Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0000929

Physical Location & Seq

Genomic Coordinates Forward (+)

502314 .. 505215

Gene Structure 2902 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1006600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1395 bp

ATGGCTCATAGGCTGCTGAGAAATCCGGAGGCGGACGGTTGGGAACGATCGGACTTTCCCATCATCTGCGAATCATGCCTCGGCGACAACCCCTATATCCGGATGACAAGAGCCGAATACGACAAGGAGTGCAAGATTTGCAGCCGTCCTTTCACGGTGTTTCGGTGGAGGCCCGGCCGCGACGCCCGGTACAAGAAGACGGAGATTTGCCAGACTTGCTGCAAGTTGAAAAACGTCTGCCAAGTCTGCCTCTTGGATCTCGAATACGGCTTGCCGGTTCAGGTTCGAGACTCCGCTCTCGCCATTGATTCCAACGATTCCATCCCTAGAAGCGACGTCAATCGCGAGTTCTTCGCCGAGGAGCACGATCGAAGGGCTAGGGCTGGCATAGATTACGAGTCTTCGTACGGGAAGGTGCGGCCGAACGACACAATTCTGAAGCTTCAAAGGACGGAGCCGTATTACAAGAGGAACCGAGCTCATGTCTGCAGTTTCTACATTCGGGGTGAGTGCACGAGAGGTGCCGAGTGCCCTTACCGGCACGAGATGCCAGTTACCGGGGAATTGTCACAACAGAACATCAAAGACCGTTATTACGGAGTCAATGATCCAGTGGCAATGAAGCTGCTTAACAAGGCTGGAGAGATGCCCACCCTGGAACCACCAGAGGATGAGAGCATTAGAACGCTATATGTGGGCGGGATTGATGCGAGAATATCTGAGCAGGATTTGAGGGATCATTTTTACGCTCATGGTGAAATAGAATCCATAAGGATGGTGCTCCAAAAAGCATGCGCGTTTGTAACATACACGACGAGAGAAGGCGCAGAAAAGGCGGCTGAAGAACTCTATAGTAAACTGGTAGTGAAGGGTTTGAGATTGAAGTTACTCTGGGGAAGGCCCCAAGCACCAAAAGAGGAACCTGAGGGCGCAAATGGAGCTACGCAGCAGGCGTTAGCTCATGGTGGATTGTTGCCTCGAGCAGTCATATCCCAACAGCACAACCAATTACAACAGGACCAATATGCTCCAGTGCACTTGTACAACATCCCACCTCCACCCTCCCAGGAGAGAACATTTTATCCTTCGATGGATCCTCAAAGGATGGGTGCCCTCATCCCGTCCCAGGACAGGATCCCCAGTGTGTCTGCGGGGTTGGGCGAGAAGAATGCCAATTTCGATAGGCAGCAGCATTATACATTTCAAACTGCGGCTCCACCGCAAGGTCAATATCATCAGCAATTTTATCCTCCTCCGTATGGGTATATGCCGGCTCCACCACAACCTTACTCGCAGGATCATGATGCAGTGCCTCCGCCACCATCGTTACCAATGGACCAACAGCACCAGCATTCTGCAACACCATCTGAGTCTGGTTCAACTGTTGAAACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000387 GO:0000398 GO:0000974 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008380 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0017069 GO:0017070 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0034622 GO:0034641 GO:0036002 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0050896 GO:0051704 GO:0051707 GO:0065003 GO:0071006 GO:0071007 GO:0071012 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1 Torus

Protein Analysis

465

Amino Acids

52.79

Weight (kDa)

6.29

Isoelectric Point (pI)

