Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0000929

Physical Location & Seq

Genomic Coordinates Forward (+)

749355 .. 754475

Gene Structure 5121 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005673

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1818 bp

ATGCCAGACCCACAAAGGTTTCTTAAAGCATACCTCCAATCTGTTGGCACAATGAATCTCCCTACAGCATTTGCCACTGGTGGTTATGCTGCAATGCAGAGAGTCTCAGATTGGAATCTTGACTTCGTAGAGCATAGTGAGCAAGCGAACAGGTGTCTGTTTTATAACAAAGCTCAACTTTCATCTGATACCGTCAAGACCCGATTTAACACGTTCGTCTTTGCAGAAGCGCGCGGCCCCCTCTATCTGAGAGAACCGAGAATAAAGAAGATCTCTTTGGTTTTTGCTGCAAACCCTGAAGCGCCATTTCTCTCTTTCTATCGTCCAGGTGATATGGCGCACAGGTTGCTCAGGAATGTGGAGGCAGATGGTTGGGAACGGTCAGACTTCCCCATCATCTGCGAGTCGTGCCTGGGTGATAATCCCTATGTTCGCATGACGAAAGCCGATTATGACAAGGAGTGCAAGACTTGTACTCGGCCGTTCACCGTTTTCCGGTGGAGGCCTGGCCGTGATGCCCGATTCAAGAAGACGGAGATTTGCCAGACGTGCAGTAAGTTGAAGAATGTCTGTCAAGTTTGCATCTTGGACCTGGAATATGGCTTGCCAGTACAGGTTCGAGACACTGCTATGGCTATCAACTCCACCGATGCGATTCCCAAGAGTGATGTCAATAGGGAGTTTTTTGCCGAGGAGCATGACCGAAAGGCTAGAGCCGGTATAGATTACGAATCTTCCTATGGGAAAGCTCGGCCCAGTGACACTATTCTGAAGCTTCAAAGAACAGCACCCTATTACAAAAGGAACAGAGCACATGTCTGCAGTTTCTACATTCGGGGTGAGTGCACAAGAGGAGCTGAGTGCCCTTACAGGCATGAAATGCCCATAACTGGGGAGTTGGCACAACAAAACATTAAAGATCGTTACTATGGAGTCAATGATCCAGTCGCGATGAAGCTACTGAACAAGGCTGGAGAGATGCCCTCCCTAGAACCTCCCGAGGATGAAAGCATCAGAACCCTATACGTGGGTGGGCTTGATGGGAGGATTACTGAGCAGGATCTAAGGGATAACTTTTATGCTCATGGTGAAATAGAGTCTGTTAGGATGGTACTCCAACGAGCTTGTGCTTTTGTAACCTACACAACAAGAGAAGGTGCAGAAAGGGCTGCAGAAGAACTCTCCAATAAACTGGTCATAAAGGGTTTGAGATTGAAGTTAATGTGGGGTAGGCCCCAAGCACCAAAACAGGACGGCACAGATGAAGCTAGGCAGCAGGCAGTGGCTCATAGTGGATTGTTGCCTCGAGCAGTGATATCACAACAGCAGAACCAAATACAAGACCAATATACACCAGTGCAGCACTACTACAACATGCCACCTCCACCATCTTCACAGGAGAGGACATTTTATCCATCAATGGATCCTCAAAGAATGGGTGCTGTTGTTCGATCTCAAGATGGAGCTCCAAGTGGGCCCACAGGGTCCGATGAGAACAAATCTGGTTCAGAGAGGCAGCATTATGCTTTTCAAACCATGGCTCCACCACATGGCCATTATCATCAGCAGCAGTTTTATCCTCCCCATTATACAGGTTATATGCCTCTGCCACCACCAGCTTACCAACAACAATACCCTCCGCAATATCATACTGCAGTGCCTCCACAACAGTCCTTGCCAATGGGCCAACAATACCAGCAGCATTCTGCAACACCCTCAGCTTCTACATCATCAGCACCCGCAGCTTCAAGTTCTGGACCTTCAGAGTCCACACCATCCGAATCTGGATCTGCACCAACTGCATCATCACAGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000387 GO:0000398 GO:0000974 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008380 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0017069 GO:0017070 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0034622 GO:0034641 GO:0036002 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0050896 GO:0051704 GO:0051707 GO:0065003 GO:0071006 GO:0071007 GO:0071012 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1 Torus

