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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G17910 AT5G17910 AT5G17910 |
| fragaria_vesca | FvH4_1g29420 FvH4_1g29420 FvH4_1g29420 FvH4_2g10091 FvH4_2g10092 |
| malus_domestica | MD05G1057800.v1.1 MD12G1015000.v1.1 MD14G1012900.v1.1 |
| prunus_persica | Prupe.7G025700_v2.0.a1 Prupe.7G025700_v2.0.a1 Prupe.7G025700_v2.0.a1 Prupe.8G087600_v2.0.a1 Prupe.8G087600_v2.0.a1 Prupe.8G087600_v2.0.a1 |
| pyrus_communis | pycom05g04890 pycom12g01220 pycom14g01090 |
| rosa_chinensis | RchiOBHm_Chr3g0495491 RchiOBHm_Chr6g0267051 |
| rosa_laevigata | RLG00000014046 RLG00000022616 |
| rosa_multiflora | Rmu_co8285861.1_g000001 Rmu_sc0004755.1_g000026 Rmu_sc0005599.1_g000001 Rmu_sc0006163.1_g000016 Rmu_sc0013804.1_g000006 |
| rosa_roxburghii | Rroxscaffold_6G00390490 Rroxscaffold_7G00201200 |
| rosa_rugosa | Rorug03G0273800 Rorug06G0028700 |
| rosa_samantha | Rh3AG321400 Rh3BG356700 Rh3CG353500 Rh3DG356000 Rh6AG150200 Rh6BG151100 Rh6CG146500 Rh6DG135200 |
| rosa_wichuraiana | Rw3G028090 Rw6G013020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 993 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 746, 2690 |
| AccB1I | GGYRCC | 1 cut(s) | 203 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1123 |
| AccI | GTMKAC | 3 cut(s) | 164, 629, 2265 |
| AccIII | TCCGGA | 2 cut(s) | 541, 1849 |
| AciI | CCGC | 6 cut(s) | 785, 848, 2114, 2576, 2918, 3642 |
| AclWI | GGATC | 8 cut(s) | 392, 399, 444, 1847, 1860, 2023, 2170, 3069 |
| AcoI | YGGCCR | 1 cut(s) | 220 |
| AcuI | CTGAAG | 7 cut(s) | 747, 1444, 1533, 2295, 2298, 2671, 2835 |
| AdeI | CACNNNGTG | 2 cut(s) | 1022, 3818 |
| AfaI | GTAC | 7 cut(s) | 128, 969, 1533, 1870, 2308, 2349, 3418 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1123, 1304, 1305 |
| AflIII | ACRYGT | 2 cut(s) | 62, 882 |
| AhlI | ACTAGT | 1 cut(s) | 2806 |
| AjnI | CCWGG | 6 cut(s) | 1303, 2268, 2284, 2531, 2796, 3724 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 1106, 1138, 1421, 1453, 3304, 3336, 3631, 3663 |
| AleI | CACNNNNGTG | 1 cut(s) | 1889 |
| Alw21I | GWGCWC | 2 cut(s) | 2297, 3403 |
| Alw26I | GTCTC | 8 cut(s) | 555, 1386, 1513, 3118, 3283, 3445, 3610, 3775 |
| AlwI | GGATC | 8 cut(s) | 392, 399, 444, 1847, 1860, 2023, 2170, 3069 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 770, 875, 3725 |
| Ama87I | CYCGRG | 1 cut(s) | 236 |
| Aor13HI | TCCGGA | 2 cut(s) | 541, 1849 |
| AoxI | GGCC | 1 cut(s) | 220 |
| ApeKI | GCWGC | 8 cut(s) | 106, 330, 622, 1646, 2927, 3139, 3301, 3793 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2925, 2957, 3152, 3184 |
