Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0000929

Physical Location & Seq

Genomic Coordinates Forward (+)

28689769 .. 28690911

Gene Structure 1143 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG153600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1143 bp

ATGGCGCCTAGTAGATCGGTGAGTAATCTAGAGGCAGATGGCCGGGAACGATCAGACTTCCCGATCATCTGCGAATCATGCCTCGGTGACAATCCCTACGTACGCATGACGCGTGCCGATTTCGACAAAGAGTGCTACACCTGCAGTCGTCCCTTCACCGTTTTCCGGTGGAAACCCGGCCACGACGCCCGCTACAAGAAGACGGAGATTTGCCAGACCTGCAGTAAGTTGCAAAATGTGTGTCAGGTCTGCGTCTTAGATCTCCGAACCGGCTTGCCGGTTCAGGTCCTGAACACTGCTCTTGGCGTCAACCCAAACGACGCCGTCCTGCCTAAGAGCGACGTCAACCGGGAGTATTTCGCTGAGGAACATGACCGTAGGGTTAGGGCTTCTGGTATTATCGATCCGTACGAACAAGAGTACGGAAAATCAAGGACAAGTGACACTATCCTCAAGCTTCAGAGGACGACACCGTATTACCAGAGGAACCGAGCGCATGTGTGTAGTTTTTACGCTAAGGGCCGGTGCACTAGAGGAGCTGAGTGTCCTTACCGGCATGAGATGCCAATAACTGGAGAGTTGTCAAACCAAAATATCAAGGACCGGTTCCATGGGGTCAACGATCCGGTGGCACTGAAGCTGCTTCGAAAGGCCGGAGAGATGGGGTCTTTGGAGCCTCCTGAGGACGAGAGTATTAGGACTTTATATGTGGGGGGTGTGGTTGATGGAAGAGTTTCGGAGCAGGACTTGAGGGATTGCTTTTGGGTTCATGGCGAGATCGAATCGATTAGGGTGGTGGGGCAAAGAGGATGTGCTTTTGTGACTTATGTAACGAGAGAAGGTGCGGAGAAGGCTGCGGAGGAACTTTGTAATAAGCTGGTGGTGAAGGGTTTGAGATTGAAGTTGGCATGGGGTAGACCTCAGGCGCCACGAGTGCAGGATGAGGGAGCTAGTAGGCAGCCGGCTGCGTCAGGGGCACATTGTGGGTGGTTGCCTCAAGTAGGCGTTCCCCAACAAGACCAATCAGCAGTACAGCAATACTACTACATGCCACGTCCACCTTCGCAAGGGGGAACAACATTTTATCCATCAATGGATCCTCAAAGAATGGGCACCCTTGTTGGCGGACCTAAAGCTGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000387 GO:0000398 GO:0000974 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008380 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0017069 GO:0017070 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0034622 GO:0034641 GO:0036002 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0050896 GO:0051704 GO:0051707 GO:0065003 GO:0071006 GO:0071007 GO:0071012 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1 Torus

Protein Analysis

380

Amino Acids

42.65

Weight (kDa)

8.29

Isoelectric Point (pI)

