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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G17910 AT5G17910 AT5G17910 |
| fragaria_vesca | FvH4_1g29420 FvH4_1g29420 FvH4_1g29420 FvH4_2g10091 FvH4_2g10092 |
| malus_domestica | MD05G1057800.v1.1 MD12G1015000.v1.1 MD14G1012900.v1.1 |
| prunus_persica | Prupe.7G025700_v2.0.a1 Prupe.7G025700_v2.0.a1 Prupe.7G025700_v2.0.a1 Prupe.8G087600_v2.0.a1 Prupe.8G087600_v2.0.a1 Prupe.8G087600_v2.0.a1 |
| pyrus_communis | pycom05g04890 pycom12g01220 pycom14g01090 |
| rosa_chinensis | RchiOBHm_Chr3g0495491 RchiOBHm_Chr6g0267051 |
| rosa_laevigata | RLG00000014046 RLG00000022616 |
| rosa_multiflora | Rmu_co8285861.1_g000001 Rmu_sc0004755.1_g000026 Rmu_sc0005599.1_g000001 Rmu_sc0006163.1_g000016 Rmu_sc0013804.1_g000006 |
| rosa_roxburghii | Rroxscaffold_6G00390490 Rroxscaffold_7G00201200 |
| rosa_rugosa | Rorug03G0273800 Rorug06G0028700 |
| rosa_samantha | Rh3AG321400 Rh3BG356700 Rh3CG353500 Rh3DG356000 Rh6AG150200 Rh6BG151100 Rh6CG146500 Rh6DG135200 |
| rosa_wichuraiana | Rw3G028090 Rw6G013020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 72 |
| AccB1I | GGYRCC | 2 cut(s) | 424, 2222 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1021 |
| AccI | GTMKAC | 4 cut(s) | 363, 551, 2028, 2648 |
| AciI | CCGC | 8 cut(s) | 547, 761, 891, 1952, 2132, 2654, 3173, 3323 |
| AclWI | GGATC | 8 cut(s) | 817, 2651, 2664, 3039, 3052, 3490, 3649, 3664 |
| AcoI | YGGCCR | 2 cut(s) | 223, 1071 |
| AcuI | CTGAAG | 4 cut(s) | 807, 1336, 1425, 2340 |
| AcyI | GRCGYC | 2 cut(s) | 366, 425 |
| AdeI | CACNNNGTG | 1 cut(s) | 920 |
| AfaI | GTAC | 5 cut(s) | 909, 1425, 1773, 2156, 2821 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 617, 766, 917, 1021, 1196, 1672, 2978 |
| AflIII | ACRYGT | 1 cut(s) | 65 |
| AhlI | ACTAGT | 1 cut(s) | 2110 |
| AjnI | CCWGG | 7 cut(s) | 278, 286, 846, 1195, 1665, 2420, 2679 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1004, 1036, 1313, 1345, 3783, 3815 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3648, 3680 |
| Alw21I | GWGCWC | 5 cut(s) | 594, 707, 1994, 2633, 2703 |
| Alw26I | GTCTC | 6 cut(s) | 486, 612, 1278, 2256, 3547, 3709 |
| Alw44I | GTGCAC | 1 cut(s) | 590 |
| AlwI | GGATC | 8 cut(s) | 817, 2651, 2664, 3039, 3052, 3490, 3649, 3664 |
| AoxI | GGCC | 4 cut(s) | 223, 372, 1071, 2829 |
| ApaLI | GTGCAC | 1 cut(s) | 590 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1680, 1712 |
