Rroxscaffold_7G00201200

No description available

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
48722574 .. 48729760
7187 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00201200.1

Sequence Viewer

Length: 4656 bp
ATGTCCCCTGATGATTCTGGGGTTGGGTCTGATAGGAGTAATGATGGCAGTAATGAGTCAGATGATGAGGATACTGAAATCCGGGGTCGAGGAGTAGAAGAGTATGGGGTTGATGATAATGATGGCGATGAGGAAGAAGCACATGATGGTAAAGAGGATGAAAGCAAATCTGCAATCAAGTGGACAGAGGATGACCAAAAGAATCTCAGGGACTTGGGGAATTTGGAGCTTGAAAGGAACCGATGCTTGGAGAACCTTATTACAAGGAGAAGTGCATCAAAAAGACAGAACCCTGAGAAGAATCTGATAGATTTAGATACTTCTGAAAATCCCTTTAATATAACACAAATTTCGACAACAAGACACAACCCTTTTGATCTCTCACATGATTCCTATGATGATATGGGGTTGCCACCCATTCCTGGTTCTGCTCCATCTACTTACTTACCAGGAAGAAACCCCTTTGATCTTCTGTATGAGCCAAATGAAGAAAATCCTGACCTCAAGGGAGATCATGTTGAGCAAGAATTTGCGACAGTTGTCCCCAATAATACATTCTTGTGCAGGCATGCAAGCATTAGACCATCTAGGTTAGGGGATGCCAGGCAAGAGAGGCAAGATCTTAAATGGAGACCTGTTTTTGTACCAGAACAGTTGGCTTCAGAAGAAACAAGCTATTGCTCATTCCAAAGATTACCAAGAGAAGCTAGTGATTCCAAGTTGAGTTCCATTCCTGATATTGAGTCAGTGAGTTCCGGAGAAGATCTGGATGAAAGGAAGTTCAATGAGCGCGTTAAAGAAGCAGAAGTGATCTCCAATATATACCAAGCTTCTGAGCTTGTTGACCTTAGAAGGCATTCTTCTAAAGATCTAGATCATCTGGAAATGGAACGTCCTGGGAAAAAAGATGTCCAGCATGATGAGCCGGAAATAAAATTGGGCCGGGTGGAGAATGGGAATGCAAGCTTGTCTGGTACAGGAGGATTTGTTATTCCTGTGGAACCTATTGTTAATGCAACTTATTTGAAACCAGAAGCATTTGAAGATAAAAACAGCAGTAGGTCAAGCCTGTCATCGTCATCAGAAGCAGATGAAAAATCTTCAGATTTGAGGAAAGATGGATCAAAATTTTTTGAGCCATTTGAGACAGAAGAGCAAACAATGAGTGGAATGCTGGATGACAATCAACATAAGGAGCCAGTCTATGACACAAGCCCCCCAGCATCTGCAAAGGTCCTTTCCTTTAACTCCATTTCTTCTGATATTCAAGCAGAAATATCTGAAGTGGTTACACTTCCATCATTGGCTGAAATGTGTGTTCCCTCCGTAGACCAAGCCACAGATTCAGACTTTCATGGTAAAATCATAGAAGAGGGTACTTCAGGTAATGAACAGATTGGTGCCACCTCACATGTACGTGCATCAGTTGAAAATGGAAGAGATCCTGTGGAATGCAACCGGCTCTTCTTAACAGCTTCTCATTCAGATGTAAATGATGATCTCCCTAAGAATTTGAATGTGAAAGCAGCTTTTACAGACTCTAGTCCTCAGTATGTTTCTTCGAAAGATAAAATGCCAGCAGAGGAGAAAAACTTATTCTTGTCCGATATGCCATCTTTCAATGATCATTTTGCATTTCCTGAACCACGTATCATCTTATCAGAGTCAAAAGAAGATTCAAGCATCAAGGACTTAAATGCAGTTGGAGTCCCAGACCCCCCTGTGGGTGTAAAATCCACCTCAAGCAAGGTGATAGAATCAAGCAACGAAGCATCTGGCGTCCAACAAACTATCAGTACTCATATTGCTATGGAGCAAGTCTCAGAAGCTAATGAGCTGCCAAAGCCATCAAATTCCAAAGATGGGTCAGTGGAAGTAGGAACTACTGCAGTGGATTCTACAAAGGAGATTGCATCAAGCAATGCAGGAACAAGTATTCAAGGAACTGTCATGCCTCATGTTTCTCCAAAGCAATTCTCAGAAGCTAATGTTGGTGAGCAGACACAACCATCAAATTCAAAAGATAAATCGTCAAAAGTGGAAACTAGTACAAAGGGTTCTACCAAGGAGATTTCATCAAGCAACACAGAAACTGGTGTTAAAGAACCTATTGCTACTCCTAATTCTCCGAAGGAAGTCTCAAAAACTGGTGTCAAAGAACCGGTCACTACTCCTAATTCTCCAAAGAAAGTCTCAGAAAATAATGATCCTGTGCTGCCTATTTCATCAAAATTCAAGGATGGGTCAACAGAATTAGGAACCAAATCTTCTCCGAAGAAAGTCTCAGAAGCTAATGATTGCGAGGTGCCTAAACCATCAAATTCAAAGGATGGGTCGACAGAATTTGGAACCAATGCAATGGGCACTACCAAGGAGATTACATCAATTAATATAGGAACTGCTGTTCAGGAAACAGTTACCACTGATCATGCTCCTAAGGAGGTTTCAGAAGATAATGTTGGTGAGCTGCCAAAACTATCAAATCCAAAAGATGGATCTACAGACGTTGGAAATAATACAGTGGGTTCTACCAAGGACATTGCTCTAAGCAGGACAGGATCTGGTGTTCACGAAACTGCTGAAACTCCTCTGAAGCAAGTCTCAGAAAGTGATGTCAGTAAGCTGCCAAAATTGTCAAAGGACATTGCATTAAGCAATACTGGATCTGGTGTTCAAGAAACTGCCACTACTCCTGTGAAAGAAGTCTCAAAAACTGATGTCAGTGAGTTGCCAAAATCGTCAAAGGATGAACTAGCAAAAGTAGCAACTAATGATGCAGTTGGTTCTACCACGAGTCTTCAAGAAACTGCCCCTACTGTTCCGAAGCAAATCTCCAAAGGTGATCTTAGTGAGTTGCCAAAATCATCAAATTCAAAGGATGGATCGAATAAAATAGAAAGTAATGCAGTGGGTTCTGCCAAGGAGATTGCATCAAATACTATAGGAACTGGTGTTCAAGAAACTGTCTCTACTCAAACTCCTGTAAAGGAATTATTAGAAGTTAATGTTGGAGACCAGCCAAAACCATCAGATTCAAAAGATGAACATAAAGAAATAGAAATTAATGCAGTGAGTTTTACAAAGGAGACTGCATCAAAAAATGCCAGATCTGGTGTAAAAGAAACAGTTACTACTGACCAAAGGAAAGTCTCAGAAGGTATTTTAATTGAGCTGCCAAAAACGTCGAATTCAAAGGATGAATCATTGGAAGTAGCAACTAGTAATGCAGTGGGTTCTACTAAGAATGTACAAGAGACTGCCAGTAATCCTTTGGAAGAAGTTTCAGAAGGTAATGTCTTTGAGCTGCCAAAACCTTCAAACTCAAAGGATGGATCACCAGGAGTAACTAATGCAGTGAATTCTACCAACAGTGTTCAAGATACTAACATCGGTGAGCTTCCAAAACCTTCAAATGCAAAACATGGATTGACAGAAGTAAGAACTAATGCAGTGGATTCTACCAAGAAGCTTGCATCAAGCAACACAGGAACTTGTGTGCAAGAAGGTAACACCGCTCATACTGCTAAACAAGTGTCAGAAGGTAATCTCTCTGAGCTGCCAACACCATCACATTTAAATGACGGATCAGCAGAAGTAGGAACTAATGCAGTGGGTTCTACCAAGAACGTTGAAGAAACTGCTACTCTGAAGCAAGTTTCAGAAGGTAATATAAATGAGCTGCTAAAACCTTCAGACTTAAAGGATGGATCACCAGAAGTAACTAGTGCAGTGGATTCTACCAAGAGTGTTCAAGATACTAACGTCGGTGAGCTCCCAAAACCTTCAAATGCAAAGGATGGATCGACAGAAGTAATAACTAATACAGTTGATTCTACCAAGCTTGCATCAAGCAACATGGAAAGTAATGTGCAAGAAGGTGTCACTGCTCATACTGCTCAACAAGTGTCAGAAGGTAGTCTCTCTGAGCTGCCGACACCATCACATTTAAATGACGGATCAGCAGAAGAAGGAACTAATGCAGTGGGTTCTACCAACAGTGTTGAAGAAACCGTAACTACTCTGAAGCAAGTTTCAGAAGGTAATATCAACAAGCTGCCAAAACCTTTAGACTTAAAGGATGGATCGACCAAAGTGCCTAATACAGTCAGTTCTACCAAGAGTGTTCAAGAAACTATCACTGTAAAAAAAGTTTCAGAAGGTAATGACGGTGAGCTTCAAAAACCTTCAAAGGATGGATCAACAGAAGTAGGAACTAATGTAGTTGATTCTACCAAGAAACTTGGAACTAGTGTACAAGAAAGTATCACTGCTCATACTGAAAATAAAGCTCAAGAAGGTGGTGTTGGTGAGCTTCCCAAATCATCAAATTTAAAGGATGAATTACCAAAAGTAGGATTTGATGCAGTCGGTTCCTCCAAGGACATTCCATCGAGCAACACAGAATCTGGCGTTCAAGAAAGTATCACTACTTCAGAAGGTGATGTTGCTGAGTTGCCAAGACCATCGAATTCGGATGGTCATGTTGGTGAGGTTCTAAAACCATCTATTTCAGAAGAAAGTAATGCGGGATTGACAAAACCAACAAATCCAAAGGAAAGTAATGCGGGTGAGTCGCAAAAACCACCAGATCCAAAGGAAAGTAATGCTGGTGAGTCGCAAAAAACACCAGAATCAAAAGGATGGTTATGGTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1551

Amino Acids

165.36

Weight (kDa)

4.69

Isoelectric Point (pI)

43.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1400, 2305
AccB7I CCANNNNNTGG 1 cut(s) 2492
AccBSI CCGCTC 1 cut(s) 3515
AccI GTMKAC 2 cut(s) 1329, 2336
AccII CGCG 1 cut(s) 792
AccIII TCCGGA 1 cut(s) 755
AciI CCGC 3 cut(s) 3513, 4526, 4565
AclI AACGTT 1 cut(s) 3627
AcuI CTGAAG 9 cut(s) 645, 1086, 1302, 1365, 2612, 3668, 3675, 4043, 4416
AcyI GRCGYC 1 cut(s) 1779
AfaI GTAC 8 cut(s) 645, 976, 1378, 1416, 1798, 2050, 3249, 4254
AfiI CCNNNNNNNGG 7 cut(s) 247, 422, 1723, 1724, 1863, 2492, 4352
AflIII ACRYGT 1 cut(s) 1411
AgeI ACCGGT 1 cut(s) 2161
AhlI ACTAGT 4 cut(s) 2045, 3218, 3722, 4247
AjnI CCWGG 5 cut(s) 421, 448, 602, 895, 3337
AloI GAACNNNNNNTCC 8 cut(s) 2388, 2420, 2550, 2582, 2655, 2687, 2937, 2969
Alw21I GWGCWC 1 cut(s) 3774
AlwNI CAGNNNCTG 4 cut(s) 1226, 2093, 2561, 4406
Aor13HI TCCGGA 1 cut(s) 755
AoxI GGCC 1 cut(s) 940
ArsI GACNNNNNNTTYG 4 cut(s) 2148, 2180, 2318, 2350
AseI ATTAAT 2 cut(s) 2388, 3063
AsiGI ACCGGT 1 cut(s) 2161
Asp700I GAANNNNTTC 1 cut(s) 856
AspLEI GCGC 1 cut(s) 792
AspS9I GGNCC 2 cut(s) 940, 1234
AsuC2I CCSGG 2 cut(s) 83, 944
AsuII TTCGAA 1 cut(s) 1562
AvaII GGWCC 1 cut(s) 1234
AxyI CCTNAGG 1 cut(s) 2436
BaeGI GKGCMC 1 cut(s) 2366
BaeI ACNNNNGTAYC 2 cut(s) 3747, 3780