50.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
STL11_N	PF21369	21 - 104	2.6e-24	STL11, N-terminal
Torus	PF16131	160 - 203	5.5e-08	Torus domain
zf-CCCH_RBM22	PF25584	162 - 188	8.2e-10	RBM22 CCCH zinc finger domain
RRM_1	PF00076	235 - 292	9.2e-09	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000929)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07360 AT2G29580 AT5G04210 AT5G07060 AT5G07060
fragaria_vesca	FvH4_4g11590 FvH4_4g11590 FvH4_4g11590 FvH4_4g11590 FvH4_4g11590 FvH4_4g36530 FvH4_4g36530 FvH4_7g07370
malus_domestica	MD01G1110000.v1.1 MD07G1175800.v1.1 MD16G1006600.v1.1
prunus_persica	Prupe.2G214800_v2.0.a1 Prupe.8G143100_v2.0.a1 Prupe.8G143100_v2.0.a1 Prupe.8G143100_v2.0.a1
pyrus_communis	pycom01g13690 pycom07g17000 pycom16g00630
rosa_chinensis	RchiOBHm_Chr1g0337351 RchiOBHm_Chr4g0408701 RchiOBHm_Chr4g0446281
rosa_laevigata	RLG00000005673 RLG00000008640 RLG00000029280 RLG00000029283
rosa_multiflora	Rmu_co8341103.1_g000001 Rmu_co8350441.1_g000001 Rmu_co8408813.1_g000001 Rmu_co8519167.1_g000003 Rmu_co8522047.1_g000002 Rmu_sc0002266.1_g000007 Rmu_sc0003060.1_g000002 Rmu_sc0005878.1_g000023 Rmu_sc0021927.1_g000001
rosa_roxburghii	Rroxscaffold_4G00314450 Rroxscaffold_4G00314490 Rroxscaffold_5G00353060 Rroxscaffold_5G00386720
rosa_rugosa	Rorug01G0134600.1 Rorug01G0134800.1 Rorug04G0086900 Rorug04G0369600 Rorug04G0369600
rosa_samantha	Rh1AG153600 Rh1BG122900 Rh1BG123100 Rh1CG144600 Rh1DG161300 Rh1DG161500 Rh4AG431500 Rh4BG148400 Rh4BG440900 Rh4CG159100 Rh4CG458200 Rh4DG144000 Rh4DG439400
rosa_wichuraiana	Rw1G012580 Rw4G012370 Rw4G036850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	149
AatII	GACGTC	1 cut(s)	345
Acc36I	ACCTGC	2 cut(s)	149, 227
AccB1I	GGYRCC	3 cut(s)	4, 925, 1112
AccB7I	CCANNNNNTGG	1 cut(s)	572
AccI	GTMKAC	1 cut(s)	916
AccII	CGCG	1 cut(s)	112
AciI	CCGC	4 cut(s)	190, 845, 857, 1125
AclWI	GGATC	4 cut(s)	398, 617, 1091, 1104
AcoI	YGGCCR	2 cut(s)	40, 178
AcuI	CTGAAG	2 cut(s)	443, 656
AcyI	GRCGYC	6 cut(s)	5, 186, 306, 321, 342, 926
AdeI	CACNNNGTG	1 cut(s)	983
AfaI	GTAC	4 cut(s)	102, 410, 422, 1032
AfiI	CCNNNNNNNGG	4 cut(s)	165, 572, 1001, 1067
AflIII	ACRYGT	1 cut(s)	110
AgeI	ACCGGT	1 cut(s)	603
AgsI	TTSAA	1 cut(s)	901
