MD10G1283500.v1.1

Belongs to the TPP enzyme family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0001627
Physical Location & Seq
Reverse (-)
37372307 .. 37375811
3505 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1283500.v1.1.491

Sequence Viewer

Length: 1764 bp
ATGAAAGCTTCTACTCATATCGGCTCAACAAAAGGCGGGGCTCCGCTGCCGGTCCTACCCGCCGCCTCCAGCGGAACGCTGGGCCGCCACCTGGCTCGGCGACTCGTCGAAATCGGAGCCCATGATGTCTTTTCCGTTCCCGGCGACTTCAACTTAACGCTTCTCGACCACCTGATCGCCGAGCCCGGCCTCAACCTCATCGGCTGCTGCAACGAGCTCAACGCCGGTTATGCTGCTGACGGCTACGCGCGCGCCAGGGGGGTTGGAGCGTGCGTCGTTACGTTCACCGTCGGCGGGCTCAGTGTGCTGAACGCGATCGCCGGTGCGTGCAGCGAGAACTTGCCGGTCATCTGCATAGTAGGTGGGCCGAACTCCAACGATTACGGCACGAACCGGATCCTCCACCACACGATCGGGTTGCCCGATTTCACTCAGGAGCTTCGGTGCTTCCAAACCGTCACCTGTCATCAGGCAGTGGTGAACAATTTGGGAGATGCACATGAGCAGATAGACACAGCAATCTCAACAGCATTGAAAGAAAGCAAGCCTGTATACATCAACCTAGGCTGCAACCTGCCTGCAATTCCTCATCCCACATTTGCCAGAGACCCGGTCCCCTTCTTCCTTGCTCCGAAAGTAAGCAACCAATGTGGTTTGGAGGCAGCAGTTGAAGCCACCGCTGCTTTTCTCAACAAGGCTGTGAAACCCGTGATTGTCGGAGGGCCCAAGTTGAGAGTAGCCAAGGCACAGCAGGCCTTTATGGAGTTTGCAGATGCTAGCGGGTACCCGATCACTGTTATGCCCTCTGCTAAGGGTTTGGTGCCCGAGCACCACCCGCATTTCATTGGGACTTATTGGGGTGCTGTGAGCACCACCTTCTGCGGTGAGATTGTGGAGTCTGCTGATGCTTATGTTTTTGTTGGACCCATTTTCAATGATTATAGCTCTGTGGGGTATTCCTTGTTGATCAAGAAGGAGAAAGCGATTGTCGTGCAGCCAAATCGTGTGACAATTGGGGATGGTCCGTCCTTTGGCTGGGTTTTCATGGCGGACTTCTTGAGTGCATTGGCCAAGAAGCTAAAGAAAAACAGTACTGCTGTTGAGAATTACCACCGTATCTTTGTTCCCCATGGCATCCCTCTGAAGAGTGAGAAGGATGAACCTCTGAGGGTCAATATTCTTTTCAAGCACATTCAGGAGATTATCAGTGGAGACTCTGCGATAATTGCCGAAACTGGAGACTCATGGTTCAATTGTCAGAAGCTCCGACTGCCTGAGAATTGCGGGTATGAATTTCAGATGCAGTATGGATCCATTGGATGGTCGGTGGGCGCCACTCTTGGCTATGCTCAGGGTGCCAAAGATAAACGGGTGATCGCTTGCATTGGTGATGGGAGTTTCCAGGTAACTGCACAGGACATTTCTACAATGATCCGATGTGGACAAAACACCATTATATTTCTTATCAACAACGGAGGCTACACAATTGAAGTAGAGATTCACGATGGCCCATACAATGTGATTAAGAACTGGGATTACACCGGCCTTGTCGATGCCATCCACAATGGCGAAGGCAAATGCTGGACCACCAAGGTACGAACGGAGGAGGATTTAACAGAAGCAATTGCCAAGGCAACAGGGGAGCACAAGGATAGTCTATGCTTTATTGAAGTGTTTGTGCACAAGGATGACACTAGCAAAGAGCTGCTGGAATGGGGATCCCGAGTTTCGGCCGCCAACAGCCGACCTCCAAATCCCCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00010 ko01100 ko01110 ko01130 map00010 map01100 map01110 map01130
