Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0001900

Physical Location & Seq

Genomic Coordinates Forward (+)

9113948 .. 9117625

Gene Structure 3678 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G009850.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1662 bp

ATGGCCGAGCCGACCTCCAAGCTCCCCCCTCCGATCAACCCCAAGTCCGGCTTCTGCTCCGAAACGAAAACCTTCCACTCCCTCCGCCCCATAGTCCCTCTCCCGCCTCTCTCCCAGCCCATGTCCCTCGCCCACTACACCCTCTCCCTCCTCCAATCATCCTCCGCCAGTACTCCTCCATCCTCCACCCCTGCCCTCATCGACGCCTCCTCCGCCCGCCGCCTCTCCTACTCCCACTTCCTCTCCCAGTTCCACTCCCTCACTCTCTCCCTCTCCCCCCTCCTCTCCAAATCCCAAGTCGCTTACATCCTCTCCCCTCCTTCCCTCCACGTCCCCCTCCTCTACTTCTCCCTCCTCGCCTTAGGCGTCGTCGTCTCCCCCGCCAACCCCCTCAGCTCCCTCGACGAGATCGCCTACCAGCTCCGGCTCACCAACCCCGCCCTCGCCTTCGCCACCTCAGCCACCGCTCACAAGCTCCCCAAGGGCTTCAAAACCATCCTCCTCGACTCCCCCGAGTTCTACTCCATGATCGAACCCGGCACCCGACCCGCACCACCCTGTAACCCCGTCGAGGTTAACCAGACCGACACGGCCGCCATTCTGTACTCGTCCGGCACCACCGGCCGGGTCAAGGGCGTGGTTCTGTCTCACCGGAACTTCATAGCCTTGATCGCCGGGATGCACGCGCTCCGGATGGAACCCGACCCGGTGGTCCATCCGGTGTCGATGCTCACGCTGCCGCTGTTCCACGTGTTCGGGTTCTTCATGCTGATCCGGGCCGTTTCCACCGGCGAGACTCTGGTTCTGACGGAGCGGTTCGAATTCGAAGGGATGTTGAAGGCCGTGGAGAGGTTCAAGGTGACGCACATGCCGGTGTCGCCGCCGCTGATTGTGGCTCTGACCAAGTCGGAGCTGACTAAGAAATACGACCTCAGCTCGCTCAGGCTTCTCGGCAGCGGCGGCGCTCCGCTCGGCAAAGATGTAGCTGAGAGGTTCATTCAGAAATTTCCCAATGTGGAAATAGTGCAGGGATATGGTTTGACTGAATCTGGAGGAGGGGCTACGAGAATAGCAGATGCTGAAGAGGCAAAGCAGTATGGTTCTGTAGGCCGCTTGGCTGAAAATATGGAAGCCAAGATCGTTGACCCAGAAACTGGAGAGGCCTTGCCTCCTGGCCAGAGGGGCGAGCTGTGGTTGCGAGGTCCTACAATAATGAAAGGTTATGTAGGAGATGACAAGGCAACTGCTGAGACCTTGGATAAAGACGGGTGGTTAAAGACTGGTGATCTTTGTTATTTTGACGACGAGGGGTTCTTGTACATTGTGGACAGGTTAAAGGAATTGATAAAGTACAAGGCTTATCAGGTACCCCCAGCTGAGTTGGAACATATACTTCAATCACATCCTGACATTGTTGATGTTGCTGTGATTCCATACCCTGATGAAGAAGCAGGGCAGATTCCCATGGCCTATGTTGTTAGAAAACCAGGAAGCAATATCACCGAGGCTATAGTAATGGATTTTGTTGCAAAACAAGTAGCACCATACAAGAAGATTCGGCGTGTATCATTCATCAACTCTATTCCAAAATCTCCAGCAGGGAAGATTATGAGAAGGGAGCTAGTTACCCTTGCGCTATCTAGTGGCTCATCTAAACTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004321 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0008150 GO:0008152 GO:0009058 GO:0009694 GO:0009695 GO:0009987 GO:0010817 GO:0016053 GO:0016408 GO:0016740 GO:0016746 GO:0016747 GO:0019752 GO:0032787 GO:0042445 GO:0042446 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

553

Amino Acids

60.17

Weight (kDa)

7.72

Isoelectric Point (pI)

