)	72, 1188, 1203
BcnI	CCSGG	1 cut(s)	401
BcoDI	GTCTC	1 cut(s)	152
BfaI	CTAG	3 cut(s)	276, 750, 945
BfmI	CTRYAG	3 cut(s)	385, 645, 1128
BisI	GCNGC	4 cut(s)	645, 831, 992, 1136
BlsI	GCNGC	4 cut(s)	646, 832, 993, 1137
Bme1390I	CCNGG	4 cut(s)	72, 401, 1188, 1203
Bme18I	GGWCC	1 cut(s)	1259
BmeT110I	CYCGRG	1 cut(s)	786
BmgBI	CACGTC	2 cut(s)	44, 114
BmgT120I	GGNCC	3 cut(s)	318, 1190, 1259
BmiI	GGNNCC	5 cut(s)	468, 900, 916, 942, 1197
BmrFI	CCNGG	4 cut(s)	72, 401, 1188, 1203
BmrI	ACTGGG	1 cut(s)	315
BmsI	GCATC	5 cut(s)	70, 205, 444, 505, 1292
BmuI	ACTGGG	1 cut(s)	315
BplI	GAGNNNNNCTC	2 cut(s)	443, 475
Bpu10I	CCTNAGC	1 cut(s)	255
BpuEI	CTTGAG	1 cut(s)	696
BpuMI	CCSGG	1 cut(s)	401
Bsa29I	ATCGAT	1 cut(s)	414
BsaAI	YACGTR	1 cut(s)	502
BsaJI	CCNNGG	4 cut(s)	462, 894, 1187, 1201
BsaWI	WCCGGW	1 cut(s)	1286
BsaXI	ACNNNNNCTCC	2 cut(s)	58, 88
Bsc4I	CCNNNNNNNGG	3 cut(s)	479, 1070, 1235
Bse118I	RCCGGY	1 cut(s)	1192
Bse1I	ACTGG	4 cut(s)	173, 321, 419, 672
Bse21I	CCTNAGG	1 cut(s)	474
BseAI	TCCGGA	1 cut(s)	1286
BseBI	CCWGG	3 cut(s)	72, 1188, 1203
BseCI	ATCGAT	1 cut(s)	414
BseDI	CCNNGG	4 cut(s)	462, 894, 1187, 1201
BseGI	GGATG	7 cut(s)	396, 484, 588, 890, 1030, 1145, 1283
BseLI	CCNNNNNNNGG	3 cut(s)	479, 1070, 1235
BseMII	CTCAG	2 cut(s)	246, 465
BseNI	ACTGG	4 cut(s)	173, 321, 419, 672
BseSI	GKGCMC	3 cut(s)	740, 843, 919
BseXI	GCAGC	3 cut(s)	631, 817, 1003
BseYI	CCCAGC	1 cut(s)	826
BsgI	GTGCAG	5 cut(s)	136, 654, 816, 1227, 1278
Bsh1236I	CGCG	1 cut(s)	85
BshFI	GGCC	7 cut(s)	70, 200, 319, 446, 709, 1041, 1192
BshNI	GGYRCC	2 cut(s)	914, 1195
BshVI	ATCGAT	1 cut(s)	414
BsiHKAI	GWGCWC	2 cut(s)	379, 843
BsiHKCI	CYCGRG	1 cut(s)	786
BsiSI	CCGG	4 cut(s)	400, 447, 1193, 1287
BslI	CCNNNNNNNGG	3 cut(s)	479, 1070, 1235
BsmAI	GTCTC	1 cut(s)	152
BsmI	GAATGC	1 cut(s)	1174
BsnI	GGCC	7 cut(s)	70, 200, 319, 446, 709, 1041, 1192
BsoBI	CYCGRG	1 cut(s)	786
Bsp1286I	GDGCHC	5 cut(s)	379, 740, 843, 919, 943
Bsp13I	TCCGGA	1 cut(s)	1286
Bsp143I	GATC	9 cut(s)	154, 411, 415, 544, 898, 951, 1220, 1238, 1289
Bsp19I	CCATGG	1 cut(s)	894
BspACI	CCGC	4 cut(s)	761, 978, 1115, 1136