Protein Analysis

606

Amino Acids

68.2

Weight (kDa)

8.11

Isoelectric Point (pI)

63.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DAHP_synth_2	PF01474	2 - 52	8.1e-10	Class-II DAHP synthetase family
STL11_N	PF21369	131 - 219	2.8e-29	STL11, N-terminal
Torus	PF16131	244 - 304	1.8e-06	Torus domain
zf-CCCH_RBM22	PF25584	268 - 294	2.2e-11	RBM22 CCCH zinc finger domain
RRM_1	PF00076	341 - 399	2e-11	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000929)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07360 AT2G29580 AT5G04210 AT5G07060 AT5G07060
fragaria_vesca	FvH4_4g11590 FvH4_4g11590 FvH4_4g11590 FvH4_4g11590 FvH4_4g11590 FvH4_4g36530 FvH4_4g36530 FvH4_7g07370
malus_domestica	MD01G1110000.v1.1 MD07G1175800.v1.1 MD16G1006600.v1.1
prunus_persica	Prupe.2G214800_v2.0.a1 Prupe.8G143100_v2.0.a1 Prupe.8G143100_v2.0.a1 Prupe.8G143100_v2.0.a1
pyrus_communis	pycom01g13690 pycom07g17000 pycom16g00630
rosa_chinensis	RchiOBHm_Chr1g0337351 RchiOBHm_Chr4g0408701 RchiOBHm_Chr4g0446281
rosa_laevigata	RLG00000005673 RLG00000008640 RLG00000029280 RLG00000029283
rosa_multiflora	Rmu_co8341103.1_g000001 Rmu_co8350441.1_g000001 Rmu_co8408813.1_g000001 Rmu_co8519167.1_g000003 Rmu_co8522047.1_g000002 Rmu_sc0002266.1_g000007 Rmu_sc0003060.1_g000002 Rmu_sc0005878.1_g000023 Rmu_sc0021927.1_g000001
rosa_roxburghii	Rroxscaffold_4G00314450 Rroxscaffold_4G00314490 Rroxscaffold_5G00353060 Rroxscaffold_5G00386720
rosa_rugosa	Rorug01G0134600.1 Rorug01G0134800.1 Rorug04G0086900 Rorug04G0369600 Rorug04G0369600
rosa_samantha	Rh1AG153600 Rh1BG122900 Rh1BG123100 Rh1CG144600 Rh1DG161300 Rh1DG161500 Rh4AG431500 Rh4BG148400 Rh4BG440900 Rh4CG159100 Rh4CG458200 Rh4DG144000 Rh4DG439400
rosa_wichuraiana	Rw1G012580 Rw4G012370 Rw4G036850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	165
AccB7I	CCANNNNNTGG	1 cut(s)	1550
AccII	CGCG	3 cut(s)	232, 234, 950
AciI	CCGC	3 cut(s)	234, 1640, 1740
AclWI	GGATC	5 cut(s)	935, 1068, 1418, 1431, 1795
AcoI	YGGCCR	3 cut(s)	479, 508, 1552
AcuI	CTGAAG	3 cut(s)	318, 791, 1746