| AseI | ATTAAT | 1 cut(s) | 435 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1642 |
| AspLEI | GCGC | 3 cut(s) | 427, 1146, 2239 |
| AspS9I | GGNCC | 3 cut(s) | 373, 844, 1912 |
| AsuC2I | CCSGG | 1 cut(s) | 685 |
| AvaII | GGWCC | 2 cut(s) | 844, 1912 |
| BaeGI | GKGCMC | 1 cut(s) | 594 |
| BalI | TGGCCA | 1 cut(s) | 225 |
| BamHI | GGATCC | 2 cut(s) | 2656, 3044 |
| BanI | GGYRCC | 2 cut(s) | 424, 2222 |
| BanII | GRGCYC | 1 cut(s) | 707 |
| BauI | CACGAG | 1 cut(s) | 1388 |
| BbsI | GAAGAC | 1 cut(s) | 1659 |
| Bbv12I | GWGCWC | 5 cut(s) | 594, 707, 1994, 2633, 2703 |
| BceAI | ACGGC | 4 cut(s) | 353, 1086, 2010, 2667 |
| BciT130I | CCWGG | 7 cut(s) | 280, 288, 848, 1197, 1667, 2422, 2681 |
| BciVI | GTATCC | 2 cut(s) | 2542, 2929 |
| BclI | TGATCA | 1 cut(s) | 2458 |
| BcnI | CCSGG | 1 cut(s) | 685 |
| BcoDI | GTCTC | 6 cut(s) | 486, 612, 1278, 2256, 3547, 3709 |
| BcuI | ACTAGT | 1 cut(s) | 2110 |
| BfaI | CTAG | 7 cut(s) | 182, 1742, 2111, 2364, 2781, 2801, 2900 |
| BfmI | CTRYAG | 2 cut(s) | 1536, 3627 |
| BfoI | RGCGCY | 1 cut(s) | 428 |
| BfuI | GTATCC | 2 cut(s) | 2542, 2929 |
| BlpI | GCTNAGC | 3 cut(s) | 3111, 3261, 3411 |
| Bme1390I | CCNGG | 8 cut(s) | 280, 288, 685, 848, 1197, 1667, 2422, 2681 |
| Bme18I | GGWCC | 2 cut(s) | 844, 1912 |
| BmgT120I | GGNCC | 3 cut(s) | 373, 844, 1912 |
| BmiI | GGNNCC | 9 cut(s) | 208, 285, 426, 1013, 1914, 2022, 2224, 2658, 3046 |
| BmrFI | CCNGG | 8 cut(s) | 280, 288, 685, 848, 1197, 1667, 2422, 2681 |
| BpiI | GAAGAC | 1 cut(s) | 1659 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 326, 358 |
| BpmI | CTGGAG | 1 cut(s) | 2958 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 3111, 3261, 3411 |
| BpuEI | CTTGAG | 6 cut(s) | 329, 1262, 1985, 2106, 2717, 3765 |
| BpuMI | CCSGG | 1 cut(s) | 685 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2007 |
| BsaHI | GRCGYC | 2 cut(s) | 366, 425 |
| BsaI | GGTCTC | 1 cut(s) | 1278 |
| BsaJI | CCNNGG | 9 cut(s) | 279, 369, 613, 847, 1195, 1633, 1665, 2327, 2436 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 2745, 2759, 2775, 2789, 3211, 3241, 3361, 3391 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 617, 766, 917, 1021, 1196, 1672, 2978 |
| Bse118I | RCCGGY | 2 cut(s) | 386, 910 |
| Bse1I | ACTGG | 3 cut(s) | 2024, 2832, 3048 |
| Bse3DI | GCAATG | 3 cut(s) | 3196, 3346, 3496 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2007 |
