Rh3AG321400

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
Physical Location & Seq
Forward (+)
44716233 .. 44720601
4369 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG321400.1

Sequence Viewer

Length: 3708 bp
ATGGGGGGTTTAGTGTTGGAAATTGGAAGTCAAATCAGCAAGTTTGTGATGATATCAGTGAAAACATGTTATAAATCAGTTGGCAATCATCCATTTGTTGTGGGCATCCTGCTTTTCCTTCTATTTCTGCACAGATCATTTCCTGTTTTGTTTTCTGTTTTGGTGTCATCATCCCCTGTTCTAGTCTGCACTGCTGTTCTTCTTGGAACCCTTTTAAGTTTTGGCCAATCCCACATACCCGAAATTGAACGCCAAGACCATATTGCTTCGCTTAGAGCCAGGGTTCCAGGCGATGACACTGTTGTTCTTGAGAGGGGTGGCAGCTTTTCCACAGAGAAATTCTCTGCGAGCAGGGATGTTGTCGACGCCGTGGCCCTTGAAGAAGCCGGCTCGACAGATTACACAGTCAATGATGAGGTTGGCGCGCCGCTTATTAATCAGAATGTGCAGCAGACTCAGAGTGACGAGAGAGTGGTTGAGGATGTGGACAGAGACATAGAGTTGGAAAATCAGGGCTTGCCAAATGATGTGCAAGCAGTTGAGCAGCAGTATACTTTGCTTCAAAAGGTTCAAGATCAGATTCTCCAAGTGCACGATGATAATGTGTCTCCCCGAGGAGGAGGAGAACACTTGGATTCCTTTCTGGGTGGCTACGGTCATGATGACAGTGGTGATGCTTCTGATTCTGGGTCGGATGGGGCTGAGAGCTCGTCGCCAGATGCTTCAATGGCTGACATCCTTCCAATTCTTGATGAGCTACACCCACTTTTAGACTCAGAAGCTCCACAGCCTGCTCGTATGTTGCATGATGGCTCTGATGCAGCTTCAGATAGTAGTGTTGAGTCGGACCAGGGTGGACAAGTAGATGAGGATGATGGGGTTGATTACAATGGCGGAGATGAGGAAGAAGTACTGGCACACGGTGGCACAGATGATGAAAGCAAATCTGCAATTAAGTGGACAGATGATGACCAAAAGAATCTCATGGATTTGGGAAATTTGGAGCTTGAAAGGAACCAACGCTTGGAGAGTCTTATTGCAAGGAGAAGGGCAAGAAAAAGCTTCAAATTAACGGCTGAGAAGAATCTAATAGATTTTGATGGTGTTGATCTTCCCTTTAATGTTTCACCAATATCAACAACAAGGCGCAACCCATTCGATTCTCCATTTGATGACTCCTATGGCAACATGCCCATCCCTGGTTCTGCTCCATCCATTATGTTGGCAAGGAGAAATCCTTTTGATCTTCCTTATGACTCCAATGAAGAAAAACCTGACCTTAAGGGAGACCATTTCGAGCAAGAGTTTATTGCATCGCATGCCAACGATGCATTCTTCCGTAGGCATGAAAGCTTCAGTTTGGGAGCTTCAAGCTTGGGGGGTGCCAAGCACGAGAGGCAAGAATTTAAGTGGAAACCTGTTTTCGTACCAGAAAGATTGGCTTCAGAAGGGACAGGTTACTCCTCATTTCAAAGACAATCAAGTGAAGTTAGTGAATCAAAGTTGAGTTCTGTTCCTGATAGTGACTCGGTGAGTTCTGTAGCAGATTTGGATGATAGGAAGTTCAGTGAGCAAGACTTTACTAAAGAAACGGAAGTTATCTCCAACATTTATCATGCATCTGGTCTTGTTGACCATGGAAGTCATTCCTATGAAGACGTATATTCCCTGGAAATGGAACAGGCTGACAAAAGGGATGTCCTACACAATGGGCTTGATATAGAATTGGGTAAAAGGGAAAATCTGGAACCAAGCTTGTTGGATAATGGAGGCTTACCTACTGTTGTTACTAATGAACTCCATCTGAATCCAGAATTAGTTGAAGAGGAGGACAGCAGCAGTAGGTCAAGCTTGTCATCATTGTCCGAAGCAGATGAAAAAATTTCAGACGTGAGGAAGGGTGAAAAAAGTTTGGACCCAAGTGGTGATCTCAACAAGGAGTTTCTAATTTCACCGCAACATTCACTTGAGGAGTCAAATGTTCAATTCATGAGCACGACAGCTGATGAAAATCAATTTAAGGAGCCAGTCTATGACTCAACTCCCCTTGACGCAGAAAACCTCATTTCCTTGAACTCCATTTCTTCTGATATGCAAGCAGAGATATCTGAACTAGTTAGACCTCAAGCATCAGCGGAAATGTATGAGTCTTTTATGTACAAGGATGATGTGGACGGTGAGAAAATAGAGAAGGCTATTTCAGGTGATGAAGAGATATGTGGTGCCACCTCAAAAGCGCATGAACCAGATGCAATTGAGGGAGACTTGGGAAACTACAACCAACCCCAGCTAACATCTTCTGTTTCAGAGGTAGAAATCAATCTCCCAAGGAATTTGGAGGTGAATGCAGCTTCTTCAGAATCTAGTTACCACTTTCTTCTTTCCAATGAACAGACATCAGAACAGGAGAAAGACCTATCCTGGTTGGATAAATCCATGGTTGAACCATGTCTTGGTGATCATTTGGAAGCTCTTGTTATTGAAGATACTGTCAAGGAAGAGGTGGACGACATAAAGGAGATTGATGCAGAGTTGTTATCAGAATTGGATACAGTTGGAGATTTCAGTGTGAAAGAAGTTGTTGGTGAGCCACTCCATTATGAGTTGATAACAGAGGAAGCTAATGCTGTGAGCACTGAATCTGGGTTGTCGACGGCGGATCCAAACCTGTTAGAGCCCTTCCAGGAGCTACCTGTTCTTGAGCACACTCAGGAGGTAGTAGATGTTGATGGGACTTTCAAACAAATTCATGAGGGAGTCAATGTTGAGGAGGTCATGTGTCCTAGCGTGGTTGACAATGAGCTAGAGGTAGTGTCAAAAAGTACAGTGCAGGCCAGTTCACAGTTGCTAACAGTTGAAGCAACATCTTTGGAAGATATTATTACTTCTTCAAATCAAGCTCTAGACAGTTCTGTTAATGAGTTTCCACAACTATTGGATACAGAGGGGTCAGCAGAATTACATCTGGAATTACCTGCAGAGGGTAATGAGGTATCAGCAGATGTCTTGCCTGATGCAGAGGAGGAGATCGCATCAGGCAATATAGGATCCAGTGTTCAAGAAACTTTCACTACGCATATTCCTTTGAAGCAACTATCAGAAGGTAATGTTGCTGAGCTGCCAAATCCATCAAATTCAAAGGACGTATTGGCAGAAGTAGGAACTGAGGCTGTGGTGGAGATTGTATCAAGCAATGTTGTATATGGTGTTGAAGAAACTGTCACTGATTCTCCTTTGAAGCAACTATCAGAAGGTAATGTTGCTGAGCTGCCAAATCCATCGAATTCAAAGGATGTATTGGCAGAAGTAGGAACTGAGGCTGTGGTGGAGATTGGATCAAGCAATGTTGTTTATGGTGTTGAAGAAACTATCAGTGATTCTCCTTTGAAGCAAGTCTCGGAAGATGATGTCCGTGAGCTGCCAAAACCATCGAATTCAAAGGATGGATGTGAAGAAGTAAGAACTATGGTGGGGGATTCTATAGACGAGATTGGATCGAACAATACAGGATCTGGTGTTCAAGAAACTATCCCTACTCATAGTGCGTTGAAGCAAGTCTCGGAAAGTATTGTGGATGACTCCATAGAGATTGCATCAGGCAATAGAGAAGTTGTGCAAGAACCTATACCTACTCAAGTTTCAGAAAAGAATGTTGGTGTTGGTGAGCTGCCAAAACCATCTGATTCAAATGATGGATTAGCAGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1235

Amino Acids

134.15

Weight (kDa)

4.18

Isoelectric Point (pI)

49.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 72