BspANI	GGCC	7 cut(s)	70, 200, 319, 446, 709, 1041, 1192
BspCNI	CTCAG	2 cut(s)	247, 466
BspDI	ATCGAT	1 cut(s)	414
BspEI	TCCGGA	1 cut(s)	1286
BspFNI	CGCG	1 cut(s)	85
BspLI	GGNNCC	5 cut(s)	468, 900, 916, 942, 1197
BspMAI	CTGCAG	2 cut(s)	389, 649
BspPI	GGATC	9 cut(s)	162, 410, 552, 893, 906, 959, 1228, 1246, 1297
BspT107I	GGYRCC	2 cut(s)	914, 1195
BsrFI	RCCGGY	1 cut(s)	1192
BsrI	ACTGG	4 cut(s)	173, 321, 419, 672
BssAI	RCCGGY	1 cut(s)	1192
BssECI	CCNNGG	4 cut(s)	462, 894, 1187, 1201
BssMI	GATC	9 cut(s)	154, 411, 415, 544, 898, 951, 1220, 1238, 1289
BssSI	CACGAG	1 cut(s)	6
BssT1I	CCWWGG	2 cut(s)	462, 894
Bst2BI	CACGAG	1 cut(s)	6
Bst2UI	CCWGG	3 cut(s)	72, 1188, 1203
Bst4CI	ACNGT	3 cut(s)	55, 1098, 1132
BstAPI	GCANNNNNTGC	1 cut(s)	36
BstBAI	YACGTR	1 cut(s)	502
BstC8I	GCNNGC	3 cut(s)	170, 759, 1194
BstDEI	CTNAG	2 cut(s)	255, 474
BstDSI	CCRYGG	1 cut(s)	894
BstF5I	GGATG	7 cut(s)	396, 484, 588, 890, 1030, 1145, 1283
BstFNI	CGCG	1 cut(s)	85
BstHHI	GCGC	3 cut(s)	85, 972, 1228
BstKTI	GATC	9 cut(s)	157, 414, 418, 547, 901, 954, 1223, 1241, 1292
BstMAI	GTCTC	1 cut(s)	152
BstMBI	GATC	9 cut(s)	154, 411, 415, 544, 898, 951, 1220, 1238, 1289
BstMWI	GCNNNNNNNGC	3 cut(s)	36, 114, 641
BstNI	CCWGG	3 cut(s)	72, 1188, 1203
BstNSI	RCATGY	2 cut(s)	383, 603
BstSCI	CCNGG	4 cut(s)	70, 399, 1186, 1201
BstSFI	CTRYAG	3 cut(s)	385, 645, 1128
BstSLI	GKGCMC	3 cut(s)	740, 843, 919
BstUI	CGCG	1 cut(s)	85
BstV1I	GCAGC	3 cut(s)	631, 817, 1003
BstX2I	RGATCY	5 cut(s)	154, 898, 1220, 1238, 1289
BstYI	RGATCY	5 cut(s)	154, 898, 1220, 1238, 1289
Bsu15I	ATCGAT	1 cut(s)	414
Bsu36I	CCTNAGG	1 cut(s)	474
BsuRI	GGCC	7 cut(s)	70, 200, 319, 446, 709, 1041, 1192
BsuTUI	ATCGAT	1 cut(s)	414
BtgI	CCRYGG	1 cut(s)	894
BtgZI	GCGATG	1 cut(s)	440
BtrI	CACGTC	2 cut(s)	44, 114
BtsCI	GGATG	7 cut(s)	396, 484, 588, 890, 1030, 1145, 1283
BtsIMutI	CAGTG	3 cut(s)	328, 426, 1137
Cac8I	GCNNGC	3 cut(s)	170, 759, 1194
CaiI	CAGNNNCTG	1 cut(s)	1241
CfoI	GCGC	3 cut(s)	85, 972, 1228
Cfr10I	RCCGGY	1 cut(s)	1192
Cfr13I	GGNCC	3 cut(s)	318, 1190, 1259
ClaI	ATCGAT	1 cut(s)	414