Pfam Domains
Protein Families
TPP_enzyme_C TPP_enzyme_M TPP_enzyme_N

Protein Analysis

588

Amino Acids

63.2

Weight (kDa)

6.02

Isoelectric Point (pI)

29.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPP_enzyme_N PF02776 26 - 131 9.1e-28 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
TPP_enzyme_M PF00205 223 - 340 1.9e-23 Thiamine pyrophosphate enzyme, central domain
TPP_enzyme_C PF02775 433 - 558 4.3e-15 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 582
Acc65I GGTACC 1 cut(s) 783
AccB1I GGYRCC 4 cut(s) 783, 820, 1331, 1355
AccB7I CCANNNNNTGG 1 cut(s) 1320
AccI GTMKAC 1 cut(s) 552
AccII CGCG 4 cut(s) 248, 250, 252, 314
AclWI GGATC 7 cut(s) 391, 404, 1305, 1318, 1426, 1713, 1726
AcoI YGGCCR 2 cut(s) 1068, 1731
AcsI RAATTY 1 cut(s) 1292
AcuI CTGAAG 1 cut(s) 1163
AcyI GRCGYC 1 cut(s) 1332
AfaI GTAC 3 cut(s) 785, 1093, 1596
AfiI CCNNNNNNNGG 6 cut(s) 91, 294, 1031, 1035, 1320, 1729
AgsI TTSAA 8 cut(s) 151, 535, 671, 934, 1186, 1252, 1490, 1670
AjnI CCWGG 3 cut(s) 90, 254, 1401
AluBI AGCT 7 cut(s) 8, 217, 439, 945, 1078, 1264, 1705
AluI AGCT 7 cut(s) 8, 217, 439, 945, 1078, 1264, 1705
Alw21I GWGCWC 5 cut(s) 219, 831, 872, 1647, 1683
Alw26I GTCTC 3 cut(s) 600, 1206, 1233
Alw44I GTGCAC 1 cut(s) 1679
AlwI GGATC 7 cut(s) 391, 404, 1305, 1318, 1426, 1713, 1726
Ama87I CYCGRG 2 cut(s) 824, 1722
AoxI GGCC 9 cut(s) 82, 187, 365, 722, 753, 1068, 1507, 1543, 1731
ApaI GGGCCC 1 cut(s) 726
ApaLI GTGCAC 1 cut(s) 1679
ApoI RAATTY 1 cut(s) 1292
AsiSI GCGATCGC 1 cut(s) 318
Asp718I GGTACC 1 cut(s) 783
AspA2I CCTAGG 1 cut(s) 562
AspLEI GCGC 4 cut(s) 250, 252, 254, 1334
AsuC2I CCSGG 3 cut(s) 141, 186, 611
AsuHPI GGTGA 6 cut(s) 277, 451, 490, 896, 1384, 1400
AsuNHI GCTAGC 1 cut(s) 776
AvaI CYCGRG 2 cut(s) 824, 1722
AvaII GGWCC 5 cut(s) 52, 613, 923, 1022, 1584
AvrII CCTAGG 1 cut(s) 562
BaeGI GKGCMC 3 cut(s) 726, 825, 1683
BaeI ACNNNNGTAYC 2 cut(s) 1099, 1132
BalI TGGCCA 1 cut(s) 1070
BamHI GGATCC 3 cut(s) 396, 1310, 1718
BanI GGYRCC 4 cut(s) 783, 820, 1331, 1355
BanII GRGCYC 6 cut(s) 43, 121, 186, 219, 300, 726
