Rmu_sc0007961.1_g000016

Belongs to the TPP enzyme family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007961.1
OG0001627
Physical Location & Seq
Reverse (-)
56079 .. 61620
5542 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007961.1_g000016.1.cds

Sequence Viewer

Length: 2424 bp
atgtcggaatctaggactccagttacccaaggaacggaaggtttgcgactctcggagtacgtgagagaaagcatcggaatccaggtaggggattcaggactctcctcgatactgtgcactagtgacgggacaatagcggacggagctgggtgtgcggaacaagttcgagagagagaaaccataggagacttcaccggagccccgtcaccggccacgggagtccggtcaccggtggctggaatccggtcaccgatcgccggatttcgaccaccgaacgtcgtcttcaggcgagtggtggtgagccaaaatccaatgggaaataacgaaatcgagcttacacaggcgagaggacacaacgatgaagccacccacgacgataaagccgcccacgacgacgaagccgagggaggagagagagcacgtggcaaggaatctggcaccgactatctgagccaagagaaaatcgcagtgataaaaaatgagtcggcgacgaggagagagtccggcaccggcgatctgcacggagagaaaatcacagcgatcaaaaacgatgcgcaatcgcacacaaccccaagtcctcatttgtttctgtcattcctcgatcctccaatggcgactggccttggctccctagagtttaccaggcccaccaacaacaacgtgggctgccctccccaaaacggcgccgctgcactccacgaccaccctccctccactatctcctcccctgactccaccctcggccgccacctggcacaccgcctcgtggaggtgggtgtcactgacgtgttctctgtccctggtgactttaacctaacccttcttgaccacctcattgccgagccggggctcaccaacattggttgctgcaatgagctcaatgctggctacgccgcggatgggtacgcccggtcacgcggggtaggggcttgtgtggtcacgtttactgtgggtgggcttagtgtgcttaatgccattgctggggcatatagtgagaatctacctgtgatttgtgttgttggaggacctaacacaaatgattatggcaccaacagaattcttcaccacactatcggcttggcggattttagccaagaactcaggtgcttccagtctgtcacatgctatcaagctgtggtgaacaacttggaagatgcacatgagcagattgatacagccatttctactgctctcaagcaaagcaagcctgtctatattagcattagttgtaacttgcctgggatttcacatccaacttttggcagagagcctattccattttcattgtcacctagaatgagtaaccagagggggctagaggcagctgtggatgcagcagcagctttcctaaacaaggcggtgaagccggtcatggttggaggaccaaaactccgagttgcaaaagcccatgaagcgtttatcgaattggctgatgccagtggctatgccctggctgtgatgccatcagccaaaggccatgtggtggaaacccatcctcacttcatcgggacatactggggggcagtgggcactgcctactgtggtgagattgtggagtcagctgatgcgtacgtatttgttggcccaattttcaatgactacagctctgttgggtactcactccttcttaagaaggagaaggccatcattgtgcagcctgatcgcgtggttatagccaatggcccttctttcgggtgtgttctaatgaaggactttctccaggcacttgcaaagaagatcacacgcaacactactgcttatgagaattaccacagaatctttgtcccggaaggccagcctgtcaaatctgagcctaatgagcctttgagagtgaatgttctgttccaacatattcagaaaatgctttcagctgatacagctgtgattgctgagactggtgattcttggtttaactgccagaaactgaagttgccagaaggatgtgggtacgaattccagatgcaatatggttcgattgggtggtctgttggtggaactcttggatatgcacaggcagtaccgaagaagcgtgtcattgcttgcattggtgatggtagctttcaggtgactgcacaagatgtgtcaactatgatcagatgtaatcaaaagagcatcattttcctcataaacaatggtggatacacaatagaagtcgaaatccatgacgggccttacaatgtgatcaagaactggaactacactggtttagtggatgcaatccacaatggtgaaggaaattgctggacaaccaaggtacgcactgaagaggaccttacagaagccattgcaacagcaacaggggacaagaaagactgcttgtgcttcatagaagtcattgttcacagggatgacacaagcaaagagctacttgaatggggttccagggtctcttccgccaatagccgcccaccaaatccgcaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00010 ko01100 ko01110 ko01130 map00010 map01100 map01110 map01130
Pfam Domains
Protein Families
TPP_enzyme_C TPP_enzyme_M TPP_enzyme_N

Protein Analysis

807

Amino Acids

86.63

Weight (kDa)

5.52

Isoelectric Point (pI)

34.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 555
AccB1I GGYRCC 4 cut(s) 437, 506, 683, 1046
AccB7I CCANNNNNTGG 2 cut(s) 1259, 1483
AccII CGCG 3 cut(s) 896, 918, 1665
AclWI GGATC 1 cut(s) 596
AcoI YGGCCR 2 cut(s) 210, 742
AcsI RAATTY 2 cut(s) 1056, 1952
AcuI CTGAAG 3 cut(s) 268, 1946, 2283
AcvI CACGTG 1 cut(s) 422
AcyI GRCGYC 1 cut(s) 684
AfaI GTAC 7 cut(s) 59, 905, 1571, 1616, 1949, 2019, 2256
AflII CTTAAG 1 cut(s) 1628
AflIII ACRYGT 1 cut(s) 786
AgeI ACCGGT 1 cut(s) 229
AgsI TTSAA 2 cut(s) 1594, 2372
AhlI ACTAGT 1 cut(s) 119
AjiI CACGTC 1 cut(s) 787
AjnI CCWGG 8 cut(s) 81, 641, 750, 799, 1237, 1449, 1719, 2381
AleI CACNNNNGTG 2 cut(s) 785, 2226
Alw21I GWGCWC 3 cut(s) 119, 421, 879
Alw26I GTCTC 3 cut(s) 180, 1886, 2392
Alw44I GTGCAC 1 cut(s) 115
AlwI GGATC 1 cut(s) 596
AlwNI CAGNNNCTG 1 cut(s) 1924
ApaLI GTGCAC 1 cut(s) 115
ApeKI GCWGC 8 cut(s) 666, 689, 867, 1322, 1334, 1337, 1340, 1654
ApoI RAATTY 2 cut(s) 1056, 1952
AsiGI ACCGGT 1 cut(s) 229
Asp700I GAANNNNTTC 1 cut(s) 162
AspLEI GCGC 2 cut(s) 556, 686
AspS9I GGNCC 7 cut(s) 645, 1025, 1382, 1583, 1682, 2168, 2269
AsuC2I CCSGG 3 cut(s) 846, 910, 1787
AvaII GGWCC 3 cut(s) 1025, 1382, 2269
BaeGI GKGCMC 2 cut(s) 119, 1532
BaeI ACNNNNGTAYC 2 cut(s) 1866, 1899
BanI GGYRCC 4 cut(s) 437, 506, 683, 1046
BanII GRGCYC 3 cut(s) 202, 852, 879
BauI CACGAG 1 cut(s) 764
BbrPI CACGTG 1 cut(s) 422
BbsI GAAGAC 1 cut(s) 274
Bbv12I GWGCWC 3 cut(s) 119, 421, 879
BbvI GCAGC 8 cut(s) 653, 676, 854, 1334, 1346, 1349, 1352, 1666
BccI CCATC 5 cut(s) 893, 1471, 1500, 1652, 2045
BceAI ACGGC 1 cut(s) 697
BcgI CGANNNNNNTGC 2 cut(s) 1643, 1677
BciT130I CCWGG 8 cut(s) 83, 643, 752, 801, 1239, 1451, 1721, 2383