65.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
STL11_N	PF21369	20 - 108	1.4e-29	STL11, N-terminal
Torus	PF16131	156 - 193	2.3e-06	Torus domain
zf-CCCH_RBM22	PF25584	157 - 183	1.6e-11	RBM22 CCCH zinc finger domain
RRM_1	PF00076	230 - 286	9.4e-12	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000929)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07360 AT2G29580 AT5G04210 AT5G07060 AT5G07060
fragaria_vesca	FvH4_4g11590 FvH4_4g11590 FvH4_4g11590 FvH4_4g11590 FvH4_4g11590 FvH4_4g36530 FvH4_4g36530 FvH4_7g07370
malus_domestica	MD01G1110000.v1.1 MD07G1175800.v1.1 MD16G1006600.v1.1
prunus_persica	Prupe.2G214800_v2.0.a1 Prupe.8G143100_v2.0.a1 Prupe.8G143100_v2.0.a1 Prupe.8G143100_v2.0.a1
pyrus_communis	pycom01g13690 pycom07g17000 pycom16g00630
rosa_chinensis	RchiOBHm_Chr1g0337351 RchiOBHm_Chr4g0408701 RchiOBHm_Chr4g0446281
rosa_laevigata	RLG00000005673 RLG00000008640 RLG00000029280 RLG00000029283
rosa_multiflora	Rmu_co8341103.1_g000001 Rmu_co8350441.1_g000001 Rmu_co8408813.1_g000001 Rmu_co8519167.1_g000003 Rmu_co8522047.1_g000002 Rmu_sc0002266.1_g000007 Rmu_sc0003060.1_g000002 Rmu_sc0005878.1_g000023 Rmu_sc0021927.1_g000001
rosa_roxburghii	Rroxscaffold_4G00314450 Rroxscaffold_4G00314490 Rroxscaffold_5G00353060 Rroxscaffold_5G00386720
rosa_rugosa	Rorug01G0134600.1 Rorug01G0134800.1 Rorug04G0086900 Rorug04G0369600 Rorug04G0369600
rosa_samantha	Rh1AG153600 Rh1BG122900 Rh1BG123100 Rh1CG144600 Rh1DG161300 Rh1DG161500 Rh4AG431500 Rh4BG148400 Rh4BG440900 Rh4CG159100 Rh4CG458200 Rh4DG144000 Rh4DG439400
rosa_wichuraiana	Rw1G012580 Rw4G012370 Rw4G036850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	339
AccB1I	GGYRCC	2 cut(s)	521, 1109
AccBSI	CCGCTC	1 cut(s)	296
AccII	CGCG	3 cut(s)	180, 345, 797
AccIII	TCCGGA	2 cut(s)	25, 99
AclWI	GGATC	8 cut(s)	264, 602, 744, 1088, 1101, 1129, 1142, 1305
AcoI	YGGCCR	2 cut(s)	175, 419
AcuI	CTGAAG	2 cut(s)	458, 861
AcyI	GRCGYC	2 cut(s)	183, 336
AfaI	GTAC	3 cut(s)	191, 407, 1043
AfiI	CCNNNNNNNGG	6 cut(s)	99, 557, 1126, 1131, 1223, 1259
AgsI	TTSAA	6 cut(s)	229, 446, 883, 1205, 1380, 1388
AjnI	CCWGG	3 cut(s)	654, 1065, 1125
AloI	GAACNNNNNNTCC	2 cut(s)	1066, 1098
AluBI	AGCT	5 cut(s)	442, 479, 625, 941, 959
AluI	AGCT	5 cut(s)	442, 479, 625, 941, 959
Alw21I	GWGCWC	5 cut(s)	366, 481, 515, 783, 1038