Acc36I ACCTGC 1 cut(s) 2983
AccB1I GGYRCC 2 cut(s) 1382, 2222
AccB7I CCANNNNNTGG 2 cut(s) 1024, 2453
AccI GTMKAC 3 cut(s) 363, 551, 2651
AccII CGCG 1 cut(s) 425
AciI CCGC 5 cut(s) 428, 894, 1955, 2135, 2657
AclWI GGATC 7 cut(s) 2654, 2667, 3042, 3055, 3343, 3502, 3517
AcoI YGGCCR 1 cut(s) 223
AcsI RAATTY 9 cut(s) 338, 997, 1403, 1881, 2332, 2745, 3133, 3283, 3433
AcuI CTGAAG 4 cut(s) 810, 1339, 1428, 2340
AcyI GRCGYC 1 cut(s) 366
AdeI CACNNNGTG 1 cut(s) 923
AfaI GTAC 4 cut(s) 912, 1428, 2159, 2824
AfiI CCNNNNNNNGG 6 cut(s) 617, 1024, 1199, 1675, 2453, 2981
AflII CTTAAG 1 cut(s) 1280
AflIII ACRYGT 1 cut(s) 65
AhlI ACTAGT 1 cut(s) 2113
AjiI CACGTC 1 cut(s) 1891
AjnI CCWGG 7 cut(s) 278, 286, 849, 1198, 1668, 2420, 2682
AjuI GAANNNNNNNTTGG 8 cut(s) 1007, 1039, 1316, 1348, 2436, 2468, 3636, 3668
AloI GAACNNNNNNTCC 4 cut(s) 3039, 3071, 3501, 3533
Alw21I GWGCWC 5 cut(s) 594, 710, 1997, 2636, 2706
Alw26I GTCTC 6 cut(s) 486, 612, 1281, 2256, 3400, 3562
Alw44I GTGCAC 1 cut(s) 590
AlwI GGATC 7 cut(s) 2654, 2667, 3042, 3055, 3343, 3502, 3517
AlwNI CAGNNNCTG 1 cut(s) 3512
Ama87I CYCGRG 1 cut(s) 612
AoxI GGCC 3 cut(s) 223, 372, 2832
ApaLI GTGCAC 1 cut(s) 590
ApoI RAATTY 9 cut(s) 338, 997, 1403, 1881, 2332, 2745, 3133, 3283, 3433
ArsI GACNNNNNNTTYG 2 cut(s) 1683, 1715
AscI GGCGCGCC 1 cut(s) 423
AseI ATTAAT 1 cut(s) 435
Asp700I GAANNNNTTC 1 cut(s) 1645
AspLEI GCGC 4 cut(s) 425, 427, 1149, 2239
AspS9I GGNCC 3 cut(s) 373, 847, 1915
AvaI CYCGRG 1 cut(s) 612
AvaII GGWCC 2 cut(s) 847, 1915
BaeGI GKGCMC 1 cut(s) 594
BalI TGGCCA 1 cut(s) 225
BamHI GGATCC 2 cut(s) 2659, 3047
BanI GGYRCC 2 cut(s) 1382, 2222
BanII GRGCYC 2 cut(s) 710, 2679
BauI CACGAG 1 cut(s) 1391
BbsI GAAGAC 1 cut(s) 1662
Bbv12I GWGCWC 5 cut(s) 594, 710, 1997, 2636, 2706
BceAI ACGGC 3 cut(s) 353, 1089, 2670
BcgI CGANNNNNNTGC 2 cut(s) 1138, 1172
BciT130I CCWGG 7 cut(s) 280, 288, 851, 1200, 1670, 2422, 2684
BciVI GTATCC 2 cut(s) 2542, 2932
BclI TGATCA 1 cut(s) 2458
BcoDI GTCTC 6 cut(s) 486, 612, 1281, 2256, 3400, 3562
BcuI ACTAGT 1 cut(s) 2113
