Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0000929

Physical Location & Seq

Genomic Coordinates Reverse (-)

54065299 .. 54069445

Gene Structure 4147 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0369600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ATGGCTTCCGAGAGCGCTACGAGATCGAGCTCAGCGGCCGATTCGTACATAGGGAGCTTGATTAGTTTGACTTCCAAGAGTGAGATCAGATACGAAGGCGTGCTCTACAACATCAACACCGAAGAGTCCAGTATTGGACTCCGCAACGTACGGTCTTTTGGAACCGAAGGAAGGAAAAAGGATGGGCCACAAATCCCGCCAGGGGATAAAGTTTATGAGTATATACTCTTCCGTGGGAGTGATATCAAGGATTTACAGGTTAAATCTTCTCCACCAGTTCAGCCTACACCACCTATAAACAATGATCCAGCTATTATTCAGTCTCACTATTCCCGCCCAGCTCCGACAACATTGAGCTTGCCTTCTCCTGCTAGTGGGCCTTTGACAGATATTAATCCCCATACTGCACAGATGGGACTACCTGGTTCAAATTTCCAAGGCAATTTACCTTTATATCAACCTGGAGGAAATTTAGGGTCATGGGGGGTTCCACCTCCTCCAAATGCAAATGGCGGAGGGCTTGCTATGCCAATGTACTGGCAAGGATATTACGGCCCTCCAAATGGCCTTCCTCATTTACACCAGCAATCTTTGCTTCGTCCACCACCCGGGCTATCAATGCCTTCTCCAATGCAACAGCCATTGCAATATCCCAATTTTAGTGCCTCCTTGCCCACTGGACCTTCTAACTTTCCTGAAGGTCCATCACCTCTACTTTCAGCTGCTAGTGGTAGTTCTCCTAGTTTGACCTCTGCTTCTTTAGCACCGCCAATTGGCCCGATTTTGCCAACAACTCTGCCTCCGGTACCTTCCACCACACTAGCTTCTGAAATATTGTCAAGTTCAATGCCTAACAAGGCACCAAGTGGTTCCCCTTCTGTAGCCACACTTAGTGCAAGCTTGCCACCACTTTCTTCTCTGACCAGTTCAAGCACAGATATCAGTACTGTTGCACCATCTATCTCTAACAAGACTTCTATAGTTTCTGGTCCAACCTTGCCCTATCAAAGCGTATCTCAATCTCCTTCCTCTGTTGCTGGGGCATCCAATTCCGTACGCACGGAAACACTGGTTCCTTCTTTGGTAACCCCAGATCAGCTCTTGCAGTCTGGATCTGCTACAGGCCCCTCAGCTCAATCGTTGCAAGCAGCTCATAAGGATGTGGAGGTTGTTCAAGTTTCGTCATCAACCTCACCAGAGCCGCCAGTCCCAGTATCAGCAGAACCTCAGCCACCAATATTGCCATTACCACCACCTGCACGGGCAGGTCAAAAGACAAATGGAGCTCCATTCCAAGCTCGCCAGGGATATACTTATAGGGGGCGTGAGCGAGGCAGGGGAACTGGGTTTGGTGTGCAGAGTTCACGTCCTGTAACAAAATTCACTGAAGAATTTGATTTCACGGCAATGAATGAGAAGTTCAATAAGGATGAGGTTTGGGGCCATCTTGGTAAGAGTAGCAAACCTTCTAAGGACAAAGAGGATGGAAATGACAGTGAAGAAGAATATATCGAAGATGAAGATGATGTGGAGTTGCCAAAGTTTGATGTCAAGCCTGTCTACAATAAGGATGATTTCTTTGACACCATCTCCTCCAATTCTTTCAATAATGAACAGAATGGAAGGACTCGGTACTCTGAGCAAATAAAGATAGATACAGAGACTTTTGGAACGTTTTCAAGGTATCGGGGTGGTCGAGGTGGCCGTGGTCCTGGACGTGGTGGCCGTGGCCGTGGGGGTTACTATGGAAGGGACTATGGAAGGGATTATGGAAGGGGATATGGCTATGTTGGAAGGGGCCGTGGCCGAGGGATGTCTAGTCAAGGCCCACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000387 GO:0000398 GO:0000974 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008380 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0017069 GO:0017070 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0034622 GO:0034641 GO:0036002 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0050896 GO:0051704 GO:0051707 GO:0065003 GO:0071006 GO:0071007 GO:0071012 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1 Torus