Csp6I	GTAC	3 cut(s)	587, 1099, 1168
CviAII	CATG	9 cut(s)	263, 380, 560, 600, 770, 895, 1024, 1037, 1124
CviQI	GTAC	3 cut(s)	587, 1099, 1168
DdeI	CTNAG	2 cut(s)	255, 474
DpnI	GATC	9 cut(s)	156, 413, 417, 546, 900, 953, 1222, 1240, 1291
DpnII	GATC	9 cut(s)	154, 411, 415, 544, 898, 951, 1220, 1238, 1289
EaeI	YGGCCR	2 cut(s)	198, 1039
Eco130I	CCWWGG	2 cut(s)	462, 894
Eco147I	AGGCCT	2 cut(s)	70, 709
Eco24I	GRGCYC	1 cut(s)	943
Eco47I	GGWCC	1 cut(s)	1259
Eco57I	CTGAAG	2 cut(s)	765, 966
Eco81I	CCTNAGG	1 cut(s)	474
Eco88I	CYCGRG	1 cut(s)	786
EcoRII	CCWGG	3 cut(s)	70, 1186, 1201
EcoT14I	CCWWGG	2 cut(s)	462, 894
EcoT38I	GRGCYC	1 cut(s)	943
ErhI	CCWWGG	2 cut(s)	462, 894
FaeI	CATG	9 cut(s)	266, 383, 563, 603, 773, 898, 1027, 1040, 1127
FatI	CATG	9 cut(s)	262, 379, 559, 599, 769, 894, 1023, 1036, 1123
FauNDI	CATATG	2 cut(s)	1069, 1077
Fnu4HI	GCNGC	4 cut(s)	645, 831, 992, 1136
FokI	GGATG	7 cut(s)	383, 491, 595, 877, 1017, 1132, 1270
FriOI	GRGCYC	1 cut(s)	943
Fsp4HI	GCNGC	4 cut(s)	645, 831, 992, 1136
FspBI	CTAG	3 cut(s)	276, 750, 945
GlaI	GCGC	3 cut(s)	84, 971, 1227
GluI	GCNGC	4 cut(s)	645, 831, 992, 1136
GsaI	CCCAGC	1 cut(s)	830
HaeIII	GGCC	7 cut(s)	70, 200, 319, 446, 709, 1041, 1192
HapII	CCGG	4 cut(s)	400, 447, 1193, 1287
HhaI	GCGC	3 cut(s)	85, 972, 1228
Hin1II	CATG	9 cut(s)	266, 383, 563, 603, 773, 898, 1027, 1040, 1127
Hin6I	GCGC	3 cut(s)	83, 970, 1226
HinP1I	GCGC	3 cut(s)	83, 970, 1226
HindIII	AAGCTT	1 cut(s)	431
HinfI	GANTC	5 cut(s)	296, 404, 572, 728, 1268
HpaII	CCGG	4 cut(s)	400, 447, 1193, 1287
HphI	GGTGA	1 cut(s)	1083
Hpy166II	GTNNAC	2 cut(s)	51, 841
Hpy188I	TCNGA	8 cut(s)	100, 211, 336, 529, 733, 985, 1020, 1267
Hpy188III	TCNNGA	9 cut(s)	77, 158, 185, 473, 963, 1218, 1236, 1257, 1287
Hpy8I	GTNNAC	2 cut(s)	51, 841
HpyAV	CCTTC	6 cut(s)	623, 876, 925, 929, 1257, 1272
HpyCH4III	ACNGT	3 cut(s)	55, 1098, 1132
HpyCH4IV	ACGT	5 cut(s)	43, 113, 132, 501, 852
HpyF10VI	GCNNNNNNNGC	3 cut(s)	36, 114, 641
HpyF3I	CTNAG	2 cut(s)	255, 474
HpySE526I	ACGT	5 cut(s)	43, 113, 132, 501, 852
Hsp92II	CATG	9 cut(s)	266, 383, 563, 603, 773, 898, 1027, 1040, 1127