AfaI	GTAC	3 cut(s)	475, 612, 1113
AfiI	CCNNNNNNNGG	5 cut(s)	495, 890, 891, 1027, 1550
AflIII	ACRYGT	2 cut(s)	210, 814
AgsI	TTSAA	6 cut(s)	526, 562, 779, 1216, 1532, 1749
AjiI	CACGTC	1 cut(s)	549
AjnI	CCWGG	4 cut(s)	325, 411, 505, 591
AjuI	GAANNNNNNNTTGG	2 cut(s)	260, 292
AleI	CACNNNNGTG	1 cut(s)	1813
Alw21I	GWGCWC	3 cut(s)	814, 848, 1468
Alw26I	GTCTC	2 cut(s)	109, 615
Alw44I	GTGCAC	1 cut(s)	844
AlwI	GGATC	5 cut(s)	935, 1068, 1418, 1431, 1795
Ama87I	CYCGRG	2 cut(s)	998, 1305
AoxI	GGCC	9 cut(s)	235, 479, 503, 508, 752, 1232, 1475, 1552, 1684
ApaI	GGGCCC	1 cut(s)	1479
ApaLI	GTGCAC	1 cut(s)	844
ApeKI	GCWGC	9 cut(s)	89, 287, 1169, 1273, 1360, 1516, 1567, 1699, 1742
AspLEI	GCGC	4 cut(s)	232, 234, 304, 340
AspS9I	GGNCC	9 cut(s)	236, 589, 753, 1233, 1475, 1476, 1485, 1684, 1757
AsuHPI	GGTGA	5 cut(s)	341, 428, 478, 851, 1100
AvaI	CYCGRG	2 cut(s)	998, 1305
AvaII	GGWCC	3 cut(s)	589, 1485, 1757
BaeGI	GKGCMC	3 cut(s)	848, 866, 1479
BalI	TGGCCA	1 cut(s)	1554
BamHI	GGATCC	1 cut(s)	1423
BanII	GRGCYC	2 cut(s)	1468, 1479
BbsI	GAAGAC	1 cut(s)	536
Bbv12I	GWGCWC	3 cut(s)	814, 848, 1468
BbvCI	CCTCAGC	1 cut(s)	1717
BbvI	GCAGC	9 cut(s)	76, 274, 1156, 1285, 1372, 1528, 1579, 1711, 1754
BccI	CCATC	8 cut(s)	362, 401, 1034, 1102, 1396, 1423, 1454, 1783
BceAI	ACGGC	3 cut(s)	466, 495, 1270
BciT130I	CCWGG	4 cut(s)	327, 413, 507, 593
BcoDI	GTCTC	2 cut(s)	109, 615
BfaI	CTAG	3 cut(s)	711, 989, 1269
BfmI	CTRYAG	4 cut(s)	63, 820, 1170, 1653
BfoI	RGCGCY	1 cut(s)	305
BglII	AGATCT	1 cut(s)	270
Bme1390I	CCNGG	4 cut(s)	327, 413, 507, 593
Bme18I	GGWCC	3 cut(s)	589, 1485, 1757
BmeT110I	CYCGRG	2 cut(s)	998, 1305
BmgBI	CACGTC	1 cut(s)	549
BmgT120I	GGNCC	9 cut(s)	236, 589, 753, 1233, 1475, 1476, 1485, 1684, 1757
BmiI	GGNNCC	6 cut(s)	238, 1235, 1425, 1477, 1486, 1542
BmrFI	CCNGG	4 cut(s)	327, 413, 507, 593
BmrI	ACTGGG	2 cut(s)	750, 900
BmsI	GCATC	6 cut(s)	505, 591, 640, 969, 1020, 1811
BmuI	ACTGGG	2 cut(s)	750, 900
BpiI	GAAGAC	1 cut(s)	536
BplI	GAGNNNNNCTC	2 cut(s)	968, 1000
BpmI	CTGGAG	1 cut(s)	993
Bpu10I	CCTNAGC	2 cut(s)	350, 1717
