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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G17910 AT5G17910 AT5G17910 |
| fragaria_vesca | FvH4_1g29420 FvH4_1g29420 FvH4_1g29420 FvH4_2g10091 FvH4_2g10092 |
| malus_domestica | MD05G1057800.v1.1 MD12G1015000.v1.1 MD14G1012900.v1.1 |
| prunus_persica | Prupe.7G025700_v2.0.a1 Prupe.7G025700_v2.0.a1 Prupe.7G025700_v2.0.a1 Prupe.8G087600_v2.0.a1 Prupe.8G087600_v2.0.a1 Prupe.8G087600_v2.0.a1 |
| pyrus_communis | pycom05g04890 pycom12g01220 pycom14g01090 |
| rosa_chinensis | RchiOBHm_Chr3g0495491 RchiOBHm_Chr6g0267051 |
| rosa_laevigata | RLG00000014046 RLG00000022616 |
| rosa_multiflora | Rmu_co8285861.1_g000001 Rmu_sc0004755.1_g000026 Rmu_sc0005599.1_g000001 Rmu_sc0006163.1_g000016 Rmu_sc0013804.1_g000006 |
| rosa_roxburghii | Rroxscaffold_6G00390490 Rroxscaffold_7G00201200 |
| rosa_rugosa | Rorug03G0273800 Rorug06G0028700 |
| rosa_samantha | Rh3AG321400 Rh3BG356700 Rh3CG353500 Rh3DG356000 Rh6AG150200 Rh6BG151100 Rh6CG146500 Rh6DG135200 |
| rosa_wichuraiana | Rw3G028090 Rw6G013020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1245 |
| AatII | GACGTC | 1 cut(s) | 170 |
| AbsI | CCTCGAGG | 2 cut(s) | 750, 903 |
| AccB1I | GGYRCC | 1 cut(s) | 2591 |
| AccBSI | CCGCTC | 3 cut(s) | 616, 1022, 4148 |
| AccI | GTMKAC | 4 cut(s) | 842, 2523, 4260, 4331 |
| AccII | CGCG | 1 cut(s) | 344 |
| AccIII | TCCGGA | 1 cut(s) | 33 |
| AclWI | GGATC | 6 cut(s) | 423, 1023, 2275, 2422, 3718, 4497 |
| AcoI | YGGCCR | 1 cut(s) | 220 |
| AcsI | RAATTY | 2 cut(s) | 2996, 3825 |
| AcyI | GRCGYC | 2 cut(s) | 167, 4328 |
| AfaI | GTAC | 8 cut(s) | 128, 234, 689, 1785, 2607, 3594, 4231, 4476 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 348, 1375, 1556, 1557, 2956 |
| AflIII | ACRYGT | 1 cut(s) | 2152 |
| AhlI | ACTAGT | 1 cut(s) | 4385 |
| AjnI | CCWGG | 5 cut(s) | 1555, 2103, 2786, 3027, 3844 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1358, 1390, 3873, 3905 |
| AleI | CACNNNNGTG | 2 cut(s) | 314, 927 |
| Alw21I | GWGCWC | 3 cut(s) | 1359, 1998, 2555 |
| Alw26I | GTCTC | 9 cut(s) | 356, 1638, 1765, 2576, 3385, 3691, 3823, 3973, 4414 |
| AlwI | GGATC | 6 cut(s) | 423, 1023, 2275, 2422, 3718, 4497 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 1007, 3512, 3803, 3953 |
| Ama87I | CYCGRG | 3 cut(s) | 750, 903, 4411 |
| Aor13HI | TCCGGA | 1 cut(s) | 33 |
| AoxI | GGCC | 2 cut(s) | 220, 2043 |
