Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0001900

Physical Location & Seq

Genomic Coordinates Forward (+)

8258462 .. 8260934

Gene Structure 2473 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1113700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1662 bp

ATGGCCACTGAACAGAAGAGCAGCTGCGGCGACGGTGGCGGCAGCATCGATCCAAAGAGCGGGTTTTGCTCAAAGACCAAAACTTTCCACAGCCTCAGACCCAAATCCCAACTCCCTCTTCAAACCACGCCTCTTTCCCTCACCCACTACATCCTTTCCCGCCTCCACCAGTCCCCTCCCCCGCCTTCTACTCCCGCCCTAGTCCACGCCACCACCGGCCACCAAATTCTCTACCCCGAGTTCATTCTTCGCGTCCAAAACCTCGCCGCCTCGCTCCAATCTCAGCTCGGTCTCTCCCACGGCCAATGCGCTTTCGTTCTCTCCCCCAACTCCCTCAACCTCCCCATCCTCCACCTCTCTCTCCTCTACCTCGGGGTCATCGTCTCTCCTTCCAACCCCGCCAGCTCCAATCCCGAAATTTCCCGTCAAATCAGTCTCTGCAACCCCGCCGTCGCATTCGCCACCTCCGACACCGCTCACAAAATCCCCAACTCCCTCCGCCTCGGGACCGTCCTCCTCGACTCGTCCGAGTTCGAGTCCATGATGCTGAAGTGTCCGAGTTCGACCAAGTGGAGCCAAATTAGCGTGAGCCAATCGGACACAGCCACGATTCTCTACTCGTCGGGGACGACCGGGAGGGTCAAAGGCGTGGAGTTGACTCACAGGAACTGGATATCCAATTTGGCCAGCAGCGCGGCTCGAAACGCGTCGGCTCCACACGCTGTGTGTCTCTGTACGGCACCGTTTTTCCACGTGTACGGGATCGCGTACTGCCTGAGGGCTTTGGCGACGGGGGACACGCTGGTGTGGATGGCGAGGTTCGATATGAAGGCGATGTTAGGATCCATCGAGCGGTTCGGAATCACCCACGTGGCCTGGGCCCCACCGGTGGCCGTGGCGTTGACGAAGTATGGGGATGGAAACGAGATGGGCGGCTACGATTTGAGTTCGCTGCAAGTGATCGCCTGCGGCGGCGCTCCGCTGGCTAAGAGCGTGATCGAGAAACTGAGGGAACGGCTGCCCAACGTACAAGTCTCTCAGGCATACGGGATGACGGAGACGACGGCCCGAGTGTTTGCCGCGGTGGGTCCGGAAGAAACTGGGGTTGAAGGAGCCAATGGAAAGCTGATGTCAGATCTTGAGGCCAAGATTGTGGATCCTGAGAGTGGCACTGCGCTGCCTCCTTTGATGCATGGGGAACTTTGGGTCAGAGGACCCAACATTATGAAAGGTTACGTTGGTGATGAAGCAGCAACTGCCGCAATTTTGGACTCGGAAGGATGGTTAAAAACCGGAGACATTTGCTACATTGACAACCAAGGTTTTCTATTTTTCGTCGATCGGCTCAAGGAATTGATCAAGTACAAAGGCTACCAGGTTGCCCCGGCAGAGTTGGAGGATCTGCTTCACTCCCACCCAGATATTGTCGATGCAGCTGTGATTCCGTACCCAGATGAGGAAGCAGGTCAAGTTCCGATGGCGTTTGTGGTGAGGTGCCTTGGAAGTGCCATTGATGAATCACAGATCAAGGATTTTATTGCCAAACAGGTTGCGCCATATAAGAAGATACGACGCGTAACATTCACCATGGCAATACCAAAGAATGCACAGGGTAAAGTGTTGAGGAAGGAATTAATCAAACTTGCACCGTCCAGGTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004321 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0008150 GO:0008152 GO:0009058 GO:0009694 GO:0009695 GO:0009987 GO:0010817 GO:0016053 GO:0016408 GO:0016740 GO:0016746 GO:0016747 GO:0019752 GO:0032787 GO:0042445 GO:0042446 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

554

Amino Acids

59.6

Weight (kDa)

7.59

Isoelectric Point (pI)