BciVI GTATCC 1 cut(s) 2132
BclI TGATCA 2 cut(s) 2091, 2181
BcnI CCSGG 3 cut(s) 846, 910, 1787
BcoDI GTCTC 3 cut(s) 180, 1886, 2392
BcuI ACTAGT 1 cut(s) 119
BfaI CTAG 5 cut(s) 12, 120, 632, 1293, 1316
BfmI CTRYAG 1 cut(s) 1600
BfoI RGCGCY 1 cut(s) 687
BfrI CTTAAG 1 cut(s) 1628
BfuI GTATCC 1 cut(s) 2132
Bme18I GGWCC 3 cut(s) 1025, 1382, 2269
BmgBI CACGTC 1 cut(s) 787
BmgT120I GGNCC 7 cut(s) 645, 1025, 1382, 1583, 1682, 2168, 2269
BmiI GGNNCC 7 cut(s) 199, 439, 508, 628, 685, 1048, 2380
BmrI ACTGGG 1 cut(s) 1525
BmuI ACTGGG 1 cut(s) 1525
BpiI GAAGAC 1 cut(s) 274
BpmI CTGGAG 1 cut(s) 1703
BpuEI CTTGAG 1 cut(s) 1178
BpuMI CCSGG 3 cut(s) 846, 910, 1787
BsaAI YACGTR 3 cut(s) 61, 422, 1573
BsaHI GRCGYC 1 cut(s) 684
BsaI GGTCTC 1 cut(s) 2392
BsaWI WCCGGW 4 cut(s) 194, 222, 229, 243
BsaXI ACNNNNNCTCC 4 cut(s) 695, 725, 1374, 1404
Bse118I RCCGGY 4 cut(s) 208, 229, 509, 1366
Bse1I ACTGG 8 cut(s) 20, 622, 1111, 1437, 1520, 1900, 2195, 2206
Bse3DI GCAATG 5 cut(s) 834, 877, 975, 2034, 2283
BseBI CCWGG 8 cut(s) 83, 643, 752, 801, 1239, 1451, 1721, 2383
BseGI GGATG 7 cut(s) 904, 1249, 1336, 1492, 1946, 2218, 2353
BseMI GCAATG 5 cut(s) 834, 877, 975, 2034, 2283
BseMII CTCAG 4 cut(s) 440, 1114, 1800, 1881
BseNI ACTGG 8 cut(s) 20, 622, 1111, 1437, 1520, 1900, 2195, 2206
BseRI GAGGAG 4 cut(s) 94, 423, 508, 712
BseSI GKGCMC 2 cut(s) 119, 1532
BseX3I CGGCCG 1 cut(s) 742
BseXI GCAGC 8 cut(s) 653, 676, 854, 1334, 1346, 1349, 1352, 1666
BseYI CCCAGC 2 cut(s) 146, 980
BsgI GTGCAG 4 cut(s) 503, 675, 1673, 2055
Bsh1236I CGCG 3 cut(s) 896, 918, 1665
Bsh1285I CGRYCG 2 cut(s) 255, 745
BshNI GGYRCC 4 cut(s) 437, 506, 683, 1046
BshTI ACCGGT 1 cut(s) 229
BsiEI CGRYCG 2 cut(s) 255, 745
BsiHKAI GWGCWC 3 cut(s) 119, 421, 879
BsiWI CGTACG 1 cut(s) 1569
BslFI GGGAC 5 cut(s) 142, 782, 1522, 1769, 2315
BsmAI GTCTC 3 cut(s) 180, 1886, 2392
BsmFI GGGAC 5 cut(s) 142, 782, 1522, 1769, 2315
Bso31I GGTCTC 1 cut(s) 2392
Bsp1286I GDGCHC 6 cut(s) 119, 202, 421, 852, 879, 1532
Bsp143I GATC 8 cut(s) 252, 514, 540, 601, 1660, 1737, 2091, 2181
BspCNI CTCAG 4 cut(s) 441, 1113, 1801, 1882
BspFNI CGCG 3 cut(s) 896, 918, 1665
BspLI GGNNCC 7 cut(s) 199, 439, 508, 628, 685, 1048, 2380
BspPI GGATC 1 cut(s) 596
BspT107I GGYRCC 4 cut(s) 437, 506, 683, 1046
BspTI CTTAAG 1 cut(s) 1628
BspTNI GGTCTC 1 cut(s) 2392