| AseI | ATTAAT | 1 cut(s) | 3348 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1160, 2886, 3090 |
| AspLEI | GCGC | 1 cut(s) | 2284 |
| AspS9I | GGNCC | 3 cut(s) | 1469, 3836, 3850 |
| AsuHPI | GGTGA | 7 cut(s) | 737, 789, 1013, 2051, 2300, 2720, 3146 |
| AsuNHI | GCTAGC | 1 cut(s) | 2914 |
| AvaI | CYCGRG | 1 cut(s) | 236 |
| AvaII | GGWCC | 3 cut(s) | 1469, 3836, 3850 |
| AxyI | CCTNAGG | 1 cut(s) | 2238 |
| BaeGI | GKGCMC | 1 cut(s) | 206 |
| BalI | TGGCCA | 1 cut(s) | 222 |
| BamHI | GGATCC | 1 cut(s) | 1852 |
| BanI | GGYRCC | 1 cut(s) | 203 |
| BanII | GRGCYC | 1 cut(s) | 2733 |
| BbsI | GAAGAC | 1 cut(s) | 2462 |
| Bbv12I | GWGCWC | 2 cut(s) | 2297, 3403 |
| BbvI | GCAGC | 8 cut(s) | 93, 342, 634, 1658, 2939, 3126, 3288, 3780 |
| BceAI | ACGGC | 1 cut(s) | 1188 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2736, 2770 |
| BciT130I | CCWGG | 6 cut(s) | 1305, 2270, 2286, 2533, 2798, 3726 |
| BclI | TGATCA | 2 cut(s) | 685, 2569 |
| BcoDI | GTCTC | 8 cut(s) | 555, 1386, 1513, 3118, 3283, 3445, 3610, 3775 |
| BcuI | ACTAGT | 1 cut(s) | 2806 |
| BfaI | CTAG | 6 cut(s) | 2475, 2645, 2669, 2807, 2915, 3404 |
| BfmI | CTRYAG | 3 cut(s) | 1644, 3189, 3717 |
| BfoI | RGCGCY | 1 cut(s) | 2285 |
| BglII | AGATCT | 3 cut(s) | 1651, 2427, 2978 |
| BisI | GCNGC | 8 cut(s) | 107, 331, 623, 1647, 2928, 3140, 3302, 3794 |
| BlsI | GCNGC | 8 cut(s) | 108, 332, 624, 1648, 2929, 3141, 3303, 3795 |
| BmcAI | AGTACT | 1 cut(s) | 3418 |
| Bme1390I | CCNGG | 6 cut(s) | 1305, 2270, 2286, 2533, 2798, 3726 |
| Bme18I | GGWCC | 3 cut(s) | 1469, 3836, 3850 |
| BmeT110I | CYCGRG | 1 cut(s) | 236 |
| BmgT120I | GGNCC | 3 cut(s) | 1469, 3836, 3850 |
| BmiI | GGNNCC | 6 cut(s) | 205, 448, 1115, 1470, 1854, 2335 |
| BmrFI | CCNGG | 6 cut(s) | 1305, 2270, 2286, 2533, 2798, 3726 |
| BmrI | ACTGGG | 2 cut(s) | 297, 2889 |
| BmtI | GCTAGC | 1 cut(s) | 2918 |
| BmuI | ACTGGG | 2 cut(s) | 297, 2889 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2154 |
| BpiI | GAAGAC | 1 cut(s) | 2462 |
| BplI | GAGNNNNNCTC | 8 cut(s) | 335, 367, 550, 582, 779, 811, 3263, 3295 |
| BpmI | CTGGAG | 2 cut(s) | 852, 2819 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1480 |
| BpuEI | CTTGAG | 2 cut(s) | 1370, 2137 |
| Bsa29I | ATCGAT | 1 cut(s) | 2825 |
| BsaBI | GATNNNNATC | 1 cut(s) | 396 |
| BsaI | GGTCTC | 3 cut(s) | 555, 1386, 1513 |
| BsaJI | CCNNGG | 5 cut(s) | 955, 1304, 1428, 2547, 3696 |
| BsaWI | WCCGGW | 2 cut(s) | 541, 1849 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3362, 3392 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1123, 1304, 1305 |
| Bse1I | ACTGG | 6 cut(s) | 292, 1931, 1950, 2141, 2895, 2949 |