46.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	61 - 412	3e-76	AMP-binding enzyme
AMP-binding_C	PF13193	464 - 539	3.9e-16	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001900)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63380
fragaria_vesca	FvH4_4g24170 FvH4_5g07750 FvH4_5g07750 FvH4_5g07750
malus_domestica	MD06G1147300.v1.1 MD06G1147500.v1.1 MD13G1113700.v1.1 MD14G1161200.v1.1 MD14G1161300.v1.1 MD16G1112900.v1.1 MD16G1113000.v1.1
prunus_persica	Prupe.1G232500_v2.0.a1 Prupe.5G154000_v2.0.a1 Prupe.5G154100_v2.0.a1
pyrus_communis	pycom06g13680 pycom06g13690 pycom13g09900 pycom14g13410 pycom16g09570 pycom16g09580
rosa_chinensis	RchiOBHm_Chr4g0430951 RchiOBHm_Chr7g0190671 RchiOBHm_Chr7g0190681
rosa_laevigata	RLG00000004504 RLG00000006935
rosa_multiflora	Rmu_co8020444.1_g000001 Rmu_sc0006263.1_g000015 Rmu_sc0006709.1_g000003 Rmu_sc0013571.1_g000005
rosa_roxburghii	Rroxscaffold_3G00264410 Rroxscaffold_5G00372640
rosa_rugosa	Rorug04G0247400 Rorug06G0506300 Rorug06G0506400
rosa_samantha	Rh4AG303200 Rh4AG304100 Rh4BG311400 Rh4CG327700 Rh4DG307500 Rh7AG112900 Rh7BG115400 Rh7CG117900 Rh7DG116800
rosa_wichuraiana	Rw4G026360 Rw7G009850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1660
Acc36I	ACCTGC	1 cut(s)	1454
AccB1I	GGYRCC	2 cut(s)	739, 1494
AccBSI	CCGCTC	3 cut(s)	60, 476, 853
AccII	CGCG	6 cut(s)	252, 695, 707, 767, 1082, 1575
AccIII	TCCGGA	1 cut(s)	1090
AclWI	GGATC	7 cut(s)	44, 770, 837, 850, 1151, 1164, 1407
AcoI	YGGCCR	5 cut(s)	3, 217, 301, 684, 891
AcsI	RAATTY	2 cut(s)	225, 417
AcuI	CTGAAG	1 cut(s)	569
AcvI	CACGTG	2 cut(s)	754, 871
AdeI	CACNNNGTG	1 cut(s)	724
AfaI	GTAC	6 cut(s)	736, 758, 770, 1029, 1364, 1448
AfiI	CCNNNNNNNGG	5 cut(s)	59, 852, 889, 1166, 1456
AflIII	ACRYGT	3 cut(s)	705, 753, 1573
AgeI	ACCGGT	1 cut(s)	886
AgsI	TTSAA	2 cut(s)	122, 1109
AjnI	CCWGG	3 cut(s)	875, 1374, 1652
AjuI	GAANNNNNNNTTGG	2 cut(s)	102, 134
AleI	CACNNNNGTG	2 cut(s)	803, 869
AloI	GAACNNNNNNTCC	2 cut(s)	659, 691
AluBI	AGCT	5 cut(s)	24, 286, 405, 1126, 1436
AluI	AGCT	5 cut(s)	24, 286, 405, 1126, 1436
Alw26I	GTCTC	7 cut(s)	296, 388, 440, 734, 1039, 1052, 1290
AlwI	GGATC	7 cut(s)	44, 770, 837, 850, 1151, 1164, 1407
AlwNI	CAGNNNCTG	3 cut(s)	438, 669, 1256
Ama87I	CYCGRG	4 cut(s)	236, 371, 503, 1068
Aor13HI	TCCGGA	1 cut(s)	1090