44.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	56 - 408	2e-79	AMP-binding enzyme
AMP-binding_C	PF13193	460 - 535	1.3e-17	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001900)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63380
fragaria_vesca	FvH4_4g24170 FvH4_5g07750 FvH4_5g07750 FvH4_5g07750
malus_domestica	MD06G1147300.v1.1 MD06G1147500.v1.1 MD13G1113700.v1.1 MD14G1161200.v1.1 MD14G1161300.v1.1 MD16G1112900.v1.1 MD16G1113000.v1.1
prunus_persica	Prupe.1G232500_v2.0.a1 Prupe.5G154000_v2.0.a1 Prupe.5G154100_v2.0.a1
pyrus_communis	pycom06g13680 pycom06g13690 pycom13g09900 pycom14g13410 pycom16g09570 pycom16g09580
rosa_chinensis	RchiOBHm_Chr4g0430951 RchiOBHm_Chr7g0190671 RchiOBHm_Chr7g0190681
rosa_laevigata	RLG00000004504 RLG00000006935
rosa_multiflora	Rmu_co8020444.1_g000001 Rmu_sc0006263.1_g000015 Rmu_sc0006709.1_g000003 Rmu_sc0013571.1_g000005
rosa_roxburghii	Rroxscaffold_3G00264410 Rroxscaffold_5G00372640
rosa_rugosa	Rorug04G0247400 Rorug06G0506300 Rorug06G0506400
rosa_samantha	Rh4AG303200 Rh4AG304100 Rh4BG311400 Rh4CG327700 Rh4DG307500 Rh7AG112900 Rh7BG115400 Rh7CG117900 Rh7DG116800
rosa_wichuraiana	Rw4G026360 Rw7G009850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	710
Acc65I	GGTACC	1 cut(s)	1366
AccB1I	GGYRCC	3 cut(s)	539, 614, 1366
AccB7I	CCANNNNNTGG	1 cut(s)	1154
AccBSI	CCGCTC	3 cut(s)	467, 814, 970
AccII	CGCG	1 cut(s)	686
AccIII	TCCGGA	1 cut(s)	690
AclWI	GGATC	1 cut(s)	766
AcoI	YGGCCR	4 cut(s)	3, 591, 622, 1174
AcsI	RAATTY	2 cut(s)	821, 1004
AcuI	CTGAAG	1 cut(s)	1101
AcvI	CACGTG	1 cut(s)	751
AcyI	GRCGYC	2 cut(s)	204, 366
AfaI	GTAC	5 cut(s)	172, 605, 1319, 1352, 1368
AfiI	CCNNNNNNNGG	6 cut(s)	47, 571, 624, 631, 849, 1154
AflIII	ACRYGT	1 cut(s)	750
AgsI	TTSAA	4 cut(s)	490, 838, 856, 1397
AjiI	CACGTC	1 cut(s)	331
AjnI	CCWGG	2 cut(s)	1171, 1486
AjuI	GAANNNNNNNTTGG	2 cut(s)	35, 67
Alw26I	GTCTC	4 cut(s)	379, 651, 788, 1244
AlwI	GGATC	1 cut(s)	766
AlwNI	CAGNNNCTG	2 cut(s)	1079, 1154
Ama87I	CYCGRG	1 cut(s)	512
Aor13HI	TCCGGA	1 cut(s)	690
AoxI	GGCC	9 cut(s)	3, 591, 622, 777, 840, 1108, 1161, 1174, 1467
ApeKI	GCWGC	2 cut(s)	736, 954
ApoI	RAATTY	2 cut(s)	821, 1004
ArsI	GACNNNNNNTTYG	2 cut(s)	282, 314
Asp700I	GAANNNNTTC	1 cut(s)	71
Asp718I	GGTACC	1 cut(s)	1366