| ApeKI | GCWGC | 9 cut(s) | 106, 671, 835, 1078, 1145, 1738, 1815, 1898, 3370 |
| ApoI | RAATTY | 2 cut(s) | 2996, 3825 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 3156, 3188, 3258, 3290, 3566, 3598, 3989, 4021 |
| AseI | ATTAAT | 1 cut(s) | 4317 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1412, 3117, 4165 |
| AspS9I | GGNCC | 2 cut(s) | 1311, 1721 |
| AsuC2I | CCSGG | 2 cut(s) | 173, 2528 |
| AvaI | CYCGRG | 3 cut(s) | 750, 903, 4411 |
| AvaII | GGWCC | 2 cut(s) | 1311, 1721 |
| AxyI | CCTNAGG | 1 cut(s) | 1732 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 216, 249 |
| BalI | TGGCCA | 1 cut(s) | 222 |
| BanI | GGYRCC | 1 cut(s) | 2591 |
| BanII | GRGCYC | 1 cut(s) | 1359 |
| BbsI | GAAGAC | 3 cut(s) | 738, 891, 2720 |
| Bbv12I | GWGCWC | 3 cut(s) | 1359, 1998, 2555 |
| BbvI | GCAGC | 9 cut(s) | 93, 683, 847, 1065, 1132, 1750, 1827, 1885, 3357 |
| BceAI | ACGGC | 2 cut(s) | 1440, 2743 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 4311, 4345 |
| BciT130I | CCWGG | 5 cut(s) | 1557, 2105, 2788, 3029, 3846 |
| BciVI | GTATCC | 1 cut(s) | 2482 |
| BclI | TGATCA | 6 cut(s) | 532, 634, 679, 778, 931, 2824 |
| BcnI | CCSGG | 2 cut(s) | 173, 2528 |
| BcoDI | GTCTC | 9 cut(s) | 356, 1638, 1765, 2576, 3385, 3691, 3823, 3973, 4414 |
| BcuI | ACTAGT | 1 cut(s) | 4385 |
| BfaI | CTAG | 5 cut(s) | 200, 366, 3101, 3146, 4386 |
| BfmI | CTRYAG | 2 cut(s) | 1899, 3450 |
| BfuI | GTATCC | 1 cut(s) | 2482 |
| BglII | AGATCT | 1 cut(s) | 1903 |
| BlpI | GCTNAGC | 1 cut(s) | 2659 |
| BmcAI | AGTACT | 1 cut(s) | 4231 |
| Bme1390I | CCNGG | 7 cut(s) | 173, 1557, 2105, 2528, 2788, 3029, 3846 |
| Bme18I | GGWCC | 2 cut(s) | 1311, 1721 |
| BmeT110I | CYCGRG | 3 cut(s) | 750, 903, 4411 |
| BmgT120I | GGNCC | 2 cut(s) | 1311, 1721 |
| BmiI | GGNNCC | 5 cut(s) | 205, 1367, 1722, 2109, 2593 |
| BmrFI | CCNGG | 7 cut(s) | 173, 1557, 2105, 2528, 2788, 3029, 3846 |
| BmrI | ACTGGG | 2 cut(s) | 670, 3120 |
| BmuI | ACTGGG | 2 cut(s) | 670, 3120 |
| BpiI | GAAGAC | 3 cut(s) | 738, 891, 2720 |
| BpmI | CTGGAG | 4 cut(s) | 1373, 2475, 4059, 4256 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2659 |
| BpuEI | CTTGAG | 1 cut(s) | 341 |
| BpuMI | CCSGG | 2 cut(s) | 173, 2528 |
| BsaBI | GATNNNNATC | 2 cut(s) | 633, 930 |
| BsaHI | GRCGYC | 2 cut(s) | 167, 4328 |
| BsaI | GGTCTC | 2 cut(s) | 1638, 1765 |
| BsaWI | WCCGGW | 1 cut(s) | 33 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 348, 1375, 1556, 1557, 2956 |