AoxI	GGCC	9 cut(s)	3, 217, 301, 684, 873, 879, 891, 1065, 1143
ApaI	GGGCCC	1 cut(s)	883
ApeKI	GCWGC	9 cut(s)	21, 24, 42, 690, 952, 1018, 1177, 1250, 1433
ApoI	RAATTY	2 cut(s)	225, 417
AseI	ATTAAT	1 cut(s)	1634
AsiGI	ACCGGT	1 cut(s)	886
AspLEI	GCGC	5 cut(s)	311, 695, 977, 1177, 1555
AspS9I	GGNCC	6 cut(s)	507, 879, 880, 1066, 1088, 1214
AsuC2I	CCSGG	2 cut(s)	634, 1385
AsuHPI	GGTGA	5 cut(s)	133, 856, 1253, 1501, 1576
AvaI	CYCGRG	4 cut(s)	236, 371, 503, 1068
AvaII	GGWCC	3 cut(s)	507, 1088, 1214
AxyI	CCTNAGG	1 cut(s)	776
BaeGI	GKGCMC	1 cut(s)	883
BalI	TGGCCA	2 cut(s)	5, 686
BamHI	GGATCC	2 cut(s)	842, 1156
BanI	GGYRCC	2 cut(s)	739, 1494
BanII	GRGCYC	1 cut(s)	883
BbrPI	CACGTG	2 cut(s)	754, 871
BbvI	GCAGC	9 cut(s)	11, 33, 54, 702, 939, 1005, 1164, 1262, 1445
BccI	CCATC	7 cut(s)	353, 805, 854, 911, 922, 1275, 1471
BceAI	ACGGC	6 cut(s)	316, 434, 753, 878, 1031, 1080
BciT130I	CCWGG	3 cut(s)	877, 1376, 1654
BclI	TGATCA	1 cut(s)	1356
BcnI	CCSGG	2 cut(s)	634, 1385
BcoDI	GTCTC	7 cut(s)	296, 388, 440, 734, 1039, 1052, 1290
BfaI	CTAG	1 cut(s)	200
BfoI	RGCGCY	1 cut(s)	978
BfuAI	ACCTGC	1 cut(s)	1454
BglII	AGATCT	1 cut(s)	1135
Bme1390I	CCNGG	5 cut(s)	634, 877, 1376, 1385, 1654
Bme18I	GGWCC	3 cut(s)	507, 1088, 1214
BmeT110I	CYCGRG	4 cut(s)	236, 371, 503, 1068
BmgT120I	GGNCC	6 cut(s)	507, 879, 880, 1066, 1088, 1214
BmrFI	CCNGG	5 cut(s)	634, 877, 1376, 1385, 1654
BmrI	ACTGGG	1 cut(s)	1110
BmsI	GCATC	4 cut(s)	54, 534, 1179, 1420
BmuI	ACTGGG	1 cut(s)	1110
BpuEI	CTTGAG	2 cut(s)	1160, 1331
BpuMI	CCSGG	2 cut(s)	634, 1385
Bsa29I	ATCGAT	1 cut(s)	48
BsaAI	YACGTR	2 cut(s)	754, 871
BsaI	GGTCTC	1 cut(s)	296
BsaWI	WCCGGW	3 cut(s)	886, 1090, 1292
Bsc4I	CCNNNNNNNGG	5 cut(s)	59, 852, 889, 1166, 1456
Bse118I	RCCGGY	2 cut(s)	215, 886
Bse1I	ACTGG	3 cut(s)	169, 674, 1105
Bse21I	CCTNAGG	1 cut(s)	776
BseAI	TCCGGA	1 cut(s)	1090
BseBI	CCWGG	3 cut(s)	877, 1376, 1654
BseCI	ATCGAT	1 cut(s)	48
BseGI	GGATG	6 cut(s)	150, 345, 816, 922, 1056, 1286
BseLI	CCNNNNNNNGG	5 cut(s)	59, 852, 889, 1166, 1456
BseMII	CTCAG	6 cut(s)	109, 296, 767, 998, 1052, 1152
BseNI	ACTGG	3 cut(s)	169, 674, 1105
BseRI	GAGGAG	2 cut(s)	353, 506
BseSI	GKGCMC	1 cut(s)	883
BseXI	GCAGC	9 cut(s)	11, 33, 54, 702, 939, 1005, 1164, 1262, 1445
Bsh1236I	CGCG	6 cut(s)	252, 695, 707, 767, 1082, 1575
Bsh1285I	CGRYCG	2 cut(s)	633, 1342
BshFI	GGCC	9 cut(s)	5, 219, 303, 686, 875, 881, 893, 1067, 1145