BanI GGYRCC 2 cut(s) 1400, 2305
BanII GRGCYC 1 cut(s) 3774
BarI GAAGNNNNNNTAC 2 cut(s) 4414, 4446
BauI CACGAG 1 cut(s) 2791
BbsI GAAGAC 1 cut(s) 2789
Bbv12I GWGCWC 1 cut(s) 3774
BcgI CGANNNNNNTGC 2 cut(s) 4075, 4109
BciT130I CCWGG 5 cut(s) 423, 450, 604, 897, 3339
BciVI GTATCC 1 cut(s) 64
BclI TGATCA 2 cut(s) 1624, 2425
BcnI CCSGG 2 cut(s) 83, 944
BcuI ACTAGT 4 cut(s) 2045, 3218, 3722, 4247
BfaI CTAG 9 cut(s) 588, 708, 872, 1542, 2046, 2753, 3219, 3723, 4248
BfmI CTRYAG 3 cut(s) 1887, 2499, 2940
BfuI GTATCC 1 cut(s) 64
BglII AGATCT 4 cut(s) 619, 763, 868, 3107
BmcAI AGTACT 1 cut(s) 1798
Bme1390I CCNGG 7 cut(s) 83, 423, 450, 604, 897, 944, 3339
Bme18I GGWCC 1 cut(s) 1234
BmgT120I GGNCC 2 cut(s) 940, 1234
BmiI GGNNCC 8 cut(s) 239, 1002, 1197, 1402, 2260, 2307, 2350, 4372
BmrFI CCNGG 7 cut(s) 83, 423, 450, 604, 897, 944, 3339
BoxI GACNNNNGTC 2 cut(s) 539, 1542
BpiI GAAGAC 1 cut(s) 2789
BplI GAGNNNNNCTC 2 cut(s) 1805, 1837
Bpu14I TTCGAA 1 cut(s) 1562
BpuEI CTTGAG 3 cut(s) 488, 1726, 4275
BpuMI CCSGG 2 cut(s) 83, 944
BsaAI YACGTR 2 cut(s) 1418, 1649
BsaBI GATNNNNATC 2 cut(s) 873, 1182
BsaHI GRCGYC 1 cut(s) 1779
BsaI GGTCTC 2 cut(s) 625, 3006
BsaJI CCNNGG 7 cut(s) 82, 896, 2064, 2370, 2532, 2919, 4377
BsaWI WCCGGW 2 cut(s) 755, 2161
BsaXI ACNNNNNCTCC 6 cut(s) 501, 531, 972, 1002, 2962, 2992
Bsc4I CCNNNNNNNGG 7 cut(s) 247, 422, 1723, 1724, 1863, 2492, 4352
Bse118I RCCGGY 2 cut(s) 1458, 2161
Bse1I ACTGG 6 cut(s) 1199, 2098, 2152, 2665, 2953, 3261
Bse21I CCTNAGG 1 cut(s) 2436
Bse3DI GCAATG 4 cut(s) 1927, 2364, 2538, 2643
Bse8I GATNNNNATC 2 cut(s) 873, 1182
BseAI TCCGGA 1 cut(s) 755
BseBI CCWGG 5 cut(s) 423, 450, 604, 897, 3339
BseDI CCNNGG 7 cut(s) 82, 896, 2064, 2370, 2532, 2919, 4377
BseJI GATNNNNATC 2 cut(s) 873, 1182
BseLI CCNNNNNNNGG 7 cut(s) 247, 422, 1723, 1724, 1863, 2492, 4352
BseMI GCAATG 4 cut(s) 1927, 2364, 2538, 2643
BseNI ACTGG 6 cut(s) 1199, 2098, 2152, 2665, 2953, 3261
BseRI GAGGAG 3 cut(s) 105, 1598, 2577
BseSI GKGCMC 1 cut(s) 2366
BseYI CCCAGC 1 cut(s) 1219
BsgI GTGCAG 2 cut(s) 583, 3747
Bsh1236I CGCG 1 cut(s) 792
BshFI GGCC 1 cut(s) 942