| BseBI | CCWGG | 7 cut(s) | 280, 288, 848, 1197, 1667, 2422, 2681 |
| BseDI | CCNNGG | 9 cut(s) | 279, 369, 613, 847, 1195, 1633, 1665, 2327, 2436 |
| BseJI | GATNNNNATC | 1 cut(s) | 2007 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 617, 766, 917, 1021, 1196, 1672, 2978 |
| BseMI | GCAATG | 3 cut(s) | 3196, 3346, 3496 |
| BseNI | ACTGG | 3 cut(s) | 2024, 2832, 3048 |
| BseRI | GAGGAG | 7 cut(s) | 633, 1450, 1838, 1982, 2780, 3032, 3035 |
| BseSI | GKGCMC | 1 cut(s) | 594 |
| BseX3I | CGGCCG | 1 cut(s) | 1071 |
| BseYI | CCCAGC | 1 cut(s) | 2286 |
| BsgI | GTGCAG | 4 cut(s) | 113, 172, 467, 2846 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1074 |
| BshFI | GGCC | 4 cut(s) | 225, 374, 1073, 2831 |
| BshNI | GGYRCC | 2 cut(s) | 424, 2222 |
| BsiEI | CGRYCG | 1 cut(s) | 1074 |
| BsiHKAI | GWGCWC | 5 cut(s) | 594, 707, 1994, 2633, 2703 |
| BsiSI | CCGG | 3 cut(s) | 387, 684, 911 |
| BslFI | GGGAC | 1 cut(s) | 2743 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 617, 766, 917, 1021, 1196, 1672, 2978 |
| BsmAI | GTCTC | 6 cut(s) | 486, 612, 1278, 2256, 3547, 3709 |
| BsmFI | GGGAC | 1 cut(s) | 2743 |
| BsmI | GAATGC | 2 cut(s) | 1328, 2350 |
| BsnI | GGCC | 4 cut(s) | 225, 374, 1073, 2831 |
| Bso31I | GGTCTC | 1 cut(s) | 1278 |
| Bsp1286I | GDGCHC | 5 cut(s) | 594, 707, 1994, 2633, 2703 |
| Bsp1407I | TGTACA | 1 cut(s) | 2154 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 3111, 3261, 3411 |
| Bsp19I | CCATGG | 2 cut(s) | 1633, 2436 |
| BspACI | CCGC | 8 cut(s) | 547, 761, 891, 1952, 2132, 2654, 3173, 3323 |
| BspANI | GGCC | 4 cut(s) | 225, 374, 1073, 2831 |
| BspHI | TCATGA | 3 cut(s) | 655, 1986, 2746 |
| BspLI | GGNNCC | 9 cut(s) | 208, 285, 426, 1013, 1914, 2022, 2224, 2658, 3046 |
| BspPI | GGATC | 8 cut(s) | 817, 2651, 2664, 3039, 3052, 3490, 3649, 3664 |
| BspT107I | GGYRCC | 2 cut(s) | 424, 2222 |
| BspTNI | GGTCTC | 1 cut(s) | 1278 |
| BsrDI | GCAATG | 3 cut(s) | 3196, 3346, 3496 |
| BsrFI | RCCGGY | 2 cut(s) | 386, 910 |
| BsrGI | TGTACA | 1 cut(s) | 2154 |
| BsrI | ACTGG | 3 cut(s) | 2024, 2832, 3048 |
| BssAI | RCCGGY | 2 cut(s) | 386, 910 |
| BssECI | CCNNGG | 9 cut(s) | 279, 369, 613, 847, 1195, 1633, 1665, 2327, 2436 |
| BssNAI | GTATAC | 1 cut(s) | 552 |
| BssNI | GRCGYC | 2 cut(s) | 366, 425 |
| BssSI | CACGAG | 1 cut(s) | 1388 |
| BssT1I | CCWWGG | 4 cut(s) | 613, 1633, 2327, 2436 |