BshNI	GGYRCC	2 cut(s)	739, 1494
BshTI	ACCGGT	1 cut(s)	886
BshVI	ATCGAT	1 cut(s)	48
BsiEI	CGRYCG	2 cut(s)	633, 1342
BsiHKCI	CYCGRG	4 cut(s)	236, 371, 503, 1068
BsiSI	CCGG	6 cut(s)	216, 633, 887, 1091, 1293, 1385
BslFI	GGGAC	4 cut(s)	157, 520, 640, 809
BslI	CCNNNNNNNGG	5 cut(s)	59, 852, 889, 1166, 1456
BsmAI	GTCTC	7 cut(s)	296, 388, 440, 734, 1039, 1052, 1290
BsmBI	CGTCTC	2 cut(s)	388, 1052
BsmFI	GGGAC	4 cut(s)	157, 520, 640, 809
BsmI	GAATGC	2 cut(s)	455, 1609
BsnI	GGCC	9 cut(s)	5, 219, 303, 686, 875, 881, 893, 1067, 1145
Bso31I	GGTCTC	1 cut(s)	296
BsoBI	CYCGRG	4 cut(s)	236, 371, 503, 1068
Bsp120I	GGGCCC	1 cut(s)	879
Bsp1286I	GDGCHC	1 cut(s)	883
Bsp13I	TCCGGA	1 cut(s)	1090
Bsp19I	CCATGG	1 cut(s)	1587
BspANI	GGCC	9 cut(s)	5, 219, 303, 686, 875, 881, 893, 1067, 1145
BspCNI	CTCAG	6 cut(s)	108, 295, 768, 999, 1051, 1153
BspDI	ATCGAT	1 cut(s)	48
BspEI	TCCGGA	1 cut(s)	1090
BspFNI	CGCG	6 cut(s)	252, 695, 707, 767, 1082, 1575
BspMI	ACCTGC	1 cut(s)	1454
BspPI	GGATC	7 cut(s)	44, 770, 837, 850, 1151, 1164, 1407
BspQI	GCTCTTC	1 cut(s)	11
BspT107I	GGYRCC	2 cut(s)	739, 1494
BspTNI	GGTCTC	1 cut(s)	296
BsrBI	CCGCTC	3 cut(s)	60, 476, 853
BsrFI	RCCGGY	2 cut(s)	215, 886
BsrI	ACTGG	3 cut(s)	169, 674, 1105
BssAI	RCCGGY	2 cut(s)	215, 886
BssT1I	CCWWGG	3 cut(s)	1318, 1498, 1587
Bst2UI	CCWGG	3 cut(s)	877, 1376, 1654
Bst4CI	ACNGT	4 cut(s)	35, 511, 744, 1650
Bst6I	CTCTTC	2 cut(s)	11, 123
BstAPI	GCANNNNNTGC	1 cut(s)	1256
BstBAI	YACGTR	2 cut(s)	754, 871
BstC8I	GCNNGC	4 cut(s)	403, 688, 967, 984
BstDEI	CTNAG	7 cut(s)	95, 282, 776, 987, 1007, 1038, 1161
BstDSI	CCRYGG	4 cut(s)	298, 894, 1080, 1587
BstF5I	GGATG	6 cut(s)	150, 345, 816, 922, 1056, 1286
BstFNI	CGCG	6 cut(s)	252, 695, 707, 767, 1082, 1575
BstH2I	RGCGCY	1 cut(s)	978
BstHHI	GCGC	5 cut(s)	311, 695, 977, 1177, 1555
BstMAI	GTCTC	7 cut(s)	296, 388, 440, 734, 1039, 1052, 1290
BstMCI	CGRYCG	2 cut(s)	633, 1342
BstNI	CCWGG	3 cut(s)	877, 1376, 1654
BstSCI	CCNGG	5 cut(s)	632, 875, 1374, 1383, 1652
BstSLI	GKGCMC	1 cut(s)	883
BstUI	CGCG	6 cut(s)	252, 695, 707, 767, 1082, 1575
BstV1I	GCAGC	9 cut(s)	11, 33, 54, 702, 939, 1005, 1164, 1262, 1445
BstX2I	RGATCY	4 cut(s)	842, 1135, 1156, 1399
BstXI	CCANNNNNNTGG	1 cut(s)	1153
BstYI	RGATCY	4 cut(s)	842, 1135, 1156, 1399
Bsu15I	ATCGAT	1 cut(s)	48
Bsu36I	CCTNAGG	1 cut(s)	776