BfaI CTAG 6 cut(s) 182, 2114, 2364, 2784, 2804, 2903
BfmI CTRYAG 3 cut(s) 1539, 2976, 3480
BfrI CTTAAG 1 cut(s) 1280
BfuAI ACCTGC 1 cut(s) 2983
BfuI GTATCC 2 cut(s) 2542, 2932
BlpI GCTNAGC 2 cut(s) 3114, 3264
BmcAI AGTACT 1 cut(s) 912
Bme1390I CCNGG 7 cut(s) 280, 288, 851, 1200, 1670, 2422, 2684
Bme18I GGWCC 2 cut(s) 847, 1915
BmeT110I CYCGRG 1 cut(s) 612
BmgBI CACGTC 1 cut(s) 1891
BmgT120I GGNCC 3 cut(s) 373, 847, 1915
BmrFI CCNGG 7 cut(s) 280, 288, 851, 1200, 1670, 2422, 2684
BpiI GAAGAC 1 cut(s) 1662
BplI GAGNNNNNCTC 2 cut(s) 326, 358
Bpu1102I GCTNAGC 2 cut(s) 3114, 3264
BpuEI CTTGAG 5 cut(s) 329, 1988, 2109, 2720, 3618
BsaBI GATNNNNATC 1 cut(s) 2010
BsaHI GRCGYC 1 cut(s) 366
BsaI GGTCTC 1 cut(s) 1281
BsaJI CCNNGG 9 cut(s) 279, 369, 613, 850, 1198, 1636, 1668, 2327, 2436
BsaXI ACNNNNNCTCC 6 cut(s) 2748, 2762, 2778, 2792, 3214, 3244
Bsc4I CCNNNNNNNGG 6 cut(s) 617, 1024, 1199, 1675, 2453, 2981
Bse118I RCCGGY 1 cut(s) 386
Bse1I ACTGG 4 cut(s) 918, 2027, 2835, 3051
Bse3DI GCAATG 2 cut(s) 3199, 3349
Bse8I GATNNNNATC 1 cut(s) 2010
BseBI CCWGG 7 cut(s) 280, 288, 851, 1200, 1670, 2422, 2684
BseDI CCNNGG 9 cut(s) 279, 369, 613, 850, 1198, 1636, 1668, 2327, 2436
BseJI GATNNNNATC 1 cut(s) 2010
BseLI CCNNNNNNNGG 6 cut(s) 617, 1024, 1199, 1675, 2453, 2981
BseMI GCAATG 2 cut(s) 3199, 3349
BseMII CTCAG 9 cut(s) 470, 693, 789, 1068, 2723, 3105, 3156, 3255, 3306
BseNI ACTGG 4 cut(s) 918, 2027, 2835, 3051
BsePI GCGCGC 1 cut(s) 423
BseRI GAGGAG 9 cut(s) 630, 633, 636, 1453, 1841, 1985, 2783, 3035, 3038
BseSI GKGCMC 1 cut(s) 594
BseYI CCCAGC 1 cut(s) 2286
BsgI GTGCAG 4 cut(s) 113, 172, 467, 2849
Bsh1236I CGCG 1 cut(s) 425
BshFI GGCC 3 cut(s) 225, 374, 2834
BshNI GGYRCC 2 cut(s) 1382, 2222
BsiHKAI GWGCWC 5 cut(s) 594, 710, 1997, 2636, 2706
BsiHKCI CYCGRG 1 cut(s) 612
BsiSI CCGG 1 cut(s) 387
BslFI GGGAC 2 cut(s) 1465, 2746
BslI CCNNNNNNNGG 6 cut(s) 617, 1024, 1199, 1675, 2453, 2981
BsmAI GTCTC 6 cut(s) 486, 612, 1281, 2256, 3400, 3562
BsmFI GGGAC 2 cut(s) 1465, 2746
BsmI GAATGC 2 cut(s) 1331, 2350
BsnI GGCC 3 cut(s) 225, 374, 2834
Bso31I GGTCTC 1 cut(s) 1281