| Bse21I | CCTNAGG | 1 cut(s) | 1732 |
| Bse3DI | GCAATG | 2 cut(s) | 1177, 4329 |
| Bse8I | GATNNNNATC | 2 cut(s) | 633, 930 |
| BseAI | TCCGGA | 1 cut(s) | 33 |
| BseBI | CCWGG | 5 cut(s) | 1557, 2105, 2788, 3029, 3846 |
| BseJI | GATNNNNATC | 2 cut(s) | 633, 930 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 348, 1375, 1556, 1557, 2956 |
| BseMI | GCAATG | 2 cut(s) | 1177, 4329 |
| BseMII | CTCAG | 9 cut(s) | 203, 999, 1110, 3702, 3834, 3978, 3984, 4137, 4326 |
| BseRI | GAGGAG | 7 cut(s) | 738, 891, 2972, 3926, 4073, 4199, 4352 |
| BseXI | GCAGC | 9 cut(s) | 93, 683, 847, 1065, 1132, 1750, 1827, 1885, 3357 |
| BseYI | CCCAGC | 1 cut(s) | 98 |
| BsgI | GTGCAG | 2 cut(s) | 169, 1064 |
| Bsh1236I | CGCG | 1 cut(s) | 344 |
| BshFI | GGCC | 2 cut(s) | 222, 2045 |
| BshNI | GGYRCC | 1 cut(s) | 2591 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1359, 1998, 2555 |
| BsiHKCI | CYCGRG | 3 cut(s) | 750, 903, 4411 |
| BsiSI | CCGG | 4 cut(s) | 34, 173, 2046, 2527 |
| BslFI | GGGAC | 6 cut(s) | 154, 1108, 1734, 2653, 2927, 3111 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 348, 1375, 1556, 1557, 2956 |
| BsmAI | GTCTC | 9 cut(s) | 356, 1638, 1765, 2576, 3385, 3691, 3823, 3973, 4414 |
| BsmFI | GGGAC | 6 cut(s) | 154, 1108, 1734, 2653, 2927, 3111 |
| BsnI | GGCC | 2 cut(s) | 222, 2045 |
| Bso31I | GGTCTC | 2 cut(s) | 1638, 1765 |
| BsoBI | CYCGRG | 3 cut(s) | 750, 903, 4411 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1359, 1998, 2555 |
| Bsp13I | TCCGGA | 1 cut(s) | 33 |
| Bsp1407I | TGTACA | 1 cut(s) | 126 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2659 |
| Bsp19I | CCATGG | 2 cut(s) | 1126, 2802 |
| BspANI | GGCC | 2 cut(s) | 222, 2045 |
| BspCNI | CTCAG | 9 cut(s) | 204, 1000, 1109, 3701, 3833, 3979, 3983, 4136, 4327 |
| BspEI | TCCGGA | 1 cut(s) | 33 |
| BspFNI | CGCG | 1 cut(s) | 344 |
| BspHI | TCATGA | 3 cut(s) | 769, 1132, 4093 |
| BspLI | GGNNCC | 5 cut(s) | 205, 1367, 1722, 2109, 2593 |
| BspMAI | CTGCAG | 1 cut(s) | 1903 |
| BspPI | GGATC | 6 cut(s) | 423, 1023, 2275, 2422, 3718, 4497 |
| BspQI | GCTCTTC | 1 cut(s) | 1393 |
| BspT107I | GGYRCC | 1 cut(s) | 2591 |
| BspTNI | GGTCTC | 2 cut(s) | 1638, 1765 |
| BsrBI | CCGCTC | 3 cut(s) | 616, 1022, 4148 |
| BsrDI | GCAATG | 2 cut(s) | 1177, 4329 |
| BsrGI | TGTACA | 1 cut(s) | 126 |
| BssNAI | GTATAC | 1 cut(s) | 843 |
| BssNI | GRCGYC | 2 cut(s) | 167, 4328 |
| BssT1I | CCWWGG | 5 cut(s) | 1126, 1583, 1680, 2301, 2802 |