AjiI	CACGTC	1 cut(s)	1055
AluBI	AGCT	6 cut(s)	457, 539, 640, 877, 950, 1136
AluI	AGCT	6 cut(s)	457, 539, 640, 877, 950, 1136
Alw21I	GWGCWC	1 cut(s)	530
Alw44I	GTGCAC	1 cut(s)	526
AlwI	GGATC	4 cut(s)	398, 617, 1091, 1104
AlwNI	CAGNNNCTG	1 cut(s)	289
AoxI	GGCC	4 cut(s)	40, 178, 520, 651
ApaLI	GTGCAC	1 cut(s)	526
ApeKI	GCWGC	4 cut(s)	640, 854, 958, 965
ArsI	GACNNNNNNTTYG	2 cut(s)	226, 258
AsiGI	ACCGGT	1 cut(s)	603
Asp700I	GAANNNNTTC	1 cut(s)	733
AspLEI	GCGC	3 cut(s)	7, 496, 928
AspS9I	GGNCC	4 cut(s)	286, 520, 601, 1127
AsuC2I	CCSGG	3 cut(s)	44, 177, 350
AsuHPI	GGTGA	4 cut(s)	31, 98, 148, 895
AsuII	TTCGAA	1 cut(s)	646
AvaII	GGWCC	3 cut(s)	286, 601, 1127
AxyI	CCTNAGG	2 cut(s)	681, 921
BaeGI	GKGCMC	3 cut(s)	530, 979, 1115
BamHI	GGATCC	1 cut(s)	1096
BanI	GGYRCC	3 cut(s)	4, 925, 1112
BauI	CACGAG	1 cut(s)	930
BbsI	GAAGAC	1 cut(s)	206
Bbv12I	GWGCWC	1 cut(s)	530
BbvCI	CCTCAGC	1 cut(s)	363
BbvI	GCAGC	4 cut(s)	627, 841, 952, 970
BccI	CCATC	4 cut(s)	32, 655, 719, 1096
BceAI	ACGGC	1 cut(s)	308
BcnI	CCSGG	3 cut(s)	44, 177, 350
BfaI	CTAG	4 cut(s)	9, 29, 531, 951
BfmI	CTRYAG	2 cut(s)	142, 220
BfoI	RGCGCY	2 cut(s)	8, 929
BfuAI	ACCTGC	2 cut(s)	149, 227
BglII	AGATCT	1 cut(s)	259
BisI	GCNGC	4 cut(s)	641, 855, 959, 966
BlsI	GCNGC	4 cut(s)	642, 856, 960, 967
Bme1390I	CCNGG	3 cut(s)	44, 177, 350
Bme18I	GGWCC	3 cut(s)	286, 601, 1127
BmgBI	CACGTC	1 cut(s)	1055
BmgT120I	GGNCC	4 cut(s)	286, 520, 601, 1127
BmiI	GGNNCC	7 cut(s)	6, 488, 608, 675, 927, 1098, 1114
BmrFI	CCNGG	3 cut(s)	44, 177, 350
BmsI	GCATC	1 cut(s)	552
BpiI	GAAGAC	1 cut(s)	206
BpmI	CTGGAG	1 cut(s)	594
Bpu10I	CCTNAGC	2 cut(s)	363, 516
Bpu14I	TTCGAA	1 cut(s)	646
BpuEI	CTTGAG	3 cut(s)	437, 769, 981
BpuMI	CCSGG	3 cut(s)	44, 177, 350
Bsa29I	ATCGAT	2 cut(s)	402, 785
BsaAI	YACGTR	1 cut(s)	100
BsaHI	GRCGYC	6 cut(s)	5, 186, 306, 321, 342, 926
BsaJI	CCNNGG	2 cut(s)	82, 610
BsaWI	WCCGGW	3 cut(s)	165, 603, 625
Bsc4I	CCNNNNNNNGG	4 cut(s)	165, 572, 1001, 1067
Bse118I	RCCGGY	6 cut(s)	269, 277, 522, 552, 603, 961
Bse1I	ACTGG	1 cut(s)	577
Bse21I	CCTNAGG	2 cut(s)	681, 921
BseCI	ATCGAT	2 cut(s)	402, 785
BseDI	CCNNGG	2 cut(s)	82, 610
BseGI	GGATG	2 cut(s)	815, 946
BseLI	CCNNNNNNNGG	4 cut(s)	165, 572, 1001, 1067
BseMII	CTCAG	5 cut(s)	354, 531, 672, 935, 1128