BshNI GGYRCC 2 cut(s) 1400, 2305
BshTI ACCGGT 1 cut(s) 2161
BsiHKAI GWGCWC 1 cut(s) 3774
BsiSI CCGG 6 cut(s) 82, 756, 926, 943, 1459, 2162
BslFI GGGAC 3 cut(s) 224, 527, 1694
BslI CCNNNNNNNGG 7 cut(s) 247, 422, 1723, 1724, 1863, 2492, 4352
BsmFI GGGAC 3 cut(s) 224, 527, 1694
BsmI GAATGC 4 cut(s) 856, 964, 1176, 1457
BsnI GGCC 1 cut(s) 942
Bso31I GGTCTC 2 cut(s) 625, 3006
Bsp119I TTCGAA 1 cut(s) 1562
Bsp1286I GDGCHC 2 cut(s) 2366, 3774
Bsp13I TCCGGA 1 cut(s) 755
Bsp1407I TGTACA 2 cut(s) 3247, 4252
BspACI CCGC 3 cut(s) 3513, 4526, 4565
BspANI GGCC 1 cut(s) 942
BspEI TCCGGA 1 cut(s) 755
BspFNI CGCG 1 cut(s) 792
BspLI GGNNCC 8 cut(s) 239, 1002, 1197, 1402, 2260, 2307, 2350, 4372
BspMAI CTGCAG 1 cut(s) 1891
BspQI GCTCTTC 2 cut(s) 1146, 1469
BspT104I TTCGAA 1 cut(s) 1562
BspT107I GGYRCC 2 cut(s) 1400, 2305
BspTNI GGTCTC 2 cut(s) 625, 3006
BsrBI CCGCTC 1 cut(s) 3515
BsrDI GCAATG 4 cut(s) 1927, 2364, 2538, 2643
BsrFI RCCGGY 2 cut(s) 1458, 2161
BsrGI TGTACA 2 cut(s) 3247, 4252
BsrI ACTGG 6 cut(s) 1199, 2098, 2152, 2665, 2953, 3261
BssAI RCCGGY 2 cut(s) 1458, 2161
BssECI CCNNGG 7 cut(s) 82, 896, 2064, 2370, 2532, 2919, 4377
BssNI GRCGYC 1 cut(s) 1779
BssSI CACGAG 1 cut(s) 2791
BssT1I CCWWGG 5 cut(s) 2064, 2370, 2532, 2919, 4377
Bst2BI CACGAG 1 cut(s) 2791
Bst2UI CCWGG 5 cut(s) 423, 450, 604, 897, 3339
Bst6I CTCTTC 5 cut(s) 93, 1146, 1365, 1432, 1469
BstACI GRCGYC 1 cut(s) 1779
BstAUI TGTACA 2 cut(s) 3247, 4252
BstBAI YACGTR 2 cut(s) 1418, 1649
BstBI TTCGAA 1 cut(s) 1562
BstC8I GCNNGC 7 cut(s) 566, 570, 574, 964, 1578, 3471, 3843
BstFNI CGCG 1 cut(s) 792
BstHHI GCGC 1 cut(s) 792
BstMWI GCNNNNNNNGC 6 cut(s) 613, 922, 1843, 2762, 3521, 3893
BstNI CCWGG 5 cut(s) 423, 450, 604, 897, 3339
BstNSI RCATGY 2 cut(s) 572, 1415
BstPAI GACNNNNGTC 2 cut(s) 539, 1542
BstSCI CCNGG 7 cut(s) 81, 421, 448, 602, 895, 942, 3337
BstSFI CTRYAG 3 cut(s) 1887, 2499, 2940
BstSLI GKGCMC 1 cut(s) 2366
BstUI CGCG 1 cut(s) 792
BstV2I GAAGAC 1 cut(s) 2789
BstX2I RGATCY 9 cut(s) 619, 763, 868, 1441, 2495, 2558, 2663, 3107, 4588
BstXI CCANNNNNNTGG 1 cut(s) 2359