AspLEI	GCGC	3 cut(s)	688, 965, 1636
AspS9I	GGNCC	3 cut(s)	712, 777, 1202
AsuC2I	CCSGG	5 cut(s)	537, 626, 676, 707, 776
AsuHPI	GGTGA	5 cut(s)	421, 641, 871, 1295, 1492
AsuII	TTCGAA	2 cut(s)	819, 825
AvaI	CYCGRG	1 cut(s)	512
AvaII	GGWCC	2 cut(s)	712, 1202
AxyI	CCTNAGG	1 cut(s)	361
BalI	TGGCCA	1 cut(s)	1176
BanI	GGYRCC	3 cut(s)	539, 614, 1366
BbrPI	CACGTG	1 cut(s)	751
BbvCI	CCTCAGC	3 cut(s)	392, 457, 932
BbvI	GCAGC	2 cut(s)	723, 966
BccI	CCATC	4 cut(s)	187, 503, 688, 723
BceAI	ACGGC	3 cut(s)	606, 764, 827
BciT130I	CCWGG	2 cut(s)	1173, 1488
BcnI	CCSGG	5 cut(s)	537, 626, 676, 707, 776
BcoDI	GTCTC	4 cut(s)	379, 651, 788, 1244
BfaI	CTAG	2 cut(s)	1622, 1641
BfmI	CTRYAG	2 cut(s)	1104, 1509
BfoI	RGCGCY	1 cut(s)	966
BglI	GCCNNNNNGGC	1 cut(s)	1182
BmcAI	AGTACT	1 cut(s)	172
Bme1390I	CCNGG	7 cut(s)	537, 626, 676, 707, 776, 1173, 1488
Bme18I	GGWCC	2 cut(s)	712, 1202
BmeT110I	CYCGRG	1 cut(s)	512
BmgBI	CACGTC	1 cut(s)	331
BmgT120I	GGNCC	3 cut(s)	712, 777, 1202
BmiI	GGNNCC	4 cut(s)	541, 616, 699, 1368
BmrFI	CCNGG	7 cut(s)	537, 626, 676, 707, 776, 1173, 1488
BmrI	ACTGGG	1 cut(s)	241
BmsI	GCATC	3 cut(s)	669, 717, 1066
BmuI	ACTGGG	1 cut(s)	241
BplI	GAGNNNNNCTC	3 cut(s)	31, 506, 538
BpmI	CTGGAG	3 cut(s)	1071, 1176, 1578
Bpu10I	CCTNAGC	4 cut(s)	392, 457, 932, 941
Bpu14I	TTCGAA	2 cut(s)	819, 825
BpuMI	CCSGG	5 cut(s)	537, 626, 676, 707, 776
BsaAI	YACGTR	1 cut(s)	751
BsaHI	GRCGYC	2 cut(s)	204, 366
BsaI	GGTCTC	1 cut(s)	1244
BsaJI	CCNNGG	5 cut(s)	480, 843, 1254, 1464, 1503
BsaWI	WCCGGW	3 cut(s)	651, 690, 718
BsaXI	ACNNNNNCTCC	8 cut(s)	128, 158, 194, 224, 227, 257, 296, 326
Bsc4I	CCNNNNNNNGG	6 cut(s)	47, 571, 624, 631, 849, 1154
Bse118I	RCCGGY	3 cut(s)	620, 788, 871
Bse1I	ACTGG	4 cut(s)	168, 247, 1159, 1285
Bse21I	CCTNAGG	1 cut(s)	361
BseAI	TCCGGA	1 cut(s)	690
BseBI	CCWGG	2 cut(s)	1173, 1488
BseDI	CCNNGG	5 cut(s)	480, 843, 1254, 1464, 1503
BseGI	GGATG	9 cut(s)	158, 179, 306, 495, 684, 699, 715, 837, 1402
BseLI	CCNNNNNNNGG	6 cut(s)	47, 571, 624, 631, 849, 1154
BseMII	CTCAG	7 cut(s)	406, 471, 946, 955, 978, 1239, 1368
BseNI	ACTGG	4 cut(s)	168, 247, 1159, 1285
BseRI	GAGGAG	8 cut(s)	140, 165, 199, 272, 329, 344, 491, 1068
BseX3I	CGGCCG	2 cut(s)	591, 622
BseXI	GCAGC	2 cut(s)	723, 966
BseYI	CCCAGC	2 cut(s)	114, 1372
