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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G17910 AT5G17910 AT5G17910 |
| fragaria_vesca | FvH4_1g29420 FvH4_1g29420 FvH4_1g29420 FvH4_2g10091 FvH4_2g10092 |
| malus_domestica | MD05G1057800.v1.1 MD12G1015000.v1.1 MD14G1012900.v1.1 |
| prunus_persica | Prupe.7G025700_v2.0.a1 Prupe.7G025700_v2.0.a1 Prupe.7G025700_v2.0.a1 Prupe.8G087600_v2.0.a1 Prupe.8G087600_v2.0.a1 Prupe.8G087600_v2.0.a1 |
| pyrus_communis | pycom05g04890 pycom12g01220 pycom14g01090 |
| rosa_chinensis | RchiOBHm_Chr3g0495491 RchiOBHm_Chr6g0267051 |
| rosa_laevigata | RLG00000014046 RLG00000022616 |
| rosa_multiflora | Rmu_co8285861.1_g000001 Rmu_sc0004755.1_g000026 Rmu_sc0005599.1_g000001 Rmu_sc0006163.1_g000016 Rmu_sc0013804.1_g000006 |
| rosa_roxburghii | Rroxscaffold_6G00390490 Rroxscaffold_7G00201200 |
| rosa_rugosa | Rorug03G0273800 Rorug06G0028700 |
| rosa_samantha | Rh3AG321400 Rh3BG356700 Rh3CG353500 Rh3DG356000 Rh6AG150200 Rh6BG151100 Rh6CG146500 Rh6DG135200 |
| rosa_wichuraiana | Rw3G028090 Rw6G013020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 72 |
| AccB1I | GGYRCC | 2 cut(s) | 1382, 2225 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1024 |
| AccI | GTMKAC | 3 cut(s) | 363, 554, 2031 |
| AccII | CGCG | 2 cut(s) | 371, 428 |
| AclWI | GGATC | 7 cut(s) | 820, 2657, 2670, 3045, 3058, 3505, 3520 |
| AcoI | YGGCCR | 1 cut(s) | 223 |
| AcuI | CTGAAG | 4 cut(s) | 810, 1339, 1428, 2343 |
| AcyI | GRCGYC | 1 cut(s) | 366 |
| AdeI | CACNNNGTG | 1 cut(s) | 923 |
| AfaI | GTAC | 5 cut(s) | 912, 1428, 2112, 2159, 2827 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 620, 920, 1024, 1199, 1675, 2984 |
| AhlI | ACTAGT | 1 cut(s) | 2113 |
| AjiI | CACGTC | 1 cut(s) | 1891 |
| AjnI | CCWGG | 7 cut(s) | 278, 286, 849, 1198, 1668, 2423, 2685 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1007, 1039, 1316, 1348, 3639, 3671 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 3042, 3074, 3504, 3536 |
| Alw21I | GWGCWC | 5 cut(s) | 597, 710, 1997, 2639, 2709 |
| Alw26I | GTCTC | 4 cut(s) | 489, 615, 2259, 3403 |
| Alw44I | GTGCAC | 1 cut(s) | 593 |
| AlwI | GGATC | 7 cut(s) | 820, 2657, 2670, 3045, 3058, 3505, 3520 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3515 |
| Ama87I | CYCGRG | 1 cut(s) | 615 |
| AoxI | GGCC | 3 cut(s) | 223, 375, 2835 |
| ApaLI | GTGCAC | 1 cut(s) | 593 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1683, 1715 |
| AscI | GGCGCGCC | 1 cut(s) | 426 |
| AseI | ATTAAT | 1 cut(s) | 438 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1645, 3557 |
| AspLEI | GCGC | 4 cut(s) | 428, 430, 1149, 2242 |
| AspS9I | GGNCC | 3 cut(s) | 376, 847, 1915 |
| AsuC2I | CCSGG | 1 cut(s) | 688 |
| AvaI | CYCGRG | 1 cut(s) | 615 |
| AvaII | GGWCC | 2 cut(s) | 847, 1915 |