| Bse21I | CCTNAGG | 1 cut(s) | 2238 |
| Bse3DI | GCAATG | 4 cut(s) | 922, 3360, 3525, 3687 |
| Bse8I | GATNNNNATC | 1 cut(s) | 396 |
| BseAI | TCCGGA | 2 cut(s) | 541, 1849 |
| BseBI | CCWGG | 6 cut(s) | 1305, 2270, 2286, 2533, 2798, 3726 |
| BseCI | ATCGAT | 1 cut(s) | 2825 |
| BseDI | CCNNGG | 5 cut(s) | 955, 1304, 1428, 2547, 3696 |
| BseJI | GATNNNNATC | 1 cut(s) | 396 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1123, 1304, 1305 |
| BseMI | GCAATG | 4 cut(s) | 922, 3360, 3525, 3687 |
| BseNI | ACTGG | 6 cut(s) | 292, 1931, 1950, 2141, 2895, 2949 |
| BseRI | GAGGAG | 4 cut(s) | 978, 2099, 3221, 3383 |
| BseSI | GKGCMC | 1 cut(s) | 206 |
| BseXI | GCAGC | 8 cut(s) | 93, 342, 634, 1658, 2939, 3126, 3288, 3780 |
| BseYI | CCCAGC | 1 cut(s) | 1790 |
| BsgI | GTGCAG | 1 cut(s) | 169 |
| BshFI | GGCC | 1 cut(s) | 222 |
| BshNI | GGYRCC | 1 cut(s) | 203 |
| BshVI | ATCGAT | 1 cut(s) | 2825 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2297, 3403 |
| BsiHKCI | CYCGRG | 1 cut(s) | 236 |
| BsiSI | CCGG | 2 cut(s) | 542, 1850 |
| BslFI | GGGAC | 5 cut(s) | 871, 1482, 2142, 2696, 2880 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1123, 1304, 1305 |
| BsmAI | GTCTC | 8 cut(s) | 555, 1386, 1513, 3118, 3283, 3445, 3610, 3775 |
| BsmFI | GGGAC | 5 cut(s) | 871, 1482, 2142, 2696, 2880 |
| BsmI | GAATGC | 1 cut(s) | 1436 |
| BsnI | GGCC | 1 cut(s) | 222 |
| Bso31I | GGTCTC | 3 cut(s) | 555, 1386, 1513 |
| BsoBI | CYCGRG | 1 cut(s) | 236 |
| Bsp1286I | GDGCHC | 4 cut(s) | 206, 2297, 2733, 3403 |
| Bsp13I | TCCGGA | 2 cut(s) | 541, 1849 |
| Bsp1407I | TGTACA | 1 cut(s) | 126 |
| Bsp19I | CCATGG | 1 cut(s) | 2547 |
| BspACI | CCGC | 6 cut(s) | 785, 848, 2114, 2576, 2918, 3642 |
| BspANI | GGCC | 1 cut(s) | 222 |
| BspDI | ATCGAT | 1 cut(s) | 2825 |
| BspEI | TCCGGA | 2 cut(s) | 541, 1849 |
| BspHI | TCATGA | 3 cut(s) | 394, 439, 568 |
| BspLI | GGNNCC | 6 cut(s) | 205, 448, 1115, 1470, 1854, 2335 |
| BspMAI | CTGCAG | 2 cut(s) | 1648, 3193 |
| BspOI | GCTAGC | 1 cut(s) | 2918 |
| BspPI | GGATC | 8 cut(s) | 392, 399, 444, 1847, 1860, 2023, 2170, 3069 |
| BspQI | GCTCTTC | 1 cut(s) | 1141 |
| BspT107I | GGYRCC | 1 cut(s) | 203 |
| BspTNI | GGTCTC | 3 cut(s) | 555, 1386, 1513 |
| BsrDI | GCAATG | 4 cut(s) | 922, 3360, 3525, 3687 |
| BsrGI | TGTACA | 1 cut(s) | 126 |
| BsrI | ACTGG | 6 cut(s) | 292, 1931, 1950, 2141, 2895, 2949 |
| BssECI | CCNNGG | 5 cut(s) | 955, 1304, 1428, 2547, 3696 |
| BssNAI | GTATAC | 1 cut(s) | 630 |
| BssT1I | CCWWGG | 3 cut(s) | 1428, 2547, 3696 |
| Bst1107I | GTATAC | 1 cut(s) | 630 |
| Bst2UI | CCWGG | 6 cut(s) | 1305, 2270, 2286, 2533, 2798, 3726 |