BsrDI GCAATG 5 cut(s) 834, 877, 975, 2034, 2283
BsrFI RCCGGY 4 cut(s) 208, 229, 509, 1366
BsrI ACTGG 8 cut(s) 20, 622, 1111, 1437, 1520, 1900, 2195, 2206
BssAI RCCGGY 4 cut(s) 208, 229, 509, 1366
BssMI GATC 8 cut(s) 252, 514, 540, 601, 1660, 1737, 2091, 2181
BssNI GRCGYC 1 cut(s) 684
BssSI CACGAG 1 cut(s) 764
BssT1I CCWWGG 3 cut(s) 28, 622, 2250
Bst2BI CACGAG 1 cut(s) 764
Bst2UI CCWGG 8 cut(s) 83, 643, 752, 801, 1239, 1451, 1721, 2383
Bst4CI ACNGT 3 cut(s) 114, 949, 1541
Bst6I CTCTTC 2 cut(s) 2259, 2395
BstACI GRCGYC 1 cut(s) 684
BstAFI CTTAAG 1 cut(s) 1628
BstBAI YACGTR 3 cut(s) 61, 422, 1573
BstC8I GCNNGC 4 cut(s) 886, 1205, 1796, 2041
BstDEI CTNAG 5 cut(s) 449, 959, 1100, 1809, 1890
BstDSI CCRYGG 2 cut(s) 213, 894
BstEII GGTNACC 2 cut(s) 225, 246
BstENI CCTNNNNNAGG 2 cut(s) 767, 1352
BstF5I GGATG 7 cut(s) 904, 1249, 1336, 1492, 1946, 2218, 2353
BstFNI CGCG 3 cut(s) 896, 918, 1665
BstH2I RGCGCY 1 cut(s) 687
BstHHI GCGC 2 cut(s) 556, 686
BstKTI GATC 8 cut(s) 255, 517, 543, 604, 1663, 1740, 2094, 2184
BstMAI GTCTC 3 cut(s) 180, 1886, 2392
BstMBI GATC 8 cut(s) 252, 514, 540, 601, 1660, 1737, 2091, 2181
BstMCI CGRYCG 2 cut(s) 255, 745
BstNI CCWGG 8 cut(s) 83, 643, 752, 801, 1239, 1451, 1721, 2383
BstNSI RCATGY 1 cut(s) 1125
BstPI GGTNACC 2 cut(s) 225, 246
BstSFI CTRYAG 1 cut(s) 1600
BstSLI GKGCMC 2 cut(s) 119, 1532
BstSNI TACGTA 1 cut(s) 1573
BstUI CGCG 3 cut(s) 896, 918, 1665
BstV1I GCAGC 8 cut(s) 653, 676, 854, 1334, 1346, 1349, 1352, 1666
BstV2I GAAGAC 1 cut(s) 274
BstZI CGGCCG 1 cut(s) 742
BsuI GTATCC 1 cut(s) 2132
BtgI CCRYGG 2 cut(s) 213, 894
BtrI CACGTC 1 cut(s) 787
BtsCI GGATG 7 cut(s) 904, 1249, 1336, 1492, 1946, 2218, 2353
BtsI GCAGTG 3 cut(s) 474, 1530, 1530
BtsIMutI CAGTG 7 cut(s) 474, 780, 1444, 1530, 1530, 2199, 2259
Cac8I GCNNGC 4 cut(s) 886, 1205, 1796, 2041
CaiI CAGNNNCTG 1 cut(s) 1924
CfoI GCGC 2 cut(s) 556, 686
Cfr10I RCCGGY 4 cut(s) 208, 229, 509, 1366
Cfr13I GGNCC 7 cut(s) 645, 1025, 1382, 1583, 1682, 2168, 2269
Cfr42I CCGCGG 1 cut(s) 897
Csp6I GTAC 7 cut(s) 58, 904, 1570, 1615, 1948, 2018, 2255
CspAI ACCGGT 1 cut(s) 229
CviAII CATG 6 cut(s) 1122, 1160, 1372, 1409, 1478, 2162
CviQI GTAC 7 cut(s) 58, 904, 1570, 1615, 1948, 2018, 2255
DdeI CTNAG 5 cut(s) 449, 959, 1100, 1809, 1890
DinI GGCGCC 1 cut(s) 685
DpnI GATC 8 cut(s) 254, 516, 542, 603, 1662, 1739, 2093, 2183