| Bst1107I | GTATAC | 1 cut(s) | 552 |
| Bst2BI | CACGAG | 1 cut(s) | 1388 |
| Bst2UI | CCWGG | 7 cut(s) | 280, 288, 848, 1197, 1667, 2422, 2681 |
| Bst6I | CTCTTC | 3 cut(s) | 1815, 2205, 2493 |
| BstACI | GRCGYC | 2 cut(s) | 366, 425 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1316 |
| BstAUI | TGTACA | 1 cut(s) | 2154 |
| BstC8I | GCNNGC | 7 cut(s) | 349, 388, 518, 789, 1317, 2094, 2829 |
| BstDSI | CCRYGG | 3 cut(s) | 369, 1633, 2436 |
| BstH2I | RGCGCY | 1 cut(s) | 428 |
| BstHHI | GCGC | 3 cut(s) | 427, 1146, 2239 |
| BstMAI | GTCTC | 6 cut(s) | 486, 612, 1278, 2256, 3547, 3709 |
| BstMCI | CGRYCG | 1 cut(s) | 1074 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 725, 760, 1316, 1325, 1393, 2243 |
| BstNI | CCWGG | 7 cut(s) | 280, 288, 848, 1197, 1667, 2422, 2681 |
| BstNSI | RCATGY | 3 cut(s) | 69, 1189, 1319 |
| BstSCI | CCNGG | 8 cut(s) | 278, 286, 683, 846, 1195, 1665, 2420, 2679 |
| BstSFI | CTRYAG | 2 cut(s) | 1536, 3627 |
| BstSLI | GKGCMC | 1 cut(s) | 594 |
| BstV2I | GAAGAC | 1 cut(s) | 1659 |
| BstX2I | RGATCY | 4 cut(s) | 809, 2656, 3044, 3656 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1219, 1706 |
| BstYI | RGATCY | 4 cut(s) | 809, 2656, 3044, 3656 |
| BstZ17I | GTATAC | 1 cut(s) | 552 |
| BstZI | CGGCCG | 1 cut(s) | 1071 |
| BsuI | GTATCC | 2 cut(s) | 2542, 2929 |
| BsuRI | GGCC | 4 cut(s) | 225, 374, 1073, 2831 |
| BtgI | CCRYGG | 3 cut(s) | 369, 1633, 2436 |
| BtgZI | GCGATG | 2 cut(s) | 306, 1296 |
| BtsI | GCAGTG | 1 cut(s) | 189 |
| Cac8I | GCNNGC | 7 cut(s) | 349, 388, 518, 789, 1317, 2094, 2829 |
| CciI | TCATGA | 3 cut(s) | 655, 1986, 2746 |
| CfoI | GCGC | 3 cut(s) | 427, 1146, 2239 |
| Cfr10I | RCCGGY | 2 cut(s) | 386, 910 |
| Cfr13I | GGNCC | 3 cut(s) | 373, 844, 1912 |
| CseI | GACGC | 2 cut(s) | 374, 2057 |
| Csp6I | GTAC | 5 cut(s) | 908, 1424, 1772, 2155, 2820 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 510, 545, 2913, 2948 |
| CviQI | GTAC | 5 cut(s) | 908, 1424, 1772, 2155, 2820 |
| DinI | GGCGCC | 1 cut(s) | 426 |
| DraIII | CACNNNGTG | 1 cut(s) | 920 |
| EaeI | YGGCCR | 2 cut(s) | 223, 1071 |
| EagI | CGGCCG | 1 cut(s) | 1071 |
| Eam1104I | CTCTTC | 3 cut(s) | 1815, 2205, 2493 |
| EarI | CTCTTC | 3 cut(s) | 1815, 2205, 2493 |
| EciI | GGCGGA | 4 cut(s) | 906, 2669, 3188, 3338 |
| Ecl136II | GAGCTC | 1 cut(s) | 705 |
| EclXI | CGGCCG | 1 cut(s) | 1071 |