| Bst4CI | ACNGT | 5 cut(s) | 646, 1001, 1542, 2941, 3081 |
| Bst6I | CTCTTC | 7 cut(s) | 246, 497, 1141, 1623, 1932, 2203, 2418 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3263 |
| BstAUI | TGTACA | 1 cut(s) | 126 |
| BstC8I | GCNNGC | 6 cut(s) | 104, 876, 922, 1821, 2211, 2916 |
| BstDSI | CCRYGG | 1 cut(s) | 2547 |
| BstEII | GGTNACC | 1 cut(s) | 1290 |
| BstH2I | RGCGCY | 1 cut(s) | 2285 |
| BstHHI | GCGC | 1 cut(s) | 2284 |
| BstMAI | GTCTC | 8 cut(s) | 555, 1386, 1513, 3118, 3283, 3445, 3610, 3775 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 812, 847, 921, 1501, 2924, 3043, 3263 |
| BstNI | CCWGG | 6 cut(s) | 1305, 2270, 2286, 2533, 2798, 3726 |
| BstNSI | RCATGY | 6 cut(s) | 66, 886, 2354, 2388, 2409, 3261 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2154 |
| BstPI | GGTNACC | 1 cut(s) | 1290 |
| BstSCI | CCNGG | 6 cut(s) | 1303, 2268, 2284, 2531, 2796, 3724 |
| BstSFI | CTRYAG | 3 cut(s) | 1644, 3189, 3717 |
| BstSLI | GKGCMC | 1 cut(s) | 206 |
| BstV1I | GCAGC | 8 cut(s) | 93, 342, 634, 1658, 2939, 3126, 3288, 3780 |
| BstV2I | GAAGAC | 1 cut(s) | 2462 |
| BstX2I | RGATCY | 5 cut(s) | 1651, 1852, 2175, 2427, 2978 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1891 |
| BstYI | RGATCY | 5 cut(s) | 1651, 1852, 2175, 2427, 2978 |
| BstZ17I | GTATAC | 1 cut(s) | 630 |
| Bsu15I | ATCGAT | 1 cut(s) | 2825 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2238 |
| BsuRI | GGCC | 1 cut(s) | 222 |
| BsuTUI | ATCGAT | 1 cut(s) | 2825 |
| BtgI | CCRYGG | 1 cut(s) | 2547 |
| BtsI | GCAGTG | 7 cut(s) | 186, 724, 931, 2066, 2714, 3198, 3252 |
| BtsIMutI | CAGTG | 9 cut(s) | 186, 724, 931, 1678, 2066, 2695, 2714, 3198, 3252 |
| Cac8I | GCNNGC | 6 cut(s) | 104, 876, 922, 1821, 2211, 2916 |
| CaiI | CAGNNNCTG | 3 cut(s) | 770, 875, 3725 |
| CciI | TCATGA | 3 cut(s) | 394, 439, 568 |
| CfoI | GCGC | 1 cut(s) | 2284 |
| Cfr13I | GGNCC | 3 cut(s) | 1469, 3836, 3850 |
| ClaI | ATCGAT | 1 cut(s) | 2825 |
| CseI | GACGC | 1 cut(s) | 3366 |
| CsiI | ACCWGGT | 1 cut(s) | 3724 |
| Csp6I | GTAC | 7 cut(s) | 127, 968, 1532, 1869, 2307, 2348, 3417 |
| CviQI | GTAC | 7 cut(s) | 127, 968, 1532, 1869, 2307, 2348, 3417 |
| DraI | TTTAAA | 3 cut(s) | 2448, 3006, 3486 |
| DraIII | CACNNNGTG | 2 cut(s) | 1022, 3818 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 746, 2690 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 746, 2690 |
| EaeI | YGGCCR | 1 cut(s) | 220 |
| Eam1104I | CTCTTC | 7 cut(s) | 246, 497, 1141, 1623, 1932, 2203, 2418 |
| EarI | CTCTTC | 7 cut(s) | 246, 497, 1141, 1623, 1932, 2203, 2418 |
| EciI | GGCGGA | 1 cut(s) | 800 |