BseNI	ACTGG	1 cut(s)	577
BseRI	GAGGAG	1 cut(s)	549
BseSI	GKGCMC	3 cut(s)	530, 979, 1115
BseXI	GCAGC	4 cut(s)	627, 841, 952, 970
BsgI	GTGCAG	1 cut(s)	956
Bsh1236I	CGCG	1 cut(s)	112
BshFI	GGCC	4 cut(s)	42, 180, 522, 653
BshNI	GGYRCC	3 cut(s)	4, 925, 1112
BshTI	ACCGGT	1 cut(s)	603
BshVI	ATCGAT	2 cut(s)	402, 785
BsiHKAI	GWGCWC	1 cut(s)	530
BsiWI	CGTACG	2 cut(s)	100, 408
BslFI	GGGAC	1 cut(s)	135
BslI	CCNNNNNNNGG	4 cut(s)	165, 572, 1001, 1067
BsmFI	GGGAC	1 cut(s)	135
BsnI	GGCC	4 cut(s)	42, 180, 522, 653
Bsp119I	TTCGAA	1 cut(s)	646
Bsp1286I	GDGCHC	3 cut(s)	530, 979, 1115
Bsp143I	GATC	8 cut(s)	14, 50, 63, 259, 403, 622, 777, 1096
Bsp19I	CCATGG	1 cut(s)	610
BspACI	CCGC	4 cut(s)	190, 845, 857, 1125
BspANI	GGCC	4 cut(s)	42, 180, 522, 653
BspCNI	CTCAG	5 cut(s)	355, 532, 673, 934, 1129
BspDI	ATCGAT	2 cut(s)	402, 785
BspFNI	CGCG	1 cut(s)	112
BspLI	GGNNCC	7 cut(s)	6, 488, 608, 675, 927, 1098, 1114
BspMAI	CTGCAG	2 cut(s)	146, 224
BspMI	ACCTGC	2 cut(s)	149, 227
BspPI	GGATC	4 cut(s)	398, 617, 1091, 1104
BspT104I	TTCGAA	1 cut(s)	646
BspT107I	GGYRCC	3 cut(s)	4, 925, 1112
BsrFI	RCCGGY	6 cut(s)	269, 277, 522, 552, 603, 961
BsrI	ACTGG	1 cut(s)	577
BssAI	RCCGGY	6 cut(s)	269, 277, 522, 552, 603, 961
BssECI	CCNNGG	2 cut(s)	82, 610
BssMI	GATC	8 cut(s)	14, 50, 63, 259, 403, 622, 777, 1096
BssNI	GRCGYC	6 cut(s)	5, 186, 306, 321, 342, 926
BssSI	CACGAG	1 cut(s)	930
BssT1I	CCWWGG	1 cut(s)	610
Bst2BI	CACGAG	1 cut(s)	930
Bst4CI	ACNGT	3 cut(s)	160, 377, 474
Bst6I	CTCTTC	1 cut(s)	724
BstACI	GRCGYC	6 cut(s)	5, 186, 306, 321, 342, 926
BstAPI	GCANNNNNTGC	1 cut(s)	562
BstBAI	YACGTR	1 cut(s)	100
BstBI	TTCGAA	1 cut(s)	646
BstC8I	GCNNGC	4 cut(s)	114, 190, 275, 963
BstDEI	CTNAG	8 cut(s)	256, 333, 363, 516, 540, 681, 921, 1137
BstDSI	CCRYGG	1 cut(s)	610
BstENI	CCTNNNNNAGG	2 cut(s)	999, 1065
BstF5I	GGATG	2 cut(s)	815, 946
BstFNI	CGCG	1 cut(s)	112
BstH2I	RGCGCY	2 cut(s)	8, 929
BstHHI	GCGC	3 cut(s)	7, 496, 928
BstKTI	GATC	8 cut(s)	17, 53, 66, 262, 406, 625, 780, 1099
BstMBI	GATC	8 cut(s)	14, 50, 63, 259, 403, 622, 777, 1096
BstMWI	GCNNNNNNNGC	7 cut(s)	78, 141, 219, 562, 851, 934, 974
BstNSI	RCATGY	2 cut(s)	500, 1051
BstSCI	CCNGG	3 cut(s)	42, 175, 348
BstSFI	CTRYAG	2 cut(s)	142, 220
BstSLI	GKGCMC	3 cut(s)	530, 979, 1115