| Eco130I | CCWWGG | 4 cut(s) | 613, 1633, 2327, 2436 |
| Eco24I | GRGCYC | 1 cut(s) | 707 |
| Eco31I | GGTCTC | 1 cut(s) | 1278 |
| Eco32I | GATATC | 2 cut(s) | 54, 2103 |
| Eco47I | GGWCC | 2 cut(s) | 844, 1912 |
| Eco52I | CGGCCG | 1 cut(s) | 1071 |
| Eco53kI | GAGCTC | 1 cut(s) | 705 |
| Eco57I | CTGAAG | 4 cut(s) | 807, 1336, 1425, 2340 |
| EcoICRI | GAGCTC | 1 cut(s) | 705 |
| EcoRI | GAATTC | 1 cut(s) | 3430 |
| EcoRII | CCWGG | 7 cut(s) | 278, 286, 846, 1195, 1665, 2420, 2679 |
| EcoRV | GATATC | 2 cut(s) | 54, 2103 |
| EcoT14I | CCWWGG | 4 cut(s) | 613, 1633, 2327, 2436 |
| EcoT22I | ATGCAT | 2 cut(s) | 1330, 1618 |
| EcoT38I | GRGCYC | 1 cut(s) | 707 |
| EgeI | GGCGCC | 1 cut(s) | 426 |
| EheI | GGCGCC | 1 cut(s) | 426 |
| ErhI | CCWWGG | 4 cut(s) | 613, 1633, 2327, 2436 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1423, 1455 |
| FaqI | GGGAC | 1 cut(s) | 2743 |
| FauI | CCCGC | 1 cut(s) | 768 |
| FbaI | TGATCA | 1 cut(s) | 2458 |
| FblI | GTMKAC | 4 cut(s) | 363, 551, 2028, 2648 |
| FriOI | GRGCYC | 1 cut(s) | 707 |
| FspBI | CTAG | 7 cut(s) | 182, 1742, 2111, 2364, 2781, 2801, 2900 |
| GlaI | GCGC | 3 cut(s) | 426, 1145, 2238 |
| GsaI | CCCAGC | 1 cut(s) | 2290 |
| GsuI | CTGGAG | 1 cut(s) | 2958 |
| HaeII | RGCGCY | 1 cut(s) | 428 |
| HaeIII | GGCC | 4 cut(s) | 225, 374, 1073, 2831 |
| HapII | CCGG | 3 cut(s) | 387, 684, 911 |
| HgaI | GACGC | 2 cut(s) | 374, 2057 |
| HhaI | GCGC | 3 cut(s) | 427, 1146, 2239 |
| Hin1I | GRCGYC | 2 cut(s) | 366, 425 |
| Hin6I | GCGC | 3 cut(s) | 425, 1144, 2237 |
| HinP1I | GCGC | 3 cut(s) | 425, 1144, 2237 |
| HincII | GTYRAC | 5 cut(s) | 168, 364, 1630, 2649, 2791 |
| HindII | GTYRAC | 5 cut(s) | 168, 364, 1630, 2649, 2791 |
| HindIII | AAGCTT | 5 cut(s) | 1057, 1348, 1369, 1750, 1846 |
| HpaII | CCGG | 3 cut(s) | 387, 684, 911 |
| Hpy99I | CGWCG | 3 cut(s) | 368, 712, 2653 |
| HpyAV | CCTTC | 7 cut(s) | 746, 1038, 1439, 2185, 3092, 3242, 3392 |
| HpyCH4IV | ACGT | 3 cut(s) | 1656, 3141, 3291 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 725, 760, 1316, 1325, 1393, 2243 |
| HpySE526I | ACGT | 3 cut(s) | 1656, 3141, 3291 |
| Hsp92I | GRCGYC | 2 cut(s) | 366, 425 |
| HspAI | GCGC | 3 cut(s) | 425, 1144, 2237 |
| KasI | GGCGCC | 1 cut(s) | 424 |
| KroI | GCCGGC | 1 cut(s) | 386 |
| KroNI | GCCGGC | 1 cut(s) | 388 |
| Ksp22I | TGATCA | 1 cut(s) | 2458 |
| LmnI | GCTCC | 6 cut(s) | 784, 1000, 1210, 1361, 2020, 2683 |