BsoBI CYCGRG 1 cut(s) 612
Bsp1286I GDGCHC 6 cut(s) 594, 710, 1997, 2636, 2679, 2706
Bsp1407I TGTACA 1 cut(s) 2157
Bsp1720I GCTNAGC 2 cut(s) 3114, 3264
Bsp19I CCATGG 2 cut(s) 1636, 2436
BspACI CCGC 5 cut(s) 428, 894, 1955, 2135, 2657
BspANI GGCC 3 cut(s) 225, 374, 2834
BspCNI CTCAG 9 cut(s) 469, 694, 788, 1069, 2722, 3106, 3157, 3256, 3307
BspFNI CGCG 1 cut(s) 425
BspHI TCATGA 3 cut(s) 658, 1989, 2749
BspMAI CTGCAG 1 cut(s) 2980
BspMI ACCTGC 1 cut(s) 2983
BspPI GGATC 7 cut(s) 2654, 2667, 3042, 3055, 3343, 3502, 3517
BspT107I GGYRCC 2 cut(s) 1382, 2222
BspTI CTTAAG 1 cut(s) 1280
BspTNI GGTCTC 1 cut(s) 1281
BsrDI GCAATG 2 cut(s) 3199, 3349
BsrFI RCCGGY 1 cut(s) 386
BsrGI TGTACA 1 cut(s) 2157
BsrI ACTGG 4 cut(s) 918, 2027, 2835, 3051
BssAI RCCGGY 1 cut(s) 386
BssECI CCNNGG 9 cut(s) 279, 369, 613, 850, 1198, 1636, 1668, 2327, 2436
BssHII GCGCGC 1 cut(s) 423
BssNAI GTATAC 1 cut(s) 552
BssNI GRCGYC 1 cut(s) 366
BssSI CACGAG 1 cut(s) 1391
BssT1I CCWWGG 3 cut(s) 1636, 2327, 2436
Bst1107I GTATAC 1 cut(s) 552
Bst2BI CACGAG 1 cut(s) 1391
Bst2UI CCWGG 7 cut(s) 280, 288, 851, 1200, 1670, 2422, 2684
Bst6I CTCTTC 3 cut(s) 1818, 2205, 2493
BstACI GRCGYC 1 cut(s) 366
BstAFI CTTAAG 1 cut(s) 1280
BstAPI GCANNNNNTGC 1 cut(s) 1319
BstAUI TGTACA 1 cut(s) 2157
BstC8I GCNNGC 9 cut(s) 349, 388, 425, 518, 534, 792, 1320, 2097, 2832
BstDSI CCRYGG 3 cut(s) 369, 1636, 2436
BstFNI CGCG 1 cut(s) 425
BstHHI GCGC 4 cut(s) 425, 427, 1149, 2239
BstMAI GTCTC 6 cut(s) 486, 612, 1281, 2256, 3400, 3562
BstMWI GCNNNNNNNGC 4 cut(s) 728, 1319, 1328, 1396
BstNI CCWGG 7 cut(s) 280, 288, 851, 1200, 1670, 2422, 2684
BstNSI RCATGY 3 cut(s) 69, 1192, 1322
BstSCI CCNGG 7 cut(s) 278, 286, 849, 1198, 1668, 2420, 2682
BstSFI CTRYAG 3 cut(s) 1539, 2976, 3480
BstSLI GKGCMC 1 cut(s) 594
BstUI CGCG 1 cut(s) 425
BstV2I GAAGAC 1 cut(s) 1662
BstX2I RGATCY 3 cut(s) 2659, 3047, 3509
BstXI CCANNNNNNTGG 1 cut(s) 1222
BstYI RGATCY 3 cut(s) 2659, 3047, 3509
BstZ17I GTATAC 1 cut(s) 552
BsuI GTATCC 2 cut(s) 2542, 2932
BsuRI GGCC 3 cut(s) 225, 374, 2834
BtgI CCRYGG 3 cut(s) 369, 1636, 2436