BpuEI	CTTGAG	1 cut(s)	1440
BsaAI	YACGTR	1 cut(s)	1027
BsaBI	GATNNNNATC	1 cut(s)	114
BsaJI	CCNNGG	4 cut(s)	412, 690, 999, 1536
BsaWI	WCCGGW	1 cut(s)	495
BsaXI	ACNNNNNCTCC	2 cut(s)	1525, 1555
Bsc4I	CCNNNNNNNGG	5 cut(s)	495, 890, 891, 1027, 1550
Bse118I	RCCGGY	1 cut(s)	716
Bse1I	ACTGG	7 cut(s)	82, 608, 756, 895, 944, 1197, 1355
Bse3DI	GCAATG	1 cut(s)	99
Bse8I	GATNNNNATC	1 cut(s)	114
BseBI	CCWGG	4 cut(s)	327, 413, 507, 593
BseDI	CCNNGG	4 cut(s)	412, 690, 999, 1536
BseGI	GGATG	3 cut(s)	1009, 1113, 1775
BseJI	GATNNNNATC	1 cut(s)	114
BseLI	CCNNNNNNNGG	5 cut(s)	495, 890, 891, 1027, 1550
BseMI	GCAATG	1 cut(s)	99
BseMII	CTCAG	6 cut(s)	120, 239, 364, 849, 1044, 1731
BseNI	ACTGG	7 cut(s)	82, 608, 756, 895, 944, 1197, 1355
BsePI	GCGCGC	1 cut(s)	230
BseRI	GAGGAG	2 cut(s)	707, 867
BseSI	GKGCMC	3 cut(s)	848, 866, 1479
BseX3I	CGGCCG	1 cut(s)	479
BseXI	GCAGC	9 cut(s)	76, 274, 1156, 1285, 1372, 1528, 1579, 1711, 1754
BsgI	GTGCAG	4 cut(s)	571, 1179, 1379, 1776
Bsh1236I	CGCG	3 cut(s)	232, 234, 950
Bsh1285I	CGRYCG	1 cut(s)	482
BshFI	GGCC	9 cut(s)	237, 481, 505, 510, 754, 1234, 1477, 1554, 1686
BsiEI	CGRYCG	1 cut(s)	482
BsiHKAI	GWGCWC	3 cut(s)	814, 848, 1468
BsiHKCI	CYCGRG	2 cut(s)	998, 1305
BsiSI	CCGG	2 cut(s)	496, 717
BslI	CCNNNNNNNGG	5 cut(s)	495, 890, 891, 1027, 1550
BsmAI	GTCTC	2 cut(s)	109, 615
BsmI	GAATGC	1 cut(s)	1702
BsnI	GGCC	9 cut(s)	237, 481, 505, 510, 754, 1234, 1477, 1554, 1686
BsoBI	CYCGRG	2 cut(s)	998, 1305
Bsp120I	GGGCCC	1 cut(s)	1475
Bsp1286I	GDGCHC	5 cut(s)	814, 848, 866, 1468, 1479
Bsp143I	GATC	7 cut(s)	270, 919, 940, 1060, 1423, 1451, 1787
Bsp19I	CCATGG	1 cut(s)	1536
Bsp68I	TCGCGA	1 cut(s)	950
BspACI	CCGC	3 cut(s)	234, 1640, 1740
BspANI	GGCC	9 cut(s)	237, 481, 505, 510, 754, 1234, 1477, 1554, 1686
BspCNI	CTCAG	6 cut(s)	119, 240, 363, 850, 1045, 1730
BspFNI	CGCG	3 cut(s)	232, 234, 950
BspLI	GGNNCC	6 cut(s)	238, 1235, 1425, 1477, 1486, 1542
BspMAI	CTGCAG	3 cut(s)	824, 1174, 1657
BspPI	GGATC	5 cut(s)	935, 1068, 1418, 1431, 1795
BsrDI	GCAATG	1 cut(s)	99
BsrFI	RCCGGY	1 cut(s)	716