BsgI	GTGCAG	1 cut(s)	1046
Bsh1236I	CGCG	1 cut(s)	686
Bsh1285I	CGRYCG	2 cut(s)	594, 625
BshFI	GGCC	9 cut(s)	5, 593, 624, 779, 842, 1110, 1163, 1176, 1469
BshNI	GGYRCC	3 cut(s)	539, 614, 1366
BsiEI	CGRYCG	2 cut(s)	594, 625
BsiHKCI	CYCGRG	1 cut(s)	512
BslFI	GGGAC	3 cut(s)	80, 109, 317
BslI	CCNNNNNNNGG	6 cut(s)	47, 571, 624, 631, 849, 1154
BsmAI	GTCTC	4 cut(s)	379, 651, 788, 1244
BsmBI	CGTCTC	1 cut(s)	379
BsmFI	GGGAC	3 cut(s)	80, 109, 317
BsnI	GGCC	9 cut(s)	5, 593, 624, 779, 842, 1110, 1163, 1176, 1469
Bso31I	GGTCTC	1 cut(s)	1244
BsoBI	CYCGRG	1 cut(s)	512
Bsp119I	TTCGAA	2 cut(s)	819, 825
Bsp13I	TCCGGA	1 cut(s)	690
Bsp1407I	TGTACA	1 cut(s)	1317
Bsp143I	GATC	7 cut(s)	33, 408, 528, 669, 771, 1137, 1285
Bsp19I	CCATGG	1 cut(s)	1464
BspANI	GGCC	9 cut(s)	5, 593, 624, 779, 842, 1110, 1163, 1176, 1469
BspCNI	CTCAG	7 cut(s)	405, 470, 945, 954, 979, 1240, 1369
BspEI	TCCGGA	1 cut(s)	690
BspFNI	CGCG	1 cut(s)	686
BspLI	GGNNCC	4 cut(s)	541, 616, 699, 1368
BspPI	GGATC	1 cut(s)	766
BspT104I	TTCGAA	2 cut(s)	819, 825
BspT107I	GGYRCC	3 cut(s)	539, 614, 1366
BspTNI	GGTCTC	1 cut(s)	1244
BsrBI	CCGCTC	3 cut(s)	467, 814, 970
BsrFI	RCCGGY	3 cut(s)	620, 788, 871
BsrGI	TGTACA	1 cut(s)	1317
BsrI	ACTGG	4 cut(s)	168, 247, 1159, 1285
BssAI	RCCGGY	3 cut(s)	620, 788, 871
BssECI	CCNNGG	5 cut(s)	480, 843, 1254, 1464, 1503
BssMI	GATC	7 cut(s)	33, 408, 528, 669, 771, 1137, 1285
BssNI	GRCGYC	2 cut(s)	204, 366
BssT1I	CCWWGG	3 cut(s)	480, 1254, 1464
Bst2UI	CCWGG	2 cut(s)	1173, 1488
Bst6I	CTCTTC	1 cut(s)	1077
BstACI	GRCGYC	2 cut(s)	204, 366
BstAUI	TGTACA	1 cut(s)	1317
BstBAI	YACGTR	1 cut(s)	751
BstBI	TTCGAA	2 cut(s)	819, 825
BstC8I	GCNNGC	4 cut(s)	217, 684, 938, 1187
BstDEI	CTNAG	9 cut(s)	361, 392, 457, 918, 932, 941, 987, 1248, 1377
BstDSI	CCRYGG	2 cut(s)	843, 1464
BstF5I	GGATG	9 cut(s)	158, 179, 306, 495, 684, 699, 715, 837, 1402
BstFNI	CGCG	1 cut(s)	686
BstH2I	RGCGCY	1 cut(s)	966
BstHHI	GCGC	3 cut(s)	688, 965, 1636
BstKTI	GATC	7 cut(s)	36, 411, 531, 672, 774, 1140, 1288
BstMAI	GTCTC	4 cut(s)	379, 651, 788, 1244
BstMBI	GATC	7 cut(s)	33, 408, 528, 669, 771, 1137, 1285
BstMCI	CGRYCG	2 cut(s)	594, 625
BstNI	CCWGG	2 cut(s)	1173, 1488
BstNSI	RCATGY	1 cut(s)	871
BstSCI	CCNGG	7 cut(s)	535, 624, 674, 705, 774, 1171, 1486