BstYI RGATCY 9 cut(s) 619, 763, 868, 1441, 2495, 2558, 2663, 3107, 4588
Bsu36I CCTNAGG 1 cut(s) 2436
BsuI GTATCC 1 cut(s) 64
BsuRI GGCC 1 cut(s) 942
BtgZI GCGATG 1 cut(s) 141
Cac8I GCNNGC 7 cut(s) 566, 570, 574, 964, 1578, 3471, 3843
CaiI CAGNNNCTG 4 cut(s) 1226, 2093, 2561, 4406
CfoI GCGC 1 cut(s) 792
Cfr10I RCCGGY 2 cut(s) 1458, 2161
Cfr13I GGNCC 2 cut(s) 940, 1234
CseI GACGC 1 cut(s) 1768
Csp6I GTAC 8 cut(s) 644, 975, 1377, 1415, 1797, 2049, 3248, 4253
CspAI ACCGGT 1 cut(s) 2161
CviQI GTAC 8 cut(s) 644, 975, 1377, 1415, 1797, 2049, 3248, 4253
DraI TTTAAA 3 cut(s) 3576, 3948, 4332
Eam1104I CTCTTC 5 cut(s) 93, 1146, 1365, 1432, 1469
EarI CTCTTC 5 cut(s) 93, 1146, 1365, 1432, 1469
Ecl136II GAGCTC 1 cut(s) 3772
Eco130I CCWWGG 5 cut(s) 2064, 2370, 2532, 2919, 4377
Eco24I GRGCYC 1 cut(s) 3774
Eco31I GGTCTC 2 cut(s) 625, 3006
Eco47I GGWCC 1 cut(s) 1234
Eco53kI GAGCTC 1 cut(s) 3772
Eco57I CTGAAG 9 cut(s) 645, 1086, 1302, 1365, 2612, 3668, 3675, 4043, 4416
Eco81I CCTNAGG 1 cut(s) 2436
EcoICRI GAGCTC 1 cut(s) 3772
EcoO109I RGGNCCY 1 cut(s) 1234
EcoRI GAATTC 3 cut(s) 3187, 3358, 4468
EcoRII CCWGG 5 cut(s) 421, 448, 602, 895, 3337
EcoT14I CCWWGG 5 cut(s) 2064, 2370, 2532, 2919, 4377
EcoT38I GRGCYC 1 cut(s) 3774
ErhI CCWWGG 5 cut(s) 2064, 2370, 2532, 2919, 4377
FalI AAGNNNNNCTT 4 cut(s) 844, 876, 2829, 2861
FaqI GGGAC 3 cut(s) 224, 527, 1694
FauI CCCGC 2 cut(s) 4519, 4558
FbaI TGATCA 2 cut(s) 1624, 2425
FblI GTMKAC 2 cut(s) 1329, 2336
FriOI GRGCYC 1 cut(s) 3774
FspBI CTAG 9 cut(s) 588, 708, 872, 1542, 2046, 2753, 3219, 3723, 4248
GlaI GCGC 1 cut(s) 791
GsaI CCCAGC 1 cut(s) 1223
HaeIII GGCC 1 cut(s) 942
HapII CCGG 6 cut(s) 82, 756, 926, 943, 1459, 2162
HgaI GACGC 1 cut(s) 1768
HhaI GCGC 1 cut(s) 792
Hin1I GRCGYC 1 cut(s) 1779
Hin6I GCGC 1 cut(s) 790
HinP1I GCGC 1 cut(s) 790
HincII GTYRAC 3 cut(s) 844, 2247, 2337
HindII GTYRAC 3 cut(s) 844, 2247, 2337
HindIII AAGCTT 4 cut(s) 828, 964, 3467, 3839
HpaII CCGG 6 cut(s) 82, 756, 926, 943, 1459, 2162
Hpy166II GTNNAC 7 cut(s) 183, 844, 1330, 2247, 2337, 2569, 4253
Hpy8I GTNNAC 7 cut(s) 183, 844, 1330, 2247, 2337, 2569, 4253