Alw26I	GTCTC	1 cut(s)	282
Alw44I	GTGCAC	2 cut(s)	511, 1034
AlwI	GGATC	8 cut(s)	264, 602, 744, 1088, 1101, 1129, 1142, 1305
Ama87I	CYCGRG	1 cut(s)	978
Aor13HI	TCCGGA	2 cut(s)	25, 99
AoxI	GGCC	4 cut(s)	170, 175, 419, 899
ApaLI	GTGCAC	2 cut(s)	511, 1034
ApeKI	GCWGC	7 cut(s)	13, 141, 219, 625, 946, 1186, 1189
AspLEI	GCGC	3 cut(s)	797, 827, 932
AspS9I	GGNCC	4 cut(s)	171, 900, 1018, 1336
AsuC2I	CCSGG	3 cut(s)	174, 187, 559
AsuHPI	GGTGA	2 cut(s)	518, 767
AvaI	CYCGRG	1 cut(s)	978
AvaII	GGWCC	2 cut(s)	1018, 1336
AxyI	CCTNAGG	1 cut(s)	924
BaeGI	GKGCMC	4 cut(s)	515, 533, 1038, 1114
BamHI	GGATCC	2 cut(s)	1093, 1134
BanI	GGYRCC	2 cut(s)	521, 1109
BanII	GRGCYC	1 cut(s)	481
BauI	CACGAG	2 cut(s)	514, 542
BbsI	GAAGAC	2 cut(s)	203, 393
Bbv12I	GWGCWC	5 cut(s)	366, 481, 515, 783, 1038
BbvI	GCAGC	6 cut(s)	153, 206, 612, 958, 1198, 1201
BccI	CCATC	7 cut(s)	68, 329, 769, 1084, 1099, 1330, 1372
BceAI	ACGGC	3 cut(s)	129, 283, 442
BcgI	CGANNNNNNTGC	2 cut(s)	1151, 1185
BciT130I	CCWGG	3 cut(s)	656, 1067, 1127
BcnI	CCSGG	3 cut(s)	174, 187, 559
BcoDI	GTCTC	1 cut(s)	282
BfaI	CTAG	2 cut(s)	327, 378
BfmI	CTRYAG	2 cut(s)	487, 850
Bme1390I	CCNGG	6 cut(s)	174, 187, 559, 656, 1067, 1127
Bme18I	GGWCC	2 cut(s)	1018, 1336
BmeT110I	CYCGRG	1 cut(s)	978
BmgT120I	GGNCC	4 cut(s)	171, 900, 1018, 1336
BmrFI	CCNGG	6 cut(s)	174, 187, 559, 656, 1067, 1127
BmrI	ACTGGG	1 cut(s)	1134
BmsI	GCATC	4 cut(s)	537, 636, 697, 1294
BmuI	ACTGGG	1 cut(s)	1134
BpiI	GAAGAC	2 cut(s)	203, 393
BpmI	CTGGAG	2 cut(s)	660, 1014
BpuMI	CCSGG	3 cut(s)	174, 187, 559
BsaHI	GRCGYC	2 cut(s)	183, 336
BsaJI	CCNNGG	6 cut(s)	79, 357, 558, 654, 1065, 1125
BsaWI	WCCGGW	2 cut(s)	25, 99
BsaXI	ACNNNNNCTCC	2 cut(s)	1198, 1228
Bsc4I	CCNNNNNNNGG	6 cut(s)	99, 557, 1126, 1131, 1223, 1259
Bse118I	RCCGGY	3 cut(s)	274, 537, 1270
Bse1I	ACTGG	5 cut(s)	551, 611, 864, 1031, 1140
Bse21I	CCTNAGG	1 cut(s)	924
Bse3DI	GCAATG	1 cut(s)	624
BseAI	TCCGGA	2 cut(s)	25, 99
BseBI	CCWGG	3 cut(s)	656, 1067, 1127
BseDI	CCNNGG	6 cut(s)	79, 357, 558, 654, 1065, 1125
BseGI	GGATG	7 cut(s)	108, 321, 676, 780, 1047, 1110, 1116
BseLI	CCNNNNNNNGG	6 cut(s)	99, 557, 1126, 1131, 1223, 1259
BseMI	GCAATG	1 cut(s)	624
BseMII	CTCAG	4 cut(s)	8, 711, 915, 1359
BseNI	ACTGG	5 cut(s)	551, 611, 864, 1031, 1140
BseRI	GAGGAG	2 cut(s)	374, 1242
BseSI	GKGCMC	4 cut(s)	515, 533, 1038, 1114