HspAI	GCGC	3 cut(s)	83, 970, 1226
Kpn2I	TCCGGA	1 cut(s)	1286
KroI	GCCGGC	1 cut(s)	1192
KroNI	GCCGGC	1 cut(s)	1194
Kzo9I	GATC	9 cut(s)	154, 411, 415, 544, 898, 951, 1220, 1238, 1289
LmnI	GCTCC	2 cut(s)	529, 946
Lsp1109I	GCAGC	3 cut(s)	631, 817, 1003
LweI	GCATC	5 cut(s)	70, 205, 444, 505, 1292
MaeI	CTAG	3 cut(s)	276, 750, 945
MaeII	ACGT	5 cut(s)	43, 113, 132, 501, 852
MaeIII	GTNAC	2 cut(s)	323, 610
MalI	GATC	9 cut(s)	156, 413, 417, 546, 900, 953, 1222, 1240, 1291
MboI	GATC	9 cut(s)	154, 411, 415, 544, 898, 951, 1220, 1238, 1289
MboII	GAAGA	3 cut(s)	291, 662, 1206
MflI	RGATCY	5 cut(s)	154, 898, 1220, 1238, 1289
MhlI	GDGCHC	5 cut(s)	379, 740, 843, 919, 943
MlsI	TGGCCA	2 cut(s)	200, 1041
MluCI	AATT	1 cut(s)	522
MluNI	TGGCCA	2 cut(s)	200, 1041
MlyI	GAGTC	1 cut(s)	413
MmeI	TCCRAC	1 cut(s)	78
Mox20I	TGGCCA	2 cut(s)	200, 1041
MroI	TCCGGA	1 cut(s)	1286
MroNI	GCCGGC	1 cut(s)	1192
MscI	TGGCCA	2 cut(s)	200, 1041
MseI	TTAA	3 cut(s)	90, 438, 695
MslI	CAYNNNNRTG	2 cut(s)	1035, 1315
Msp20I	TGGCCA	2 cut(s)	200, 1041
MspA1I	CMGCKG	1 cut(s)	830
MspI	CCGG	4 cut(s)	400, 447, 1193, 1287
MspR9I	CCNGG	4 cut(s)	72, 401, 1188, 1203
Mva1269I	GAATGC	1 cut(s)	1174
MvaI	CCWGG	3 cut(s)	72, 1188, 1203
MvnI	CGCG	1 cut(s)	85
MwoI	GCNNNNNNNGC	3 cut(s)	36, 114, 641
NaeI	GCCGGC	1 cut(s)	1194
NciI	CCSGG	1 cut(s)	401
NcoI	CCATGG	1 cut(s)	894
NdeI	CATATG	2 cut(s)	1069, 1077
NdeII	GATC	9 cut(s)	154, 411, 415, 544, 898, 951, 1220, 1238, 1289
NgoMIV	GCCGGC	1 cut(s)	1192
NlaIII	CATG	9 cut(s)	266, 383, 563, 603, 773, 898, 1027, 1040, 1127
NlaIV	GGNNCC	5 cut(s)	468, 900, 916, 942, 1197
NmuCI	GTSAC	1 cut(s)	323
NspI	RCATGY	2 cut(s)	383, 603
OliI	CACNNNNGTG	1 cut(s)	1315
PaeR7I	CTCGAG	1 cut(s)	786
PceI	AGGCCT	2 cut(s)	70, 709
PciI	ACATGT	1 cut(s)	379
PcsI	WCGNNNNNNNCGW	1 cut(s)	82
PctI	GAATGC	1 cut(s)	1174
PdiI	GCCGGC	1 cut(s)	1194
PfeI	GAWTC	4 cut(s)	296, 572, 728, 1268
PfoI	TCCNGGA	1 cut(s)	399
PkrI	GCNGC	4 cut(s)	646, 832, 993, 1137
PleI	GAGTC	1 cut(s)	412
PpsI	GAGTC	1 cut(s)	412
Ppu21I	YACGTR	1 cut(s)	502
PscI	ACATGT	1 cut(s)	379