Protein Analysis

611

Amino Acids

64.69

Weight (kDa)

6.64

Isoelectric Point (pI)

64.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SM-ATX	PF14438	8 - 88	1.6e-12	Ataxin 2 SM domain
LSM14	PF12701	16 - 89	2.3e-32	Scd6-like Sm domain
FDF	PF09532	460 - 559	7.1e-17	FDF domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000929)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07360 AT2G29580 AT5G04210 AT5G07060 AT5G07060
fragaria_vesca	FvH4_4g11590 FvH4_4g11590 FvH4_4g11590 FvH4_4g11590 FvH4_4g11590 FvH4_4g36530 FvH4_4g36530 FvH4_7g07370
malus_domestica	MD01G1110000.v1.1 MD07G1175800.v1.1 MD16G1006600.v1.1
prunus_persica	Prupe.2G214800_v2.0.a1 Prupe.8G143100_v2.0.a1 Prupe.8G143100_v2.0.a1 Prupe.8G143100_v2.0.a1
pyrus_communis	pycom01g13690 pycom07g17000 pycom16g00630
rosa_chinensis	RchiOBHm_Chr1g0337351 RchiOBHm_Chr4g0408701 RchiOBHm_Chr4g0446281
rosa_laevigata	RLG00000005673 RLG00000008640 RLG00000029280 RLG00000029283
rosa_multiflora	Rmu_co8341103.1_g000001 Rmu_co8350441.1_g000001 Rmu_co8408813.1_g000001 Rmu_co8519167.1_g000003 Rmu_co8522047.1_g000002 Rmu_sc0002266.1_g000007 Rmu_sc0003060.1_g000002 Rmu_sc0005878.1_g000023 Rmu_sc0021927.1_g000001
rosa_roxburghii	Rroxscaffold_4G00314450 Rroxscaffold_4G00314490 Rroxscaffold_5G00353060 Rroxscaffold_5G00386720
rosa_rugosa	Rorug01G0134600.1 Rorug01G0134800.1 Rorug04G0086900 Rorug04G0369600 Rorug04G0369600
rosa_samantha	Rh1AG153600 Rh1BG122900 Rh1BG123100 Rh1CG144600 Rh1DG161300 Rh1DG161500 Rh4AG431500 Rh4BG148400 Rh4BG440900 Rh4CG159100 Rh4CG458200 Rh4DG144000 Rh4DG439400
rosa_wichuraiana	Rw1G012580 Rw4G012370 Rw4G036850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1264
Acc36I	ACCTGC	2 cut(s)	1256, 1264
Acc65I	GGTACC	1 cut(s)	805
AccB1I	GGYRCC	2 cut(s)	805, 859
AccI	GTMKAC	1 cut(s)	1560
AciI	CCGC	7 cut(s)	35, 142, 197, 334, 513, 767, 1202
AclI	AACGTT	1 cut(s)	1673
AclWI	GGATC	2 cut(s)	299, 1120
AcoI	YGGCCR	5 cut(s)	36, 1702, 1723, 1729, 1804
AcsI	RAATTY	4 cut(s)	430, 469, 1379, 1391
AcuI	CTGAAG	2 cut(s)	717, 1407
AdeI	CACNNNGTG	2 cut(s)	866, 893
AfaI	GTAC	7 cut(s)	47, 150, 536, 807, 946, 1056, 1634
AfeI	AGCGCT	1 cut(s)	16
AfiI	CCNNNNNNNGG	7 cut(s)	171, 202, 374, 563, 608, 773, 1718