| Bst1107I | GTATAC | 1 cut(s) | 843 |
| Bst2UI | CCWGG | 5 cut(s) | 1557, 2105, 2788, 3029, 3846 |
| Bst6I | CTCTTC | 7 cut(s) | 246, 476, 557, 1393, 2184, 2226, 3237 |
| BstACI | GRCGYC | 2 cut(s) | 167, 4328 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 3512, 3803, 3953 |
| BstAUI | TGTACA | 1 cut(s) | 126 |
| BstC8I | GCNNGC | 3 cut(s) | 1113, 1177, 3310 |
| BstDSI | CCRYGG | 4 cut(s) | 342, 1126, 1210, 2802 |
| BstEII | GGTNACC | 2 cut(s) | 259, 1542 |
| BstFNI | CGCG | 1 cut(s) | 344 |
| BstMAI | GTCTC | 9 cut(s) | 356, 1638, 1765, 2576, 3385, 3691, 3823, 3973, 4414 |
| BstNI | CCWGG | 5 cut(s) | 1557, 2105, 2788, 3029, 3846 |
| BstNSI | RCATGY | 2 cut(s) | 2156, 2612 |
| BstPI | GGTNACC | 2 cut(s) | 259, 1542 |
| BstSCI | CCNGG | 7 cut(s) | 171, 1555, 2103, 2526, 2786, 3027, 3844 |
| BstSFI | CTRYAG | 2 cut(s) | 1899, 3450 |
| BstUI | CGCG | 1 cut(s) | 344 |
| BstV1I | GCAGC | 9 cut(s) | 93, 683, 847, 1065, 1132, 1750, 1827, 1885, 3357 |
| BstV2I | GAAGAC | 3 cut(s) | 738, 891, 2720 |
| BstX2I | RGATCY | 3 cut(s) | 1903, 2427, 4489 |
| BstYI | RGATCY | 3 cut(s) | 1903, 2427, 4489 |
| BstZ17I | GTATAC | 1 cut(s) | 843 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1732 |
| BsuI | GTATCC | 1 cut(s) | 2482 |
| BsuRI | GGCC | 2 cut(s) | 222, 2045 |
| BtgI | CCRYGG | 4 cut(s) | 342, 1126, 1210, 2802 |
| BtgZI | GCGATG | 2 cut(s) | 516, 3620 |
| BtsI | GCAGTG | 6 cut(s) | 186, 794, 947, 964, 1186, 4050 |
| Cac8I | GCNNGC | 3 cut(s) | 1113, 1177, 3310 |
| CaiI | CAGNNNCTG | 4 cut(s) | 1007, 3512, 3803, 3953 |
| CciI | TCATGA | 3 cut(s) | 769, 1132, 4093 |
| Cfr13I | GGNCC | 2 cut(s) | 1311, 1721 |
| Cfr42I | CCGCGG | 1 cut(s) | 345 |
| CseI | GACGC | 3 cut(s) | 2374, 3147, 4317 |
| Csp6I | GTAC | 8 cut(s) | 127, 233, 688, 1784, 2606, 3593, 4230, 4475 |
| CviQI | GTAC | 8 cut(s) | 127, 233, 688, 1784, 2606, 3593, 4230, 4475 |
| DraI | TTTAAA | 3 cut(s) | 3009, 3339, 4272 |
| EaeI | YGGCCR | 1 cut(s) | 220 |
| Eam1104I | CTCTTC | 7 cut(s) | 246, 476, 557, 1393, 2184, 2226, 3237 |
| EarI | CTCTTC | 7 cut(s) | 246, 476, 557, 1393, 2184, 2226, 3237 |
| Ecl136II | GAGCTC | 1 cut(s) | 1357 |
| Eco130I | CCWWGG | 5 cut(s) | 1126, 1583, 1680, 2301, 2802 |
| Eco24I | GRGCYC | 1 cut(s) | 1359 |
| Eco31I | GGTCTC | 2 cut(s) | 1638, 1765 |
| Eco32I | GATATC | 5 cut(s) | 1959, 2296, 2686, 3499, 4102 |
| Eco47I | GGWCC | 2 cut(s) | 1311, 1721 |