| BaeGI | GKGCMC | 1 cut(s) | 597 |
| BalI | TGGCCA | 1 cut(s) | 225 |
| BamHI | GGATCC | 2 cut(s) | 2662, 3050 |
| BanI | GGYRCC | 2 cut(s) | 1382, 2225 |
| BanII | GRGCYC | 2 cut(s) | 710, 2682 |
| BauI | CACGAG | 1 cut(s) | 1391 |
| BbsI | GAAGAC | 1 cut(s) | 1662 |
| Bbv12I | GWGCWC | 5 cut(s) | 597, 710, 1997, 2639, 2709 |
| BceAI | ACGGC | 1 cut(s) | 1089 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1138, 1172 |
| BciT130I | CCWGG | 7 cut(s) | 280, 288, 851, 1200, 1670, 2425, 2687 |
| BciVI | GTATCC | 2 cut(s) | 2545, 2935 |
| BclI | TGATCA | 1 cut(s) | 2461 |
| BcnI | CCSGG | 1 cut(s) | 688 |
| BcoDI | GTCTC | 4 cut(s) | 489, 615, 2259, 3403 |
| BcuI | ACTAGT | 1 cut(s) | 2113 |
| BfaI | CTAG | 6 cut(s) | 182, 2114, 2367, 2787, 2807, 2906 |
| BfmI | CTRYAG | 2 cut(s) | 1539, 3483 |
| BfuI | GTATCC | 2 cut(s) | 2545, 2935 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 374 |
| BlpI | GCTNAGC | 2 cut(s) | 3117, 3267 |
| Bme1390I | CCNGG | 8 cut(s) | 280, 288, 688, 851, 1200, 1670, 2425, 2687 |
| Bme18I | GGWCC | 2 cut(s) | 847, 1915 |
| BmeT110I | CYCGRG | 1 cut(s) | 615 |
| BmgBI | CACGTC | 1 cut(s) | 1891 |
| BmgT120I | GGNCC | 3 cut(s) | 376, 847, 1915 |
| BmrFI | CCNGG | 8 cut(s) | 280, 288, 688, 851, 1200, 1670, 2425, 2687 |
| BpiI | GAAGAC | 1 cut(s) | 1662 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 326, 358 |
| BpmI | CTGGAG | 1 cut(s) | 2964 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 3117, 3267 |
| BpuEI | CTTGAG | 6 cut(s) | 329, 1265, 1988, 2109, 2723, 3621 |
| BpuMI | CCSGG | 1 cut(s) | 688 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2010 |
| BsaHI | GRCGYC | 1 cut(s) | 366 |
| BsaJI | CCNNGG | 9 cut(s) | 279, 369, 616, 850, 1198, 1636, 1668, 2330, 2439 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 2751, 2765, 2781, 2795, 3217, 3247 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 620, 920, 1024, 1199, 1675, 2984 |
| Bse118I | RCCGGY | 2 cut(s) | 389, 913 |
| Bse1I | ACTGG | 3 cut(s) | 2027, 2838, 3054 |
| Bse3DI | GCAATG | 2 cut(s) | 3202, 3352 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2010 |
| BseBI | CCWGG | 7 cut(s) | 280, 288, 851, 1200, 1670, 2425, 2687 |
| BseDI | CCNNGG | 9 cut(s) | 279, 369, 616, 850, 1198, 1636, 1668, 2330, 2439 |
| BseJI | GATNNNNATC | 1 cut(s) | 2010 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 620, 920, 1024, 1199, 1675, 2984 |
| BseMI | GCAATG | 2 cut(s) | 3202, 3352 |
| BseMII | CTCAG | 9 cut(s) | 473, 693, 789, 1068, 2726, 3108, 3159, 3258, 3309 |
| BseNI | ACTGG | 3 cut(s) | 2027, 2838, 3054 |
| BsePI | GCGCGC | 1 cut(s) | 426 |
| BseRI | GAGGAG | 8 cut(s) | 633, 636, 1453, 1841, 1985, 2786, 3038, 3041 |
| BseSI | GKGCMC | 1 cut(s) | 597 |
| BseYI | CCCAGC | 1 cut(s) | 2289 |
| BsgI | GTGCAG | 5 cut(s) | 113, 172, 470, 743, 2852 |