| MaeI | CTAG | 7 cut(s) | 182, 1742, 2111, 2364, 2781, 2801, 2900 |
| MaeII | ACGT | 3 cut(s) | 1656, 3141, 3291 |
| MaeIII | GTNAC | 5 cut(s) | 461, 1454, 1783, 2366, 3217 |
| MfeI | CAATTG | 1 cut(s) | 2253 |
| MflI | RGATCY | 4 cut(s) | 809, 2656, 3044, 3656 |
| MhlI | GDGCHC | 5 cut(s) | 594, 707, 1994, 2633, 2703 |
| MlsI | TGGCCA | 1 cut(s) | 225 |
| MluNI | TGGCCA | 1 cut(s) | 225 |
| Mly113I | GGCGCC | 1 cut(s) | 425 |
| MmeI | TCCRAC | 8 cut(s) | 255, 483, 822, 1626, 1723, 1737, 2406, 2536 |
| Mox20I | TGGCCA | 1 cut(s) | 225 |
| Mph1103I | ATGCAT | 2 cut(s) | 1330, 1618 |
| MroNI | GCCGGC | 1 cut(s) | 386 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1642 |
| MscI | TGGCCA | 1 cut(s) | 225 |
| MseI | TTAA | 8 cut(s) | 215, 435, 951, 1067, 1116, 1404, 2016, 2913 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1647 |
| Msp20I | TGGCCA | 1 cut(s) | 225 |
| MspA1I | CMGCKG | 3 cut(s) | 547, 2000, 2132 |
| MspI | CCGG | 3 cut(s) | 387, 684, 911 |
| MspR9I | CCNGG | 8 cut(s) | 280, 288, 685, 848, 1197, 1667, 2422, 2681 |
| MunI | CAATTG | 1 cut(s) | 2253 |
| Mva1269I | GAATGC | 2 cut(s) | 1328, 2350 |
| MvaI | CCWGG | 7 cut(s) | 280, 288, 848, 1197, 1667, 2422, 2681 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 725, 760, 1316, 1325, 1393, 2243 |
| NaeI | GCCGGC | 1 cut(s) | 388 |
| NarI | GGCGCC | 1 cut(s) | 425 |
| NciI | CCSGG | 1 cut(s) | 685 |
| NcoI | CCATGG | 2 cut(s) | 1633, 2436 |
| NgoMIV | GCCGGC | 1 cut(s) | 386 |
| NlaIV | GGNNCC | 9 cut(s) | 208, 285, 426, 1013, 1914, 2022, 2224, 2658, 3046 |
| NmeAIII | GCCGAG | 1 cut(s) | 1099 |
| NmuCI | GTSAC | 2 cut(s) | 461, 3217 |
| NsiI | ATGCAT | 2 cut(s) | 1330, 1618 |
| NspI | RCATGY | 3 cut(s) | 69, 1189, 1319 |
| PaeI | GCATGC | 1 cut(s) | 1319 |
| PagI | TCATGA | 3 cut(s) | 655, 1986, 2746 |
| PciI | ACATGT | 1 cut(s) | 65 |
| PctI | GAATGC | 2 cut(s) | 1328, 2350 |
| PdiI | GCCGGC | 1 cut(s) | 388 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1642 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1021 |
| PfoI | TCCNGGA | 1 cut(s) | 2679 |
| PluTI | GGCGCC | 1 cut(s) | 428 |
| PscI | ACATGT | 1 cut(s) | 65 |
| PshBI | ATTAAT | 1 cut(s) | 435 |
| PsiI | TTATAA | 1 cut(s) | 72 |
| Psp124BI | GAGCTC | 1 cut(s) | 707 |
| Psp6I | CCWGG | 7 cut(s) | 278, 286, 846, 1195, 1665, 2420, 2679 |
| PspFI | CCCAGC | 1 cut(s) | 2286 |
| PspGI | CCWGG | 7 cut(s) | 278, 286, 846, 1195, 1665, 2420, 2679 |