DpnII GATC 8 cut(s) 252, 514, 540, 601, 1660, 1737, 2091, 2181
EaeI YGGCCR 2 cut(s) 210, 742
EagI CGGCCG 1 cut(s) 742
Eam1104I CTCTTC 2 cut(s) 2259, 2395
EarI CTCTTC 2 cut(s) 2259, 2395
EciI GGCGGA 2 cut(s) 1097, 2383
Ecl136II GAGCTC 1 cut(s) 877
EclXI CGGCCG 1 cut(s) 742
Eco105I TACGTA 1 cut(s) 1573
Eco130I CCWWGG 3 cut(s) 28, 622, 2250
Eco24I GRGCYC 3 cut(s) 202, 852, 879
Eco31I GGTCTC 1 cut(s) 2392
Eco47I GGWCC 3 cut(s) 1025, 1382, 2269
Eco52I CGGCCG 1 cut(s) 742
Eco53kI GAGCTC 1 cut(s) 877
Eco57I CTGAAG 3 cut(s) 268, 1946, 2283
Eco72I CACGTG 1 cut(s) 422
Eco91I GGTNACC 2 cut(s) 225, 246
EcoICRI GAGCTC 1 cut(s) 877
EcoNI CCTNNNNNAGG 2 cut(s) 767, 1352
EcoO109I RGGNCCY 2 cut(s) 1025, 2269
EcoO65I GGTNACC 2 cut(s) 225, 246
EcoRI GAATTC 2 cut(s) 1056, 1952
EcoRII CCWGG 8 cut(s) 81, 641, 750, 799, 1237, 1449, 1719, 2381
EcoT14I CCWWGG 3 cut(s) 28, 622, 2250
EcoT38I GRGCYC 3 cut(s) 202, 852, 879
EgeI GGCGCC 1 cut(s) 685
EheI GGCGCC 1 cut(s) 685
ErhI CCWWGG 3 cut(s) 28, 622, 2250
FaeI CATG 6 cut(s) 1125, 1163, 1375, 1412, 1481, 2165
FalI AAGNNNNNCTT 4 cut(s) 2256, 2288, 2352, 2384
FaqI GGGAC 5 cut(s) 142, 782, 1522, 1769, 2315
FatI CATG 6 cut(s) 1121, 1159, 1371, 1408, 1477, 2161
FauI CCCGC 1 cut(s) 911
FbaI TGATCA 2 cut(s) 2091, 2181
FokI GGATG 7 cut(s) 911, 1236, 1343, 1479, 1953, 2225, 2360
FriOI GRGCYC 3 cut(s) 202, 852, 879
FspBI CTAG 5 cut(s) 12, 120, 632, 1293, 1316
FspI TGCGCA 1 cut(s) 555
GlaI GCGC 2 cut(s) 555, 685
GsaI CCCAGC 2 cut(s) 150, 984
GsuI CTGGAG 1 cut(s) 1703
HaeII RGCGCY 1 cut(s) 687
HhaI GCGC 2 cut(s) 556, 686
Hin1I GRCGYC 1 cut(s) 684
Hin1II CATG 6 cut(s) 1125, 1163, 1375, 1412, 1481, 2165
Hin6I GCGC 2 cut(s) 554, 684
HinP1I GCGC 2 cut(s) 554, 684
HincII GTYRAC 1 cut(s) 2085
HindII GTYRAC 1 cut(s) 2085
Hpy166II GTNNAC 6 cut(s) 117, 639, 945, 1141, 2085, 2341
Hpy188I TCNGA 8 cut(s) 7, 55, 77, 450, 1394, 1810, 1857, 2096
Hpy188III TCNNGA 6 cut(s) 96, 167, 824, 1507, 1957, 2185
Hpy8I GTNNAC 6 cut(s) 117, 639, 945, 1141, 2085, 2341
Hpy99I CGWCG 5 cut(s) 281, 377, 395, 398, 493
HpyCH4III ACNGT 3 cut(s) 114, 949, 1541
HpyCH4IV ACGT 7 cut(s) 60, 276, 421, 660, 786, 941, 1572
HpyF3I CTNAG 5 cut(s) 449, 959, 1100, 1809, 1890
HpySE526I ACGT 7 cut(s) 60, 276, 421, 660, 786, 941, 1572
Hsp92I GRCGYC 1 cut(s) 684
Hsp92II CATG 6 cut(s) 1125, 1163, 1375, 1412, 1481, 2165
HspAI GCGC 2 cut(s) 554, 684