| Bsh1236I | CGCG | 2 cut(s) | 371, 428 |
| BshFI | GGCC | 3 cut(s) | 225, 377, 2837 |
| BshNI | GGYRCC | 2 cut(s) | 1382, 2225 |
| BsiHKAI | GWGCWC | 5 cut(s) | 597, 710, 1997, 2639, 2709 |
| BsiHKCI | CYCGRG | 1 cut(s) | 615 |
| BsiSI | CCGG | 3 cut(s) | 390, 687, 914 |
| BslFI | GGGAC | 1 cut(s) | 2749 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 620, 920, 1024, 1199, 1675, 2984 |
| BsmAI | GTCTC | 4 cut(s) | 489, 615, 2259, 3403 |
| BsmFI | GGGAC | 1 cut(s) | 2749 |
| BsmI | GAATGC | 2 cut(s) | 1331, 2353 |
| BsnI | GGCC | 3 cut(s) | 225, 377, 2837 |
| BsoBI | CYCGRG | 1 cut(s) | 615 |
| Bsp1286I | GDGCHC | 6 cut(s) | 597, 710, 1997, 2639, 2682, 2709 |
| Bsp1407I | TGTACA | 1 cut(s) | 2157 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 3117, 3267 |
| Bsp19I | CCATGG | 2 cut(s) | 1636, 2439 |
| BspANI | GGCC | 3 cut(s) | 225, 377, 2837 |
| BspCNI | CTCAG | 9 cut(s) | 472, 694, 788, 1069, 2725, 3109, 3160, 3259, 3310 |
| BspFNI | CGCG | 2 cut(s) | 371, 428 |
| BspHI | TCATGA | 3 cut(s) | 658, 1989, 2752 |
| BspPI | GGATC | 7 cut(s) | 820, 2657, 2670, 3045, 3058, 3505, 3520 |
| BspT107I | GGYRCC | 2 cut(s) | 1382, 2225 |
| BsrDI | GCAATG | 2 cut(s) | 3202, 3352 |
| BsrFI | RCCGGY | 2 cut(s) | 389, 913 |
| BsrGI | TGTACA | 1 cut(s) | 2157 |
| BsrI | ACTGG | 3 cut(s) | 2027, 2838, 3054 |
| BssAI | RCCGGY | 2 cut(s) | 389, 913 |
| BssECI | CCNNGG | 9 cut(s) | 279, 369, 616, 850, 1198, 1636, 1668, 2330, 2439 |
| BssHII | GCGCGC | 1 cut(s) | 426 |
| BssNAI | GTATAC | 1 cut(s) | 555 |
| BssNI | GRCGYC | 1 cut(s) | 366 |
| BssSI | CACGAG | 1 cut(s) | 1391 |
| BssT1I | CCWWGG | 3 cut(s) | 1636, 2330, 2439 |
| Bst1107I | GTATAC | 1 cut(s) | 555 |
| Bst2BI | CACGAG | 1 cut(s) | 1391 |
| Bst2UI | CCWGG | 7 cut(s) | 280, 288, 851, 1200, 1670, 2425, 2687 |
| Bst6I | CTCTTC | 3 cut(s) | 1818, 2208, 2496 |
| BstACI | GRCGYC | 1 cut(s) | 366 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1319 |
| BstAUI | TGTACA | 1 cut(s) | 2157 |
| BstC8I | GCNNGC | 8 cut(s) | 349, 391, 428, 521, 792, 1320, 2097, 2835 |
| BstDSI | CCRYGG | 3 cut(s) | 369, 1636, 2439 |
| BstEII | GGTNACC | 1 cut(s) | 1286 |
| BstFNI | CGCG | 2 cut(s) | 371, 428 |
| BstHHI | GCGC | 4 cut(s) | 428, 430, 1149, 2242 |
| BstMAI | GTCTC | 4 cut(s) | 489, 615, 2259, 3403 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 374, 728, 763, 1319, 1328, 1396, 2246 |
| BstNI | CCWGG | 7 cut(s) | 280, 288, 851, 1200, 1670, 2425, 2687 |
| BstNSI | RCATGY | 3 cut(s) | 69, 1192, 1322 |
| BstPI | GGTNACC | 1 cut(s) | 1286 |
| BstSCI | CCNGG | 8 cut(s) | 278, 286, 686, 849, 1198, 1668, 2423, 2685 |
| BstSFI | CTRYAG | 2 cut(s) | 1539, 3483 |
| BstSLI | GKGCMC | 1 cut(s) | 597 |
| BstUI | CGCG | 2 cut(s) | 371, 428 |
| BstV2I | GAAGAC | 1 cut(s) | 1662 |