Bbv12I GWGCWC 5 cut(s) 219, 831, 872, 1647, 1683
BccI CCATC 5 cut(s) 1013, 1314, 1385, 1499, 1565
BceAI ACGGC 2 cut(s) 256, 400
BcgI CGANNNNNNTGC 6 cut(s) 400, 434, 973, 983, 1007, 1017
BciT130I CCWGG 3 cut(s) 92, 256, 1403
BclI TGATCA 1 cut(s) 966
BcnI CCSGG 3 cut(s) 141, 186, 611
BcoDI GTCTC 3 cut(s) 600, 1206, 1233
BfaI CTAG 3 cut(s) 563, 777, 1695
BfoI RGCGCY 1 cut(s) 1335
BfuAI ACCTGC 1 cut(s) 582
BlnI CCTAGG 1 cut(s) 562
BmcAI AGTACT 1 cut(s) 1093
Bme1390I CCNGG 6 cut(s) 92, 141, 186, 256, 611, 1403
Bme18I GGWCC 5 cut(s) 52, 613, 923, 1022, 1584
BmeT110I CYCGRG 2 cut(s) 824, 1722
BmrFI CCNGG 6 cut(s) 92, 141, 186, 256, 611, 1403
BmrI ACTGGG 2 cut(s) 1540, 1753
BmsI GCATC 6 cut(s) 484, 763, 895, 1143, 1290, 1543
BmtI GCTAGC 1 cut(s) 780
BmuI ACTGGG 2 cut(s) 1540, 1753
BpmI CTGGAG 2 cut(s) 52, 1257
Bpu10I CCTNAGC 2 cut(s) 810, 1350
BpuEI CTTGAG 1 cut(s) 1078
BpuMI CCSGG 3 cut(s) 141, 186, 611
BsaHI GRCGYC 1 cut(s) 1332
BsaI GGTCTC 1 cut(s) 600
BsaJI CCNNGG 6 cut(s) 255, 562, 741, 1129, 1590, 1629
BsaWI WCCGGW 1 cut(s) 393
BsaXI ACNNNNNCTCC 4 cut(s) 258, 288, 428, 458
Bsc4I CCNNNNNNNGG 6 cut(s) 91, 294, 1031, 1035, 1320, 1729
Bse118I RCCGGY 5 cut(s) 49, 224, 320, 343, 1541
Bse1I ACTGG 3 cut(s) 1240, 1535, 1759
BseBI CCWGG 3 cut(s) 92, 256, 1403
BseDI CCNNGG 6 cut(s) 255, 562, 741, 1129, 1590, 1629
BseGI GGATG 7 cut(s) 589, 1024, 1134, 1162, 1325, 1557, 1693
BseLI CCNNNNNNNGG 6 cut(s) 91, 294, 1031, 1035, 1320, 1729
BseMII CTCAG 5 cut(s) 313, 446, 1157, 1266, 1364
BseNI ACTGG 3 cut(s) 1240, 1535, 1759
BsePI GCGCGC 2 cut(s) 248, 250
BseRI GAGGAG 1 cut(s) 1619
BseSI GKGCMC 3 cut(s) 726, 825, 1683
BseX3I CGGCCG 1 cut(s) 1731
BseYI CCCAGC 2 cut(s) 79, 1035
BsgI GTGCAG 3 cut(s) 349, 1013, 1395
Bsh1236I CGCG 4 cut(s) 248, 250, 252, 314
Bsh1285I CGRYCG 3 cut(s) 318, 414, 1734
BshFI GGCC 9 cut(s) 84, 189, 367, 724, 755, 1070, 1509, 1545, 1733
BshNI GGYRCC 4 cut(s) 783, 820, 1331, 1355
BsiEI CGRYCG 3 cut(s) 318, 414, 1734
BsiHKAI GWGCWC 5 cut(s) 219, 831, 872, 1647, 1683
BsiHKCI CYCGRG 2 cut(s) 824, 1722
BsiSI CCGG 9 cut(s) 50, 141, 186, 225, 321, 344, 394, 611, 1542