BsrI	ACTGG	7 cut(s)	82, 608, 756, 895, 944, 1197, 1355
BssAI	RCCGGY	1 cut(s)	716
BssECI	CCNNGG	4 cut(s)	412, 690, 999, 1536
BssHII	GCGCGC	1 cut(s)	230
BssMI	GATC	7 cut(s)	270, 919, 940, 1060, 1423, 1451, 1787
BssT1I	CCWWGG	1 cut(s)	1536
Bst2UI	CCWGG	4 cut(s)	327, 413, 507, 593
Bst4CI	ACNGT	4 cut(s)	193, 381, 490, 1671
BstAPI	GCANNNNNTGC	3 cut(s)	346, 880, 1799
BstBAI	YACGTR	1 cut(s)	1027
BstC8I	GCNNGC	4 cut(s)	144, 232, 605, 1278
BstDEI	CTNAG	7 cut(s)	106, 248, 350, 858, 1053, 1064, 1717
BstDSI	CCRYGG	1 cut(s)	1536
BstF5I	GGATG	3 cut(s)	1009, 1113, 1775
BstFNI	CGCG	3 cut(s)	232, 234, 950
BstH2I	RGCGCY	1 cut(s)	305
BstHHI	GCGC	4 cut(s)	232, 234, 304, 340
BstKTI	GATC	7 cut(s)	273, 922, 943, 1063, 1426, 1454, 1790
BstMAI	GTCTC	2 cut(s)	109, 615
BstMBI	GATC	7 cut(s)	270, 919, 940, 1060, 1423, 1451, 1787
BstMCI	CGRYCG	1 cut(s)	482
BstMWI	GCNNNNNNNGC	8 cut(s)	139, 346, 408, 549, 880, 1166, 1742, 1799
BstNI	CCWGG	4 cut(s)	327, 413, 507, 593
BstNSI	RCATGY	2 cut(s)	818, 1378
BstSCI	CCNGG	4 cut(s)	325, 411, 505, 591
BstSFI	CTRYAG	4 cut(s)	63, 820, 1170, 1653
BstSLI	GKGCMC	3 cut(s)	848, 866, 1479
BstUI	CGCG	3 cut(s)	232, 234, 950
BstV1I	GCAGC	9 cut(s)	76, 274, 1156, 1285, 1372, 1528, 1579, 1711, 1754
BstV2I	GAAGAC	1 cut(s)	536
BstX2I	RGATCY	4 cut(s)	270, 1060, 1423, 1787
BstXI	CCANNNNNNTGG	2 cut(s)	44, 1192
BstYI	RGATCY	4 cut(s)	270, 1060, 1423, 1787
BstZI	CGGCCG	1 cut(s)	479
BsuRI	GGCC	9 cut(s)	237, 481, 505, 510, 754, 1234, 1477, 1554, 1686
BtgI	CCRYGG	1 cut(s)	1536
BtgZI	GCGATG	1 cut(s)	965
BtrI	CACGTC	1 cut(s)	549
BtsCI	GGATG	3 cut(s)	1009, 1113, 1775
BtsI	GCAGTG	4 cut(s)	624, 1287, 1317, 1662
BtsIMutI	CAGTG	7 cut(s)	75, 624, 763, 1287, 1317, 1362, 1662
BtuMI	TCGCGA	1 cut(s)	950
Cac8I	GCNNGC	4 cut(s)	144, 232, 605, 1278
CfoI	GCGC	4 cut(s)	232, 234, 304, 340
Cfr10I	RCCGGY	1 cut(s)	716
Cfr13I	GGNCC	9 cut(s)	236, 589, 753, 1233, 1475, 1476, 1485, 1684, 1757
Csp6I	GTAC	3 cut(s)	474, 611, 1112
CviAII	CATG	8 cut(s)	436, 698, 815, 875, 1085, 1375, 1537, 1550
CviQI	GTAC	3 cut(s)	474, 611, 1112