| BstX2I | RGATCY | 4 cut(s) | 812, 2662, 3050, 3512 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1222 |
| BstYI | RGATCY | 4 cut(s) | 812, 2662, 3050, 3512 |
| BstZ17I | GTATAC | 1 cut(s) | 555 |
| BsuI | GTATCC | 2 cut(s) | 2545, 2935 |
| BsuRI | GGCC | 3 cut(s) | 225, 377, 2837 |
| BtgI | CCRYGG | 3 cut(s) | 369, 1636, 2439 |
| BtgZI | GCGATG | 2 cut(s) | 306, 1299 |
| BtrI | CACGTC | 1 cut(s) | 1891 |
| BtsI | GCAGTG | 1 cut(s) | 189 |
| Cac8I | GCNNGC | 8 cut(s) | 349, 391, 428, 521, 792, 1320, 2097, 2835 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3515 |
| CciI | TCATGA | 3 cut(s) | 658, 1989, 2752 |
| CfoI | GCGC | 4 cut(s) | 428, 430, 1149, 2242 |
| Cfr10I | RCCGGY | 2 cut(s) | 389, 913 |
| Cfr13I | GGNCC | 3 cut(s) | 376, 847, 1915 |
| Cfr42I | CCGCGG | 1 cut(s) | 372 |
| CseI | GACGC | 2 cut(s) | 374, 2060 |
| Csp6I | GTAC | 5 cut(s) | 911, 1427, 2111, 2158, 2826 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 513, 548, 2919, 2954 |
| CviQI | GTAC | 5 cut(s) | 911, 1427, 2111, 2158, 2826 |
| DraI | TTTAAA | 1 cut(s) | 3240 |
| DraIII | CACNNNGTG | 1 cut(s) | 923 |
| EaeI | YGGCCR | 1 cut(s) | 223 |
| Eam1104I | CTCTTC | 3 cut(s) | 1818, 2208, 2496 |
| EarI | CTCTTC | 3 cut(s) | 1818, 2208, 2496 |
| EciI | GGCGGA | 2 cut(s) | 909, 2675 |
| Ecl136II | GAGCTC | 1 cut(s) | 708 |
| Eco130I | CCWWGG | 3 cut(s) | 1636, 2330, 2439 |
| Eco24I | GRGCYC | 2 cut(s) | 710, 2682 |
| Eco32I | GATATC | 2 cut(s) | 54, 2106 |
| Eco47I | GGWCC | 2 cut(s) | 847, 1915 |
| Eco53kI | GAGCTC | 1 cut(s) | 708 |
| Eco57I | CTGAAG | 4 cut(s) | 810, 1339, 1428, 2343 |
| Eco88I | CYCGRG | 1 cut(s) | 615 |
| Eco91I | GGTNACC | 1 cut(s) | 1286 |
| EcoICRI | GAGCTC | 1 cut(s) | 708 |
| EcoO65I | GGTNACC | 1 cut(s) | 1286 |
| EcoRII | CCWGG | 7 cut(s) | 278, 286, 849, 1198, 1668, 2423, 2685 |
| EcoRV | GATATC | 2 cut(s) | 54, 2106 |
| EcoT14I | CCWWGG | 3 cut(s) | 1636, 2330, 2439 |
| EcoT22I | ATGCAT | 2 cut(s) | 1333, 1621 |
| EcoT38I | GRGCYC | 2 cut(s) | 710, 2682 |
| ErhI | CCWWGG | 3 cut(s) | 1636, 2330, 2439 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1426, 1458 |
| FaqI | GGGAC | 1 cut(s) | 2749 |
| FauI | CCCGC | 1 cut(s) | 771 |
| FbaI | TGATCA | 1 cut(s) | 2461 |
| FblI | GTMKAC | 3 cut(s) | 363, 554, 2031 |
| FriOI | GRGCYC | 2 cut(s) | 710, 2682 |
| FspBI | CTAG | 6 cut(s) | 182, 2114, 2367, 2787, 2807, 2906 |
| GlaI | GCGC | 4 cut(s) | 427, 429, 1148, 2241 |
| GsaI | CCCAGC | 1 cut(s) | 2293 |
| GsuI | CTGGAG | 1 cut(s) | 2964 |
| HaeIII | GGCC | 3 cut(s) | 225, 377, 2837 |
| HapII | CCGG | 3 cut(s) | 390, 687, 914 |
| HgaI | GACGC | 2 cut(s) | 374, 2060 |
| HhaI | GCGC | 4 cut(s) | 428, 430, 1149, 2242 |
| Hin1I | GRCGYC | 1 cut(s) | 366 |
| Hin6I | GCGC | 4 cut(s) | 426, 428, 1147, 2240 |
| HinP1I | GCGC | 4 cut(s) | 426, 428, 1147, 2240 |