BstSNI	TACGTA	1 cut(s)	100
BstUI	CGCG	1 cut(s)	112
BstV1I	GCAGC	4 cut(s)	627, 841, 952, 970
BstV2I	GAAGAC	1 cut(s)	206
BstX2I	RGATCY	2 cut(s)	259, 1096
BstYI	RGATCY	2 cut(s)	259, 1096
Bsu15I	ATCGAT	2 cut(s)	402, 785
Bsu36I	CCTNAGG	2 cut(s)	681, 921
BsuRI	GGCC	4 cut(s)	42, 180, 522, 653
BsuTUI	ATCGAT	2 cut(s)	402, 785
BtgI	CCRYGG	1 cut(s)	610
BtrI	CACGTC	1 cut(s)	1055
BtsCI	GGATG	2 cut(s)	815, 946
BtsI	GCAGTG	1 cut(s)	294
BtsIMutI	CAGTG	2 cut(s)	294, 632
BveI	ACCTGC	2 cut(s)	149, 227
Cac8I	GCNNGC	4 cut(s)	114, 190, 275, 963
CaiI	CAGNNNCTG	1 cut(s)	289
CfoI	GCGC	3 cut(s)	7, 496, 928
Cfr10I	RCCGGY	6 cut(s)	269, 277, 522, 552, 603, 961
Cfr13I	GGNCC	4 cut(s)	286, 520, 601, 1127
ClaI	ATCGAT	2 cut(s)	402, 785
CseI	GACGC	6 cut(s)	118, 194, 241, 295, 329, 957
Csp6I	GTAC	4 cut(s)	101, 409, 421, 1031
CspAI	ACCGGT	1 cut(s)	603
CviAII	CATG	9 cut(s)	78, 106, 371, 497, 557, 611, 770, 909, 1048
CviQI	GTAC	4 cut(s)	101, 409, 421, 1031
DdeI	CTNAG	8 cut(s)	256, 333, 363, 516, 540, 681, 921, 1137
DinI	GGCGCC	2 cut(s)	6, 927
DpnI	GATC	8 cut(s)	16, 52, 65, 261, 405, 624, 779, 1098
DpnII	GATC	8 cut(s)	14, 50, 63, 259, 403, 622, 777, 1096
DraIII	CACNNNGTG	1 cut(s)	983
EaeI	YGGCCR	2 cut(s)	40, 178
Eam1104I	CTCTTC	1 cut(s)	724
EarI	CTCTTC	1 cut(s)	724
EciI	GGCGGA	1 cut(s)	1140
Eco105I	TACGTA	1 cut(s)	100
Eco130I	CCWWGG	1 cut(s)	610
Eco47I	GGWCC	3 cut(s)	286, 601, 1127
Eco57I	CTGAAG	2 cut(s)	443, 656
Eco81I	CCTNAGG	2 cut(s)	681, 921
EcoNI	CCTNNNNNAGG	2 cut(s)	999, 1065
EcoO109I	RGGNCCY	1 cut(s)	286
EcoT14I	CCWWGG	1 cut(s)	610
EgeI	GGCGCC	2 cut(s)	6, 927
EheI	GGCGCC	2 cut(s)	6, 927
ErhI	CCWWGG	1 cut(s)	610
FaeI	CATG	9 cut(s)	81, 109, 374, 500, 560, 614, 773, 912, 1051
FaqI	GGGAC	1 cut(s)	135
FatI	CATG	9 cut(s)	77, 105, 370, 496, 556, 610, 769, 908, 1047
FauI	CCCGC	1 cut(s)	197
FblI	GTMKAC	1 cut(s)	916
Fnu4HI	GCNGC	4 cut(s)	641, 855, 959, 966
FokI	GGATG	2 cut(s)	822, 953
Fsp4HI	GCNGC	4 cut(s)	641, 855, 959, 966
FspBI	CTAG	4 cut(s)	9, 29, 531, 951
GlaI	GCGC	3 cut(s)	6, 495, 927
GluI	GCNGC	4 cut(s)	641, 855, 959, 966
GsuI	CTGGAG	1 cut(s)	594
HaeII	RGCGCY	2 cut(s)	8, 929
HaeIII	GGCC	4 cut(s)	42, 180, 522, 653
HgaI	GACGC	6 cut(s)	118, 194, 241, 295, 329, 957
HhaI	GCGC	3 cut(s)	7, 496, 928