| Eco53kI | GAGCTC | 1 cut(s) | 1357 |
| Eco81I | CCTNAGG | 1 cut(s) | 1732 |
| Eco88I | CYCGRG | 3 cut(s) | 750, 903, 4411 |
| Eco91I | GGTNACC | 2 cut(s) | 259, 1542 |
| EcoICRI | GAGCTC | 1 cut(s) | 1357 |
| EcoO65I | GGTNACC | 2 cut(s) | 259, 1542 |
| EcoRII | CCWGG | 5 cut(s) | 1555, 2103, 2786, 3027, 3844 |
| EcoRV | GATATC | 5 cut(s) | 1959, 2296, 2686, 3499, 4102 |
| EcoT14I | CCWWGG | 5 cut(s) | 1126, 1583, 1680, 2301, 2802 |
| EcoT22I | ATGCAT | 3 cut(s) | 385, 2614, 3874 |
| EcoT38I | GRGCYC | 1 cut(s) | 1359 |
| ErhI | CCWWGG | 5 cut(s) | 1126, 1583, 1680, 2301, 2802 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1783, 1815, 3105, 3137 |
| FaqI | GGGAC | 6 cut(s) | 154, 1108, 1734, 2653, 2927, 3111 |
| FauNDI | CATATG | 1 cut(s) | 1519 |
| FbaI | TGATCA | 6 cut(s) | 532, 634, 679, 778, 931, 2824 |
| FblI | GTMKAC | 4 cut(s) | 842, 2523, 4260, 4331 |
| FriOI | GRGCYC | 1 cut(s) | 1359 |
| FspBI | CTAG | 5 cut(s) | 200, 366, 3101, 3146, 4386 |
| GsaI | CCCAGC | 1 cut(s) | 102 |
| GsuI | CTGGAG | 4 cut(s) | 1373, 2475, 4059, 4256 |
| HaeIII | GGCC | 2 cut(s) | 222, 2045 |
| HapII | CCGG | 4 cut(s) | 34, 173, 2046, 2527 |
| HgaI | GACGC | 3 cut(s) | 2374, 3147, 4317 |
| Hin1I | GRCGYC | 2 cut(s) | 167, 4328 |
| HincII | GTYRAC | 4 cut(s) | 2158, 3136, 4261, 4332 |
| HindII | GTYRAC | 4 cut(s) | 2158, 3136, 4261, 4332 |
| HindIII | AAGCTT | 4 cut(s) | 1411, 1708, 2212, 2632 |
| HpaI | GTTAAC | 1 cut(s) | 2158 |
| HpaII | CCGG | 4 cut(s) | 34, 173, 2046, 2527 |
| Hpy166II | GTNNAC | 8 cut(s) | 690, 843, 1311, 2158, 2524, 3136, 4261, 4332 |
| Hpy8I | GTNNAC | 8 cut(s) | 690, 843, 1311, 2158, 2524, 3136, 4261, 4332 |
| Hpy99I | CGWCG | 4 cut(s) | 169, 1374, 4265, 4333 |
| HpyCH4IV | ACGT | 4 cut(s) | 167, 231, 273, 4458 |
| HpySE526I | ACGT | 4 cut(s) | 167, 231, 273, 4458 |
| Hsp92I | GRCGYC | 2 cut(s) | 167, 4328 |
| Kpn2I | TCCGGA | 1 cut(s) | 33 |
| Ksp22I | TGATCA | 6 cut(s) | 532, 634, 679, 778, 931, 2824 |
| KspAI | GTTAAC | 1 cut(s) | 2158 |
| KspI | CCGCGG | 1 cut(s) | 345 |
| LguI | GCTCTTC | 1 cut(s) | 1393 |
| Lsp1109I | GCAGC | 9 cut(s) | 93, 683, 847, 1065, 1132, 1750, 1827, 1885, 3357 |
| MaeI | CTAG | 5 cut(s) | 200, 366, 3101, 3146, 4386 |
| MaeII | ACGT | 4 cut(s) | 167, 231, 273, 4458 |
| MaeIII | GTNAC | 7 cut(s) | 65, 259, 1253, 1542, 2482, 3328, 3982 |
| MbiI | CCGCTC | 3 cut(s) | 616, 1022, 4148 |
| MfeI | CAATTG | 3 cut(s) | 3057, 3195, 3297 |
| MflI | RGATCY | 3 cut(s) | 1903, 2427, 4489 |