| HincII | GTYRAC | 4 cut(s) | 168, 364, 1633, 2797 |
| HindII | GTYRAC | 4 cut(s) | 168, 364, 1633, 2797 |
| HindIII | AAGCTT | 5 cut(s) | 1060, 1351, 1372, 1753, 1849 |
| HpaII | CCGG | 3 cut(s) | 390, 687, 914 |
| Hpy99I | CGWCG | 2 cut(s) | 368, 715 |
| HpyAV | CCTTC | 7 cut(s) | 749, 1041, 1442, 1891, 2188, 3098, 3248 |
| HpyCH4IV | ACGT | 4 cut(s) | 1659, 1890, 3147, 3297 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 374, 728, 763, 1319, 1328, 1396, 2246 |
| HpySE526I | ACGT | 4 cut(s) | 1659, 1890, 3147, 3297 |
| Hsp92I | GRCGYC | 1 cut(s) | 366 |
| HspAI | GCGC | 4 cut(s) | 426, 428, 1147, 2240 |
| KroI | GCCGGC | 1 cut(s) | 389 |
| KroNI | GCCGGC | 1 cut(s) | 391 |
| Ksp22I | TGATCA | 1 cut(s) | 2461 |
| KspI | CCGCGG | 1 cut(s) | 372 |
| LmnI | GCTCC | 6 cut(s) | 787, 1003, 1213, 1364, 2023, 2689 |
| MaeI | CTAG | 6 cut(s) | 182, 2114, 2367, 2787, 2807, 2906 |
| MaeII | ACGT | 4 cut(s) | 1659, 1890, 3147, 3297 |
| MaeIII | GTNAC | 6 cut(s) | 464, 1286, 1457, 1786, 2369, 3223 |
| MfeI | CAATTG | 1 cut(s) | 2256 |
| MflI | RGATCY | 4 cut(s) | 812, 2662, 3050, 3512 |
| MhlI | GDGCHC | 6 cut(s) | 597, 710, 1997, 2639, 2682, 2709 |
| MlsI | TGGCCA | 1 cut(s) | 225 |
| MluNI | TGGCCA | 1 cut(s) | 225 |
| MmeI | TCCRAC | 8 cut(s) | 255, 486, 672, 825, 1629, 1740, 2409, 2539 |
| Mox20I | TGGCCA | 1 cut(s) | 225 |
| Mph1103I | ATGCAT | 2 cut(s) | 1333, 1621 |
| MroNI | GCCGGC | 1 cut(s) | 389 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1645, 3557 |
| MscI | TGGCCA | 1 cut(s) | 225 |
| MseI | TTAA | 9 cut(s) | 215, 438, 954, 1070, 1119, 1407, 2019, 2919, 3239 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1323, 1650 |
| Msp20I | TGGCCA | 1 cut(s) | 225 |
| MspA1I | CMGCKG | 4 cut(s) | 371, 454, 550, 2003 |
| MspI | CCGG | 3 cut(s) | 390, 687, 914 |
| MspR9I | CCNGG | 8 cut(s) | 280, 288, 688, 851, 1200, 1670, 2425, 2687 |
| MunI | CAATTG | 1 cut(s) | 2256 |
| Mva1269I | GAATGC | 2 cut(s) | 1331, 2353 |
| MvaI | CCWGG | 7 cut(s) | 280, 288, 851, 1200, 1670, 2425, 2687 |
| MvnI | CGCG | 2 cut(s) | 371, 428 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 374, 728, 763, 1319, 1328, 1396, 2246 |
| NaeI | GCCGGC | 1 cut(s) | 391 |
| NciI | CCSGG | 1 cut(s) | 688 |
| NcoI | CCATGG | 2 cut(s) | 1636, 2439 |
| NgoMIV | GCCGGC | 1 cut(s) | 389 |
| NmuCI | GTSAC | 3 cut(s) | 464, 1286, 3223 |
| NsiI | ATGCAT | 2 cut(s) | 1333, 1621 |
| NspI | RCATGY | 3 cut(s) | 69, 1192, 1322 |
| PaeI | GCATGC | 1 cut(s) | 1322 |
| PagI | TCATGA | 3 cut(s) | 658, 1989, 2752 |
| PalAI | GGCGCGCC | 1 cut(s) | 426 |
| PauI | GCGCGC | 1 cut(s) | 426 |
| PctI | GAATGC | 2 cut(s) | 1331, 2353 |
| PdiI | GCCGGC | 1 cut(s) | 391 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1645, 3557 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1024 |