BslFI GGGAC 2 cut(s) 599, 862
BslI CCNNNNNNNGG 6 cut(s) 91, 294, 1031, 1035, 1320, 1729
BsmAI GTCTC 3 cut(s) 600, 1206, 1233
BsmFI GGGAC 2 cut(s) 599, 862
BsnI GGCC 9 cut(s) 84, 189, 367, 724, 755, 1070, 1509, 1545, 1733
Bso31I GGTCTC 1 cut(s) 600
BsoBI CYCGRG 2 cut(s) 824, 1722
Bsp120I GGGCCC 1 cut(s) 722
Bsp19I CCATGG 1 cut(s) 1129
BspANI GGCC 9 cut(s) 84, 189, 367, 724, 755, 1070, 1509, 1545, 1733
BspCNI CTCAG 5 cut(s) 312, 445, 1158, 1267, 1363
BspFNI CGCG 4 cut(s) 248, 250, 252, 314
BspMI ACCTGC 1 cut(s) 582
BspOI GCTAGC 1 cut(s) 780
BspPI GGATC 7 cut(s) 391, 404, 1305, 1318, 1426, 1713, 1726
BspT107I GGYRCC 4 cut(s) 783, 820, 1331, 1355
BspTNI GGTCTC 1 cut(s) 600
BsrFI RCCGGY 5 cut(s) 49, 224, 320, 343, 1541
BsrI ACTGG 3 cut(s) 1240, 1535, 1759
BssAI RCCGGY 5 cut(s) 49, 224, 320, 343, 1541
BssECI CCNNGG 6 cut(s) 255, 562, 741, 1129, 1590, 1629
BssHII GCGCGC 2 cut(s) 248, 250
BssNAI GTATAC 1 cut(s) 553
BssNI GRCGYC 1 cut(s) 1332
BssT1I CCWWGG 5 cut(s) 562, 741, 1129, 1590, 1629
Bst1107I GTATAC 1 cut(s) 553
Bst2UI CCWGG 3 cut(s) 92, 256, 1403
Bst4CI ACNGT 5 cut(s) 289, 457, 796, 1091, 1115
Bst6I CTCTTC 1 cut(s) 1139
BstACI GRCGYC 1 cut(s) 1332
BstDEI CTNAG 6 cut(s) 299, 432, 810, 1166, 1275, 1350
BstDSI CCRYGG 1 cut(s) 1129
BstF5I GGATG 7 cut(s) 589, 1024, 1134, 1162, 1325, 1557, 1693
BstFNI CGCG 4 cut(s) 248, 250, 252, 314
BstH2I RGCGCY 1 cut(s) 1335
BstHHI GCGC 4 cut(s) 250, 252, 254, 1334
BstMAI GTCTC 3 cut(s) 600, 1206, 1233
BstMCI CGRYCG 3 cut(s) 318, 414, 1734
BstNI CCWGG 3 cut(s) 92, 256, 1403
BstSCI CCNGG 6 cut(s) 90, 139, 184, 254, 609, 1401
BstSLI GKGCMC 3 cut(s) 726, 825, 1683
BstUI CGCG 4 cut(s) 248, 250, 252, 314
BstX2I RGATCY 3 cut(s) 396, 1310, 1718
BstYI RGATCY 3 cut(s) 396, 1310, 1718
BstZ17I GTATAC 1 cut(s) 553
BstZI CGGCCG 1 cut(s) 1731
BsuRI GGCC 9 cut(s) 84, 189, 367, 724, 755, 1070, 1509, 1545, 1733
BtgI CCRYGG 1 cut(s) 1129
BtsCI GGATG 7 cut(s) 589, 1024, 1134, 1162, 1325, 1557, 1693
BtsI GCAGTG 1 cut(s) 480
BtsIMutI CAGTG 4 cut(s) 307, 480, 792, 1213
BveI ACCTGC 1 cut(s) 582
CfoI GCGC 4 cut(s) 250, 252, 254, 1334
Cfr10I RCCGGY 5 cut(s) 49, 224, 320, 343, 1541