AgsI	TTSAA	7 cut(s)	429, 846, 930, 1175, 1423, 1606, 1680
AjiI	CACGTC	2 cut(s)	1367, 1718
AjnI	CCWGG	5 cut(s)	199, 421, 460, 1302, 1711
Alw21I	GWGCWC	3 cut(s)	32, 105, 1288
Alw26I	GTCTC	2 cut(s)	327, 1655
AlwI	GGATC	2 cut(s)	299, 1120
Ama87I	CYCGRG	1 cut(s)	608
Aor51HI	AGCGCT	1 cut(s)	16
ApeKI	GCWGC	2 cut(s)	722, 1148
ApoI	RAATTY	4 cut(s)	430, 469, 1379, 1391
AseI	ATTAAT	1 cut(s)	393
Asp700I	GAANNNNTTC	1 cut(s)	1675
Asp718I	GGTACC	1 cut(s)	805
AspLEI	GCGC	1 cut(s)	17
AsuC2I	CCSGG	2 cut(s)	609, 610
AsuHPI	GGTGA	2 cut(s)	699, 1185
AvaI	CYCGRG	1 cut(s)	608
AvaII	GGWCC	4 cut(s)	680, 701, 989, 1709
BanI	GGYRCC	2 cut(s)	805, 859
BanII	GRGCYC	2 cut(s)	32, 1288
BarI	GAAGNNNNNNTAC	4 cut(s)	212, 244, 1450, 1482
Bbv12I	GWGCWC	3 cut(s)	32, 105, 1288
BbvCI	CCTCAGC	2 cut(s)	1129, 1227
BbvI	GCAGC	2 cut(s)	709, 1160
BccI	CCATC	7 cut(s)	176, 406, 712, 964, 1452, 1478, 1595
BceAI	ACGGC	6 cut(s)	568, 1419, 1689, 1710, 1716, 1785
BciT130I	CCWGG	5 cut(s)	201, 423, 462, 1304, 1713
BcnI	CCSGG	2 cut(s)	609, 610
BcoDI	GTCTC	2 cut(s)	327, 1655
BfaI	CTAG	5 cut(s)	372, 726, 741, 821, 1818
BfmI	CTRYAG	3 cut(s)	879, 978, 1119
BfoI	RGCGCY	1 cut(s)	18
BfuAI	ACCTGC	2 cut(s)	1256, 1264
BisI	GCNGC	4 cut(s)	36, 723, 1149, 1202
BlpI	GCTNAGC	1 cut(s)	31
BlsI	GCNGC	4 cut(s)	37, 724, 1150, 1203
BmcAI	AGTACT	1 cut(s)	946
Bme1390I	CCNGG	7 cut(s)	201, 423, 462, 609, 610, 1304, 1713
Bme18I	GGWCC	4 cut(s)	680, 701, 989, 1709
BmeT110I	CYCGRG	1 cut(s)	608
BmgBI	CACGTC	2 cut(s)	1367, 1718
BmiI	GGNNCC	9 cut(s)	163, 489, 807, 861, 871, 1074, 1126, 1442, 1799
BmrFI	CCNGG	7 cut(s)	201, 423, 462, 609, 610, 1304, 1713
BmrI	ACTGGG	2 cut(s)	1205, 1353
BmsI	GCATC	1 cut(s)	1052
BmuI	ACTGGG	2 cut(s)	1205, 1353
BpmI	CTGGAG	1 cut(s)	483
Bpu10I	CCTNAGC	2 cut(s)	1129, 1227
Bpu1102I	GCTNAGC	1 cut(s)	31
BpuMI	CCSGG	2 cut(s)	609, 610
BsaBI	GATNNNNATC	1 cut(s)	393
BsaWI	WCCGGW	1 cut(s)	802
BsaXI	ACNNNNNCTCC	4 cut(s)	784, 814, 1574, 1604
Bsc4I	CCNNNNNNNGG	7 cut(s)	171, 202, 374, 563, 608, 773, 1718
Bse1I	ACTGG	9 cut(s)	129, 275, 542, 682, 924, 1074, 1205, 1211, 1348
Bse3DI	GCAATG	2 cut(s)	641, 1413
Bse8I	GATNNNNATC	1 cut(s)	393
BseBI	CCWGG	5 cut(s)	201, 423, 462, 1304, 1713
BseGI	GGATG	7 cut(s)	187, 1043, 1165, 1435, 1489, 1576, 1818