BseX3I	CGGCCG	2 cut(s)	175, 419
BseXI	GCAGC	6 cut(s)	153, 206, 612, 958, 1198, 1201
Bsh1236I	CGCG	3 cut(s)	180, 345, 797
Bsh1285I	CGRYCG	4 cut(s)	50, 178, 370, 422
BshFI	GGCC	4 cut(s)	172, 177, 421, 901
BshNI	GGYRCC	2 cut(s)	521, 1109
BsiEI	CGRYCG	4 cut(s)	50, 178, 370, 422
BsiHKAI	GWGCWC	5 cut(s)	366, 481, 515, 783, 1038
BsiHKCI	CYCGRG	1 cut(s)	978
BsiSI	CCGG	8 cut(s)	26, 100, 174, 187, 275, 538, 558, 1271
BsiWI	CGTACG	1 cut(s)	405
BslFI	GGGAC	1 cut(s)	1108
BslI	CCNNNNNNNGG	6 cut(s)	99, 557, 1126, 1131, 1223, 1259
BsmAI	GTCTC	1 cut(s)	282
BsmFI	GGGAC	1 cut(s)	1108
BsmI	GAATGC	2 cut(s)	1174, 1351
BsnI	GGCC	4 cut(s)	172, 177, 421, 901
BsoBI	CYCGRG	1 cut(s)	978
Bsp1286I	GDGCHC	7 cut(s)	366, 481, 515, 533, 783, 1038, 1114
Bsp13I	TCCGGA	2 cut(s)	25, 99
Bsp1407I	TGTACA	1 cut(s)	1041
Bsp143I	GATC	8 cut(s)	47, 256, 367, 607, 736, 1093, 1134, 1297
Bsp68I	TCGCGA	1 cut(s)	345
BspANI	GGCC	4 cut(s)	172, 177, 421, 901
BspCNI	CTCAG	4 cut(s)	9, 712, 916, 1360
BspEI	TCCGGA	2 cut(s)	25, 99
BspFNI	CGCG	3 cut(s)	180, 345, 797
BspHI	TCATGA	1 cut(s)	1300
BspMAI	CTGCAG	1 cut(s)	491
BspPI	GGATC	8 cut(s)	264, 602, 744, 1088, 1101, 1129, 1142, 1305
BspT107I	GGYRCC	2 cut(s)	521, 1109
BsrBI	CCGCTC	1 cut(s)	296
BsrDI	GCAATG	1 cut(s)	624
BsrFI	RCCGGY	3 cut(s)	274, 537, 1270
BsrGI	TGTACA	1 cut(s)	1041
BsrI	ACTGG	5 cut(s)	551, 611, 864, 1031, 1140
BssAI	RCCGGY	3 cut(s)	274, 537, 1270
BssECI	CCNNGG	6 cut(s)	79, 357, 558, 654, 1065, 1125
BssMI	GATC	8 cut(s)	47, 256, 367, 607, 736, 1093, 1134, 1297
BssNI	GRCGYC	2 cut(s)	183, 336
BssSI	CACGAG	2 cut(s)	514, 542
Bst2BI	CACGAG	2 cut(s)	514, 542
Bst2UI	CCWGG	3 cut(s)	656, 1067, 1127
Bst4CI	ACNGT	4 cut(s)	38, 157, 590, 1384
BstACI	GRCGYC	2 cut(s)	183, 336
BstAPI	GCANNNNNTGC	2 cut(s)	138, 547
BstAUI	TGTACA	1 cut(s)	1041
BstC8I	GCNNGC	5 cut(s)	272, 385, 793, 951, 1272
BstDEI	CTNAG	4 cut(s)	17, 720, 924, 1368
BstF5I	GGATG	7 cut(s)	108, 321, 676, 780, 1047, 1110, 1116
BstFNI	CGCG	3 cut(s)	180, 345, 797
BstHHI	GCGC	3 cut(s)	797, 827, 932
BstKTI	GATC	8 cut(s)	50, 259, 370, 610, 739, 1096, 1137, 1300
BstMAI	GTCTC	1 cut(s)	282
BstMBI	GATC	8 cut(s)	47, 256, 367, 607, 736, 1093, 1134, 1297
BstMCI	CGRYCG	4 cut(s)	50, 178, 370, 422
BstMWI	GCNNNNNNNGC	7 cut(s)	75, 138, 216, 246, 547, 833, 938
BstNI	CCWGG	3 cut(s)	656, 1067, 1127