CseI GACGC 1 cut(s) 262
Csp6I GTAC 3 cut(s) 784, 1092, 1595
CspCI CAANNNNNGTGG 2 cut(s) 631, 666
CviAII CATG 5 cut(s) 122, 500, 1045, 1130, 1245
CviQI GTAC 3 cut(s) 784, 1092, 1595
DdeI CTNAG 6 cut(s) 299, 432, 810, 1166, 1275, 1350
DinI GGCGCC 1 cut(s) 1333
EaeI YGGCCR 2 cut(s) 1068, 1731
EagI CGGCCG 1 cut(s) 1731
Eam1104I CTCTTC 1 cut(s) 1139
EarI CTCTTC 1 cut(s) 1139
EciI GGCGGA 1 cut(s) 1064
Ecl136II GAGCTC 1 cut(s) 217
EclXI CGGCCG 1 cut(s) 1731
Eco130I CCWWGG 5 cut(s) 562, 741, 1129, 1590, 1629
Eco147I AGGCCT 1 cut(s) 755
Eco24I GRGCYC 6 cut(s) 43, 121, 186, 219, 300, 726
Eco31I GGTCTC 1 cut(s) 600
Eco47I GGWCC 5 cut(s) 52, 613, 923, 1022, 1584
Eco52I CGGCCG 1 cut(s) 1731
Eco53kI GAGCTC 1 cut(s) 217
Eco57I CTGAAG 1 cut(s) 1163
Eco88I CYCGRG 2 cut(s) 824, 1722
EcoICRI GAGCTC 1 cut(s) 217
EcoO109I RGGNCCY 1 cut(s) 722
EcoRII CCWGG 3 cut(s) 90, 254, 1401
EcoT14I CCWWGG 5 cut(s) 562, 741, 1129, 1590, 1629
EcoT38I GRGCYC 6 cut(s) 43, 121, 186, 219, 300, 726
EgeI GGCGCC 1 cut(s) 1333
EheI GGCGCC 1 cut(s) 1333
ErhI CCWWGG 5 cut(s) 562, 741, 1129, 1590, 1629
FaeI CATG 5 cut(s) 125, 503, 1048, 1133, 1248
FaqI GGGAC 2 cut(s) 599, 862
FatI CATG 5 cut(s) 121, 499, 1044, 1129, 1244
FauI CCCGC 6 cut(s) 29, 67, 287, 773, 843, 1277
FbaI TGATCA 1 cut(s) 966
FblI GTMKAC 1 cut(s) 552
FokI GGATG 7 cut(s) 576, 1031, 1121, 1169, 1332, 1544, 1700
FriOI GRGCYC 6 cut(s) 43, 121, 186, 219, 300, 726
FspBI CTAG 3 cut(s) 563, 777, 1695
GlaI GCGC 4 cut(s) 249, 251, 253, 1333
GsaI CCCAGC 2 cut(s) 83, 1039
GsuI CTGGAG 2 cut(s) 52, 1257
HaeII RGCGCY 1 cut(s) 1335
HaeIII GGCC 9 cut(s) 84, 189, 367, 724, 755, 1070, 1509, 1545, 1733
HapII CCGG 9 cut(s) 50, 141, 186, 225, 321, 344, 394, 611, 1542
HgaI GACGC 1 cut(s) 262
HhaI GCGC 4 cut(s) 250, 252, 254, 1334
Hin1I GRCGYC 1 cut(s) 1332
Hin1II CATG 5 cut(s) 125, 503, 1048, 1133, 1248
Hin6I GCGC 4 cut(s) 248, 250, 252, 1332
HinP1I GCGC 4 cut(s) 248, 250, 252, 1332
HindIII AAGCTT 1 cut(s) 6
HinfI GANTC 5 cut(s) 102, 896, 1214, 1241, 1498
HpaII CCGG 9 cut(s) 50, 141, 186, 225, 321, 344, 394, 611, 1542
HphI GGTGA 6 cut(s) 277, 451, 490, 896, 1384, 1400