KasI GGCGCC 1 cut(s) 683
Ksp22I TGATCA 2 cut(s) 2091, 2181
KspI CCGCGG 1 cut(s) 897
Kzo9I GATC 8 cut(s) 252, 514, 540, 601, 1660, 1737, 2091, 2181
LmnI GCTCC 3 cut(s) 143, 197, 632
Lsp1109I GCAGC 8 cut(s) 653, 676, 854, 1334, 1346, 1349, 1352, 1666
MaeI CTAG 5 cut(s) 12, 120, 632, 1293, 1316
MaeII ACGT 7 cut(s) 60, 276, 421, 660, 786, 941, 1572
MalI GATC 8 cut(s) 254, 516, 542, 603, 1662, 1739, 2093, 2183
MboI GATC 8 cut(s) 252, 514, 540, 601, 1660, 1737, 2091, 2181
MboII GAAGA 7 cut(s) 274, 1052, 1163, 1747, 2035, 2276, 2382
MhlI GDGCHC 6 cut(s) 119, 202, 421, 852, 879, 1532
MluCI AATT 6 cut(s) 1056, 1424, 1587, 1765, 1952, 2236
Mly113I GGCGCC 1 cut(s) 684
MlyI GAGTC 8 cut(s) 10, 42, 93, 228, 491, 509, 725, 1565
MmeI TCCRAC 4 cut(s) 1000, 1277, 1357, 1870
MroXI GAANNNNTTC 1 cut(s) 162
MseI TTAA 4 cut(s) 810, 969, 1629, 1911
MslI CAYNNNNRTG 5 cut(s) 357, 785, 1649, 2226, 2346
MspA1I CMGCKG 6 cut(s) 689, 896, 1325, 1562, 1871, 1880
MspCI CTTAAG 1 cut(s) 1628
MvaI CCWGG 8 cut(s) 83, 643, 752, 801, 1239, 1451, 1721, 2383
MvnI CGCG 3 cut(s) 896, 918, 1665
NarI GGCGCC 1 cut(s) 684
NciI CCSGG 3 cut(s) 846, 910, 1787
NdeII GATC 8 cut(s) 252, 514, 540, 601, 1660, 1737, 2091, 2181
NlaIII CATG 6 cut(s) 1125, 1163, 1375, 1412, 1481, 2165
NlaIV GGNNCC 7 cut(s) 199, 439, 508, 628, 685, 1048, 2380
NmeAIII GCCGAG 3 cut(s) 427, 720, 865
NsbI TGCGCA 1 cut(s) 555
NspI RCATGY 1 cut(s) 1125
OliI CACNNNNGTG 2 cut(s) 785, 2226
PcsI WCGNNNNNNNCGW 1 cut(s) 399
PdmI GAANNNNTTC 1 cut(s) 162
PfeI GAWTC 8 cut(s) 8, 78, 92, 240, 431, 997, 1776, 1901
Pfl23II CGTACG 1 cut(s) 1569
PflMI CCANNNNNTGG 2 cut(s) 1259, 1483
PfoI TCCNGGA 1 cut(s) 1785
PinAI ACCGGT 1 cut(s) 229
Ple19I CGATCG 1 cut(s) 255
PleI GAGTC 8 cut(s) 10, 42, 93, 227, 490, 508, 725, 1564
PluTI GGCGCC 1 cut(s) 687
PmaCI CACGTG 1 cut(s) 422
PmlI CACGTG 1 cut(s) 422
PpsI GAGTC 8 cut(s) 10, 42, 93, 227, 490, 508, 725, 1564
Ppu21I YACGTR 3 cut(s) 61, 422, 1573
PpuMI RGGWCCY 2 cut(s) 1025, 2269
Psp124BI GAGCTC 1 cut(s) 879
Psp5II RGGWCCY 2 cut(s) 1025, 2269
Psp6I CCWGG 8 cut(s) 81, 641, 750, 799, 1237, 1449, 1719, 2381
PspCI CACGTG 1 cut(s) 422
PspEI GGTNACC 2 cut(s) 225, 246
PspFI CCCAGC 2 cut(s) 146, 980
PspGI CCWGG 8 cut(s) 81, 641, 750, 799, 1237, 1449, 1719, 2381
PspLI CGTACG 1 cut(s) 1569
PspN4I GGNNCC 7 cut(s) 199, 439, 508, 628, 685, 1048, 2380