| MhlI | GDGCHC | 3 cut(s) | 1359, 1998, 2555 |
| MlsI | TGGCCA | 1 cut(s) | 222 |
| MluNI | TGGCCA | 1 cut(s) | 222 |
| MlyI | GAGTC | 7 cut(s) | 1019, 1088, 1145, 1196, 1622, 2348, 2396 |
| MmeI | TCCRAC | 5 cut(s) | 993, 1356, 1986, 2874, 3399 |
| Mox20I | TGGCCA | 1 cut(s) | 222 |
| Mph1103I | ATGCAT | 3 cut(s) | 385, 2614, 3874 |
| MroI | TCCGGA | 1 cut(s) | 33 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1412, 3117, 4165 |
| MscI | TGGCCA | 1 cut(s) | 222 |
| MslI | CAYNNNNRTG | 8 cut(s) | 314, 774, 927, 1131, 3543, 3702, 3834, 4137 |
| Msp20I | TGGCCA | 1 cut(s) | 222 |
| MspA1I | CMGCKG | 2 cut(s) | 344, 674 |
| MspI | CCGG | 4 cut(s) | 34, 173, 2046, 2527 |
| MspR9I | CCNGG | 7 cut(s) | 173, 1557, 2105, 2528, 2788, 3029, 3846 |
| MunI | CAATTG | 3 cut(s) | 3057, 3195, 3297 |
| MvaI | CCWGG | 5 cut(s) | 1557, 2105, 2788, 3029, 3846 |
| MvnI | CGCG | 1 cut(s) | 344 |
| NciI | CCSGG | 2 cut(s) | 173, 2528 |
| NcoI | CCATGG | 2 cut(s) | 1126, 2802 |
| NdeI | CATATG | 1 cut(s) | 1519 |
| NlaIV | GGNNCC | 5 cut(s) | 205, 1367, 1722, 2109, 2593 |
| NmeAIII | GCCGAG | 1 cut(s) | 1767 |
| NmuCI | GTSAC | 2 cut(s) | 1253, 3328 |
| NsiI | ATGCAT | 3 cut(s) | 385, 2614, 3874 |
| NspI | RCATGY | 2 cut(s) | 2156, 2612 |
| OliI | CACNNNNGTG | 2 cut(s) | 314, 927 |
| PaeR7I | CTCGAG | 2 cut(s) | 750, 903 |
| PagI | TCATGA | 3 cut(s) | 769, 1132, 4093 |
| PciI | ACATGT | 1 cut(s) | 2152 |
| PciSI | GCTCTTC | 1 cut(s) | 1393 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1412, 3117, 4165 |
| PflFI | GACNNNGTC | 1 cut(s) | 311 |
| PleI | GAGTC | 7 cut(s) | 1018, 1088, 1144, 1195, 1621, 2347, 2396 |
| PpsI | GAGTC | 7 cut(s) | 1018, 1088, 1144, 1195, 1621, 2347, 2396 |
| PscI | ACATGT | 1 cut(s) | 2152 |
| PshBI | ATTAAT | 1 cut(s) | 4317 |
| PsiI | TTATAA | 1 cut(s) | 1245 |
| Psp124BI | GAGCTC | 1 cut(s) | 1359 |
| Psp6I | CCWGG | 5 cut(s) | 1555, 2103, 2786, 3027, 3844 |
| PspEI | GGTNACC | 2 cut(s) | 259, 1542 |
| PspFI | CCCAGC | 1 cut(s) | 98 |
| PspGI | CCWGG | 5 cut(s) | 1555, 2103, 2786, 3027, 3844 |
| PspN4I | GGNNCC | 5 cut(s) | 205, 1367, 1722, 2109, 2593 |
| PspPI | GGNCC | 2 cut(s) | 1311, 1721 |
| PspXI | VCTCGAGB | 2 cut(s) | 750, 903 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 3471, 3503, 3762, 3794 |
| PstI | CTGCAG | 1 cut(s) | 1903 |
| PstNI | CAGNNNCTG | 4 cut(s) | 1007, 3512, 3803, 3953 |
| PsuI | RGATCY | 3 cut(s) | 1903, 2427, 4489 |