Hin1I	GRCGYC	6 cut(s)	5, 186, 306, 321, 342, 926
Hin1II	CATG	9 cut(s)	81, 109, 374, 500, 560, 614, 773, 912, 1051
Hin6I	GCGC	3 cut(s)	5, 494, 926
HinP1I	GCGC	3 cut(s)	5, 494, 926
HincII	GTYRAC	3 cut(s)	310, 346, 619
HindII	GTYRAC	3 cut(s)	310, 346, 619
HindIII	AAGCTT	1 cut(s)	455
HinfI	GANTC	2 cut(s)	74, 782
HphI	GGTGA	4 cut(s)	31, 98, 148, 895
Hpy166II	GTNNAC	6 cut(s)	310, 346, 528, 619, 917, 1058
Hpy188I	TCNGA	4 cut(s)	55, 266, 462, 739
Hpy188III	TCNNGA	4 cut(s)	29, 61, 289, 680
Hpy8I	GTNNAC	6 cut(s)	310, 346, 528, 619, 917, 1058
Hpy99I	CGWCG	3 cut(s)	188, 323, 344
HpyAV	CCTTC	5 cut(s)	163, 833, 844, 880, 1071
HpyCH4III	ACNGT	3 cut(s)	160, 377, 474
HpyCH4IV	ACGT	3 cut(s)	99, 342, 1054
HpyCH4V	TGCA	5 cut(s)	144, 222, 232, 528, 937
HpyF10VI	GCNNNNNNNGC	7 cut(s)	78, 141, 219, 562, 851, 934, 974
HpyF3I	CTNAG	8 cut(s)	256, 333, 363, 516, 540, 681, 921, 1137
HpySE526I	ACGT	3 cut(s)	99, 342, 1054
Hsp92I	GRCGYC	6 cut(s)	5, 186, 306, 321, 342, 926
Hsp92II	CATG	9 cut(s)	81, 109, 374, 500, 560, 614, 773, 912, 1051
HspAI	GCGC	3 cut(s)	5, 494, 926
KasI	GGCGCC	2 cut(s)	4, 925
KroI	GCCGGC	1 cut(s)	961
KroNI	GCCGGC	1 cut(s)	963
Kzo9I	GATC	8 cut(s)	14, 50, 63, 259, 403, 622, 777, 1096
LmnI	GCTCC	4 cut(s)	536, 673, 739, 947
Lsp1109I	GCAGC	4 cut(s)	627, 841, 952, 970
LweI	GCATC	1 cut(s)	552
MaeI	CTAG	4 cut(s)	9, 29, 531, 951
MaeII	ACGT	3 cut(s)	99, 342, 1054
MaeIII	GTNAC	4 cut(s)	86, 440, 820, 829
MalI	GATC	8 cut(s)	16, 52, 65, 261, 405, 624, 779, 1098
MboI	GATC	8 cut(s)	14, 50, 63, 259, 403, 622, 777, 1096
MboII	GAAGA	2 cut(s)	211, 741
MflI	RGATCY	2 cut(s)	259, 1096
MhlI	GDGCHC	3 cut(s)	530, 979, 1115
MluI	ACGCGT	1 cut(s)	110
Mly113I	GGCGCC	2 cut(s)	5, 926
MroNI	GCCGGC	1 cut(s)	961
MroXI	GAANNNNTTC	1 cut(s)	733
MspR9I	CCNGG	3 cut(s)	44, 177, 350
MvnI	CGCG	1 cut(s)	112
MwoI	GCNNNNNNNGC	7 cut(s)	78, 141, 219, 562, 851, 934, 974
NaeI	GCCGGC	1 cut(s)	963
NarI	GGCGCC	2 cut(s)	5, 926
NciI	CCSGG	3 cut(s)	44, 177, 350
NcoI	CCATGG	1 cut(s)	610
NdeII	GATC	8 cut(s)	14, 50, 63, 259, 403, 622, 777, 1096
NgoMIV	GCCGGC	1 cut(s)	961
NlaIII	CATG	9 cut(s)	81, 109, 374, 500, 560, 614, 773, 912, 1051
NlaIV	GGNNCC	7 cut(s)	6, 488, 608, 675, 927, 1098, 1114
NmuCI	GTSAC	3 cut(s)	86, 440, 820