BtgZI GCGATG 2 cut(s) 306, 1299
BtrI CACGTC 1 cut(s) 1891
BtsI GCAGTG 1 cut(s) 189
BveI ACCTGC 1 cut(s) 2983
Cac8I GCNNGC 9 cut(s) 349, 388, 425, 518, 534, 792, 1320, 2097, 2832
CaiI CAGNNNCTG 1 cut(s) 3512
CciI TCATGA 3 cut(s) 658, 1989, 2749
CfoI GCGC 4 cut(s) 425, 427, 1149, 2239
Cfr10I RCCGGY 1 cut(s) 386
Cfr13I GGNCC 3 cut(s) 373, 847, 1915
CseI GACGC 2 cut(s) 374, 2060
Csp6I GTAC 4 cut(s) 911, 1427, 2158, 2823
CspCI CAANNNNNGTGG 2 cut(s) 2916, 2951
CviQI GTAC 4 cut(s) 911, 1427, 2158, 2823
DraIII CACNNNGTG 1 cut(s) 923
EaeI YGGCCR 1 cut(s) 223
Eam1104I CTCTTC 3 cut(s) 1818, 2205, 2493
EarI CTCTTC 3 cut(s) 1818, 2205, 2493
EciI GGCGGA 2 cut(s) 909, 2672
Ecl136II GAGCTC 1 cut(s) 708
Eco130I CCWWGG 3 cut(s) 1636, 2327, 2436
Eco24I GRGCYC 2 cut(s) 710, 2679
Eco31I GGTCTC 1 cut(s) 1281
Eco32I GATATC 2 cut(s) 54, 2106
Eco47I GGWCC 2 cut(s) 847, 1915
Eco53kI GAGCTC 1 cut(s) 708
Eco57I CTGAAG 4 cut(s) 810, 1339, 1428, 2340
Eco88I CYCGRG 1 cut(s) 612
EcoICRI GAGCTC 1 cut(s) 708
EcoRI GAATTC 2 cut(s) 3283, 3433
EcoRII CCWGG 7 cut(s) 278, 286, 849, 1198, 1668, 2420, 2682
EcoRV GATATC 2 cut(s) 54, 2106
EcoT14I CCWWGG 3 cut(s) 1636, 2327, 2436
EcoT22I ATGCAT 2 cut(s) 1333, 1621
EcoT38I GRGCYC 2 cut(s) 710, 2679
ErhI CCWWGG 3 cut(s) 1636, 2327, 2436
FalI AAGNNNNNCTT 2 cut(s) 1426, 1458
FaqI GGGAC 2 cut(s) 1465, 2746
FbaI TGATCA 1 cut(s) 2458
FblI GTMKAC 3 cut(s) 363, 551, 2651
FriOI GRGCYC 2 cut(s) 710, 2679
FspBI CTAG 6 cut(s) 182, 2114, 2364, 2784, 2804, 2903
GlaI GCGC 4 cut(s) 424, 426, 1148, 2238
GsaI CCCAGC 1 cut(s) 2290
HaeIII GGCC 3 cut(s) 225, 374, 2834
HapII CCGG 1 cut(s) 387
HgaI GACGC 2 cut(s) 374, 2060
HhaI GCGC 4 cut(s) 425, 427, 1149, 2239
Hin1I GRCGYC 1 cut(s) 366
Hin6I GCGC 4 cut(s) 423, 425, 1147, 2237
HinP1I GCGC 4 cut(s) 423, 425, 1147, 2237
HincII GTYRAC 4 cut(s) 364, 1633, 2652, 2794
HindII GTYRAC 4 cut(s) 364, 1633, 2652, 2794
HindIII AAGCTT 5 cut(s) 1060, 1351, 1372, 1753, 1849
HpaII CCGG 1 cut(s) 387
Hpy99I CGWCG 3 cut(s) 368, 715, 2656
HpyAV CCTTC 9 cut(s) 128, 749, 1041, 1442, 1891, 2185, 2689, 3095, 3245