Hpy99I CGWCG 2 cut(s) 3187, 3767
HpyCH4IV ACGT 7 cut(s) 892, 1417, 1648, 2505, 3182, 3627, 3762
HpyF10VI GCNNNNNNNGC 6 cut(s) 613, 922, 1843, 2762, 3521, 3893
HpySE526I ACGT 7 cut(s) 892, 1417, 1648, 2505, 3182, 3627, 3762
Hsp92I GRCGYC 1 cut(s) 1779
HspAI GCGC 1 cut(s) 790
Kpn2I TCCGGA 1 cut(s) 755
Ksp22I TGATCA 2 cut(s) 1624, 2425
LguI GCTCTTC 2 cut(s) 1146, 1469
LmnI GCTCC 6 cut(s) 226, 436, 1195, 1813, 2437, 3777
MaeI CTAG 9 cut(s) 588, 708, 872, 1542, 2046, 2753, 3219, 3723, 4248
MaeII ACGT 7 cut(s) 892, 1417, 1648, 2505, 3182, 3627, 3762
MaeIII GTNAC 9 cut(s) 1288, 2164, 2416, 3127, 3343, 3506, 3718, 3880, 4012
MbiI CCGCTC 1 cut(s) 3515
MflI RGATCY 9 cut(s) 619, 763, 868, 1441, 2495, 2558, 2663, 3107, 4588
MhlI GDGCHC 2 cut(s) 2366, 3774
MlyI GAGTC 8 cut(s) 65, 752, 1532, 1673, 1716, 2803, 4580, 4622
MmeI TCCRAC 4 cut(s) 1684, 1807, 2488, 2989
MroI TCCGGA 1 cut(s) 755
MroXI GAANNNNTTC 1 cut(s) 856
MslI CAYNNNNRTG 6 cut(s) 559, 1416, 1485, 3576, 3948, 4485
MspI CCGG 6 cut(s) 82, 756, 926, 943, 1459, 2162
MspR9I CCNGG 7 cut(s) 83, 423, 450, 604, 897, 944, 3339
Mva1269I GAATGC 4 cut(s) 856, 964, 1176, 1457
MvaI CCWGG 5 cut(s) 423, 450, 604, 897, 3339
MvnI CGCG 1 cut(s) 792
MwoI GCNNNNNNNGC 6 cut(s) 613, 922, 1843, 2762, 3521, 3893
NciI CCSGG 2 cut(s) 83, 944
NlaIV GGNNCC 8 cut(s) 239, 1002, 1197, 1402, 2260, 2307, 2350, 4372
NmuCI GTSAC 2 cut(s) 2164, 3880
NspI RCATGY 2 cut(s) 572, 1415
NspV TTCGAA 1 cut(s) 1562
PaeI GCATGC 1 cut(s) 572
PciI ACATGT 1 cut(s) 1411
PciSI GCTCTTC 2 cut(s) 1146, 1469
PctI GAATGC 4 cut(s) 856, 964, 1176, 1457
PdmI GAANNNNTTC 1 cut(s) 856
PflMI CCANNNNNTGG 1 cut(s) 2492
PinAI ACCGGT 1 cut(s) 2161
PleI GAGTC 8 cut(s) 64, 751, 1532, 1672, 1715, 2802, 4579, 4621
PpsI GAGTC 8 cut(s) 64, 751, 1532, 1672, 1715, 2802, 4579, 4621
Ppu21I YACGTR 2 cut(s) 1418, 1649
PpuMI RGGWCCY 1 cut(s) 1234
PscI ACATGT 1 cut(s) 1411
PshAI GACNNNNGTC 2 cut(s) 539, 1542
PshBI ATTAAT 2 cut(s) 2388, 3063
Psp124BI GAGCTC 1 cut(s) 3774
Psp1406I AACGTT 1 cut(s) 3627
Psp5II RGGWCCY 1 cut(s) 1234
Psp6I CCWGG 5 cut(s) 421, 448, 602, 895, 3337