DdeI	CTNAG	7 cut(s)	106, 248, 350, 858, 1053, 1064, 1717
DpnI	GATC	7 cut(s)	272, 921, 942, 1062, 1425, 1453, 1789
DpnII	GATC	7 cut(s)	270, 919, 940, 1060, 1423, 1451, 1787
EaeI	YGGCCR	3 cut(s)	479, 508, 1552
EagI	CGGCCG	1 cut(s)	479
Ecl136II	GAGCTC	1 cut(s)	1466
EclXI	CGGCCG	1 cut(s)	479
Eco130I	CCWWGG	1 cut(s)	1536
Eco147I	AGGCCT	1 cut(s)	505
Eco24I	GRGCYC	2 cut(s)	1468, 1479
Eco32I	GATATC	1 cut(s)	1317
Eco47I	GGWCC	3 cut(s)	589, 1485, 1757
Eco52I	CGGCCG	1 cut(s)	479
Eco53kI	GAGCTC	1 cut(s)	1466
Eco57I	CTGAAG	3 cut(s)	318, 791, 1746
Eco88I	CYCGRG	2 cut(s)	998, 1305
EcoICRI	GAGCTC	1 cut(s)	1466
EcoO109I	RGGNCCY	1 cut(s)	1233
EcoRII	CCWGG	4 cut(s)	325, 411, 505, 591
EcoRV	GATATC	1 cut(s)	1317
EcoT14I	CCWWGG	1 cut(s)	1536
EcoT38I	GRGCYC	2 cut(s)	1468, 1479
ErhI	CCWWGG	1 cut(s)	1536
FaeI	CATG	8 cut(s)	439, 701, 818, 878, 1088, 1378, 1540, 1553
FalI	AAGNNNNNCTT	2 cut(s)	162, 194
FatI	CATG	8 cut(s)	435, 697, 814, 874, 1084, 1374, 1536, 1549
FauI	CCCGC	1 cut(s)	1747
FokI	GGATG	3 cut(s)	1016, 1120, 1762
FriOI	GRGCYC	2 cut(s)	1468, 1479
FspBI	CTAG	3 cut(s)	711, 989, 1269
GlaI	GCGC	4 cut(s)	231, 233, 303, 339
GsuI	CTGGAG	1 cut(s)	993
HaeII	RGCGCY	1 cut(s)	305
HaeIII	GGCC	9 cut(s)	237, 481, 505, 510, 754, 1234, 1477, 1554, 1686
HapII	CCGG	2 cut(s)	496, 717
HhaI	GCGC	4 cut(s)	232, 234, 304, 340
Hin1II	CATG	8 cut(s)	439, 701, 818, 878, 1088, 1378, 1540, 1553
Hin6I	GCGC	4 cut(s)	230, 232, 302, 338
HinP1I	GCGC	4 cut(s)	230, 232, 302, 338
HindIII	AAGCTT	1 cut(s)	773
HpaII	CCGG	2 cut(s)	496, 717
HphI	GGTGA	5 cut(s)	341, 428, 478, 851, 1100
Hpy166II	GTNNAC	3 cut(s)	486, 846, 1770
Hpy8I	GTNNAC	3 cut(s)	486, 846, 1770
HpyAV	CCTTC	2 cut(s)	1148, 1770
HpyCH4III	ACNGT	4 cut(s)	193, 381, 490, 1671
HpyCH4IV	ACGT	3 cut(s)	212, 548, 1026
HpyF10VI	GCNNNNNNNGC	8 cut(s)	139, 346, 408, 549, 880, 1166, 1742, 1799
HpyF3I	CTNAG	7 cut(s)	106, 248, 350, 858, 1053, 1064, 1717
HpySE526I	ACGT	3 cut(s)	212, 548, 1026
Hsp92II	CATG	8 cut(s)	439, 701, 818, 878, 1088, 1378, 1540, 1553
HspAI	GCGC	4 cut(s)	230, 232, 302, 338
Kzo9I	GATC	7 cut(s)	270, 919, 940, 1060, 1423, 1451, 1787