BsuRI	GGCC	9 cut(s)	5, 219, 303, 686, 875, 881, 893, 1067, 1145
BsuTUI	ATCGAT	1 cut(s)	48
BtgI	CCRYGG	4 cut(s)	298, 894, 1080, 1587
BtgZI	GCGATG	1 cut(s)	848
BtsCI	GGATG	6 cut(s)	150, 345, 816, 922, 1056, 1286
BtsI	GCAGTG	1 cut(s)	1170
BtsIMutI	CAGTG	2 cut(s)	6, 1170
BveI	ACCTGC	1 cut(s)	1454
Cac8I	GCNNGC	4 cut(s)	403, 688, 967, 984
CaiI	CAGNNNCTG	3 cut(s)	438, 669, 1256
CfoI	GCGC	5 cut(s)	311, 695, 977, 1177, 1555
Cfr10I	RCCGGY	2 cut(s)	215, 886
Cfr13I	GGNCC	6 cut(s)	507, 879, 880, 1066, 1088, 1214
Cfr42I	CCGCGG	1 cut(s)	1083
ClaI	ATCGAT	1 cut(s)	48
CseI	GACGC	3 cut(s)	241, 696, 1581
CsiI	ACCWGGT	1 cut(s)	1374
Csp6I	GTAC	6 cut(s)	735, 757, 769, 1028, 1363, 1447
CspAI	ACCGGT	1 cut(s)	886
CviAII	CATG	3 cut(s)	541, 1193, 1588
CviQI	GTAC	6 cut(s)	735, 757, 769, 1028, 1363, 1447
DdeI	CTNAG	7 cut(s)	95, 282, 776, 987, 1007, 1038, 1161
DraIII	CACNNNGTG	1 cut(s)	724
EaeI	YGGCCR	5 cut(s)	3, 217, 301, 684, 891
Eam1104I	CTCTTC	2 cut(s)	11, 123
EarI	CTCTTC	2 cut(s)	11, 123
EciI	GGCGGA	1 cut(s)	488
Eco130I	CCWWGG	3 cut(s)	1318, 1498, 1587
Eco24I	GRGCYC	1 cut(s)	883
Eco31I	GGTCTC	1 cut(s)	296
Eco32I	GATATC	1 cut(s)	675
Eco47I	GGWCC	3 cut(s)	507, 1088, 1214
Eco57I	CTGAAG	1 cut(s)	569
Eco72I	CACGTG	2 cut(s)	754, 871
Eco81I	CCTNAGG	1 cut(s)	776
Eco88I	CYCGRG	4 cut(s)	236, 371, 503, 1068
EcoO109I	RGGNCCY	2 cut(s)	880, 1214
EcoRII	CCWGG	3 cut(s)	875, 1374, 1652
EcoRV	GATATC	1 cut(s)	675
EcoT14I	CCWWGG	3 cut(s)	1318, 1498, 1587
EcoT22I	ATGCAT	1 cut(s)	1194
EcoT38I	GRGCYC	1 cut(s)	883
ErhI	CCWWGG	3 cut(s)	1318, 1498, 1587
Esp3I	CGTCTC	2 cut(s)	388, 1052
FaeI	CATG	3 cut(s)	544, 1196, 1591
FaqI	GGGAC	4 cut(s)	157, 520, 640, 809
FatI	CATG	3 cut(s)	540, 1192, 1587
FauI	CCCGC	6 cut(s)	53, 167, 189, 202, 406, 454
FbaI	TGATCA	1 cut(s)	1356
FokI	GGATG	6 cut(s)	137, 332, 823, 929, 1063, 1293
FriOI	GRGCYC	1 cut(s)	883
FspBI	CTAG	1 cut(s)	200
GlaI	GCGC	5 cut(s)	310, 694, 976, 1176, 1554
HaeII	RGCGCY	1 cut(s)	978
HaeIII	GGCC	9 cut(s)	5, 219, 303, 686, 875, 881, 893, 1067, 1145
HapII	CCGG	6 cut(s)	216, 633, 887, 1091, 1293, 1385
HgaI	GACGC	3 cut(s)	241, 696, 1581
HhaI	GCGC	5 cut(s)	311, 695, 977, 1177, 1555
Hin1II	CATG	3 cut(s)	544, 1196, 1591
Hin6I	GCGC	5 cut(s)	309, 693, 975, 1175, 1553
HinP1I	GCGC	5 cut(s)	309, 693, 975, 1175, 1553
HincII	GTYRAC	2 cut(s)	657, 903
HindII	GTYRAC	2 cut(s)	657, 903