| PspN4I | GGNNCC | 9 cut(s) | 208, 285, 426, 1013, 1914, 2022, 2224, 2658, 3046 |
| PspPI | GGNCC | 3 cut(s) | 373, 844, 1912 |
| PsuI | RGATCY | 4 cut(s) | 809, 2656, 3044, 3656 |
| PvuII | CAGCTG | 1 cut(s) | 2000 |
| RsaI | GTAC | 5 cut(s) | 909, 1425, 1773, 2156, 2821 |
| RsaNI | GTAC | 5 cut(s) | 908, 1424, 1772, 2155, 2820 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1647 |
| SacI | GAGCTC | 1 cut(s) | 707 |
| SalI | GTCGAC | 2 cut(s) | 362, 2647 |
| SaqAI | TTAA | 8 cut(s) | 215, 435, 951, 1067, 1116, 1404, 2016, 2913 |
| Sau96I | GGNCC | 3 cut(s) | 373, 844, 1912 |
| ScrFI | CCNGG | 8 cut(s) | 280, 288, 685, 848, 1197, 1667, 2422, 2681 |
| SduI | GDGCHC | 5 cut(s) | 594, 707, 1994, 2633, 2703 |
| SfcI | CTRYAG | 2 cut(s) | 1536, 3627 |
| SfoI | GGCGCC | 1 cut(s) | 426 |
| SinI | GGWCC | 2 cut(s) | 844, 1912 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1647 |
| SmlI | CTYRAG | 6 cut(s) | 308, 1277, 1964, 2121, 2696, 3780 |
| SmoI | CTYRAG | 6 cut(s) | 308, 1277, 1964, 2121, 2696, 3780 |
| SpeI | ACTAGT | 1 cut(s) | 2110 |
| SphI | GCATGC | 1 cut(s) | 1319 |
| SsiI | CCGC | 8 cut(s) | 547, 761, 891, 1952, 2132, 2654, 3173, 3323 |
| SspDI | GGCGCC | 1 cut(s) | 424 |
| SspMI | CTAG | 7 cut(s) | 182, 1742, 2111, 2364, 2781, 2801, 2900 |
| SstI | GAGCTC | 1 cut(s) | 707 |
| StyD4I | CCNGG | 8 cut(s) | 278, 286, 683, 846, 1195, 1665, 2420, 2679 |
| StyI | CCWWGG | 4 cut(s) | 613, 1633, 2327, 2436 |
| TaiI | ACGT | 3 cut(s) | 1659, 3144, 3294 |
| TaqI | TCGA | 7 cut(s) | 363, 392, 571, 1293, 2648, 3428, 3644 |
| TatI | WGTACW | 2 cut(s) | 2154, 2819 |
| Tru1I | TTAA | 8 cut(s) | 215, 435, 951, 1067, 1116, 1404, 2016, 2913 |
| Tru9I | TTAA | 8 cut(s) | 215, 435, 951, 1067, 1116, 1404, 2016, 2913 |
| TseFI | GTSAC | 2 cut(s) | 461, 3217 |
| Tsp45I | GTSAC | 2 cut(s) | 461, 3217 |
| TspGWI | ACGGA | 4 cut(s) | 941, 1325, 1604, 3548 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1021 |
| VneI | GTGCAC | 1 cut(s) | 590 |
| VpaK11BI | GGWCC | 2 cut(s) | 844, 1912 |
| VspI | ATTAAT | 1 cut(s) | 435 |
| XbaI | TCTAGA | 2 cut(s) | 1741, 2899 |
| XceI | RCATGY | 3 cut(s) | 69, 1189, 1319 |
| XmiI | GTMKAC | 4 cut(s) | 363, 551, 2028, 2648 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1642 |
| XspI | CTAG | 7 cut(s) | 182, 1742, 2111, 2364, 2781, 2801, 2900 |
| Zsp2I | ATGCAT | 2 cut(s) | 1330, 1618 |