LmnI	GCTCC	5 cut(s)	694, 854, 1463, 1471, 1546
Lsp1109I	GCAGC	9 cut(s)	76, 274, 1156, 1285, 1372, 1528, 1579, 1711, 1754
LweI	GCATC	6 cut(s)	505, 591, 640, 969, 1020, 1811
MaeI	CTAG	3 cut(s)	711, 989, 1269
MaeII	ACGT	3 cut(s)	212, 548, 1026
MaeIII	GTNAC	3 cut(s)	758, 923, 1135
MalI	GATC	7 cut(s)	272, 921, 942, 1062, 1425, 1453, 1789
MboI	GATC	7 cut(s)	270, 919, 940, 1060, 1423, 1451, 1787
MboII	GAAGA	6 cut(s)	280, 541, 574, 726, 1187, 1383
MflI	RGATCY	4 cut(s)	270, 1060, 1423, 1787
MhlI	GDGCHC	5 cut(s)	814, 848, 866, 1468, 1479
MlsI	TGGCCA	1 cut(s)	1554
MluNI	TGGCCA	1 cut(s)	1554
MlyI	GAGTC	5 cut(s)	111, 413, 942, 1106, 1775
MmeI	TCCRAC	1 cut(s)	1141
Mox20I	TGGCCA	1 cut(s)	1554
MscI	TGGCCA	1 cut(s)	1554
MseI	TTAA	4 cut(s)	24, 207, 915, 1220
MslI	CAYNNNNRTG	2 cut(s)	629, 1813
Msp20I	TGGCCA	1 cut(s)	1554
MspI	CCGG	2 cut(s)	496, 717
MspR9I	CCNGG	4 cut(s)	327, 413, 507, 593
Mva1269I	GAATGC	1 cut(s)	1702
MvaI	CCWGG	4 cut(s)	327, 413, 507, 593
MvnI	CGCG	3 cut(s)	232, 234, 950
MwoI	GCNNNNNNNGC	8 cut(s)	139, 346, 408, 549, 880, 1166, 1742, 1799
NcoI	CCATGG	1 cut(s)	1536
NdeII	GATC	7 cut(s)	270, 919, 940, 1060, 1423, 1451, 1787
NlaIII	CATG	8 cut(s)	439, 701, 818, 878, 1088, 1378, 1540, 1553
NlaIV	GGNNCC	6 cut(s)	238, 1235, 1425, 1477, 1486, 1542
NmeAIII	GCCGAG	3 cut(s)	457, 715, 730
NmuCI	GTSAC	1 cut(s)	758
NruI	TCGCGA	1 cut(s)	950
NspI	RCATGY	2 cut(s)	818, 1378
OliI	CACNNNNGTG	1 cut(s)	1813
PaeR7I	CTCGAG	1 cut(s)	1305
PauI	GCGCGC	1 cut(s)	230
PceI	AGGCCT	1 cut(s)	505
PciI	ACATGT	1 cut(s)	814
PctI	GAATGC	1 cut(s)	1702
PfeI	GAWTC	6 cut(s)	55, 115, 522, 655, 731, 1781
PflMI	CCANNNNNTGG	1 cut(s)	1550
PleI	GAGTC	5 cut(s)	110, 412, 941, 1105, 1774
PpsI	GAGTC	5 cut(s)	110, 412, 941, 1105, 1774
Ppu21I	YACGTR	1 cut(s)	1027
PscI	ACATGT	1 cut(s)	814
PsiI	TTATAA	1 cut(s)	165
Psp124BI	GAGCTC	1 cut(s)	1468
Psp6I	CCWGG	4 cut(s)	325, 411, 505, 591
PspGI	CCWGG	4 cut(s)	325, 411, 505, 591
PspN4I	GGNNCC	6 cut(s)	238, 1235, 1425, 1477, 1486, 1542
PspOMI	GGGCCC	1 cut(s)	1475