HpyCH4IV ACGT 3 cut(s) 1659, 1890, 3144
HpyF10VI GCNNNNNNNGC 4 cut(s) 728, 1319, 1328, 1396
HpySE526I ACGT 3 cut(s) 1659, 1890, 3144
Hsp92I GRCGYC 1 cut(s) 366
HspAI GCGC 4 cut(s) 423, 425, 1147, 2237
KroI GCCGGC 1 cut(s) 386
KroNI GCCGGC 1 cut(s) 388
Ksp22I TGATCA 1 cut(s) 2458
LmnI GCTCC 6 cut(s) 787, 1003, 1213, 1364, 2023, 2686
MaeI CTAG 6 cut(s) 182, 2114, 2364, 2784, 2804, 2903
MaeII ACGT 3 cut(s) 1659, 1890, 3144
MaeIII GTNAC 6 cut(s) 461, 1457, 1523, 1786, 2366, 3220
MfeI CAATTG 1 cut(s) 2253
MflI RGATCY 3 cut(s) 2659, 3047, 3509
MhlI GDGCHC 6 cut(s) 594, 710, 1997, 2636, 2679, 2706
MlsI TGGCCA 1 cut(s) 225
MluNI TGGCCA 1 cut(s) 225
MmeI TCCRAC 7 cut(s) 483, 672, 825, 1629, 1740, 2406, 2536
Mox20I TGGCCA 1 cut(s) 225
Mph1103I ATGCAT 2 cut(s) 1333, 1621
MroNI GCCGGC 1 cut(s) 386
MroXI GAANNNNTTC 1 cut(s) 1645
MscI TGGCCA 1 cut(s) 225
MseI TTAA 9 cut(s) 215, 435, 954, 1070, 1119, 1281, 1407, 2019, 2916
MslI CAYNNNNRTG 1 cut(s) 1650
Msp20I TGGCCA 1 cut(s) 225
MspA1I CMGCKG 2 cut(s) 2003, 2135
MspCI CTTAAG 1 cut(s) 1280
MspI CCGG 1 cut(s) 387
MspR9I CCNGG 7 cut(s) 280, 288, 851, 1200, 1670, 2422, 2684
MunI CAATTG 1 cut(s) 2253
Mva1269I GAATGC 2 cut(s) 1331, 2350
MvaI CCWGG 7 cut(s) 280, 288, 851, 1200, 1670, 2422, 2684
MvnI CGCG 1 cut(s) 425
MwoI GCNNNNNNNGC 4 cut(s) 728, 1319, 1328, 1396
NaeI GCCGGC 1 cut(s) 388
NcoI CCATGG 2 cut(s) 1636, 2436
NgoMIV GCCGGC 1 cut(s) 386
NmuCI GTSAC 3 cut(s) 461, 1523, 3220
NsiI ATGCAT 2 cut(s) 1333, 1621
NspI RCATGY 3 cut(s) 69, 1192, 1322
PaeI GCATGC 1 cut(s) 1322
PagI TCATGA 3 cut(s) 658, 1989, 2749
PalAI GGCGCGCC 1 cut(s) 423
PauI GCGCGC 1 cut(s) 423
PciI ACATGT 1 cut(s) 65
PctI GAATGC 2 cut(s) 1331, 2350
PdiI GCCGGC 1 cut(s) 388
PdmI GAANNNNTTC 1 cut(s) 1645
PflMI CCANNNNNTGG 2 cut(s) 1024, 2453
PfoI TCCNGGA 1 cut(s) 2682
PscI ACATGT 1 cut(s) 65
PshBI ATTAAT 1 cut(s) 435
PsiI TTATAA 1 cut(s) 72
Psp124BI GAGCTC 1 cut(s) 710
Psp6I CCWGG 7 cut(s) 278, 286, 849, 1198, 1668, 2420, 2682
PspFI CCCAGC 1 cut(s) 2286
PspGI CCWGG 7 cut(s) 278, 286, 849, 1198, 1668, 2420, 2682