Hpy166II GTNNAC 5 cut(s) 285, 481, 553, 1442, 1681
Hpy188I TCNGA 9 cut(s) 116, 633, 719, 1143, 1167, 1260, 1268, 1299, 1436
Hpy188III TCNNGA 7 cut(s) 164, 434, 970, 1057, 1196, 1502, 1722
Hpy8I GTNNAC 5 cut(s) 285, 481, 553, 1442, 1681
Hpy99I CGWCG 3 cut(s) 110, 278, 293
HpyAV CCTTC 5 cut(s) 628, 886, 967, 1147, 1565
HpyCH4III ACNGT 5 cut(s) 289, 457, 796, 1091, 1115
HpyCH4IV ACGT 1 cut(s) 281
HpyF3I CTNAG 6 cut(s) 299, 432, 810, 1166, 1275, 1350
HpySE526I ACGT 1 cut(s) 281
Hsp92I GRCGYC 1 cut(s) 1332
Hsp92II CATG 5 cut(s) 125, 503, 1048, 1133, 1248
HspAI GCGC 4 cut(s) 248, 250, 252, 1332
KasI GGCGCC 1 cut(s) 1331
KpnI GGTACC 1 cut(s) 787
Ksp22I TGATCA 1 cut(s) 966
LmnI GCTCC 7 cut(s) 46, 116, 266, 436, 634, 1269, 1642
LweI GCATC 6 cut(s) 484, 763, 895, 1143, 1290, 1543
MaeI CTAG 3 cut(s) 563, 777, 1695
MaeII ACGT 1 cut(s) 281
MaeIII GTNAC 4 cut(s) 277, 457, 1006, 1405
MauBI CGCGCGCG 1 cut(s) 248
MboII GAAGA 2 cut(s) 613, 1156
MfeI CAATTG 4 cut(s) 1011, 1252, 1485, 1623
MflI RGATCY 3 cut(s) 396, 1310, 1718
MlsI TGGCCA 1 cut(s) 1070
MluNI TGGCCA 1 cut(s) 1070
Mly113I GGCGCC 1 cut(s) 1332
MlyI GAGTC 4 cut(s) 96, 905, 1208, 1235
MmeI TCCRAC 5 cut(s) 244, 399, 697, 901, 1291
Mox20I TGGCCA 1 cut(s) 1070
MscI TGGCCA 1 cut(s) 1070
MseI TTAA 3 cut(s) 155, 1524, 1613
MslI CAYNNNNRTG 2 cut(s) 797, 1686
Msp20I TGGCCA 1 cut(s) 1070
MspA1I CMGCKG 3 cut(s) 46, 72, 680
MspI CCGG 9 cut(s) 50, 141, 186, 225, 321, 344, 394, 611, 1542
MspR9I CCNGG 6 cut(s) 92, 141, 186, 256, 611, 1403
MunI CAATTG 4 cut(s) 1011, 1252, 1485, 1623
MvaI CCWGG 3 cut(s) 92, 256, 1403
MvnI CGCG 4 cut(s) 248, 250, 252, 314
NarI GGCGCC 1 cut(s) 1332
NciI CCSGG 3 cut(s) 141, 186, 611
NcoI CCATGG 1 cut(s) 1129
NheI GCTAGC 1 cut(s) 776
NlaIII CATG 5 cut(s) 125, 503, 1048, 1133, 1248
NmeAIII GCCGAG 2 cut(s) 76, 205
NmuCI GTSAC 2 cut(s) 457, 1006
PauI GCGCGC 2 cut(s) 248, 250
PceI AGGCCT 1 cut(s) 755
PcsI WCGNNNNNNNCGW 1 cut(s) 420
PfeI GAWTC 1 cut(s) 1498
PflFI GACNNNGTC 1 cut(s) 611
PflMI CCANNNNNTGG 1 cut(s) 1320
Ple19I CGATCG 2 cut(s) 318, 414
PleI GAGTC 4 cut(s) 96, 904, 1208, 1235