PspPI	GGNCC	9 cut(s)	236, 589, 753, 1233, 1475, 1476, 1485, 1684, 1757
PspXI	VCTCGAGB	1 cut(s)	1305
PstI	CTGCAG	3 cut(s)	824, 1174, 1657
PsuI	RGATCY	4 cut(s)	270, 1060, 1423, 1787
PteI	GCGCGC	1 cut(s)	230
RruI	TCGCGA	1 cut(s)	950
RsaI	GTAC	3 cut(s)	475, 612, 1113
RsaNI	GTAC	3 cut(s)	474, 611, 1112
RseI	CAYNNNNRTG	2 cut(s)	629, 1813
SacI	GAGCTC	1 cut(s)	1468
SaqAI	TTAA	4 cut(s)	24, 207, 915, 1220
Sau3AI	GATC	7 cut(s)	270, 919, 940, 1060, 1423, 1451, 1787
Sau96I	GGNCC	9 cut(s)	236, 589, 753, 1233, 1475, 1476, 1485, 1684, 1757
SchI	GAGTC	5 cut(s)	111, 413, 942, 1106, 1775
ScrFI	CCNGG	4 cut(s)	327, 413, 507, 593
SduI	GDGCHC	5 cut(s)	814, 848, 866, 1468, 1479
SfaNI	GCATC	6 cut(s)	505, 591, 640, 969, 1020, 1811
SfcI	CTRYAG	4 cut(s)	63, 820, 1170, 1653
Sfr274I	CTCGAG	1 cut(s)	1305
SinI	GGWCC	3 cut(s)	589, 1485, 1757
SlaI	CTCGAG	1 cut(s)	1305
SmiMI	CAYNNNNRTG	2 cut(s)	629, 1813
SmlI	CTYRAG	2 cut(s)	1305, 1455
SmoI	CTYRAG	2 cut(s)	1305, 1455
SseBI	AGGCCT	1 cut(s)	505
SsiI	CCGC	3 cut(s)	234, 1640, 1740
SspMI	CTAG	3 cut(s)	711, 989, 1269
SstI	GAGCTC	1 cut(s)	1468
StuI	AGGCCT	1 cut(s)	505
StyD4I	CCNGG	4 cut(s)	325, 411, 505, 591
StyI	CCWWGG	1 cut(s)	1536
TaaI	ACNGT	4 cut(s)	193, 381, 490, 1671
TaiI	ACGT	3 cut(s)	215, 551, 1029
TaqI	TCGA	3 cut(s)	619, 1306, 1450
TaqII	GACCGA	1 cut(s)	717
TatI	WGTACW	2 cut(s)	473, 610
TauI	GCSGC	1 cut(s)	237
TfiI	GAWTC	6 cut(s)	55, 115, 522, 655, 731, 1781
Tru1I	TTAA	4 cut(s)	24, 207, 915, 1220
Tru9I	TTAA	4 cut(s)	24, 207, 915, 1220
TscAI	CASTG	7 cut(s)	82, 631, 763, 1287, 1317, 1362, 1662
TseFI	GTSAC	1 cut(s)	758
TseI	GCWGC	9 cut(s)	89, 287, 1169, 1273, 1360, 1516, 1567, 1699, 1742
Tsp45I	GTSAC	1 cut(s)	758
TspDTI	ATGAA	6 cut(s)	68, 171, 891, 968, 1020, 1278
TspGWI	ACGGA	1 cut(s)	548
TspRI	CASTG	7 cut(s)	82, 631, 763, 1287, 1317, 1362, 1662
Van91I	CCANNNNNTGG	1 cut(s)	1550
VneI	GTGCAC	1 cut(s)	844
VpaK11BI	GGWCC	3 cut(s)	589, 1485, 1757
XceI	RCATGY	2 cut(s)	818, 1378
XhoI	CTCGAG	1 cut(s)	1305
XspI	CTAG	3 cut(s)	711, 989, 1269

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.