BstSFI	CTRYAG	2 cut(s)	1104, 1509
BstUI	CGCG	1 cut(s)	686
BstV1I	GCAGC	2 cut(s)	723, 966
BstZI	CGGCCG	2 cut(s)	591, 622
Bsu36I	CCTNAGG	1 cut(s)	361
BsuRI	GGCC	9 cut(s)	5, 593, 624, 779, 842, 1110, 1163, 1176, 1469
BtgI	CCRYGG	2 cut(s)	843, 1464
BtrI	CACGTC	1 cut(s)	331
BtsCI	GGATG	9 cut(s)	158, 179, 306, 495, 684, 699, 715, 837, 1402
Cac8I	GCNNGC	4 cut(s)	217, 684, 938, 1187
CaiI	CAGNNNCTG	2 cut(s)	1079, 1154
CfoI	GCGC	3 cut(s)	688, 965, 1636
Cfr10I	RCCGGY	3 cut(s)	620, 788, 871
Cfr13I	GGNCC	3 cut(s)	712, 777, 1202
CseI	GACGC	3 cut(s)	212, 355, 871
Csp6I	GTAC	5 cut(s)	171, 604, 1318, 1351, 1367
CviAII	CATG	5 cut(s)	121, 526, 766, 868, 1465
CviQI	GTAC	5 cut(s)	171, 604, 1318, 1351, 1367
DdeI	CTNAG	9 cut(s)	361, 392, 457, 918, 932, 941, 987, 1248, 1377
DpnI	GATC	7 cut(s)	35, 410, 530, 671, 773, 1139, 1287
DpnII	GATC	7 cut(s)	33, 408, 528, 669, 771, 1137, 1285
DrdI	GACNNNNNNGTC	1 cut(s)	710
DseDI	GACNNNNNNGTC	1 cut(s)	710
EaeI	YGGCCR	4 cut(s)	3, 591, 622, 1174
EagI	CGGCCG	2 cut(s)	591, 622
Eam1104I	CTCTTC	1 cut(s)	1077
EarI	CTCTTC	1 cut(s)	1077
EciI	GGCGGA	3 cut(s)	74, 154, 202
EclXI	CGGCCG	2 cut(s)	591, 622
Eco130I	CCWWGG	3 cut(s)	480, 1254, 1464
Eco147I	AGGCCT	1 cut(s)	1163
Eco31I	GGTCTC	1 cut(s)	1244
Eco47I	GGWCC	2 cut(s)	712, 1202
Eco52I	CGGCCG	2 cut(s)	591, 622
Eco57I	CTGAAG	1 cut(s)	1101
Eco72I	CACGTG	1 cut(s)	751
Eco81I	CCTNAGG	1 cut(s)	361
Eco88I	CYCGRG	1 cut(s)	512
EcoO109I	RGGNCCY	1 cut(s)	1202
EcoRI	GAATTC	1 cut(s)	821
EcoRII	CCWGG	2 cut(s)	1171, 1486
EcoT14I	CCWWGG	3 cut(s)	480, 1254, 1464
ErhI	CCWWGG	3 cut(s)	480, 1254, 1464
Esp3I	CGTCTC	1 cut(s)	379
FaeI	CATG	5 cut(s)	124, 529, 769, 871, 1468
FalI	AAGNNNNNCTT	2 cut(s)	35, 67
FaqI	GGGAC	3 cut(s)	80, 109, 317
FatI	CATG	5 cut(s)	120, 525, 765, 867, 1464
FauI	CCCGC	5 cut(s)	111, 224, 388, 445, 556
FokI	GGATG	9 cut(s)	145, 166, 293, 482, 691, 702, 706, 844, 1389
FspBI	CTAG	2 cut(s)	1622, 1641
GlaI	GCGC	3 cut(s)	687, 964, 1635
GsaI	CCCAGC	2 cut(s)	118, 1376
GsuI	CTGGAG	3 cut(s)	1071, 1176, 1578
HaeII	RGCGCY	1 cut(s)	966
HaeIII	GGCC	9 cut(s)	5, 593, 624, 779, 842, 1110, 1163, 1176, 1469
HgaI	GACGC	3 cut(s)	212, 355, 871
HhaI	GCGC	3 cut(s)	688, 965, 1636
Hin1I	GRCGYC	2 cut(s)	204, 366
Hin1II	CATG	5 cut(s)	124, 529, 769, 871, 1468