BstNSI	RCATGY	1 cut(s)	795
BstSCI	CCNGG	6 cut(s)	172, 185, 557, 654, 1065, 1125
BstSFI	CTRYAG	2 cut(s)	487, 850
BstSLI	GKGCMC	4 cut(s)	515, 533, 1038, 1114
BstUI	CGCG	3 cut(s)	180, 345, 797
BstV1I	GCAGC	6 cut(s)	153, 206, 612, 958, 1198, 1201
BstV2I	GAAGAC	2 cut(s)	203, 393
BstX2I	RGATCY	3 cut(s)	256, 1093, 1134
BstXI	CCANNNNNNTGG	1 cut(s)	775
BstYI	RGATCY	3 cut(s)	256, 1093, 1134
BstZI	CGGCCG	2 cut(s)	175, 419
Bsu36I	CCTNAGG	1 cut(s)	924
BsuRI	GGCC	4 cut(s)	172, 177, 421, 901
BtsCI	GGATG	7 cut(s)	108, 321, 676, 780, 1047, 1110, 1116
BtsI	GCAGTG	1 cut(s)	1314
BtsIMutI	CAGTG	4 cut(s)	618, 1038, 1147, 1314
BtuMI	TCGCGA	1 cut(s)	345
Cac8I	GCNNGC	5 cut(s)	272, 385, 793, 951, 1272
CciI	TCATGA	1 cut(s)	1300
CfoI	GCGC	3 cut(s)	797, 827, 932
Cfr10I	RCCGGY	3 cut(s)	274, 537, 1270
Cfr13I	GGNCC	4 cut(s)	171, 900, 1018, 1336
CseI	GACGC	1 cut(s)	191
Csp6I	GTAC	3 cut(s)	190, 406, 1042
CviAII	CATG	6 cut(s)	75, 482, 752, 792, 962, 1301
CviQI	GTAC	3 cut(s)	190, 406, 1042
DdeI	CTNAG	4 cut(s)	17, 720, 924, 1368
DpnI	GATC	8 cut(s)	49, 258, 369, 609, 738, 1095, 1136, 1299
DpnII	GATC	8 cut(s)	47, 256, 367, 607, 736, 1093, 1134, 1297
EaeI	YGGCCR	2 cut(s)	175, 419
EagI	CGGCCG	2 cut(s)	175, 419
EciI	GGCGGA	2 cut(s)	47, 1305
Ecl136II	GAGCTC	1 cut(s)	479
EclXI	CGGCCG	2 cut(s)	175, 419
Eco24I	GRGCYC	1 cut(s)	481
Eco47I	GGWCC	2 cut(s)	1018, 1336
Eco52I	CGGCCG	2 cut(s)	175, 419
Eco53kI	GAGCTC	1 cut(s)	479
Eco57I	CTGAAG	2 cut(s)	458, 861
Eco81I	CCTNAGG	1 cut(s)	924
Eco88I	CYCGRG	1 cut(s)	978
EcoICRI	GAGCTC	1 cut(s)	479
EcoO109I	RGGNCCY	1 cut(s)	900
EcoRII	CCWGG	3 cut(s)	654, 1065, 1125
EcoT38I	GRGCYC	1 cut(s)	481
FaeI	CATG	6 cut(s)	78, 485, 755, 795, 965, 1304
FaqI	GGGAC	1 cut(s)	1108
FatI	CATG	6 cut(s)	74, 481, 751, 791, 961, 1300
FauI	CCCGC	2 cut(s)	692, 1144
FokI	GGATG	7 cut(s)	115, 308, 683, 787, 1034, 1103, 1117
FriOI	GRGCYC	1 cut(s)	481
FspBI	CTAG	2 cut(s)	327, 378
GlaI	GCGC	3 cut(s)	796, 826, 931
GsuI	CTGGAG	2 cut(s)	660, 1014
HaeIII	GGCC	4 cut(s)	172, 177, 421, 901
HapII	CCGG	8 cut(s)	26, 100, 174, 187, 275, 538, 558, 1271
HgaI	GACGC	1 cut(s)	191
HhaI	GCGC	3 cut(s)	797, 827, 932
Hin1I	GRCGYC	2 cut(s)	183, 336
Hin1II	CATG	6 cut(s)	78, 485, 755, 795, 965, 1304
Hin6I	GCGC	3 cut(s)	795, 825, 930
HinP1I	GCGC	3 cut(s)	795, 825, 930
HindIII	AAGCTT	1 cut(s)	440