NspI	RCATGY	2 cut(s)	500, 1051
NspV	TTCGAA	1 cut(s)	646
PaqCI	CACCTGC	1 cut(s)	149
PcsI	WCGNNNNNNNCGW	2 cut(s)	109, 408
PdiI	GCCGGC	1 cut(s)	963
PdmI	GAANNNNTTC	1 cut(s)	733
PfeI	GAWTC	2 cut(s)	74, 782
Pfl23II	CGTACG	2 cut(s)	100, 408
PflFI	GACNNNGTC	1 cut(s)	323
PflMI	CCANNNNNTGG	1 cut(s)	572
PinAI	ACCGGT	1 cut(s)	603
PkrI	GCNGC	4 cut(s)	642, 856, 960, 967
PluTI	GGCGCC	2 cut(s)	8, 929
Ppu21I	YACGTR	1 cut(s)	100
PpuMI	RGGWCCY	1 cut(s)	286
Psp5II	RGGWCCY	1 cut(s)	286
PspLI	CGTACG	2 cut(s)	100, 408
PspN4I	GGNNCC	7 cut(s)	6, 488, 608, 675, 927, 1098, 1114
PspPI	GGNCC	4 cut(s)	286, 520, 601, 1127
PspPPI	RGGWCCY	1 cut(s)	286
PstI	CTGCAG	2 cut(s)	146, 224
PstNI	CAGNNNCTG	1 cut(s)	289
PsuI	RGATCY	2 cut(s)	259, 1096
PsyI	GACNNNGTC	1 cut(s)	323
RsaI	GTAC	4 cut(s)	102, 410, 422, 1032
RsaNI	GTAC	4 cut(s)	101, 409, 421, 1031
SatI	GCNGC	4 cut(s)	641, 855, 959, 966
Sau3AI	GATC	8 cut(s)	14, 50, 63, 259, 403, 622, 777, 1096
Sau96I	GGNCC	4 cut(s)	286, 520, 601, 1127
ScrFI	CCNGG	3 cut(s)	44, 177, 350
SduI	GDGCHC	3 cut(s)	530, 979, 1115
SfaNI	GCATC	1 cut(s)	552
SfcI	CTRYAG	2 cut(s)	142, 220
SfoI	GGCGCC	2 cut(s)	6, 927
SfuI	TTCGAA	1 cut(s)	646
SinI	GGWCC	3 cut(s)	286, 601, 1127
SmlI	CTYRAG	3 cut(s)	452, 748, 996
SmoI	CTYRAG	3 cut(s)	452, 748, 996
SnaBI	TACGTA	1 cut(s)	100
SsiI	CCGC	4 cut(s)	190, 845, 857, 1125
SspDI	GGCGCC	2 cut(s)	4, 925
SspMI	CTAG	4 cut(s)	9, 29, 531, 951
StyD4I	CCNGG	3 cut(s)	42, 175, 348
StyI	CCWWGG	1 cut(s)	610
TaaI	ACNGT	3 cut(s)	160, 377, 474
TaiI	ACGT	3 cut(s)	102, 345, 1057
TaqI	TCGA	5 cut(s)	123, 402, 646, 780, 785
TatI	WGTACW	1 cut(s)	1030
TfiI	GAWTC	2 cut(s)	74, 782
TscAI	CASTG	2 cut(s)	301, 639
TseFI	GTSAC	3 cut(s)	86, 440, 820
TseI	GCWGC	4 cut(s)	640, 854, 958, 965
Tsp45I	GTSAC	3 cut(s)	86, 440, 820
TspDTI	ATGAA	1 cut(s)	758
TspGWI	ACGGA	3 cut(s)	218, 396, 438
TspRI	CASTG	2 cut(s)	301, 639
Tth111I	GACNNNGTC	1 cut(s)	323
Van91I	CCANNNNNTGG	1 cut(s)	572
VneI	GTGCAC	1 cut(s)	526
VpaK11BI	GGWCC	3 cut(s)	286, 601, 1127
XagI	CCTNNNNNAGG	2 cut(s)	999, 1065
XbaI	TCTAGA	1 cut(s)	28
XceI	RCATGY	2 cut(s)	500, 1051
XmiI	GTMKAC	1 cut(s)	916
XmnI	GAANNNNTTC	1 cut(s)	733
XspI	CTAG	4 cut(s)	9, 29, 531, 951
ZraI	GACGTC	1 cut(s)	343

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.