| Eco130I | CCWWGG | 3 cut(s) | 1428, 2547, 3696 |
| Eco24I | GRGCYC | 1 cut(s) | 2733 |
| Eco31I | GGTCTC | 3 cut(s) | 555, 1386, 1513 |
| Eco32I | GATATC | 2 cut(s) | 1707, 2044 |
| Eco47I | GGWCC | 3 cut(s) | 1469, 3836, 3850 |
| Eco57I | CTGAAG | 7 cut(s) | 747, 1444, 1533, 2295, 2298, 2671, 2835 |
| Eco81I | CCTNAGG | 1 cut(s) | 2238 |
| Eco88I | CYCGRG | 1 cut(s) | 236 |
| Eco91I | GGTNACC | 1 cut(s) | 1290 |
| EcoO65I | GGTNACC | 1 cut(s) | 1290 |
| EcoRII | CCWGG | 6 cut(s) | 1303, 2268, 2284, 2531, 2796, 3724 |
| EcoRV | GATATC | 2 cut(s) | 1707, 2044 |
| EcoT14I | CCWWGG | 3 cut(s) | 1428, 2547, 3696 |
| EcoT22I | ATGCAT | 2 cut(s) | 1438, 2356 |
| EcoT38I | GRGCYC | 1 cut(s) | 2733 |
| ErhI | CCWWGG | 3 cut(s) | 1428, 2547, 3696 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 243, 275, 2874, 2906 |
| FaqI | GGGAC | 5 cut(s) | 871, 1482, 2142, 2696, 2880 |
| FauI | CCCGC | 1 cut(s) | 855 |
| FauNDI | CATATG | 1 cut(s) | 1267 |
| FbaI | TGATCA | 2 cut(s) | 685, 2569 |
| FblI | GTMKAC | 3 cut(s) | 164, 629, 2265 |
| Fnu4HI | GCNGC | 8 cut(s) | 107, 331, 623, 1647, 2928, 3140, 3302, 3794 |
| FriOI | GRGCYC | 1 cut(s) | 2733 |
| Fsp4HI | GCNGC | 8 cut(s) | 107, 331, 623, 1647, 2928, 3140, 3302, 3794 |
| FspBI | CTAG | 6 cut(s) | 2475, 2645, 2669, 2807, 2915, 3404 |
| GlaI | GCGC | 1 cut(s) | 2283 |
| GluI | GCNGC | 8 cut(s) | 107, 331, 623, 1647, 2928, 3140, 3302, 3794 |
| GsaI | CCCAGC | 1 cut(s) | 1794 |
| GsuI | CTGGAG | 2 cut(s) | 852, 2819 |
| HaeII | RGCGCY | 1 cut(s) | 2285 |
| HaeIII | GGCC | 1 cut(s) | 222 |
| HapII | CCGG | 2 cut(s) | 542, 1850 |
| HgaI | GACGC | 1 cut(s) | 3366 |
| HhaI | GCGC | 1 cut(s) | 2284 |
| Hin6I | GCGC | 1 cut(s) | 2282 |
| HinP1I | GCGC | 1 cut(s) | 2282 |
| HincII | GTYRAC | 2 cut(s) | 2905, 3069 |
| HindII | GTYRAC | 2 cut(s) | 2905, 3069 |
| HindIII | AAGCTT | 6 cut(s) | 257, 1159, 1456, 1858, 1960, 2374 |
| HpaII | CCGG | 2 cut(s) | 542, 1850 |
| HphI | GGTGA | 7 cut(s) | 737, 789, 1013, 2051, 2300, 2720, 3146 |
| Hpy166II | GTNNAC | 6 cut(s) | 165, 630, 1984, 2266, 2905, 3069 |
| Hpy8I | GTNNAC | 6 cut(s) | 165, 630, 1984, 2266, 2905, 3069 |
| Hpy99I | CGWCG | 1 cut(s) | 3382 |
| HpyAV | CCTTC | 9 cut(s) | 206, 584, 833, 1021, 1547, 2030, 2085, 2296, 3113 |
| HpyCH4III | ACNGT | 5 cut(s) | 646, 1001, 1542, 2941, 3081 |
| HpyCH4IV | ACGT | 1 cut(s) | 2610 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 812, 847, 921, 1501, 2924, 3043, 3263 |
| HpySE526I | ACGT | 1 cut(s) | 2610 |
| HspAI | GCGC | 1 cut(s) | 2282 |
| Kpn2I | TCCGGA | 2 cut(s) | 541, 1849 |
| Ksp22I | TGATCA | 2 cut(s) | 685, 2569 |