HinfI	GANTC	8 cut(s)	521, 536, 610, 658, 861, 1271, 1441, 1517
HpaII	CCGG	6 cut(s)	216, 633, 887, 1091, 1293, 1385
HphI	GGTGA	5 cut(s)	133, 856, 1253, 1501, 1576
Hpy166II	GTNNAC	4 cut(s)	205, 657, 757, 903
Hpy188III	TCNNGA	6 cut(s)	413, 505, 1000, 1091, 1139, 1160
Hpy8I	GTNNAC	4 cut(s)	205, 657, 757, 903
Hpy99I	CGWCG	8 cut(s)	35, 455, 625, 712, 793, 1066, 1340, 1575
HpyAV	CCTTC	6 cut(s)	195, 399, 823, 1103, 1271, 1621
HpyCH4III	ACNGT	4 cut(s)	35, 511, 744, 1650
HpyCH4IV	ACGT	4 cut(s)	753, 870, 1026, 1236
HpyCH4V	TGCA	6 cut(s)	441, 955, 1192, 1433, 1607, 1646
HpyF3I	CTNAG	7 cut(s)	95, 282, 776, 987, 1007, 1038, 1161
HpySE526I	ACGT	4 cut(s)	753, 870, 1026, 1236
Hsp92II	CATG	3 cut(s)	544, 1196, 1591
HspAI	GCGC	5 cut(s)	309, 693, 975, 1175, 1553
Kpn2I	TCCGGA	1 cut(s)	1090
Ksp22I	TGATCA	1 cut(s)	1356
KspI	CCGCGG	1 cut(s)	1083
LguI	GCTCTTC	1 cut(s)	11
LmnI	GCTCC	6 cut(s)	279, 410, 573, 718, 982, 1112
Lsp1109I	GCAGC	9 cut(s)	11, 33, 54, 702, 939, 1005, 1164, 1262, 1445
LweI	GCATC	4 cut(s)	54, 534, 1179, 1420
MabI	ACCWGGT	1 cut(s)	1374
MaeI	CTAG	1 cut(s)	200
MaeII	ACGT	4 cut(s)	753, 870, 1026, 1236
MaeIII	GTNAC	2 cut(s)	1232, 1576
MbiI	CCGCTC	3 cut(s)	60, 476, 853
MboII	GAAGA	5 cut(s)	28, 110, 239, 1106, 1576
MflI	RGATCY	4 cut(s)	842, 1135, 1156, 1399
MhlI	GDGCHC	1 cut(s)	883
MlsI	TGGCCA	2 cut(s)	5, 686
MluCI	AATT	7 cut(s)	225, 417, 579, 679, 1263, 1352, 1631
MluI	ACGCGT	2 cut(s)	705, 1573
MluNI	TGGCCA	2 cut(s)	5, 686
MlyI	GAGTC	4 cut(s)	515, 545, 652, 1265
MmeI	TCCRAC	3 cut(s)	417, 492, 1374
Mox20I	TGGCCA	2 cut(s)	5, 686
Mph1103I	ATGCAT	1 cut(s)	1194
MroI	TCCGGA	1 cut(s)	1090
MscI	TGGCCA	2 cut(s)	5, 686
MseI	TTAA	2 cut(s)	1286, 1634
MslI	CAYNNNNRTG	2 cut(s)	803, 869
Msp20I	TGGCCA	2 cut(s)	5, 686
MspA1I	CMGCKG	4 cut(s)	24, 982, 1082, 1436
MspI	CCGG	6 cut(s)	216, 633, 887, 1091, 1293, 1385
MspR9I	CCNGG	5 cut(s)	634, 877, 1376, 1385, 1654
Mva1269I	GAATGC	2 cut(s)	455, 1609
MvaI	CCWGG	3 cut(s)	877, 1376, 1654
MvnI	CGCG	6 cut(s)	252, 695, 707, 767, 1082, 1575
NciI	CCSGG	2 cut(s)	634, 1385
NcoI	CCATGG	1 cut(s)	1587
NlaIII	CATG	3 cut(s)	544, 1196, 1591
NsiI	ATGCAT	1 cut(s)	1194
OliI	CACNNNNGTG	2 cut(s)	803, 869
PciSI	GCTCTTC	1 cut(s)	11
PcsI	WCGNNNNNNNCGW	4 cut(s)	378, 465, 525, 626
PctI	GAATGC	2 cut(s)	455, 1609
PfeI	GAWTC	4 cut(s)	610, 861, 1441, 1517