PluTI GGCGCC 1 cut(s) 1335
PpsI GAGTC 4 cut(s) 96, 904, 1208, 1235
Psp124BI GAGCTC 1 cut(s) 219
Psp6I CCWGG 3 cut(s) 90, 254, 1401
PspFI CCCAGC 2 cut(s) 79, 1035
PspGI CCWGG 3 cut(s) 90, 254, 1401
PspOMI GGGCCC 1 cut(s) 722
PsrI GAACNNNNNNTAC 2 cut(s) 1520, 1552
PsuI RGATCY 3 cut(s) 396, 1310, 1718
PsyI GACNNNGTC 1 cut(s) 611
PteI GCGCGC 2 cut(s) 248, 250
PvuI CGATCG 2 cut(s) 318, 414
RgaI GCGATCGC 1 cut(s) 318
RsaI GTAC 3 cut(s) 785, 1093, 1596
RsaNI GTAC 3 cut(s) 784, 1092, 1595
RseI CAYNNNNRTG 2 cut(s) 797, 1686
SacI GAGCTC 1 cut(s) 219
SaqAI TTAA 3 cut(s) 155, 1524, 1613
ScaI AGTACT 1 cut(s) 1093
SchI GAGTC 4 cut(s) 96, 905, 1208, 1235
ScrFI CCNGG 6 cut(s) 92, 141, 186, 256, 611, 1403
SfaAI GCGATCGC 1 cut(s) 318
SfaNI GCATC 6 cut(s) 484, 763, 895, 1143, 1290, 1543
SfoI GGCGCC 1 cut(s) 1333
SgfI GCGATCGC 1 cut(s) 318
SgrAI CRCCGGYG 1 cut(s) 320
SinI GGWCC 5 cut(s) 52, 613, 923, 1022, 1584
SmiMI CAYNNNNRTG 2 cut(s) 797, 1686
SmlI CTYRAG 1 cut(s) 1057
SmoI CTYRAG 1 cut(s) 1057
SseBI AGGCCT 1 cut(s) 755
SspDI GGCGCC 1 cut(s) 1331
SspI AATATT 1 cut(s) 1177
SspMI CTAG 3 cut(s) 563, 777, 1695
SstI GAGCTC 1 cut(s) 219
StuI AGGCCT 1 cut(s) 755
StyD4I CCNGG 6 cut(s) 90, 139, 184, 254, 609, 1401
StyI CCWWGG 5 cut(s) 562, 741, 1129, 1590, 1629
TaaI ACNGT 5 cut(s) 289, 457, 796, 1091, 1115
TaiI ACGT 1 cut(s) 284
TaqI TCGA 3 cut(s) 108, 165, 1551
TatI WGTACW 1 cut(s) 1091
TauI GCSGC 3 cut(s) 65, 87, 1736
TfiI GAWTC 1 cut(s) 1498
Tru1I TTAA 3 cut(s) 155, 1524, 1613
Tru9I TTAA 3 cut(s) 155, 1524, 1613
TscAI CASTG 4 cut(s) 307, 480, 799, 1213
TseFI GTSAC 2 cut(s) 457, 1006
Tsp45I GTSAC 2 cut(s) 457, 1006
TspDTI ATGAA 5 cut(s) 17, 832, 1033, 1173, 1305
TspGWI ACGGA 4 cut(s) 124, 1014, 1488, 1616
TspRI CASTG 4 cut(s) 307, 480, 799, 1213
Tth111I GACNNNGTC 1 cut(s) 611
Van91I CCANNNNNTGG 1 cut(s) 1320
VneI GTGCAC 1 cut(s) 1679
VpaK11BI GGWCC 5 cut(s) 52, 613, 923, 1022, 1584
XapI RAATTY 1 cut(s) 1292
XcmI CCANNNNNNNNNTGG 1 cut(s) 76
XmaJI CCTAGG 1 cut(s) 562
XmiI GTMKAC 1 cut(s) 552
XspI CTAG 3 cut(s) 563, 777, 1695
ZrmI AGTACT 1 cut(s) 1093
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.