BseJI	GATNNNNATC	1 cut(s)	393
BseLI	CCNNNNNNNGG	7 cut(s)	171, 202, 374, 563, 608, 773, 1718
BseMI	GCAATG	2 cut(s)	641, 1413
BseMII	CTCAG	4 cut(s)	45, 1143, 1241, 1629
BseNI	ACTGG	9 cut(s)	129, 275, 542, 682, 924, 1074, 1205, 1211, 1348
BseRI	GAGGAG	2 cut(s)	486, 1582
BseX3I	CGGCCG	1 cut(s)	36
BseXI	GCAGC	2 cut(s)	709, 1160
BseYI	CCCAGC	2 cut(s)	337, 1037
BsgI	GTGCAG	3 cut(s)	390, 1242, 1376
Bsh1285I	CGRYCG	1 cut(s)	39
BshNI	GGYRCC	2 cut(s)	805, 859
BsiEI	CGRYCG	1 cut(s)	39
BsiHKAI	GWGCWC	3 cut(s)	32, 105, 1288
BsiHKCI	CYCGRG	1 cut(s)	608
BsiSI	CCGG	2 cut(s)	609, 803
BsiWI	CGTACG	2 cut(s)	148, 1054
BslFI	GGGAC	3 cut(s)	429, 1193, 1766
BslI	CCNNNNNNNGG	7 cut(s)	171, 202, 374, 563, 608, 773, 1718
BsmAI	GTCTC	2 cut(s)	327, 1655
BsmFI	GGGAC	3 cut(s)	429, 1193, 1766
BsoBI	CYCGRG	1 cut(s)	608
Bsp1286I	GDGCHC	3 cut(s)	32, 105, 1288
Bsp143I	GATC	5 cut(s)	23, 84, 304, 1093, 1112
Bsp1720I	GCTNAGC	1 cut(s)	31
BspACI	CCGC	7 cut(s)	35, 142, 197, 334, 513, 767, 1202
BspCNI	CTCAG	4 cut(s)	44, 1142, 1240, 1630
BspLI	GGNNCC	9 cut(s)	163, 489, 807, 861, 871, 1074, 1126, 1442, 1799
BspMI	ACCTGC	2 cut(s)	1256, 1264
BspPI	GGATC	2 cut(s)	299, 1120
BspT107I	GGYRCC	2 cut(s)	805, 859
BsrDI	GCAATG	2 cut(s)	641, 1413
BsrI	ACTGG	9 cut(s)	129, 275, 542, 682, 924, 1074, 1205, 1211, 1348
BssMI	GATC	5 cut(s)	23, 84, 304, 1093, 1112
BssT1I	CCWWGG	1 cut(s)	436
Bst2UI	CCWGG	5 cut(s)	201, 423, 462, 1304, 1713
Bst4CI	ACNGT	4 cut(s)	153, 949, 1496, 1833
Bst6I	CTCTTC	2 cut(s)	117, 233
BstAPI	GCANNNNNTGC	1 cut(s)	592
BstC8I	GCNNGC	7 cut(s)	101, 359, 522, 898, 902, 1146, 1300
BstDEI	CTNAG	6 cut(s)	31, 890, 1129, 1227, 1470, 1638
BstDSI	CCRYGG	5 cut(s)	232, 1705, 1726, 1732, 1801
BstEII	GGTNACC	1 cut(s)	1084
BstF5I	GGATG	7 cut(s)	187, 1043, 1165, 1435, 1489, 1576, 1818
BstH2I	RGCGCY	1 cut(s)	18
BstHHI	GCGC	1 cut(s)	17
BstKTI	GATC	5 cut(s)	26, 87, 307, 1096, 1115
BstMAI	GTCTC	2 cut(s)	327, 1655
BstMBI	GATC	5 cut(s)	23, 84, 304, 1093, 1112
BstMCI	CGRYCG	1 cut(s)	39
BstMWI	GCNNNNNNNGC	4 cut(s)	526, 592, 619, 761
BstNI	CCWGG	5 cut(s)	201, 423, 462, 1304, 1713
BstPI	GGTNACC	1 cut(s)	1084
BstSCI	CCNGG	7 cut(s)	199, 421, 460, 607, 608, 1302, 1711
BstSFI	CTRYAG	3 cut(s)	879, 978, 1119