| PsyI | GACNNNGTC | 1 cut(s) | 311 |
| PvuII | CAGCTG | 1 cut(s) | 674 |
| RsaI | GTAC | 8 cut(s) | 128, 234, 689, 1785, 2607, 3594, 4231, 4476 |
| RsaNI | GTAC | 8 cut(s) | 127, 233, 688, 1784, 2606, 3593, 4230, 4475 |
| RseI | CAYNNNNRTG | 8 cut(s) | 314, 774, 927, 1131, 3543, 3702, 3834, 4137 |
| SacI | GAGCTC | 1 cut(s) | 1359 |
| SacII | CCGCGG | 1 cut(s) | 345 |
| SalI | GTCGAC | 2 cut(s) | 4259, 4330 |
| SapI | GCTCTTC | 1 cut(s) | 1393 |
| Sau96I | GGNCC | 2 cut(s) | 1311, 1721 |
| ScaI | AGTACT | 1 cut(s) | 4231 |
| SchI | GAGTC | 7 cut(s) | 1019, 1088, 1145, 1196, 1622, 2348, 2396 |
| ScrFI | CCNGG | 7 cut(s) | 173, 1557, 2105, 2528, 2788, 3029, 3846 |
| SduI | GDGCHC | 3 cut(s) | 1359, 1998, 2555 |
| SfcI | CTRYAG | 2 cut(s) | 1899, 3450 |
| Sfr274I | CTCGAG | 2 cut(s) | 750, 903 |
| Sfr303I | CCGCGG | 1 cut(s) | 345 |
| SgrBI | CCGCGG | 1 cut(s) | 345 |
| SinI | GGWCC | 2 cut(s) | 1311, 1721 |
| SlaI | CTCGAG | 2 cut(s) | 750, 903 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 314, 774, 927, 1131, 3543, 3702, 3834, 4137 |
| SmlI | CTYRAG | 3 cut(s) | 320, 750, 903 |
| SmoI | CTYRAG | 3 cut(s) | 320, 750, 903 |
| SpeI | ACTAGT | 1 cut(s) | 4385 |
| SspI | AATATT | 1 cut(s) | 3067 |
| SspMI | CTAG | 5 cut(s) | 200, 366, 3101, 3146, 4386 |
| SstI | GAGCTC | 1 cut(s) | 1359 |
| StyD4I | CCNGG | 7 cut(s) | 171, 1555, 2103, 2526, 2786, 3027, 3844 |
| StyI | CCWWGG | 5 cut(s) | 1126, 1583, 1680, 2301, 2802 |
| TaiI | ACGT | 4 cut(s) | 170, 234, 276, 4461 |
| TaqII | GACCGA | 1 cut(s) | 1328 |
| TatI | WGTACW | 5 cut(s) | 126, 687, 2605, 3592, 4229 |
| TauI | GCSGC | 2 cut(s) | 2323, 3376 |
| TseFI | GTSAC | 2 cut(s) | 1253, 3328 |
| TseI | GCWGC | 9 cut(s) | 106, 671, 835, 1078, 1145, 1738, 1815, 1898, 3370 |
| Tsp45I | GTSAC | 2 cut(s) | 1253, 3328 |
| TspGWI | ACGGA | 9 cut(s) | 1455, 1557, 2013, 2505, 3089, 3758, 3923, 4196, 4502 |
| Tth111I | GACNNNGTC | 1 cut(s) | 311 |
| VpaK11BI | GGWCC | 2 cut(s) | 1311, 1721 |
| VspI | ATTAAT | 1 cut(s) | 4317 |
| XapI | RAATTY | 2 cut(s) | 2996, 3825 |
| XceI | RCATGY | 2 cut(s) | 2156, 2612 |
| XhoI | CTCGAG | 2 cut(s) | 750, 903 |
| XmiI | GTMKAC | 4 cut(s) | 842, 2523, 4260, 4331 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1412, 3117, 4165 |
| XspI | CTAG | 5 cut(s) | 200, 366, 3101, 3146, 4386 |
| ZraI | GACGTC | 1 cut(s) | 168 |
| ZrmI | AGTACT | 1 cut(s) | 4231 |
| Zsp2I | ATGCAT | 3 cut(s) | 385, 2614, 3874 |