HinfI	GANTC	8 cut(s)	71, 290, 308, 317, 398, 600, 764, 1370
HpaII	CCGG	8 cut(s)	26, 100, 174, 187, 275, 538, 558, 1271
HphI	GGTGA	2 cut(s)	518, 767
Hpy166II	GTNNAC	3 cut(s)	513, 857, 1036
Hpy188I	TCNGA	4 cut(s)	52, 438, 721, 1369
Hpy188III	TCNNGA	6 cut(s)	26, 100, 260, 287, 344, 1301
Hpy8I	GTNNAC	3 cut(s)	513, 857, 1036
Hpy99I	CGWCG	3 cut(s)	185, 338, 817
HpyAV	CCTTC	6 cut(s)	366, 406, 815, 862, 891, 1095
HpyCH4III	ACNGT	4 cut(s)	38, 157, 590, 1384
HpyCH4IV	ACGT	2 cut(s)	234, 336
HpyCH4V	TGCA	8 cut(s)	132, 141, 222, 489, 513, 1036, 1307, 1358
HpyF10VI	GCNNNNNNNGC	7 cut(s)	75, 138, 216, 246, 547, 833, 938
HpyF3I	CTNAG	4 cut(s)	17, 720, 924, 1368
HpySE526I	ACGT	2 cut(s)	234, 336
Hsp92I	GRCGYC	2 cut(s)	183, 336
Hsp92II	CATG	6 cut(s)	78, 485, 755, 795, 965, 1304
HspAI	GCGC	3 cut(s)	795, 825, 930
Kpn2I	TCCGGA	2 cut(s)	25, 99
KroI	GCCGGC	1 cut(s)	1270
KroNI	GCCGGC	1 cut(s)	1272
Kzo9I	GATC	8 cut(s)	47, 256, 367, 607, 736, 1093, 1134, 1297
LmnI	GCTCC	7 cut(s)	361, 454, 786, 938, 1033, 1219, 1279
Lsp1109I	GCAGC	6 cut(s)	153, 206, 612, 958, 1198, 1201
LweI	GCATC	4 cut(s)	537, 636, 697, 1294
MaeI	CTAG	2 cut(s)	327, 378
MaeII	ACGT	2 cut(s)	234, 336
MaeIII	GTNAC	5 cut(s)	553, 567, 802, 885, 1326
MalI	GATC	8 cut(s)	49, 258, 369, 609, 738, 1095, 1136, 1299
MbiI	CCGCTC	1 cut(s)	296
MboI	GATC	8 cut(s)	47, 256, 367, 607, 736, 1093, 1134, 1297
MboII	GAAGA	5 cut(s)	208, 343, 393, 854, 1177
MflI	RGATCY	3 cut(s)	256, 1093, 1134
MhlI	GDGCHC	7 cut(s)	366, 481, 515, 533, 783, 1038, 1114
MluCI	AATT	5 cut(s)	432, 563, 1007, 1174, 1241
MlyI	GAGTC	4 cut(s)	284, 407, 609, 1379
MmeI	TCCRAC	1 cut(s)	336
MroI	TCCGGA	2 cut(s)	25, 99
MroNI	GCCGGC	1 cut(s)	1270
MseI	TTAA	1 cut(s)	630
MslI	CAYNNNNRTG	1 cut(s)	773
MspI	CCGG	8 cut(s)	26, 100, 174, 187, 275, 538, 558, 1271
MspR9I	CCNGG	6 cut(s)	174, 187, 559, 656, 1067, 1127
Mva1269I	GAATGC	2 cut(s)	1174, 1351
MvaI	CCWGG	3 cut(s)	656, 1067, 1127
MvnI	CGCG	3 cut(s)	180, 345, 797
MwoI	GCNNNNNNNGC	7 cut(s)	75, 138, 216, 246, 547, 833, 938
NaeI	GCCGGC	1 cut(s)	1272
NciI	CCSGG	3 cut(s)	174, 187, 559
NdeII	GATC	8 cut(s)	47, 256, 367, 607, 736, 1093, 1134, 1297
NgoMIV	GCCGGC	1 cut(s)	1270
NlaIII	CATG	6 cut(s)	78, 485, 755, 795, 965, 1304
NmeAIII	GCCGAG	3 cut(s)	60, 382, 550
NmuCI	GTSAC	1 cut(s)	567
NruI	TCGCGA	1 cut(s)	345
NspI	RCATGY	1 cut(s)	795