Psp1406I	AACGTT	1 cut(s)	132
Psp6I	CCWGG	3 cut(s)	70, 1186, 1201
PspFI	CCCAGC	1 cut(s)	826
PspGI	CCWGG	3 cut(s)	70, 1186, 1201
PspN4I	GGNNCC	5 cut(s)	468, 900, 916, 942, 1197
PspPI	GGNCC	3 cut(s)	318, 1190, 1259
PspXI	VCTCGAGB	1 cut(s)	786
PsrI	GAACNNNNNNTAC	2 cut(s)	1151, 1183
PstI	CTGCAG	2 cut(s)	389, 649
PstNI	CAGNNNCTG	1 cut(s)	1241
PsuI	RGATCY	5 cut(s)	154, 898, 1220, 1238, 1289
PvuII	CAGCTG	1 cut(s)	830
RsaI	GTAC	3 cut(s)	588, 1100, 1169
RsaNI	GTAC	3 cut(s)	587, 1099, 1168
RseI	CAYNNNNRTG	2 cut(s)	1035, 1315
SaqAI	TTAA	3 cut(s)	90, 438, 695
SatI	GCNGC	4 cut(s)	645, 831, 992, 1136
Sau3AI	GATC	9 cut(s)	154, 411, 415, 544, 898, 951, 1220, 1238, 1289
Sau96I	GGNCC	3 cut(s)	318, 1190, 1259
SchI	GAGTC	1 cut(s)	413
ScrFI	CCNGG	4 cut(s)	72, 401, 1188, 1203
SduI	GDGCHC	5 cut(s)	379, 740, 843, 919, 943
SfaNI	GCATC	5 cut(s)	70, 205, 444, 505, 1292
SfcI	CTRYAG	3 cut(s)	385, 645, 1128
Sfr274I	CTCGAG	1 cut(s)	786
SinI	GGWCC	1 cut(s)	1259
SlaI	CTCGAG	1 cut(s)	786
SmiMI	CAYNNNNRTG	2 cut(s)	1035, 1315
SmlI	CTYRAG	2 cut(s)	711, 786
SmoI	CTYRAG	2 cut(s)	711, 786
Sse9I	AATT	1 cut(s)	522
SseBI	AGGCCT	2 cut(s)	70, 709
SsiI	CCGC	4 cut(s)	761, 978, 1115, 1136
SspMI	CTAG	3 cut(s)	276, 750, 945
StuI	AGGCCT	2 cut(s)	70, 709
StyD4I	CCNGG	4 cut(s)	70, 399, 1186, 1201
StyI	CCWWGG	2 cut(s)	462, 894
TaaI	ACNGT	3 cut(s)	55, 1098, 1132
TaiI	ACGT	5 cut(s)	46, 116, 135, 504, 855
TaqI	TCGA	4 cut(s)	184, 414, 787, 929
TaqII	GACCGA	1 cut(s)	282
TasI	AATT	1 cut(s)	522
TauI	GCSGC	1 cut(s)	1138
TfiI	GAWTC	4 cut(s)	296, 572, 728, 1268
Tru1I	TTAA	3 cut(s)	90, 438, 695
Tru9I	TTAA	3 cut(s)	90, 438, 695
TscAI	CASTG	3 cut(s)	328, 426, 1137
TseFI	GTSAC	1 cut(s)	323
TseI	GCWGC	3 cut(s)	644, 830, 991
Tsp45I	GTSAC	1 cut(s)	323
TspDTI	ATGAA	4 cut(s)	291, 309, 443, 1172
TspGWI	ACGGA	3 cut(s)	36, 321, 565
TspRI	CASTG	3 cut(s)	328, 426, 1137
VneI	GTGCAC	1 cut(s)	839
VpaK11BI	GGWCC	1 cut(s)	1259
XapI	RAATTY	1 cut(s)	522
XceI	RCATGY	2 cut(s)	383, 603
XhoI	CTCGAG	1 cut(s)	786
XspI	CTAG	3 cut(s)	276, 750, 945

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.