PinAI	ACCGGT	1 cut(s)	886
Ple19I	CGATCG	1 cut(s)	1342
PleI	GAGTC	4 cut(s)	515, 544, 652, 1265
PmaCI	CACGTG	2 cut(s)	754, 871
PmlI	CACGTG	2 cut(s)	754, 871
PpsI	GAGTC	4 cut(s)	515, 544, 652, 1265
Ppu21I	YACGTR	2 cut(s)	754, 871
PpuMI	RGGWCCY	1 cut(s)	1214
PshBI	ATTAAT	1 cut(s)	1634
PsiI	TTATAA	1 cut(s)	1660
Psp5II	RGGWCCY	1 cut(s)	1214
Psp6I	CCWGG	3 cut(s)	875, 1374, 1652
PspCI	CACGTG	2 cut(s)	754, 871
PspGI	CCWGG	3 cut(s)	875, 1374, 1652
PspOMI	GGGCCC	1 cut(s)	879
PspPI	GGNCC	6 cut(s)	507, 879, 880, 1066, 1088, 1214
PspPPI	RGGWCCY	1 cut(s)	1214
PstNI	CAGNNNCTG	3 cut(s)	438, 669, 1256
PsuI	RGATCY	4 cut(s)	842, 1135, 1156, 1399
PvuI	CGATCG	1 cut(s)	1342
PvuII	CAGCTG	2 cut(s)	24, 1436
RsaI	GTAC	6 cut(s)	736, 758, 770, 1029, 1364, 1448
RsaNI	GTAC	6 cut(s)	735, 757, 769, 1028, 1363, 1447
RseI	CAYNNNNRTG	2 cut(s)	803, 869
SacII	CCGCGG	1 cut(s)	1083
SapI	GCTCTTC	1 cut(s)	11
SaqAI	TTAA	2 cut(s)	1286, 1634
Sau96I	GGNCC	6 cut(s)	507, 879, 880, 1066, 1088, 1214
SchI	GAGTC	4 cut(s)	515, 545, 652, 1265
ScrFI	CCNGG	5 cut(s)	634, 877, 1376, 1385, 1654
SduI	GDGCHC	1 cut(s)	883
SexAI	ACCWGGT	1 cut(s)	1374
SfaNI	GCATC	4 cut(s)	54, 534, 1179, 1420
Sfr303I	CCGCGG	1 cut(s)	1083
SgrAI	CRCCGGYG	1 cut(s)	886
SgrBI	CCGCGG	1 cut(s)	1083
SinI	GGWCC	3 cut(s)	507, 1088, 1214
SmiMI	CAYNNNNRTG	2 cut(s)	803, 869
SmlI	CTYRAG	2 cut(s)	1139, 1346
SmoI	CTYRAG	2 cut(s)	1139, 1346
Sse9I	AATT	7 cut(s)	225, 417, 579, 679, 1263, 1352, 1631
SspMI	CTAG	1 cut(s)	200
StyD4I	CCNGG	5 cut(s)	632, 875, 1374, 1383, 1652
StyI	CCWWGG	3 cut(s)	1318, 1498, 1587
TaaI	ACNGT	4 cut(s)	35, 511, 744, 1650
TaiI	ACGT	4 cut(s)	756, 873, 1029, 1239
TaqII	GACCGA	1 cut(s)	278
TasI	AATT	7 cut(s)	225, 417, 579, 679, 1263, 1352, 1631
TatI	WGTACW	1 cut(s)	1362
TauI	GCSGC	9 cut(s)	30, 42, 269, 698, 936, 972, 975, 1082, 1262
TfiI	GAWTC	4 cut(s)	610, 861, 1441, 1517
Tru1I	TTAA	2 cut(s)	1286, 1634
Tru9I	TTAA	2 cut(s)	1286, 1634
TscAI	CASTG	2 cut(s)	13, 1177
TseI	GCWGC	9 cut(s)	21, 24, 42, 690, 952, 1018, 1177, 1250, 1433
TspDTI	ATGAA	5 cut(s)	232, 842, 1241, 1260, 1530
TspGWI	ACGGA	2 cut(s)	1070, 1434
TspRI	CASTG	2 cut(s)	13, 1177
VpaK11BI	GGWCC	3 cut(s)	507, 1088, 1214
VspI	ATTAAT	1 cut(s)	1634
XapI	RAATTY	2 cut(s)	225, 417
XspI	CTAG	1 cut(s)	200
Zsp2I	ATGCAT	1 cut(s)	1194

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.