PaeI	GCATGC	1 cut(s)	795
PaeR7I	CTCGAG	1 cut(s)	978
PagI	TCATGA	1 cut(s)	1300
PcsI	WCGNNNNNNNCGW	2 cut(s)	342, 950
PctI	GAATGC	2 cut(s)	1174, 1351
PdiI	GCCGGC	1 cut(s)	1272
PfeI	GAWTC	4 cut(s)	71, 308, 317, 764
Pfl23II	CGTACG	1 cut(s)	405
Ple19I	CGATCG	2 cut(s)	50, 370
PleI	GAGTC	4 cut(s)	284, 406, 608, 1378
PpsI	GAGTC	4 cut(s)	284, 406, 608, 1378
Psp124BI	GAGCTC	1 cut(s)	481
Psp6I	CCWGG	3 cut(s)	654, 1065, 1125
PspGI	CCWGG	3 cut(s)	654, 1065, 1125
PspLI	CGTACG	1 cut(s)	405
PspPI	GGNCC	4 cut(s)	171, 900, 1018, 1336
PspXI	VCTCGAGB	1 cut(s)	978
PstI	CTGCAG	1 cut(s)	491
PsuI	RGATCY	3 cut(s)	256, 1093, 1134
PvuI	CGATCG	2 cut(s)	50, 370
RruI	TCGCGA	1 cut(s)	345
RsaI	GTAC	3 cut(s)	191, 407, 1043
RsaNI	GTAC	3 cut(s)	190, 406, 1042
RseI	CAYNNNNRTG	1 cut(s)	773
SacI	GAGCTC	1 cut(s)	481
SaqAI	TTAA	1 cut(s)	630
Sau3AI	GATC	8 cut(s)	47, 256, 367, 607, 736, 1093, 1134, 1297
Sau96I	GGNCC	4 cut(s)	171, 900, 1018, 1336
SchI	GAGTC	4 cut(s)	284, 407, 609, 1379
ScrFI	CCNGG	6 cut(s)	174, 187, 559, 656, 1067, 1127
SduI	GDGCHC	7 cut(s)	366, 481, 515, 533, 783, 1038, 1114
SfaNI	GCATC	4 cut(s)	537, 636, 697, 1294
SfcI	CTRYAG	2 cut(s)	487, 850
Sfr274I	CTCGAG	1 cut(s)	978
SinI	GGWCC	2 cut(s)	1018, 1336
SlaI	CTCGAG	1 cut(s)	978
SmiMI	CAYNNNNRTG	1 cut(s)	773
SmlI	CTYRAG	1 cut(s)	978
SmoI	CTYRAG	1 cut(s)	978
SphI	GCATGC	1 cut(s)	795
Sse9I	AATT	5 cut(s)	432, 563, 1007, 1174, 1241
SspMI	CTAG	2 cut(s)	327, 378
SstI	GAGCTC	1 cut(s)	481
StyD4I	CCNGG	6 cut(s)	172, 185, 557, 654, 1065, 1125
TaaI	ACNGT	4 cut(s)	38, 157, 590, 1384
TaiI	ACGT	2 cut(s)	237, 339
TaqI	TCGA	6 cut(s)	261, 286, 370, 979, 1088, 1179
TasI	AATT	5 cut(s)	432, 563, 1007, 1174, 1241
TatI	WGTACW	1 cut(s)	1041
TauI	GCSGC	4 cut(s)	180, 421, 839, 1214
TfiI	GAWTC	4 cut(s)	71, 308, 317, 764
Tru1I	TTAA	1 cut(s)	630
Tru9I	TTAA	1 cut(s)	630
TscAI	CASTG	4 cut(s)	618, 1038, 1147, 1314
TseFI	GTSAC	1 cut(s)	567
TseI	GCWGC	7 cut(s)	13, 141, 219, 625, 946, 1186, 1189
Tsp45I	GTSAC	1 cut(s)	567
TspDTI	ATGAA	1 cut(s)	635
TspGWI	ACGGA	4 cut(s)	215, 467, 612, 1245
TspRI	CASTG	4 cut(s)	618, 1038, 1147, 1314
VneI	GTGCAC	2 cut(s)	511, 1034
VpaK11BI	GGWCC	2 cut(s)	1018, 1336
XceI	RCATGY	1 cut(s)	795
XhoI	CTCGAG	1 cut(s)	978
XspI	CTAG	2 cut(s)	327, 378
ZraI	GACGTC	1 cut(s)	337

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.