BstV1I	GCAGC	2 cut(s)	709, 1160
BstX2I	RGATCY	1 cut(s)	1112
BstXI	CCANNNNNNTGG	1 cut(s)	537
BstYI	RGATCY	1 cut(s)	1112
BstZI	CGGCCG	1 cut(s)	36
BtgI	CCRYGG	5 cut(s)	232, 1705, 1726, 1732, 1801
BtrI	CACGTC	2 cut(s)	1367, 1718
BtsCI	GGATG	7 cut(s)	187, 1043, 1165, 1435, 1489, 1576, 1818
BtsIMutI	CAGTG	4 cut(s)	675, 1067, 1383, 1501
BveI	ACCTGC	2 cut(s)	1256, 1264
Cac8I	GCNNGC	7 cut(s)	101, 359, 522, 898, 902, 1146, 1300
CfoI	GCGC	1 cut(s)	17
Cfr9I	CCCGGG	1 cut(s)	608
CsiI	ACCWGGT	1 cut(s)	421
Csp6I	GTAC	7 cut(s)	46, 149, 535, 806, 945, 1055, 1633
CspCI	CAANNNNNGTGG	2 cut(s)	1221, 1256
CviAII	CATG	1 cut(s)	480
CviQI	GTAC	7 cut(s)	46, 149, 535, 806, 945, 1055, 1633
DdeI	CTNAG	6 cut(s)	31, 890, 1129, 1227, 1470, 1638
DpnI	GATC	5 cut(s)	25, 86, 306, 1095, 1114
DpnII	GATC	5 cut(s)	23, 84, 304, 1093, 1112
DraIII	CACNNNGTG	2 cut(s)	866, 893
EaeI	YGGCCR	5 cut(s)	36, 1702, 1723, 1729, 1804
EagI	CGGCCG	1 cut(s)	36
Eam1104I	CTCTTC	2 cut(s)	117, 233
EarI	CTCTTC	2 cut(s)	117, 233
EciI	GGCGGA	1 cut(s)	528
Ecl136II	GAGCTC	2 cut(s)	30, 1286
EclXI	CGGCCG	1 cut(s)	36
Eco130I	CCWWGG	1 cut(s)	436
Eco24I	GRGCYC	2 cut(s)	32, 1288
Eco32I	GATATC	2 cut(s)	244, 940
Eco47I	GGWCC	4 cut(s)	680, 701, 989, 1709
Eco47III	AGCGCT	1 cut(s)	16
Eco52I	CGGCCG	1 cut(s)	36
Eco53kI	GAGCTC	2 cut(s)	30, 1286
Eco57I	CTGAAG	2 cut(s)	717, 1407
Eco88I	CYCGRG	1 cut(s)	608
Eco91I	GGTNACC	1 cut(s)	1084
EcoICRI	GAGCTC	2 cut(s)	30, 1286
EcoO109I	RGGNCCY	1 cut(s)	1124
EcoO65I	GGTNACC	1 cut(s)	1084
EcoRII	CCWGG	5 cut(s)	199, 421, 460, 1302, 1711
EcoRV	GATATC	2 cut(s)	244, 940
EcoT14I	CCWWGG	1 cut(s)	436
EcoT38I	GRGCYC	2 cut(s)	32, 1288
ErhI	CCWWGG	1 cut(s)	436
FaeI	CATG	1 cut(s)	483
FaqI	GGGAC	3 cut(s)	429, 1193, 1766
FatI	CATG	1 cut(s)	479
FauI	CCCGC	2 cut(s)	204, 341
FblI	GTMKAC	1 cut(s)	1560
Fnu4HI	GCNGC	4 cut(s)	36, 723, 1149, 1202
FokI	GGATG	7 cut(s)	194, 1030, 1172, 1442, 1496, 1583, 1825
FriOI	GRGCYC	2 cut(s)	32, 1288
Fsp4HI	GCNGC	4 cut(s)	36, 723, 1149, 1202
FspBI	CTAG	5 cut(s)	372, 726, 741, 821, 1818
GlaI	GCGC	1 cut(s)	16
GluI	GCNGC	4 cut(s)	36, 723, 1149, 1202
GsaI	CCCAGC	2 cut(s)	341, 1041
GsuI	CTGGAG	1 cut(s)	483
HaeII	RGCGCY	1 cut(s)	18
HapII	CCGG	2 cut(s)	609, 803
HhaI	GCGC	1 cut(s)	17