| LguI | GCTCTTC | 1 cut(s) | 1141 |
| LmnI | GCTCC | 7 cut(s) | 871, 912, 1102, 1318, 1729, 2800, 3271 |
| Lsp1109I | GCAGC | 8 cut(s) | 93, 342, 634, 1658, 2939, 3126, 3288, 3780 |
| MabI | ACCWGGT | 1 cut(s) | 3724 |
| MaeI | CTAG | 6 cut(s) | 2475, 2645, 2669, 2807, 2915, 3404 |
| MaeII | ACGT | 1 cut(s) | 2610 |
| MaeIII | GTNAC | 5 cut(s) | 65, 1290, 2230, 2995, 3462 |
| MfeI | CAATTG | 2 cut(s) | 2079, 2964 |
| MflI | RGATCY | 5 cut(s) | 1651, 1852, 2175, 2427, 2978 |
| MhlI | GDGCHC | 4 cut(s) | 206, 2297, 2733, 3403 |
| MlsI | TGGCCA | 1 cut(s) | 222 |
| MluNI | TGGCCA | 1 cut(s) | 222 |
| MmeI | TCCRAC | 5 cut(s) | 528, 1734, 3063, 3150, 3322 |
| Mox20I | TGGCCA | 1 cut(s) | 222 |
| Mph1103I | ATGCAT | 2 cut(s) | 1438, 2356 |
| MroI | TCCGGA | 2 cut(s) | 541, 1849 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1160, 2886, 3090 |
| MscI | TGGCCA | 1 cut(s) | 222 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1889, 2724, 3294, 3456, 3621 |
| Msp20I | TGGCCA | 1 cut(s) | 222 |
| MspA1I | CMGCKG | 1 cut(s) | 3046 |
| MspI | CCGG | 2 cut(s) | 542, 1850 |
| MspR9I | CCNGG | 6 cut(s) | 1305, 2270, 2286, 2533, 2798, 3726 |
| MunI | CAATTG | 2 cut(s) | 2079, 2964 |
| Mva1269I | GAATGC | 1 cut(s) | 1436 |
| MvaI | CCWGG | 6 cut(s) | 1305, 2270, 2286, 2533, 2798, 3726 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 812, 847, 921, 1501, 2924, 3043, 3263 |
| NcoI | CCATGG | 1 cut(s) | 2547 |
| NdeI | CATATG | 1 cut(s) | 1267 |
| NheI | GCTAGC | 1 cut(s) | 2914 |
| NlaIV | GGNNCC | 6 cut(s) | 205, 448, 1115, 1470, 1854, 2335 |
| NmeAIII | GCCGAG | 1 cut(s) | 936 |
| NmuCI | GTSAC | 1 cut(s) | 2995 |
| NsiI | ATGCAT | 2 cut(s) | 1438, 2356 |
| NspI | RCATGY | 6 cut(s) | 66, 886, 2354, 2388, 2409, 3261 |
| OliI | CACNNNNGTG | 1 cut(s) | 1889 |
| PagI | TCATGA | 3 cut(s) | 394, 439, 568 |
| PciI | ACATGT | 2 cut(s) | 62, 882 |
| PciSI | GCTCTTC | 1 cut(s) | 1141 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3854 |
| PctI | GAATGC | 1 cut(s) | 1436 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1160, 2886, 3090 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1123 |
| PkrI | GCNGC | 8 cut(s) | 108, 332, 624, 1648, 2929, 3141, 3303, 3795 |
| PscI | ACATGT | 2 cut(s) | 62, 882 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2154 |
| PshBI | ATTAAT | 1 cut(s) | 3348 |
| PsiI | TTATAA | 1 cut(s) | 993 |
| Psp6I | CCWGG | 6 cut(s) | 1303, 2268, 2284, 2531, 2796, 3724 |
| PspEI | GGTNACC | 1 cut(s) | 1290 |
| PspFI | CCCAGC | 1 cut(s) | 1790 |
| PspGI | CCWGG | 6 cut(s) | 1303, 2268, 2284, 2531, 2796, 3724 |
| PspN4I | GGNNCC | 6 cut(s) | 205, 448, 1115, 1470, 1854, 2335 |