PspPI GGNCC 7 cut(s) 645, 1025, 1382, 1583, 1682, 2168, 2269
PspPPI RGGWCCY 2 cut(s) 1025, 2269
PsrI GAACNNNNNNTAC 2 cut(s) 2180, 2212
PstNI CAGNNNCTG 1 cut(s) 1924
PvuI CGATCG 1 cut(s) 255
PvuII CAGCTG 4 cut(s) 1325, 1562, 1871, 1880
RsaI GTAC 7 cut(s) 59, 905, 1571, 1616, 1949, 2019, 2256
RsaNI GTAC 7 cut(s) 58, 904, 1570, 1615, 1948, 2018, 2255
RseI CAYNNNNRTG 5 cut(s) 357, 785, 1649, 2226, 2346
SacI GAGCTC 1 cut(s) 879
SacII CCGCGG 1 cut(s) 897
SaqAI TTAA 4 cut(s) 810, 969, 1629, 1911
Sau3AI GATC 8 cut(s) 252, 514, 540, 601, 1660, 1737, 2091, 2181
Sau96I GGNCC 7 cut(s) 645, 1025, 1382, 1583, 1682, 2168, 2269
SchI GAGTC 8 cut(s) 10, 42, 93, 228, 491, 509, 725, 1565
SduI GDGCHC 6 cut(s) 119, 202, 421, 852, 879, 1532
SfcI CTRYAG 1 cut(s) 1600
SfoI GGCGCC 1 cut(s) 685
Sfr303I CCGCGG 1 cut(s) 897
SgrAI CRCCGGYG 2 cut(s) 229, 509
SgrBI CCGCGG 1 cut(s) 897
SinI GGWCC 3 cut(s) 1025, 1382, 2269
SmiMI CAYNNNNRTG 5 cut(s) 357, 785, 1649, 2226, 2346
SmlI CTYRAG 2 cut(s) 1193, 1628
SmoI CTYRAG 2 cut(s) 1193, 1628
SnaBI TACGTA 1 cut(s) 1573
SpeI ACTAGT 1 cut(s) 119
Sse9I AATT 6 cut(s) 1056, 1424, 1587, 1765, 1952, 2236
SspDI GGCGCC 1 cut(s) 683
SspMI CTAG 5 cut(s) 12, 120, 632, 1293, 1316
SstI GAGCTC 1 cut(s) 879
StyI CCWWGG 3 cut(s) 28, 622, 2250
TaaI ACNGT 3 cut(s) 114, 949, 1541
TaiI ACGT 7 cut(s) 63, 279, 424, 663, 789, 944, 1575
TaqI TCGA 8 cut(s) 107, 166, 265, 330, 600, 1422, 1973, 2154
TasI AATT 6 cut(s) 1056, 1424, 1587, 1765, 1952, 2236
TauI GCSGC 5 cut(s) 386, 689, 747, 896, 2406
TfiI GAWTC 8 cut(s) 8, 78, 92, 240, 431, 997, 1776, 1901
Tru1I TTAA 4 cut(s) 810, 969, 1629, 1911
Tru9I TTAA 4 cut(s) 810, 969, 1629, 1911
TscAI CASTG 7 cut(s) 474, 787, 1444, 1530, 1537, 2206, 2266
TseI GCWGC 8 cut(s) 666, 689, 867, 1322, 1334, 1337, 1340, 1654
TspDTI ATGAA 6 cut(s) 375, 1272, 1425, 1492, 1721, 2314
TspGWI ACGGA 3 cut(s) 50, 156, 537
TspRI CASTG 7 cut(s) 474, 787, 1444, 1530, 1537, 2206, 2266
Van91I CCANNNNNTGG 2 cut(s) 1259, 1483
Vha464I CTTAAG 1 cut(s) 1628
VneI GTGCAC 1 cut(s) 115
VpaK11BI GGWCC 3 cut(s) 1025, 1382, 2269
XagI CCTNNNNNAGG 2 cut(s) 767, 1352
XapI RAATTY 2 cut(s) 1056, 1952
XceI RCATGY 1 cut(s) 1125
XcmI CCANNNNNNNNNTGG 3 cut(s) 658, 1477, 1964
XmnI GAANNNNTTC 1 cut(s) 162
XspI CTAG 5 cut(s) 12, 120, 632, 1293, 1316
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.