Hin1II	CATG	1 cut(s)	483
Hin6I	GCGC	1 cut(s)	15
HinP1I	GCGC	1 cut(s)	15
HindIII	AAGCTT	1 cut(s)	898
HinfI	GANTC	4 cut(s)	41, 125, 138, 1627
HpaII	CCGG	2 cut(s)	609, 803
HphI	GGTGA	2 cut(s)	699, 1185
Hpy166II	GTNNAC	3 cut(s)	602, 1364, 1561
Hpy188I	TCNGA	6 cut(s)	10, 89, 345, 829, 921, 1639
Hpy188III	TCNNGA	2 cut(s)	695, 1110
Hpy8I	GTNNAC	3 cut(s)	602, 1364, 1561
HpyCH4III	ACNGT	4 cut(s)	153, 949, 1496, 1833
HpyCH4IV	ACGT	4 cut(s)	147, 1366, 1673, 1717
HpyF10VI	GCNNNNNNNGC	4 cut(s)	526, 592, 619, 761
HpyF3I	CTNAG	6 cut(s)	31, 890, 1129, 1227, 1470, 1638
HpySE526I	ACGT	4 cut(s)	147, 1366, 1673, 1717
Hsp92II	CATG	1 cut(s)	483
HspAI	GCGC	1 cut(s)	15
KpnI	GGTACC	1 cut(s)	809
Kzo9I	GATC	5 cut(s)	23, 84, 304, 1093, 1112
LmnI	GCTCC	4 cut(s)	54, 346, 1283, 1291
Lsp1109I	GCAGC	2 cut(s)	709, 1160
LweI	GCATC	1 cut(s)	1052
MabI	ACCWGGT	1 cut(s)	421
MaeI	CTAG	5 cut(s)	372, 726, 741, 821, 1818
MaeII	ACGT	4 cut(s)	147, 1366, 1673, 1717
MaeIII	GTNAC	3 cut(s)	1084, 1372, 1739
MalI	GATC	5 cut(s)	25, 86, 306, 1095, 1114
MboI	GATC	5 cut(s)	23, 84, 304, 1093, 1112
MboII	GAAGA	9 cut(s)	134, 220, 258, 906, 1400, 1511, 1514, 1526, 1532
MfeI	CAATTG	1 cut(s)	771
MflI	RGATCY	1 cut(s)	1112
MhlI	GDGCHC	3 cut(s)	32, 105, 1288
MluCI	AATT	9 cut(s)	430, 442, 469, 655, 771, 1048, 1379, 1391, 1597
MlyI	GAGTC	3 cut(s)	132, 134, 1621
MmeI	TCCRAC	3 cut(s)	368, 1016, 1771
MroXI	GAANNNNTTC	1 cut(s)	1675
MseI	TTAA	2 cut(s)	261, 393
MslI	CAYNNNNRTG	2 cut(s)	1158, 1406
MspA1I	CMGCKG	2 cut(s)	35, 722
MspI	CCGG	2 cut(s)	609, 803
MspR9I	CCNGG	7 cut(s)	201, 423, 462, 609, 610, 1304, 1713
MunI	CAATTG	1 cut(s)	771
MvaI	CCWGG	5 cut(s)	201, 423, 462, 1304, 1713
MwoI	GCNNNNNNNGC	4 cut(s)	526, 592, 619, 761
NciI	CCSGG	2 cut(s)	609, 610
NdeII	GATC	5 cut(s)	23, 84, 304, 1093, 1112
NlaIII	CATG	1 cut(s)	483
NlaIV	GGNNCC	9 cut(s)	163, 489, 807, 861, 871, 1074, 1126, 1442, 1799
NmeAIII	GCCGAG	1 cut(s)	1832
PaqCI	CACCTGC	1 cut(s)	1264
PcsI	WCGNNNNNNNCGW	3 cut(s)	1693, 1702, 1723
PdmI	GAANNNNTTC	1 cut(s)	1675
PfeI	GAWTC	1 cut(s)	41
Pfl23II	CGTACG	2 cut(s)	148, 1054
PfoI	TCCNGGA	1 cut(s)	1711
PkrI	GCNGC	4 cut(s)	37, 724, 1150, 1203
PleI	GAGTC	3 cut(s)	132, 133, 1621
PpsI	GAGTC	3 cut(s)	132, 133, 1621