Hin6I	GCGC	3 cut(s)	686, 963, 1634
HinP1I	GCGC	3 cut(s)	686, 963, 1634
HincII	GTYRAC	2 cut(s)	577, 1144
HindII	GTYRAC	2 cut(s)	577, 1144
HinfI	GANTC	6 cut(s)	506, 796, 1046, 1429, 1459, 1555
HpaI	GTTAAC	1 cut(s)	577
HphI	GGTGA	5 cut(s)	421, 641, 871, 1295, 1492
Hpy166II	GTNNAC	3 cut(s)	577, 1144, 1327
Hpy188I	TCNGA	6 cut(s)	33, 61, 807, 900, 910, 1002
Hpy188III	TCNNGA	3 cut(s)	691, 1050, 1406
Hpy8I	GTNNAC	3 cut(s)	577, 1144, 1327
Hpy99I	CGWCG	6 cut(s)	206, 371, 374, 407, 572, 1307
HpyAV	CCTTC	6 cut(s)	82, 330, 457, 821, 832, 1608
HpyCH4IV	ACGT	2 cut(s)	330, 750
HpyCH4V	TGCA	3 cut(s)	682, 1027, 1529
HpyF3I	CTNAG	9 cut(s)	361, 392, 457, 918, 932, 941, 987, 1248, 1377
HpySE526I	ACGT	2 cut(s)	330, 750
Hsp92I	GRCGYC	2 cut(s)	204, 366
Hsp92II	CATG	5 cut(s)	124, 529, 769, 871, 1468
HspAI	GCGC	3 cut(s)	686, 963, 1634
Kpn2I	TCCGGA	1 cut(s)	690
KpnI	GGTACC	1 cut(s)	1370
KspAI	GTTAAC	1 cut(s)	577
Kzo9I	GATC	7 cut(s)	33, 408, 528, 669, 771, 1137, 1285
Lsp1109I	GCAGC	2 cut(s)	723, 966
LweI	GCATC	3 cut(s)	669, 717, 1066
MaeI	CTAG	2 cut(s)	1622, 1641
MaeII	ACGT	2 cut(s)	330, 750
MaeIII	GTNAC	3 cut(s)	560, 859, 1624
MalI	GATC	7 cut(s)	35, 410, 530, 671, 773, 1139, 1287
MbiI	CCGCTC	3 cut(s)	467, 814, 970
MboI	GATC	7 cut(s)	33, 408, 528, 669, 771, 1137, 1285
MboII	GAAGA	5 cut(s)	754, 1094, 1457, 1564, 1615
MlsI	TGGCCA	1 cut(s)	1176
MluCI	AATT	3 cut(s)	821, 1004, 1340
MluNI	TGGCCA	1 cut(s)	1176
MlyI	GAGTC	2 cut(s)	500, 790
MmeI	TCCRAC	2 cut(s)	888, 1362
Mox20I	TGGCCA	1 cut(s)	1176
MroI	TCCGGA	1 cut(s)	690
MroXI	GAANNNNTTC	1 cut(s)	71
MscI	TGGCCA	1 cut(s)	1176
MseI	TTAA	3 cut(s)	576, 1274, 1334
MslI	CAYNNNNRTG	1 cut(s)	872
Msp20I	TGGCCA	1 cut(s)	1176
MspA1I	CMGCKG	4 cut(s)	742, 886, 957, 1376
MspR9I	CCNGG	7 cut(s)	537, 626, 676, 707, 776, 1173, 1488
MvaI	CCWGG	2 cut(s)	1173, 1488
MvnI	CGCG	1 cut(s)	686
NciI	CCSGG	5 cut(s)	537, 626, 676, 707, 776
NcoI	CCATGG	1 cut(s)	1464
NdeII	GATC	7 cut(s)	33, 408, 528, 669, 771, 1137, 1285
NlaIII	CATG	5 cut(s)	124, 529, 769, 871, 1468
NlaIV	GGNNCC	4 cut(s)	541, 616, 699, 1368
NmeAIII	GCCGAG	3 cut(s)	31, 930, 951
NmuCI	GTSAC	1 cut(s)	859
NspI	RCATGY	1 cut(s)	871
NspV	TTCGAA	2 cut(s)	819, 825
PceI	AGGCCT	1 cut(s)	1163
PcsI	WCGNNNNNNNCGW	2 cut(s)	363, 510