| PspPI | GGNCC | 3 cut(s) | 1469, 3836, 3850 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3222, 3254 |
| PstI | CTGCAG | 2 cut(s) | 1648, 3193 |
| PstNI | CAGNNNCTG | 3 cut(s) | 770, 875, 3725 |
| PsuI | RGATCY | 5 cut(s) | 1651, 1852, 2175, 2427, 2978 |
| PvuII | CAGCTG | 1 cut(s) | 3046 |
| RsaI | GTAC | 7 cut(s) | 128, 969, 1533, 1870, 2308, 2349, 3418 |
| RsaNI | GTAC | 7 cut(s) | 127, 968, 1532, 1869, 2307, 2348, 3417 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1889, 2724, 3294, 3456, 3621 |
| SapI | GCTCTTC | 1 cut(s) | 1141 |
| SatI | GCNGC | 8 cut(s) | 107, 331, 623, 1647, 2928, 3140, 3302, 3794 |
| Sau96I | GGNCC | 3 cut(s) | 1469, 3836, 3850 |
| ScaI | AGTACT | 1 cut(s) | 3418 |
| ScrFI | CCNGG | 6 cut(s) | 1305, 2270, 2286, 2533, 2798, 3726 |
| SduI | GDGCHC | 4 cut(s) | 206, 2297, 2733, 3403 |
| SexAI | ACCWGGT | 1 cut(s) | 3724 |
| SfcI | CTRYAG | 3 cut(s) | 1644, 3189, 3717 |
| SinI | GGWCC | 3 cut(s) | 1469, 3836, 3850 |
| SmiI | ATTTAAAT | 1 cut(s) | 2448 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1889, 2724, 3294, 3456, 3621 |
| SmlI | CTYRAG | 2 cut(s) | 1385, 2152 |
| SmoI | CTYRAG | 2 cut(s) | 1385, 2152 |
| SpeI | ACTAGT | 1 cut(s) | 2806 |
| SsiI | CCGC | 6 cut(s) | 785, 848, 2114, 2576, 2918, 3642 |
| SspI | AATATT | 2 cut(s) | 1222, 1993 |
| SspMI | CTAG | 6 cut(s) | 2475, 2645, 2669, 2807, 2915, 3404 |
| StyD4I | CCNGG | 6 cut(s) | 1303, 2268, 2284, 2531, 2796, 3724 |
| StyI | CCWWGG | 3 cut(s) | 1428, 2547, 3696 |
| SwaI | ATTTAAAT | 1 cut(s) | 2448 |
| TaaI | ACNGT | 5 cut(s) | 646, 1001, 1542, 2941, 3081 |
| TaiI | ACGT | 1 cut(s) | 2613 |
| TaqI | TCGA | 7 cut(s) | 243, 2018, 2756, 2792, 2825, 2871, 3380 |
| TatI | WGTACW | 4 cut(s) | 126, 967, 2347, 3416 |
| TscAI | CASTG | 9 cut(s) | 193, 724, 931, 1678, 2073, 2695, 2721, 3198, 3259 |
| TseFI | GTSAC | 1 cut(s) | 2995 |
| TseI | GCWGC | 8 cut(s) | 106, 330, 622, 1646, 2927, 3139, 3301, 3793 |
| Tsp45I | GTSAC | 1 cut(s) | 2995 |
| TspGWI | ACGGA | 3 cut(s) | 1433, 2312, 3863 |
| TspRI | CASTG | 9 cut(s) | 193, 724, 931, 1678, 2073, 2695, 2721, 3198, 3259 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1123 |
| VpaK11BI | GGWCC | 3 cut(s) | 1469, 3836, 3850 |
| VspI | ATTAAT | 1 cut(s) | 3348 |
| XbaI | TCTAGA | 1 cut(s) | 3403 |
| XceI | RCATGY | 6 cut(s) | 66, 886, 2354, 2388, 2409, 3261 |
| XmiI | GTMKAC | 3 cut(s) | 164, 629, 2265 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1160, 2886, 3090 |
| XspI | CTAG | 6 cut(s) | 2475, 2645, 2669, 2807, 2915, 3404 |
| ZrmI | AGTACT | 1 cut(s) | 3418 |
| Zsp2I | ATGCAT | 2 cut(s) | 1438, 2356 |