PshBI	ATTAAT	1 cut(s)	393
Psp124BI	GAGCTC	2 cut(s)	32, 1288
Psp1406I	AACGTT	1 cut(s)	1673
Psp6I	CCWGG	5 cut(s)	199, 421, 460, 1302, 1711
PspEI	GGTNACC	1 cut(s)	1084
PspFI	CCCAGC	2 cut(s)	337, 1037
PspGI	CCWGG	5 cut(s)	199, 421, 460, 1302, 1711
PspLI	CGTACG	2 cut(s)	148, 1054
PspN4I	GGNNCC	9 cut(s)	163, 489, 807, 861, 871, 1074, 1126, 1442, 1799
PsuI	RGATCY	1 cut(s)	1112
PvuII	CAGCTG	1 cut(s)	722
RsaI	GTAC	7 cut(s)	47, 150, 536, 807, 946, 1056, 1634
RsaNI	GTAC	7 cut(s)	46, 149, 535, 806, 945, 1055, 1633
RseI	CAYNNNNRTG	2 cut(s)	1158, 1406
SacI	GAGCTC	2 cut(s)	32, 1288
SaqAI	TTAA	2 cut(s)	261, 393
SatI	GCNGC	4 cut(s)	36, 723, 1149, 1202
Sau3AI	GATC	5 cut(s)	23, 84, 304, 1093, 1112
ScaI	AGTACT	1 cut(s)	946
SchI	GAGTC	3 cut(s)	132, 134, 1621
ScrFI	CCNGG	7 cut(s)	201, 423, 462, 609, 610, 1304, 1713
SduI	GDGCHC	3 cut(s)	32, 105, 1288
SexAI	ACCWGGT	1 cut(s)	421
SfaNI	GCATC	1 cut(s)	1052
SfcI	CTRYAG	3 cut(s)	879, 978, 1119
SinI	GGWCC	4 cut(s)	680, 701, 989, 1709
SmaI	CCCGGG	1 cut(s)	610
SmiMI	CAYNNNNRTG	2 cut(s)	1158, 1406
Sse9I	AATT	9 cut(s)	430, 442, 469, 655, 771, 1048, 1379, 1391, 1597
SsiI	CCGC	7 cut(s)	35, 142, 197, 334, 513, 767, 1202
SspI	AATATT	2 cut(s)	834, 1239
SspMI	CTAG	5 cut(s)	372, 726, 741, 821, 1818
SstI	GAGCTC	2 cut(s)	32, 1288
StyD4I	CCNGG	7 cut(s)	199, 421, 460, 607, 608, 1302, 1711
StyI	CCWWGG	1 cut(s)	436
TaaI	ACNGT	4 cut(s)	153, 949, 1496, 1833
TaiI	ACGT	4 cut(s)	150, 1369, 1676, 1720
TaqI	TCGA	3 cut(s)	26, 1512, 1696
TasI	AATT	9 cut(s)	430, 442, 469, 655, 771, 1048, 1379, 1391, 1597
TatI	WGTACW	2 cut(s)	534, 944
TauI	GCSGC	2 cut(s)	38, 1204
TfiI	GAWTC	1 cut(s)	41
Tru1I	TTAA	2 cut(s)	261, 393
Tru9I	TTAA	2 cut(s)	261, 393
TscAI	CASTG	4 cut(s)	682, 1074, 1390, 1501
TseI	GCWGC	2 cut(s)	722, 1148
TspDTI	ATGAA	3 cut(s)	1424, 1533, 1626
TspGWI	ACGGA	3 cut(s)	221, 1042, 1076
TspMI	CCCGGG	1 cut(s)	608
TspRI	CASTG	4 cut(s)	682, 1074, 1390, 1501
VpaK11BI	GGWCC	4 cut(s)	680, 701, 989, 1709
VspI	ATTAAT	1 cut(s)	393
XapI	RAATTY	4 cut(s)	430, 469, 1379, 1391
XmaI	CCCGGG	1 cut(s)	608
XmiI	GTMKAC	1 cut(s)	1560
XmnI	GAANNNNTTC	1 cut(s)	1675
XspI	CTAG	5 cut(s)	372, 726, 741, 821, 1818
ZrmI	AGTACT	1 cut(s)	946

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.