PdmI	GAANNNNTTC	1 cut(s)	71
PfeI	GAWTC	4 cut(s)	1046, 1429, 1459, 1555
PflFI	GACNNNGTC	1 cut(s)	904
PflMI	CCANNNNNTGG	1 cut(s)	1154
PleI	GAGTC	2 cut(s)	500, 790
PmaCI	CACGTG	1 cut(s)	751
PmlI	CACGTG	1 cut(s)	751
PpsI	GAGTC	2 cut(s)	500, 790
Ppu21I	YACGTR	1 cut(s)	751
PpuMI	RGGWCCY	1 cut(s)	1202
Psp5II	RGGWCCY	1 cut(s)	1202
Psp6I	CCWGG	2 cut(s)	1171, 1486
PspCI	CACGTG	1 cut(s)	751
PspFI	CCCAGC	2 cut(s)	114, 1372
PspGI	CCWGG	2 cut(s)	1171, 1486
PspN4I	GGNNCC	4 cut(s)	541, 616, 699, 1368
PspPI	GGNCC	3 cut(s)	712, 777, 1202
PspPPI	RGGWCCY	1 cut(s)	1202
PstNI	CAGNNNCTG	2 cut(s)	1079, 1154
PsyI	GACNNNGTC	1 cut(s)	904
PvuII	CAGCTG	1 cut(s)	1376
RsaI	GTAC	5 cut(s)	172, 605, 1319, 1352, 1368
RsaNI	GTAC	5 cut(s)	171, 604, 1318, 1351, 1367
RseI	CAYNNNNRTG	1 cut(s)	872
SaqAI	TTAA	3 cut(s)	576, 1274, 1334
Sau3AI	GATC	7 cut(s)	33, 408, 528, 669, 771, 1137, 1285
Sau96I	GGNCC	3 cut(s)	712, 777, 1202
ScaI	AGTACT	1 cut(s)	172
SchI	GAGTC	2 cut(s)	500, 790
ScrFI	CCNGG	7 cut(s)	537, 626, 676, 707, 776, 1173, 1488
SfaNI	GCATC	3 cut(s)	669, 717, 1066
SfcI	CTRYAG	2 cut(s)	1104, 1509
SfuI	TTCGAA	2 cut(s)	819, 825
SgrAI	CRCCGGYG	1 cut(s)	788
SinI	GGWCC	2 cut(s)	712, 1202
SmiMI	CAYNNNNRTG	1 cut(s)	872
Sse9I	AATT	3 cut(s)	821, 1004, 1340
SseBI	AGGCCT	1 cut(s)	1163
SspMI	CTAG	2 cut(s)	1622, 1641
StuI	AGGCCT	1 cut(s)	1163
StyD4I	CCNGG	7 cut(s)	535, 624, 674, 705, 774, 1171, 1486
StyI	CCWWGG	3 cut(s)	480, 1254, 1464
TaiI	ACGT	2 cut(s)	333, 753
TaqI	TCGA	8 cut(s)	201, 402, 504, 531, 570, 725, 819, 825
TaqII	GACCGA	1 cut(s)	599
TasI	AATT	3 cut(s)	821, 1004, 1340
TatI	WGTACW	4 cut(s)	170, 603, 1317, 1350
TauI	GCSGC	8 cut(s)	222, 596, 742, 883, 886, 960, 963, 1113
TfiI	GAWTC	4 cut(s)	1046, 1429, 1459, 1555
Tru1I	TTAA	3 cut(s)	576, 1274, 1334
Tru9I	TTAA	3 cut(s)	576, 1274, 1334
TseFI	GTSAC	1 cut(s)	859
TseI	GCWGC	2 cut(s)	736, 954
Tsp45I	GTSAC	1 cut(s)	859
TspDTI	ATGAA	6 cut(s)	649, 754, 985, 1229, 1458, 1561
TspGWI	ACGGA	1 cut(s)	824
Tth111I	GACNNNGTC	1 cut(s)	904
Van91I	CCANNNNNTGG	1 cut(s)	1154
VpaK11BI	GGWCC	2 cut(s)	712, 1202
XapI	RAATTY	2 cut(s)	821, 1004
XceI	RCATGY	1 cut(s)	871
XmnI	GAANNNNTTC	1 cut(s)	71
XspI	CTAG	2 cut(s)	1622, 1641
ZrmI	AGTACT	1 cut(s)	172

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.