PspFI CCCAGC 1 cut(s) 1219
PspGI CCWGG 5 cut(s) 421, 448, 602, 895, 3337
PspN4I GGNNCC 8 cut(s) 239, 1002, 1197, 1402, 2260, 2307, 2350, 4372
PspPI GGNCC 2 cut(s) 940, 1234
PspPPI RGGWCCY 1 cut(s) 1234
PsrI GAACNNNNNNTAC 2 cut(s) 2041, 2073
PstI CTGCAG 1 cut(s) 1891
PstNI CAGNNNCTG 4 cut(s) 1226, 2093, 2561, 4406
PsuI RGATCY 9 cut(s) 619, 763, 868, 1441, 2495, 2558, 2663, 3107, 4588
RsaI GTAC 8 cut(s) 645, 976, 1378, 1416, 1798, 2050, 3249, 4254
RsaNI GTAC 8 cut(s) 644, 975, 1377, 1415, 1797, 2049, 3248, 4253
RseI CAYNNNNRTG 6 cut(s) 559, 1416, 1485, 3576, 3948, 4485
SacI GAGCTC 1 cut(s) 3774
SalI GTCGAC 1 cut(s) 2335
SapI GCTCTTC 2 cut(s) 1146, 1469
Sau96I GGNCC 2 cut(s) 940, 1234
ScaI AGTACT 1 cut(s) 1798
SchI GAGTC 8 cut(s) 65, 752, 1532, 1673, 1716, 2803, 4580, 4622
ScrFI CCNGG 7 cut(s) 83, 423, 450, 604, 897, 944, 3339
SduI GDGCHC 2 cut(s) 2366, 3774
SfcI CTRYAG 3 cut(s) 1887, 2499, 2940
SfuI TTCGAA 1 cut(s) 1562
SinI GGWCC 1 cut(s) 1234
SmiI ATTTAAAT 2 cut(s) 3576, 3948
SmiMI CAYNNNNRTG 6 cut(s) 559, 1416, 1485, 3576, 3948, 4485
SmlI CTYRAG 3 cut(s) 503, 1741, 4290
SmoI CTYRAG 3 cut(s) 503, 1741, 4290
SpeI ACTAGT 4 cut(s) 2045, 3218, 3722, 4247
SphI GCATGC 1 cut(s) 572
SsiI CCGC 3 cut(s) 3513, 4526, 4565
SspMI CTAG 9 cut(s) 588, 708, 872, 1542, 2046, 2753, 3219, 3723, 4248
SstI GAGCTC 1 cut(s) 3774
StyD4I CCNGG 7 cut(s) 81, 421, 448, 602, 895, 942, 3337
StyI CCWWGG 5 cut(s) 2064, 2370, 2532, 2919, 4377
SwaI ATTTAAAT 2 cut(s) 3576, 3948
TaiI ACGT 7 cut(s) 895, 1420, 1651, 2508, 3185, 3630, 3765
TatI WGTACW 4 cut(s) 1796, 2048, 3247, 4252
TseFI GTSAC 2 cut(s) 2164, 3880
Tsp45I GTSAC 2 cut(s) 2164, 3880
TspGWI ACGGA 3 cut(s) 1315, 3597, 3969
Van91I CCANNNNNTGG 1 cut(s) 2492
VpaK11BI GGWCC 1 cut(s) 1234
VspI ATTAAT 2 cut(s) 2388, 3063
XbaI TCTAGA 1 cut(s) 871
XceI RCATGY 2 cut(s) 572, 1415
XcmI CCANNNNNNNNNTGG 1 cut(s) 3268
XmiI GTMKAC 2 cut(s) 1329, 2336
XmnI GAANNNNTTC 1 cut(s) 856
XspI CTAG 9 cut(s) 588, 708, 872, 1542, 2046, 2753, 3219, 3723, 4248
ZrmI AGTACT 1 cut(s) 1798
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.