| PfoI | TCCNGGA | 1 cut(s) | 2685 |
| PshBI | ATTAAT | 1 cut(s) | 438 |
| PsiI | TTATAA | 1 cut(s) | 72 |
| Psp124BI | GAGCTC | 1 cut(s) | 710 |
| Psp6I | CCWGG | 7 cut(s) | 278, 286, 849, 1198, 1668, 2423, 2685 |
| PspEI | GGTNACC | 1 cut(s) | 1286 |
| PspFI | CCCAGC | 1 cut(s) | 2289 |
| PspGI | CCWGG | 7 cut(s) | 278, 286, 849, 1198, 1668, 2423, 2685 |
| PspPI | GGNCC | 3 cut(s) | 376, 847, 1915 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3515 |
| PsuI | RGATCY | 4 cut(s) | 812, 2662, 3050, 3512 |
| PteI | GCGCGC | 1 cut(s) | 426 |
| PvuII | CAGCTG | 1 cut(s) | 2003 |
| RsaI | GTAC | 5 cut(s) | 912, 1428, 2112, 2159, 2827 |
| RsaNI | GTAC | 5 cut(s) | 911, 1427, 2111, 2158, 2826 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1323, 1650 |
| SacI | GAGCTC | 1 cut(s) | 710 |
| SacII | CCGCGG | 1 cut(s) | 372 |
| SalI | GTCGAC | 1 cut(s) | 362 |
| SaqAI | TTAA | 9 cut(s) | 215, 438, 954, 1070, 1119, 1407, 2019, 2919, 3239 |
| Sau96I | GGNCC | 3 cut(s) | 376, 847, 1915 |
| ScrFI | CCNGG | 8 cut(s) | 280, 288, 688, 851, 1200, 1670, 2425, 2687 |
| SduI | GDGCHC | 6 cut(s) | 597, 710, 1997, 2639, 2682, 2709 |
| SfcI | CTRYAG | 2 cut(s) | 1539, 3483 |
| Sfr303I | CCGCGG | 1 cut(s) | 372 |
| SgrBI | CCGCGG | 1 cut(s) | 372 |
| SgsI | GGCGCGCC | 1 cut(s) | 426 |
| SinI | GGWCC | 2 cut(s) | 847, 1915 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1323, 1650 |
| SmlI | CTYRAG | 6 cut(s) | 308, 1280, 1967, 2124, 2702, 3636 |
| SmoI | CTYRAG | 6 cut(s) | 308, 1280, 1967, 2124, 2702, 3636 |
| SpeI | ACTAGT | 1 cut(s) | 2113 |
| SphI | GCATGC | 1 cut(s) | 1322 |
| SspMI | CTAG | 6 cut(s) | 182, 2114, 2367, 2787, 2807, 2906 |
| SstI | GAGCTC | 1 cut(s) | 710 |
| StyD4I | CCNGG | 8 cut(s) | 278, 286, 686, 849, 1198, 1668, 2423, 2685 |
| StyI | CCWWGG | 3 cut(s) | 1636, 2330, 2439 |
| TaiI | ACGT | 4 cut(s) | 1662, 1893, 3150, 3300 |
| TaqI | TCGA | 6 cut(s) | 363, 395, 574, 1158, 1296, 3500 |
| TatI | WGTACW | 3 cut(s) | 2110, 2157, 2825 |
| TauI | GCSGC | 3 cut(s) | 371, 2660, 3274 |
| Tru1I | TTAA | 9 cut(s) | 215, 438, 954, 1070, 1119, 1407, 2019, 2919, 3239 |
| Tru9I | TTAA | 9 cut(s) | 215, 438, 954, 1070, 1119, 1407, 2019, 2919, 3239 |
| TseFI | GTSAC | 3 cut(s) | 464, 1286, 3223 |
| Tsp45I | GTSAC | 3 cut(s) | 464, 1286, 3223 |
| TspGWI | ACGGA | 3 cut(s) | 1328, 1607, 3404 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1024 |
| VneI | GTGCAC | 1 cut(s) | 593 |
| VpaK11BI | GGWCC | 2 cut(s) | 847, 1915 |
| VspI | ATTAAT | 1 cut(s) | 438 |
| XbaI | TCTAGA | 1 cut(s) | 2905 |
| XceI | RCATGY | 3 cut(s) | 69, 1192, 1322 |
| XmiI | GTMKAC | 3 cut(s) | 363, 554, 2031 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1645, 3557 |
| XspI | CTAG | 6 cut(s) | 182, 2114, 2367, 2787, 2807, 2906 |
| Zsp2I | ATGCAT | 2 cut(s) | 1333, 1621 |