PspPI GGNCC 3 cut(s) 373, 847, 1915
PstI CTGCAG 1 cut(s) 2980
PstNI CAGNNNCTG 1 cut(s) 3512
PsuI RGATCY 3 cut(s) 2659, 3047, 3509
PteI GCGCGC 1 cut(s) 423
PvuII CAGCTG 1 cut(s) 2003
RsaI GTAC 4 cut(s) 912, 1428, 2159, 2824
RsaNI GTAC 4 cut(s) 911, 1427, 2158, 2823
RseI CAYNNNNRTG 1 cut(s) 1650
SacI GAGCTC 1 cut(s) 710
SalI GTCGAC 2 cut(s) 362, 2650
SaqAI TTAA 9 cut(s) 215, 435, 954, 1070, 1119, 1281, 1407, 2019, 2916
Sau96I GGNCC 3 cut(s) 373, 847, 1915
ScaI AGTACT 1 cut(s) 912
ScrFI CCNGG 7 cut(s) 280, 288, 851, 1200, 1670, 2422, 2684
SduI GDGCHC 6 cut(s) 594, 710, 1997, 2636, 2679, 2706
SfcI CTRYAG 3 cut(s) 1539, 2976, 3480
SgsI GGCGCGCC 1 cut(s) 423
SinI GGWCC 2 cut(s) 847, 1915
SmiMI CAYNNNNRTG 1 cut(s) 1650
SmlI CTYRAG 6 cut(s) 308, 1280, 1967, 2124, 2699, 3633
SmoI CTYRAG 6 cut(s) 308, 1280, 1967, 2124, 2699, 3633
SpeI ACTAGT 1 cut(s) 2113
SphI GCATGC 1 cut(s) 1322
SsiI CCGC 5 cut(s) 428, 894, 1955, 2135, 2657
SspMI CTAG 6 cut(s) 182, 2114, 2364, 2784, 2804, 2903
SstI GAGCTC 1 cut(s) 710
StyD4I CCNGG 7 cut(s) 278, 286, 849, 1198, 1668, 2420, 2682
StyI CCWWGG 3 cut(s) 1636, 2327, 2436
TaiI ACGT 3 cut(s) 1662, 1893, 3147
TaqI TCGA 8 cut(s) 363, 392, 1158, 1296, 2651, 3281, 3431, 3497
TatI WGTACW 3 cut(s) 910, 2157, 2822
TauI GCSGC 1 cut(s) 430
Tru1I TTAA 9 cut(s) 215, 435, 954, 1070, 1119, 1281, 1407, 2019, 2916
Tru9I TTAA 9 cut(s) 215, 435, 954, 1070, 1119, 1281, 1407, 2019, 2916
TseFI GTSAC 3 cut(s) 461, 1523, 3220
Tsp45I GTSAC 3 cut(s) 461, 1523, 3220
TspGWI ACGGA 3 cut(s) 1328, 1607, 3401
Van91I CCANNNNNTGG 2 cut(s) 1024, 2453
Vha464I CTTAAG 1 cut(s) 1280
VneI GTGCAC 1 cut(s) 590
VpaK11BI GGWCC 2 cut(s) 847, 1915
VspI ATTAAT 1 cut(s) 435
XapI RAATTY 9 cut(s) 338, 997, 1403, 1881, 2332, 2745, 3133, 3283, 3433
XbaI TCTAGA 1 cut(s) 2902
XceI RCATGY 3 cut(s) 69, 1192, 1322
XmiI GTMKAC 3 cut(s) 363, 551, 2651
XmnI GAANNNNTTC 1 cut(s) 1645
XspI CTAG 6 cut(s) 182, 2114, 2364, 2784, 2804, 2903
ZrmI AGTACT 1 cut(s) 912
Zsp2I ATGCAT 2 cut(s) 1333, 1621
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.